Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036330 | XP_013449825.1 | 97.248 | 218 | 6 | 0 | 1 | 218 | 1 | 218 | 1.24e-154 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036330 | sp|P13089|AUX28_SOYBN | 75.688 | 218 | 34 | 7 | 11 | 218 | 1 | 209 | 7.24e-105 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036330 | I3SRI4 | 97.248 | 218 | 6 | 0 | 1 | 218 | 1 | 218 | 5.93e-155 | 440 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1036330 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1036330 | Msa1076610 | 0.899130 | 2.687637e-77 | -8.615850e-47 |
| Msa1036330 | Msa1133640 | 0.920356 | 1.419507e-87 | -8.615850e-47 |
| Msa1036330 | Msa1373890 | 0.968453 | 1.064678e-128 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036330 | MtrunA17_Chr7g0260641 | 97.248 | 218 | 6 | 0 | 1 | 218 | 1 | 218 | 1.14e-158 | 440 |
| Msa1036330 | MtrunA17_Chr1g0184791 | 70.044 | 227 | 45 | 9 | 1 | 218 | 1 | 213 | 2.63e-97 | 285 |
| Msa1036330 | MtrunA17_Chr1g0187921 | 62.150 | 214 | 58 | 5 | 11 | 218 | 8 | 204 | 8.22e-78 | 235 |
| Msa1036330 | MtrunA17_Chr1g0190711 | 58.879 | 214 | 75 | 5 | 11 | 218 | 15 | 221 | 2.18e-72 | 221 |
| Msa1036330 | MtrunA17_Chr8g0366881 | 42.126 | 254 | 105 | 6 | 7 | 218 | 63 | 316 | 1.52e-50 | 169 |
| Msa1036330 | MtrunA17_Chr5g0428141 | 65.079 | 126 | 42 | 2 | 94 | 218 | 191 | 315 | 1.76e-50 | 168 |
| Msa1036330 | MtrunA17_Chr5g0411501 | 63.281 | 128 | 44 | 2 | 94 | 218 | 176 | 303 | 8.35e-50 | 166 |
| Msa1036330 | MtrunA17_Chr2g0331411 | 63.281 | 128 | 42 | 3 | 94 | 217 | 167 | 293 | 2.43e-49 | 165 |
| Msa1036330 | MtrunA17_Chr6g0486121 | 47.222 | 180 | 77 | 4 | 40 | 217 | 58 | 221 | 9.57e-47 | 156 |
| Msa1036330 | MtrunA17_Chr8g0390281 | 57.031 | 128 | 51 | 2 | 94 | 218 | 135 | 261 | 1.32e-45 | 154 |
| Msa1036330 | MtrunA17_Chr1g0187961 | 51.908 | 131 | 37 | 5 | 89 | 218 | 53 | 158 | 6.94e-38 | 131 |
| Msa1036330 | MtrunA17_Chr1g0166011 | 53.906 | 128 | 33 | 5 | 92 | 218 | 60 | 162 | 6.63e-37 | 129 |
| Msa1036330 | MtrunA17_Chr1g0184801 | 53.968 | 126 | 34 | 4 | 94 | 218 | 79 | 181 | 1.05e-36 | 129 |
| Msa1036330 | MtrunA17_Chr7g0260621 | 38.679 | 212 | 85 | 8 | 11 | 218 | 11 | 181 | 8.99e-35 | 124 |
| Msa1036330 | MtrunA17_Chr2g0332141 | 57.609 | 92 | 28 | 4 | 130 | 217 | 3 | 87 | 3.40e-26 | 99.0 |
| Msa1036330 | MtrunA17_Chr4g0004181 | 46.721 | 122 | 38 | 3 | 97 | 218 | 52 | 146 | 5.37e-25 | 97.8 |
| Msa1036330 | MtrunA17_Chr1g0183251 | 36.471 | 170 | 70 | 5 | 85 | 217 | 67 | 235 | 5.74e-22 | 92.0 |
| Msa1036330 | MtrunA17_Chr2g0330951 | 37.162 | 148 | 70 | 3 | 93 | 217 | 90 | 237 | 1.43e-20 | 88.2 |
| Msa1036330 | MtrunA17_Chr8g0340731 | 35.762 | 151 | 79 | 2 | 85 | 217 | 93 | 243 | 3.08e-20 | 87.0 |
| Msa1036330 | MtrunA17_Chr4g0069561 | 34.351 | 131 | 62 | 5 | 88 | 218 | 61 | 167 | 1.56e-13 | 67.0 |
| Msa1036330 | MtrunA17_Chr1g0193861 | 33.028 | 109 | 61 | 1 | 110 | 218 | 61 | 157 | 1.57e-13 | 67.0 |
| Msa1036330 | MtrunA17_Chr3g0137601 | 26.316 | 152 | 87 | 5 | 72 | 219 | 64 | 194 | 1.16e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036330 | AT4G14550.3 | 61.538 | 208 | 66 | 4 | 11 | 217 | 1 | 195 | 6.55e-78 | 234 |
| Msa1036330 | AT4G14550.1 | 61.538 | 208 | 66 | 4 | 11 | 217 | 1 | 195 | 1.43e-77 | 234 |
| Msa1036330 | AT4G14550.2 | 61.538 | 208 | 66 | 4 | 11 | 217 | 1 | 195 | 2.14e-77 | 234 |
| Msa1036330 | AT3G23050.2 | 56.951 | 223 | 63 | 7 | 11 | 218 | 6 | 210 | 3.44e-74 | 225 |
| Msa1036330 | AT3G23050.1 | 56.951 | 223 | 63 | 7 | 11 | 218 | 6 | 210 | 9.45e-74 | 225 |
| Msa1036330 | AT3G04730.1 | 55.605 | 223 | 64 | 6 | 11 | 218 | 2 | 204 | 4.43e-70 | 215 |
| Msa1036330 | AT1G04250.1 | 55.769 | 208 | 73 | 4 | 11 | 217 | 7 | 196 | 4.15e-69 | 213 |
| Msa1036330 | AT2G22670.5 | 43.295 | 261 | 89 | 10 | 3 | 218 | 41 | 287 | 6.33e-51 | 169 |
| Msa1036330 | AT2G22670.2 | 43.295 | 261 | 89 | 10 | 3 | 218 | 41 | 287 | 6.33e-51 | 169 |
| Msa1036330 | AT2G22670.3 | 43.295 | 261 | 89 | 10 | 3 | 218 | 41 | 287 | 6.59e-51 | 169 |
| Msa1036330 | AT2G22670.1 | 43.295 | 261 | 89 | 10 | 3 | 218 | 41 | 287 | 6.59e-51 | 169 |
| Msa1036330 | AT5G65670.1 | 64.800 | 125 | 42 | 1 | 96 | 218 | 180 | 304 | 6.97e-51 | 169 |
| Msa1036330 | AT5G65670.2 | 64.800 | 125 | 42 | 1 | 96 | 218 | 180 | 304 | 7.95e-51 | 169 |
| Msa1036330 | AT2G22670.4 | 43.295 | 261 | 89 | 10 | 3 | 218 | 58 | 304 | 8.27e-51 | 169 |
| Msa1036330 | AT4G29080.1 | 44.215 | 242 | 95 | 7 | 11 | 218 | 38 | 273 | 2.15e-50 | 167 |
| Msa1036330 | AT4G14550.4 | 56.707 | 164 | 57 | 4 | 11 | 173 | 1 | 151 | 1.45e-47 | 156 |
| Msa1036330 | AT3G23050.3 | 51.124 | 178 | 54 | 7 | 11 | 173 | 6 | 165 | 1.82e-43 | 145 |
| Msa1036330 | AT1G04240.1 | 40.476 | 210 | 78 | 5 | 9 | 218 | 3 | 165 | 3.98e-39 | 135 |
| Msa1036330 | AT5G43700.1 | 44.318 | 176 | 63 | 6 | 56 | 218 | 8 | 161 | 1.15e-38 | 133 |
| Msa1036330 | AT1G04240.2 | 40.476 | 210 | 78 | 5 | 9 | 218 | 103 | 265 | 2.87e-38 | 135 |
| Msa1036330 | AT3G23030.1 | 51.200 | 125 | 32 | 2 | 94 | 218 | 55 | 150 | 4.70e-36 | 126 |
| Msa1036330 | AT3G23030.2 | 51.200 | 125 | 32 | 2 | 94 | 218 | 142 | 237 | 2.94e-35 | 127 |
| Msa1036330 | AT3G15540.1 | 37.736 | 212 | 87 | 5 | 6 | 217 | 1 | 167 | 1.53e-32 | 118 |
| Msa1036330 | AT4G14560.1 | 50.781 | 128 | 34 | 4 | 92 | 218 | 48 | 147 | 7.92e-30 | 110 |
| Msa1036330 | AT1G52830.1 | 34.906 | 212 | 89 | 7 | 6 | 217 | 1 | 163 | 1.72e-28 | 107 |
| Msa1036330 | AT1G15580.1 | 35.238 | 210 | 63 | 7 | 10 | 218 | 7 | 144 | 3.24e-28 | 105 |
| Msa1036330 | AT1G04550.2 | 39.865 | 148 | 60 | 5 | 92 | 217 | 62 | 202 | 6.20e-25 | 99.4 |
| Msa1036330 | AT3G16500.1 | 40.244 | 164 | 68 | 6 | 72 | 217 | 84 | 235 | 3.09e-23 | 95.5 |
| Msa1036330 | AT3G16500.2 | 40.244 | 164 | 68 | 6 | 72 | 217 | 84 | 235 | 3.60e-23 | 95.5 |
| Msa1036330 | AT2G33310.3 | 38.621 | 145 | 63 | 5 | 94 | 217 | 70 | 209 | 7.26e-23 | 94.0 |
| Msa1036330 | AT2G33310.1 | 38.621 | 145 | 63 | 5 | 94 | 217 | 70 | 209 | 7.26e-23 | 94.0 |
| Msa1036330 | AT4G28640.1 | 39.706 | 136 | 64 | 3 | 98 | 217 | 87 | 220 | 4.88e-22 | 92.0 |
| Msa1036330 | AT4G28640.3 | 39.706 | 136 | 64 | 3 | 98 | 217 | 87 | 220 | 6.73e-22 | 91.7 |
| Msa1036330 | AT2G33310.2 | 37.333 | 150 | 68 | 5 | 89 | 217 | 66 | 210 | 7.59e-22 | 91.3 |
| Msa1036330 | AT4G28640.2 | 39.855 | 138 | 61 | 4 | 98 | 217 | 87 | 220 | 3.79e-21 | 90.5 |
| Msa1036330 | AT1G51950.1 | 39.865 | 148 | 56 | 5 | 96 | 217 | 93 | 233 | 6.74e-21 | 89.4 |
| Msa1036330 | AT1G04100.1 | 38.356 | 146 | 59 | 5 | 101 | 217 | 95 | 238 | 8.45e-20 | 86.3 |
| Msa1036330 | AT5G25890.1 | 35.503 | 169 | 86 | 5 | 50 | 218 | 2 | 147 | 1.34e-18 | 80.9 |
| Msa1036330 | AT3G17600.1 | 34.109 | 129 | 61 | 3 | 91 | 218 | 36 | 141 | 1.10e-17 | 78.2 |
| Msa1036330 | AT4G32280.1 | 25.843 | 178 | 79 | 6 | 72 | 217 | 70 | 226 | 8.07e-12 | 63.9 |
| Msa1036330 | AT2G46990.1 | 38.824 | 85 | 39 | 1 | 134 | 218 | 86 | 157 | 2.49e-11 | 61.2 |
| Msa1036330 | AT2G46990.2 | 38.824 | 85 | 39 | 1 | 134 | 218 | 86 | 157 | 2.62e-11 | 60.8 |
| Msa1036330 | AT3G62100.1 | 36.364 | 99 | 46 | 2 | 120 | 218 | 74 | 155 | 3.77e-11 | 60.8 |
| Msa1036330 | AT3G62100.2 | 36.364 | 99 | 46 | 2 | 120 | 218 | 74 | 155 | 3.88e-11 | 60.5 |
| Msa1036330 | AT4G32280.2 | 35.714 | 84 | 36 | 2 | 134 | 217 | 119 | 184 | 3.96e-11 | 61.2 |
| Msa1036330 | AT1G04550.1 | 35.849 | 106 | 46 | 3 | 92 | 175 | 62 | 167 | 7.48e-11 | 60.1 |
Find 80 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGTAATTGCATTGAAAT+TGG | 0.190674 | 7_1:-72682252 | None:intergenic |
| AGACTAGGAATTGGATTTCT+TGG | 0.218468 | 7_1:+72680215 | Msa1036330:CDS |
| ATTGGATTTCTTGGAAATAA+TGG | 0.230667 | 7_1:+72680224 | Msa1036330:CDS |
| ATGCAGAAGCCACGAATTAA+TGG | 0.238125 | 7_1:+72684880 | Msa1036330:three_prime_UTR |
| CCAAGTCTAACAACATAATT+TGG | 0.244651 | 7_1:-72685063 | None:intergenic |
| TACATTTGTGAAAGTTAGTA+TGG | 0.256580 | 7_1:+72682268 | Msa1036330:CDS |
| TGGTATGAAGAAGGAGAATA+TGG | 0.277842 | 7_1:+72680172 | Msa1036330:CDS |
| CAAACACACTAATAAGAAAT+AGG | 0.314082 | 7_1:-72685111 | None:intergenic |
| GATGCTTAATCTTTCCTCTA+AGG | 0.319822 | 7_1:+72680331 | Msa1036330:CDS |
| CATGAATGAGAGTAAGTTGA+TGG | 0.332793 | 7_1:+72682904 | Msa1036330:CDS |
| TGATGATGAAACAACTACTA+TGG | 0.333944 | 7_1:+72680304 | Msa1036330:CDS |
| TACTTTGCAGGAGGCTTGGC+AGG | 0.381666 | 7_1:-72680431 | None:intergenic |
| CTCAGCAGTAGCTTCCTTAG+AGG | 0.387015 | 7_1:-72680345 | None:intergenic |
| CCAAATTATGTTGTTAGACT+TGG | 0.399340 | 7_1:+72685063 | Msa1036330:three_prime_UTR |
| ACTGAGCTGAGACTAGGAAT+TGG | 0.412509 | 7_1:+72680206 | Msa1036330:CDS |
| GGAGGCTTGGCAGGATCTGC+AGG | 0.420503 | 7_1:-72680422 | None:intergenic |
| GTCACCATCCTTGTCTTCAT+AGG | 0.428945 | 7_1:-72682957 | None:intergenic |
| TCGCAGCTTTCTGATGCCTT+AGG | 0.429522 | 7_1:+72682341 | Msa1036330:CDS |
| TTGTTTAATAATTAATACTA+AGG | 0.436826 | 7_1:+72685135 | Msa1036330:three_prime_UTR |
| TACCAAAATATGACAAAAGA+TGG | 0.442557 | 7_1:-72684818 | None:intergenic |
| CTGCTATGTCCATTAATTCG+TGG | 0.448078 | 7_1:-72684889 | None:intergenic |
| CCATCCTTGTCTTCATAGGT+TGG | 0.449191 | 7_1:-72682953 | None:intergenic |
| TGGCAGGATCTGCAGGCAAA+AGG | 0.451959 | 7_1:-72680415 | None:intergenic |
| GCATTGCTAACATGTTCTTC+CGG | 0.452829 | 7_1:-72682199 | None:intergenic |
| TACTTACTTTGCAGGAGGCT+TGG | 0.454576 | 7_1:-72680435 | None:intergenic |
| TGGTGGGTTGGCCACCTGTC+CGG | 0.456500 | 7_1:+72682171 | Msa1036330:CDS |
| GAAGGAGAATATGGGATTTG+AGG | 0.458302 | 7_1:+72680181 | Msa1036330:CDS |
| GGGAAACTATAGTGTAGTAC+AGG | 0.467151 | 7_1:-72680034 | None:intergenic |
| CATCCTTGTCTTCATAGGTT+GGG | 0.472292 | 7_1:-72682952 | None:intergenic |
| TGCTTGTCGGTGACGTCCCA+TGG | 0.474826 | 7_1:+72682984 | Msa1036330:CDS |
| AAGTCTACTTTGCGGAGGTA+AGG | 0.481047 | 7_1:-72682299 | None:intergenic |
| CTGTGAATCTCAAGGAATGA+AGG | 0.485832 | 7_1:+72682877 | Msa1036330:CDS |
| CACGAATTAATGGACATAGC+AGG | 0.487651 | 7_1:+72684890 | Msa1036330:three_prime_UTR |
| GGCCACCTGTCCGGTCGTAC+CGG | 0.489448 | 7_1:+72682180 | Msa1036330:CDS |
| TTTGTGAAAGTTAGTATGGA+TGG | 0.492214 | 7_1:+72682272 | Msa1036330:CDS |
| AAACTCATCATGGAAGTTGT+TGG | 0.509341 | 7_1:+72680152 | Msa1036330:exon |
| GGCAGGATCTGCAGGCAAAA+GGG | 0.516414 | 7_1:-72680414 | None:intergenic |
| CAGCTACTGAAGGAGCTGTA+AGG | 0.531040 | 7_1:+72680255 | Msa1036330:CDS |
| GGAAGTTGTTGGTATGAAGA+AGG | 0.543101 | 7_1:+72680163 | Msa1036330:CDS |
| GAAATAATAATAGTGGTGGA+AGG | 0.545048 | 7_1:-72680055 | None:intergenic |
| ATAGTGTAGTACAGGGGCAA+GGG | 0.545810 | 7_1:-72680026 | None:intergenic |
| ACATGTTCTTCCGGTACGAC+CGG | 0.546140 | 7_1:-72682190 | None:intergenic |
| TGAATGATTTGTTTGCTATG+TGG | 0.547090 | 7_1:-72680077 | None:intergenic |
| TACAGCTCCTTCAGTAGCTG+TGG | 0.551148 | 7_1:-72680252 | None:intergenic |
| GATGGTGACTGGATGCTTGT+CGG | 0.553347 | 7_1:+72682971 | Msa1036330:CDS |
| TATGTATAGGGCTCAAGTGG+TGG | 0.554478 | 7_1:+72682154 | Msa1036330:intron |
| GAAGGAGCTGTAAGGAAGAG+AGG | 0.555584 | 7_1:+72680263 | Msa1036330:CDS |
| CTATGTGGAAATAATAATAG+TGG | 0.557616 | 7_1:-72680062 | None:intergenic |
| ATGTTCAGCTCCTTCACCAT+TGG | 0.558570 | 7_1:+72682368 | Msa1036330:CDS |
| ACAATTTCAAGTCTACTTTG+CGG | 0.559180 | 7_1:-72682307 | None:intergenic |
| TTAGTAACTATAAGCCAAGC+AGG | 0.566743 | 7_1:-72684841 | None:intergenic |
| TTCTTCCGGTACGACCGGAC+AGG | 0.571159 | 7_1:-72682185 | None:intergenic |
| GCTTGTCGGTGACGTCCCAT+GGG | 0.572642 | 7_1:+72682985 | Msa1036330:CDS |
| GAGGAAACTGAGCTGAGACT+AGG | 0.573433 | 7_1:+72680200 | Msa1036330:CDS |
| TGTGGAAATAATAATAGTGG+TGG | 0.573954 | 7_1:-72680059 | None:intergenic |
| AAAATTACTTACTTTGCAGG+AGG | 0.575368 | 7_1:-72680440 | None:intergenic |
| TTATTACGTACCAATGGTGA+AGG | 0.582410 | 7_1:-72682378 | None:intergenic |
| TATTTCAGCACCAAGAGCCA+TGG | 0.584136 | 7_1:+72684741 | Msa1036330:intron |
| TAAGGCAACTGTGAATCTCA+AGG | 0.584506 | 7_1:+72682869 | Msa1036330:intron |
| TATAGTGTAGTACAGGGGCA+AGG | 0.588322 | 7_1:-72680027 | None:intergenic |
| ACGAATTAATGGACATAGCA+GGG | 0.591977 | 7_1:+72684891 | Msa1036330:three_prime_UTR |
| ATAGGGCTCAAGTGGTGGGT+TGG | 0.593236 | 7_1:+72682159 | Msa1036330:intron |
| GGTATGAAGAAGGAGAATAT+GGG | 0.605300 | 7_1:+72680173 | Msa1036330:CDS |
| TAGTGTAGTACAGGGGCAAG+GGG | 0.606866 | 7_1:-72680025 | None:intergenic |
| ATGAAGACAAGGATGGTGAC+TGG | 0.608145 | 7_1:+72682960 | Msa1036330:CDS |
| GGATCAGCCACAGCTACTGA+AGG | 0.608178 | 7_1:+72680245 | Msa1036330:CDS |
| CATAGAAAGACTTACTCCCA+TGG | 0.609888 | 7_1:-72683001 | None:intergenic |
| AAATAATAATAGTGGTGGAA+GGG | 0.611024 | 7_1:-72680054 | None:intergenic |
| TTCCGGTACGACCGGACAGG+TGG | 0.611684 | 7_1:-72682182 | None:intergenic |
| ATGTATGTATAGGGCTCAAG+TGG | 0.612031 | 7_1:+72682151 | Msa1036330:intron |
| ATAGAAAGACTTACTCCCAT+GGG | 0.617476 | 7_1:-72683000 | None:intergenic |
| ATGACAAAAGATGGAGCAGG+TGG | 0.638402 | 7_1:-72684809 | None:intergenic |
| AATATGACAAAAGATGGAGC+AGG | 0.645066 | 7_1:-72684812 | None:intergenic |
| ATGTATAGGGCTCAAGTGGT+GGG | 0.646443 | 7_1:+72682155 | Msa1036330:intron |
| GGAAACTATAGTGTAGTACA+GGG | 0.649080 | 7_1:-72680033 | None:intergenic |
| CTCTAAGGAAGCTACTGCTG+AGG | 0.652011 | 7_1:+72680346 | Msa1036330:CDS |
| ATTTCAAGTCTACTTTGCGG+AGG | 0.653195 | 7_1:-72682304 | None:intergenic |
| TGTCCCAACCTATGAAGACA+AGG | 0.658762 | 7_1:+72682949 | Msa1036330:CDS |
| CCAACCTATGAAGACAAGGA+TGG | 0.661428 | 7_1:+72682953 | Msa1036330:CDS |
| GAAACTATAGTGTAGTACAG+GGG | 0.760847 | 7_1:-72680032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATTTAAGAAAGA+TGG | + | chr7_1:72680806-72680825 | Msa1036330:intron | 10.0% |
| !!! | TTCTTTTAATATAAAAATAC+TGG | + | chr7_1:72681332-72681351 | Msa1036330:intron | 10.0% |
| !!! | AACTTATATTTATAGATTTT+TGG | + | chr7_1:72681618-72681637 | Msa1036330:intron | 10.0% |
| !!! | ACTTATATTTATAGATTTTT+GGG | + | chr7_1:72681619-72681638 | Msa1036330:intron | 10.0% |
| !! | ACTTATTTAAAAAAAATGTT+TGG | - | chr7_1:72681851-72681870 | None:intergenic | 10.0% |
| !! | AATTTACCAAATTTATTATT+AGG | - | chr7_1:72681915-72681934 | None:intergenic | 10.0% |
| !!! | CATTTTATTTTATTTTCTAA+TGG | + | chr7_1:72683044-72683063 | Msa1036330:intron | 10.0% |
| !! | TATAAAATTAATATATTTGC+GGG | + | chr7_1:72683263-72683282 | Msa1036330:intron | 10.0% |
| !! | CAAAAAATTAAAAATATAGT+GGG | - | chr7_1:72683376-72683395 | None:intergenic | 10.0% |
| !! | ACAAAAAATTAAAAATATAG+TGG | - | chr7_1:72683377-72683396 | None:intergenic | 10.0% |
| !! | TAATTATATTAATCATTAAC+GGG | + | chr7_1:72683484-72683503 | Msa1036330:intron | 10.0% |
| !! | TAAAGTTATAGAAAATTTAA+AGG | - | chr7_1:72683780-72683799 | None:intergenic | 10.0% |
| !!! | GAATTATTATATTTTCAATT+TGG | + | chr7_1:72683868-72683887 | Msa1036330:intron | 10.0% |
| !! | TAAAATAAAAGTTATATGTT+TGG | + | chr7_1:72684085-72684104 | Msa1036330:intron | 10.0% |
| !! | ATATTATCATAAATAATGTA+AGG | - | chr7_1:72684154-72684173 | None:intergenic | 10.0% |
| !!! | TTTTTTACTAAATTATTACA+AGG | + | chr7_1:72684376-72684395 | Msa1036330:intron | 10.0% |
| !!! | TTTTTACTAAATTATTACAA+GGG | + | chr7_1:72684377-72684396 | Msa1036330:intron | 10.0% |
| !! | TTGTTTAATAATTAATACTA+AGG | + | chr7_1:72685135-72685154 | Msa1036330:three_prime_UTR | 10.0% |
| !!! | AATCAAAATTTTTTTTTTGG+AGG | + | chr7_1:72680464-72680483 | Msa1036330:intron | 15.0% |
| !! | TAAAAAATTCCAAGATATAT+AGG | + | chr7_1:72680616-72680635 | Msa1036330:intron | 15.0% |
| !! | ATCATATTCAAATTCAAATT+TGG | + | chr7_1:72680743-72680762 | Msa1036330:intron | 15.0% |
| !! | CTTAAATAAAAAAAAAATGG+TGG | - | chr7_1:72680801-72680820 | None:intergenic | 15.0% |
| !!! | AATTATATTCTTCTGAAATA+TGG | + | chr7_1:72681027-72681046 | Msa1036330:intron | 15.0% |
| !! | TAAGAATAAATAAATAGATC+CGG | + | chr7_1:72681483-72681502 | Msa1036330:intron | 15.0% |
| !!! | TTTTTTATAATTTTTCTGAC+CGG | - | chr7_1:72681505-72681524 | None:intergenic | 15.0% |
| !!! | AGTTTACTAAATTTTATTTC+TGG | + | chr7_1:72681679-72681698 | Msa1036330:intron | 15.0% |
| !! | AGAAAAAAAAATCAAAGAAA+AGG | + | chr7_1:72681728-72681747 | Msa1036330:intron | 15.0% |
| !! | GAAAAAAAAATCAAAGAAAA+GGG | + | chr7_1:72681729-72681748 | Msa1036330:intron | 15.0% |
| !! | TAAAAAATAGAGATTATAAC+AGG | - | chr7_1:72681802-72681821 | None:intergenic | 15.0% |
| !!! | TGTTATAATCTCTATTTTTT+AGG | + | chr7_1:72681801-72681820 | Msa1036330:intron | 15.0% |
| !! | ATTTACATTTGTATATTTCA+AGG | + | chr7_1:72681880-72681899 | Msa1036330:intron | 15.0% |
| !! | GTTATTCCTAATAATAAATT+TGG | + | chr7_1:72681906-72681925 | Msa1036330:intron | 15.0% |
| !!! | AACAAACACATATTTTATTT+TGG | + | chr7_1:72681938-72681957 | Msa1036330:intron | 15.0% |
| !! | GGATTAATGTTATATATATA+TGG | + | chr7_1:72681959-72681978 | Msa1036330:intron | 15.0% |
| !!! | TTCAATATATAATTTGTTTG+GGG | - | chr7_1:72681992-72682011 | None:intergenic | 15.0% |
| !!! | CTTCAATATATAATTTGTTT+GGG | - | chr7_1:72681993-72682012 | None:intergenic | 15.0% |
| !!! | ACTTCAATATATAATTTGTT+TGG | - | chr7_1:72681994-72682013 | None:intergenic | 15.0% |
| !!! | TATCTTATTTGATTCTTTAA+AGG | + | chr7_1:72683218-72683237 | Msa1036330:intron | 15.0% |
| !!! | ATCTTATTTGATTCTTTAAA+GGG | + | chr7_1:72683219-72683238 | Msa1036330:intron | 15.0% |
| !!! | ATTATATAATGAGCTTTTTT+AGG | + | chr7_1:72683459-72683478 | Msa1036330:intron | 15.0% |
| !!! | TTATCATTTTTTTGATGTAT+TGG | - | chr7_1:72684178-72684197 | None:intergenic | 15.0% |
| !! | TATAAAAGTTACAATGAAAA+AGG | - | chr7_1:72684209-72684228 | None:intergenic | 15.0% |
| !!! | TTTTATATGATTAGTCAAAT+CGG | + | chr7_1:72684222-72684241 | Msa1036330:intron | 15.0% |
| !!! | TTTAAAACAGCAAAATATAT+AGG | - | chr7_1:72684324-72684343 | None:intergenic | 15.0% |
| !!! | TTTTATTGAAGAAGATTATA+AGG | + | chr7_1:72684410-72684429 | Msa1036330:intron | 15.0% |
| !! | TTTATTGAAGAAGATTATAA+GGG | + | chr7_1:72684411-72684430 | Msa1036330:intron | 15.0% |
| !! | TTTAATTACAAATGAAATGA+GGG | - | chr7_1:72684621-72684640 | None:intergenic | 15.0% |
| !!! | TTTTTGATAAAATTGTTCTA+TGG | + | chr7_1:72684956-72684975 | Msa1036330:three_prime_UTR | 15.0% |
| !! | TTAAAAATTACTTACTTTGC+AGG | - | chr7_1:72680446-72680465 | None:intergenic | 20.0% |
| !! | ATTAAATAGAAACTTTCCTA+TGG | - | chr7_1:72681211-72681230 | None:intergenic | 20.0% |
| !! | TAACAGATAACGTAAAATAT+TGG | + | chr7_1:72681301-72681320 | Msa1036330:intron | 20.0% |
| !!! | AAAGCAGACATATATTTTTT+TGG | - | chr7_1:72681572-72681591 | None:intergenic | 20.0% |
| !!! | ATTTTAAGACTACATATTCA+TGG | - | chr7_1:72682110-72682129 | None:intergenic | 20.0% |
| !! | ATTAATGTGTATGTATGTAT+AGG | + | chr7_1:72682141-72682160 | Msa1036330:intron | 20.0% |
| !! | TTAATGTGTATGTATGTATA+GGG | + | chr7_1:72682142-72682161 | Msa1036330:intron | 20.0% |
| !! | AAATGTAATTGCATTGAAAT+TGG | - | chr7_1:72682255-72682274 | None:intergenic | 20.0% |
| !!! | TTATTTTCAATCTCATTTGT+CGG | - | chr7_1:72682463-72682482 | None:intergenic | 20.0% |
| !!! | AACTGTTTAGAACAATTTTA+CGG | + | chr7_1:72682668-72682687 | Msa1036330:intron | 20.0% |
| !!! | TAGTATATATTTTGTTTGAG+TGG | - | chr7_1:72682763-72682782 | None:intergenic | 20.0% |
| !!! | ATTACATTAAAAACCCTTTT+GGG | - | chr7_1:72682800-72682819 | None:intergenic | 20.0% |
| !! | ATTAATTCTGTGTTTATGTA+AGG | + | chr7_1:72682851-72682870 | Msa1036330:intron | 20.0% |
| !! | AAAAATCTAATTAAGGATGT+GGG | - | chr7_1:72683563-72683582 | None:intergenic | 20.0% |
| !! | AGGATTCAAAAATCTAATTA+AGG | - | chr7_1:72683570-72683589 | None:intergenic | 20.0% |
| !! | AGAAAATTTAAAGGATATTG+AGG | - | chr7_1:72683771-72683790 | None:intergenic | 20.0% |
| !! | GAAGTCAAAAATTAAACTTA+AGG | - | chr7_1:72683897-72683916 | None:intergenic | 20.0% |
| !! | TGCACATTAATTAATGTAAT+TGG | + | chr7_1:72684255-72684274 | Msa1036330:intron | 20.0% |
| !!! | GTTTAAGTTTAACTAGTTAT+TGG | + | chr7_1:72684433-72684452 | Msa1036330:intron | 20.0% |
| !! | GTTTAATTACAAATGAAATG+AGG | - | chr7_1:72684622-72684641 | None:intergenic | 20.0% |
| !!! | TTGATTTGTGTAATGTTTTA+TGG | + | chr7_1:72684926-72684945 | Msa1036330:three_prime_UTR | 20.0% |
| !! | AAATAATAATAGTGGTGGAA+GGG | - | chr7_1:72680057-72680076 | None:intergenic | 25.0% |
| ! | CTATGTGGAAATAATAATAG+TGG | - | chr7_1:72680065-72680084 | None:intergenic | 25.0% |
| ! | ATTGGATTTCTTGGAAATAA+TGG | + | chr7_1:72680224-72680243 | Msa1036330:CDS | 25.0% |
| ! | AAAATTCCAAGATATATAGG+AGG | + | chr7_1:72680619-72680638 | Msa1036330:intron | 25.0% |
| !!! | ACATCTTGATTTTTTTTCTC+TGG | - | chr7_1:72680648-72680667 | None:intergenic | 25.0% |
| ! | GAACTAGTTATATGCAAATT+AGG | + | chr7_1:72680681-72680700 | Msa1036330:intron | 25.0% |
| ! | TACATTGTGCAACATAAAAA+TGG | + | chr7_1:72681063-72681082 | Msa1036330:intron | 25.0% |
| ! | ACAAACTTGAAACAATTCAA+TGG | - | chr7_1:72681157-72681176 | None:intergenic | 25.0% |
| !!! | ATTGAATTGTTTCAAGTTTG+TGG | + | chr7_1:72681156-72681175 | Msa1036330:intron | 25.0% |
| ! | ACACTCCATAAAATGTTATT+GGG | + | chr7_1:72681702-72681721 | Msa1036330:intron | 25.0% |
| !! | CTATTCCCAATAACATTTTA+TGG | - | chr7_1:72681710-72681729 | None:intergenic | 25.0% |
| ! | AAAAAAATCAAAGAAAAGGG+TGG | + | chr7_1:72681732-72681751 | Msa1036330:intron | 25.0% |
| ! | AAAAAATCAAAGAAAAGGGT+GGG | + | chr7_1:72681733-72681752 | Msa1036330:intron | 25.0% |
| !!! | TCTCTATTTTTTAGGTTCTT+CGG | + | chr7_1:72681809-72681828 | Msa1036330:intron | 25.0% |
| ! | TACATTTGTGAAAGTTAGTA+TGG | + | chr7_1:72682268-72682287 | Msa1036330:CDS | 25.0% |
| ! | ATGAATTTATTACGTACCAA+TGG | - | chr7_1:72682387-72682406 | None:intergenic | 25.0% |
| !!! | ACTGTTTAGAACAATTTTAC+GGG | + | chr7_1:72682669-72682688 | Msa1036330:intron | 25.0% |
| !! | CATTACATTAAAAACCCTTT+TGG | - | chr7_1:72682801-72682820 | None:intergenic | 25.0% |
| !! | TATTTTCTAATGGAAGTCAA+CGG | + | chr7_1:72683054-72683073 | Msa1036330:intron | 25.0% |
| ! | ATTAATATATTTGCGGGAAT+TGG | + | chr7_1:72683269-72683288 | Msa1036330:intron | 25.0% |
| ! | TATTTACTTGTAAGCAAAGA+TGG | + | chr7_1:72683321-72683340 | Msa1036330:intron | 25.0% |
| ! | CAAAAATCTAATTAAGGATG+TGG | - | chr7_1:72683564-72683583 | None:intergenic | 25.0% |
| !!! | TTTTGCTATAAGTCATTCTA+TGG | + | chr7_1:72683741-72683760 | Msa1036330:intron | 25.0% |
| ! | GAAAAAGTTAGCACAATATA+AGG | - | chr7_1:72684046-72684065 | None:intergenic | 25.0% |
| !! | ATATGTTTGGTGAAATCTTT+CGG | + | chr7_1:72684098-72684117 | Msa1036330:intron | 25.0% |
| ! | GTTTAACTAGTTATTGGTAT+AGG | + | chr7_1:72684439-72684458 | Msa1036330:intron | 25.0% |
| ! | TGAAATTTACTTCTTGCAAA+TGG | - | chr7_1:72684590-72684609 | None:intergenic | 25.0% |
| ! | TAAACACTTGACTAAATAGA+AGG | - | chr7_1:72684644-72684663 | None:intergenic | 25.0% |
| ! | TACCAAAATATGACAAAAGA+TGG | - | chr7_1:72684821-72684840 | None:intergenic | 25.0% |
| ! | CAAACACACTAATAAGAAAT+AGG | - | chr7_1:72685114-72685133 | None:intergenic | 25.0% |
| ! | GAAATAATAATAGTGGTGGA+AGG | - | chr7_1:72680058-72680077 | None:intergenic | 30.0% |
| TGTGGAAATAATAATAGTGG+TGG | - | chr7_1:72680062-72680081 | None:intergenic | 30.0% | |
| !! | TGAATGATTTGTTTGCTATG+TGG | - | chr7_1:72680080-72680099 | None:intergenic | 30.0% |
| ! | TGATGATGAAACAACTACTA+TGG | + | chr7_1:72680304-72680323 | Msa1036330:CDS | 30.0% |
| AAAATTACTTACTTTGCAGG+AGG | - | chr7_1:72680443-72680462 | None:intergenic | 30.0% | |
| TCATTTATGAACCACTTATG+TGG | + | chr7_1:72680533-72680552 | Msa1036330:intron | 30.0% | |
| ATAGCACATGTACAAATTCA+TGG | + | chr7_1:72680882-72680901 | Msa1036330:intron | 30.0% | |
| AAGTTTGTGGTGATACATTA+TGG | + | chr7_1:72681169-72681188 | Msa1036330:intron | 30.0% | |
| ATATCATGCTATGACTAATG+AGG | - | chr7_1:72681236-72681255 | None:intergenic | 30.0% | |
| !!! | GCAGACATATATTTTTTTGG+TGG | - | chr7_1:72681569-72681588 | None:intergenic | 30.0% |
| GACACTCCATAAAATGTTAT+TGG | + | chr7_1:72681701-72681720 | Msa1036330:intron | 30.0% | |
| TTTGTGAAAGTTAGTATGGA+TGG | + | chr7_1:72682272-72682291 | Msa1036330:CDS | 30.0% | |
| ! | ACAATTTCAAGTCTACTTTG+CGG | - | chr7_1:72682310-72682329 | None:intergenic | 30.0% |
| CAAAAACAAAGGTAAAACTG+AGG | - | chr7_1:72682420-72682439 | None:intergenic | 30.0% | |
| ! | CTAGTTCTCTACAAAAACAA+AGG | - | chr7_1:72682431-72682450 | None:intergenic | 30.0% |
| GACAACCAAAATATTGGTAA+GGG | + | chr7_1:72682691-72682710 | Msa1036330:intron | 30.0% | |
| ! | TTCTTCCCTTACCAATATTT+TGG | - | chr7_1:72682699-72682718 | None:intergenic | 30.0% |
| TTTCAAACGAATTTGCATTG+AGG | - | chr7_1:72683590-72683609 | None:intergenic | 30.0% | |
| !!! | CGGTTTTAAAAAATTTCGAG+AGG | + | chr7_1:72683935-72683954 | Msa1036330:intron | 30.0% |
| TTACTACACCACATATACAA+GGG | - | chr7_1:72683973-72683992 | None:intergenic | 30.0% | |
| TTTACTACACCACATATACA+AGG | - | chr7_1:72683974-72683993 | None:intergenic | 30.0% | |
| GGTGTAGTAAATGATATATC+TGG | + | chr7_1:72683983-72684002 | Msa1036330:intron | 30.0% | |
| ! | CTCCATCTTTTGTCATATTT+TGG | + | chr7_1:72684816-72684835 | Msa1036330:CDS | 30.0% |
| CCAAGTCTAACAACATAATT+TGG | - | chr7_1:72685066-72685085 | None:intergenic | 30.0% | |
| CCAAATTATGTTGTTAGACT+TGG | + | chr7_1:72685063-72685082 | Msa1036330:three_prime_UTR | 30.0% | |
| GAAACTATAGTGTAGTACAG+GGG | - | chr7_1:72680035-72680054 | None:intergenic | 35.0% | |
| GGAAACTATAGTGTAGTACA+GGG | - | chr7_1:72680036-72680055 | None:intergenic | 35.0% | |
| AGAGAGTGAAAAACTCATCA+TGG | + | chr7_1:72680142-72680161 | Msa1036330:exon | 35.0% | |
| AAACTCATCATGGAAGTTGT+TGG | + | chr7_1:72680152-72680171 | Msa1036330:exon | 35.0% | |
| TGGTATGAAGAAGGAGAATA+TGG | + | chr7_1:72680172-72680191 | Msa1036330:CDS | 35.0% | |
| GGTATGAAGAAGGAGAATAT+GGG | + | chr7_1:72680173-72680192 | Msa1036330:CDS | 35.0% | |
| AGACTAGGAATTGGATTTCT+TGG | + | chr7_1:72680215-72680234 | Msa1036330:CDS | 35.0% | |
| GATGCTTAATCTTTCCTCTA+AGG | + | chr7_1:72680331-72680350 | Msa1036330:CDS | 35.0% | |
| ! | CTTCTCTTTTTGCAAAGTCT+TGG | - | chr7_1:72680393-72680412 | None:intergenic | 35.0% |
| TGGTTTCCTCCTATATATCT+TGG | - | chr7_1:72680628-72680647 | None:intergenic | 35.0% | |
| ! | AGTTTGTGTTGTTAACTGTG+TGG | - | chr7_1:72680710-72680729 | None:intergenic | 35.0% |
| GAGACATATAGATCAGAAGA+TGG | + | chr7_1:72680941-72680960 | Msa1036330:intron | 35.0% | |
| ATACACATGTGCATAGCATA+TGG | - | chr7_1:72682069-72682088 | None:intergenic | 35.0% | |
| TTATTACGTACCAATGGTGA+AGG | - | chr7_1:72682381-72682400 | None:intergenic | 35.0% | |
| TTACGGGACAACCAAAATAT+TGG | + | chr7_1:72682685-72682704 | Msa1036330:intron | 35.0% | |
| GGACAACCAAAATATTGGTA+AGG | + | chr7_1:72682690-72682709 | Msa1036330:intron | 35.0% | |
| TCAACATTAGTTGTCCCAAA+AGG | + | chr7_1:72682783-72682802 | Msa1036330:intron | 35.0% | |
| CAACATTAGTTGTCCCAAAA+GGG | + | chr7_1:72682784-72682803 | Msa1036330:intron | 35.0% | |
| ! | CATGAATGAGAGTAAGTTGA+TGG | + | chr7_1:72682904-72682923 | Msa1036330:CDS | 35.0% |
| ATAGAAAGACTTACTCCCAT+GGG | - | chr7_1:72683003-72683022 | None:intergenic | 35.0% | |
| !! | GAATCTTTGGTAGTGTATGA+GGG | - | chr7_1:72683651-72683670 | None:intergenic | 35.0% |
| !! | TGAATCTTTGGTAGTGTATG+AGG | - | chr7_1:72683652-72683671 | None:intergenic | 35.0% |
| ATCACAAATGCAGATGTAGA+AGG | - | chr7_1:72683705-72683724 | None:intergenic | 35.0% | |
| TAGACAAACCCTTGTATATG+TGG | + | chr7_1:72683962-72683981 | Msa1036330:intron | 35.0% | |
| ! | TATAAGGTGTCATAAGCACA+TGG | - | chr7_1:72684030-72684049 | None:intergenic | 35.0% |
| AAACGTTTGCGTATCATGAA+AGG | + | chr7_1:72684517-72684536 | Msa1036330:intron | 35.0% | |
| TTTGCGTATCATGAAAGGAA+AGG | + | chr7_1:72684522-72684541 | Msa1036330:intron | 35.0% | |
| AATATGACAAAAGATGGAGC+AGG | - | chr7_1:72684815-72684834 | None:intergenic | 35.0% | |
| TTAGTAACTATAAGCCAAGC+AGG | - | chr7_1:72684844-72684863 | None:intergenic | 35.0% | |
| ! | ACGAATTAATGGACATAGCA+GGG | + | chr7_1:72684891-72684910 | Msa1036330:three_prime_UTR | 35.0% |
| GGGAAACTATAGTGTAGTAC+AGG | - | chr7_1:72680037-72680056 | None:intergenic | 40.0% | |
| GGAAGTTGTTGGTATGAAGA+AGG | + | chr7_1:72680163-72680182 | Msa1036330:CDS | 40.0% | |
| GAAGGAGAATATGGGATTTG+AGG | + | chr7_1:72680181-72680200 | Msa1036330:CDS | 40.0% | |
| !!! | GTCTTGGTGGTTTTATCACT+TGG | - | chr7_1:72680377-72680396 | None:intergenic | 40.0% |
| ! | CTCTTTTTGCAAAGTCTTGG+TGG | - | chr7_1:72680390-72680409 | None:intergenic | 40.0% |
| AAGTCACTCTACCACATAAG+TGG | - | chr7_1:72680547-72680566 | None:intergenic | 40.0% | |
| ACTATGATGCAGTACACCAT+AGG | + | chr7_1:72681192-72681211 | Msa1036330:intron | 40.0% | |
| !! | GTCTGCTTTTGTAAGAGCTT+AGG | + | chr7_1:72681583-72681602 | Msa1036330:intron | 40.0% |
| ATGTATGTATAGGGCTCAAG+TGG | + | chr7_1:72682151-72682170 | Msa1036330:intron | 40.0% | |
| GCATTGCTAACATGTTCTTC+CGG | - | chr7_1:72682202-72682221 | None:intergenic | 40.0% | |
| ! | ATTTCAAGTCTACTTTGCGG+AGG | - | chr7_1:72682307-72682326 | None:intergenic | 40.0% |
| AGGGAAGAATAAAGATCTCG+AGG | + | chr7_1:72682710-72682729 | Msa1036330:intron | 40.0% | |
| TAAGGCAACTGTGAATCTCA+AGG | + | chr7_1:72682869-72682888 | Msa1036330:intron | 40.0% | |
| CTGTGAATCTCAAGGAATGA+AGG | + | chr7_1:72682877-72682896 | Msa1036330:CDS | 40.0% | |
| CATCCTTGTCTTCATAGGTT+GGG | - | chr7_1:72682955-72682974 | None:intergenic | 40.0% | |
| CATAGAAAGACTTACTCCCA+TGG | - | chr7_1:72683004-72683023 | None:intergenic | 40.0% | |
| TAAGCAAAGATGGAGCTAGA+AGG | + | chr7_1:72683331-72683350 | Msa1036330:intron | 40.0% | |
| AAGCAAAGATGGAGCTAGAA+GGG | + | chr7_1:72683332-72683351 | Msa1036330:intron | 40.0% | |
| AATCGTGAGCAGTGAATCTT+TGG | - | chr7_1:72683664-72683683 | None:intergenic | 40.0% | |
| TTCACTGCTCACGATTTCAT+CGG | + | chr7_1:72683668-72683687 | Msa1036330:intron | 40.0% | |
| ! | GGTGTCATAACTTATGCACA+TGG | - | chr7_1:72684133-72684152 | None:intergenic | 40.0% |
| !! | CTCTGGTTAGGTCTTGTTAT+CGG | + | chr7_1:72684286-72684305 | Msa1036330:intron | 40.0% |
| ATAGGCTTAGCACTCTAACA+TGG | + | chr7_1:72684457-72684476 | Msa1036330:intron | 40.0% | |
| GCATGATTCAACAAACATCC+TGG | - | chr7_1:72684497-72684516 | None:intergenic | 40.0% | |
| ATGAAAGGAAAGGAGGCTAT+TGG | + | chr7_1:72684532-72684551 | Msa1036330:intron | 40.0% | |
| ! | TTGCATTTTTCCATGGCTCT+TGG | - | chr7_1:72684754-72684773 | None:intergenic | 40.0% |
| ! | CCTGTTCTTGCATTTTTCCA+TGG | - | chr7_1:72684761-72684780 | None:intergenic | 40.0% |
| CCATGGAAAAATGCAAGAAC+AGG | + | chr7_1:72684758-72684777 | Msa1036330:CDS | 40.0% | |
| !!! | GTCATATTTTGGTACCTGCT+TGG | + | chr7_1:72684827-72684846 | Msa1036330:CDS | 40.0% |
| ATGCAGAAGCCACGAATTAA+TGG | + | chr7_1:72684880-72684899 | Msa1036330:three_prime_UTR | 40.0% | |
| CTGCTATGTCCATTAATTCG+TGG | - | chr7_1:72684892-72684911 | None:intergenic | 40.0% | |
| ! | CACGAATTAATGGACATAGC+AGG | + | chr7_1:72684890-72684909 | Msa1036330:three_prime_UTR | 40.0% |
| ATAGTGTAGTACAGGGGCAA+GGG | - | chr7_1:72680029-72680048 | None:intergenic | 45.0% | |
| TATAGTGTAGTACAGGGGCA+AGG | - | chr7_1:72680030-72680049 | None:intergenic | 45.0% | |
| ACTGAGCTGAGACTAGGAAT+TGG | + | chr7_1:72680206-72680225 | Msa1036330:CDS | 45.0% | |
| TACTTACTTTGCAGGAGGCT+TGG | - | chr7_1:72680438-72680457 | None:intergenic | 45.0% | |
| ATTTGTCCCACATGCCTAGT+CGG | + | chr7_1:72681110-72681129 | Msa1036330:intron | 45.0% | |
| CTATAACCGACTAGGCATGT+GGG | - | chr7_1:72681119-72681138 | None:intergenic | 45.0% | |
| TCTATAACCGACTAGGCATG+TGG | - | chr7_1:72681120-72681139 | None:intergenic | 45.0% | |
| ACATGCCTAGTCGGTTATAG+AGG | + | chr7_1:72681119-72681138 | Msa1036330:intron | 45.0% | |
| TATGTATAGGGCTCAAGTGG+TGG | + | chr7_1:72682154-72682173 | Msa1036330:intron | 45.0% | |
| ATGTATAGGGCTCAAGTGGT+GGG | + | chr7_1:72682155-72682174 | Msa1036330:intron | 45.0% | |
| AAGTCTACTTTGCGGAGGTA+AGG | - | chr7_1:72682302-72682321 | None:intergenic | 45.0% | |
| ! | GGAGCTGAACATTTTGCCTA+AGG | - | chr7_1:72682360-72682379 | None:intergenic | 45.0% |
| ATGTTCAGCTCCTTCACCAT+TGG | + | chr7_1:72682368-72682387 | Msa1036330:CDS | 45.0% | |
| TGTCCCAACCTATGAAGACA+AGG | + | chr7_1:72682949-72682968 | Msa1036330:CDS | 45.0% | |
| CCATCCTTGTCTTCATAGGT+TGG | - | chr7_1:72682956-72682975 | None:intergenic | 45.0% | |
| CCAACCTATGAAGACAAGGA+TGG | + | chr7_1:72682953-72682972 | Msa1036330:CDS | 45.0% | |
| GTCACCATCCTTGTCTTCAT+AGG | - | chr7_1:72682960-72682979 | None:intergenic | 45.0% | |
| ATGAAGACAAGGATGGTGAC+TGG | + | chr7_1:72682960-72682979 | Msa1036330:CDS | 45.0% | |
| TGACTTCGTACCGTCTTGTA+AGG | + | chr7_1:72683910-72683929 | Msa1036330:intron | 45.0% | |
| GACTTCGTACCGTCTTGTAA+GGG | + | chr7_1:72683911-72683930 | Msa1036330:intron | 45.0% | |
| ACTTCGTACCGTCTTGTAAG+GGG | + | chr7_1:72683912-72683931 | Msa1036330:intron | 45.0% | |
| TAAAACCGCCCCTTACAAGA+CGG | - | chr7_1:72683923-72683942 | None:intergenic | 45.0% | |
| AACAAGACCTAACCAGAGCA+GGG | - | chr7_1:72684284-72684303 | None:intergenic | 45.0% | |
| TAACAAGACCTAACCAGAGC+AGG | - | chr7_1:72684285-72684304 | None:intergenic | 45.0% | |
| !! | GTTAGGTCTTGTTATCGGAG+TGG | + | chr7_1:72684291-72684310 | Msa1036330:intron | 45.0% |
| ATGGACTCTTCATGTCAACC+AGG | + | chr7_1:72684476-72684495 | Msa1036330:intron | 45.0% | |
| GCGTATCATGAAAGGAAAGG+AGG | + | chr7_1:72684525-72684544 | Msa1036330:intron | 45.0% | |
| GGAAAGGAGGCTATTGGTAT+AGG | + | chr7_1:72684538-72684557 | Msa1036330:intron | 45.0% | |
| TATTTCAGCACCAAGAGCCA+TGG | + | chr7_1:72684741-72684760 | Msa1036330:intron | 45.0% | |
| ATGACAAAAGATGGAGCAGG+TGG | - | chr7_1:72684812-72684831 | None:intergenic | 45.0% | |
| !!! | TTTAATCAAAATTTTTTTTT+TGG | + | chr7_1:72680461-72680480 | Msa1036330:intron | 5.0% |
| !! | TTTCTTAAATAAAAAAAAAA+TGG | - | chr7_1:72680804-72680823 | None:intergenic | 5.0% |
| !! | AATTATATTTACAATAATTA+TGG | - | chr7_1:72682031-72682050 | None:intergenic | 5.0% |
| !! | TTATAAAATTAATATATTTG+CGG | + | chr7_1:72683262-72683281 | Msa1036330:intron | 5.0% |
| !! | TTAATTATATTAATCATTAA+CGG | + | chr7_1:72683483-72683502 | Msa1036330:intron | 5.0% |
| TAGTGTAGTACAGGGGCAAG+GGG | - | chr7_1:72680028-72680047 | None:intergenic | 50.0% | |
| GAGGAAACTGAGCTGAGACT+AGG | + | chr7_1:72680200-72680219 | Msa1036330:CDS | 50.0% | |
| TACAGCTCCTTCAGTAGCTG+TGG | - | chr7_1:72680255-72680274 | None:intergenic | 50.0% | |
| CAGCTACTGAAGGAGCTGTA+AGG | + | chr7_1:72680255-72680274 | Msa1036330:CDS | 50.0% | |
| GAAGGAGCTGTAAGGAAGAG+AGG | + | chr7_1:72680263-72680282 | Msa1036330:CDS | 50.0% | |
| CTCAGCAGTAGCTTCCTTAG+AGG | - | chr7_1:72680348-72680367 | None:intergenic | 50.0% | |
| ! | CTCTAAGGAAGCTACTGCTG+AGG | + | chr7_1:72680346-72680365 | Msa1036330:CDS | 50.0% |
| TCTCGCCTCTATAACCGACT+AGG | - | chr7_1:72681127-72681146 | None:intergenic | 50.0% | |
| ACATGTTCTTCCGGTACGAC+CGG | - | chr7_1:72682193-72682212 | None:intergenic | 50.0% | |
| TCGCAGCTTTCTGATGCCTT+AGG | + | chr7_1:72682341-72682360 | Msa1036330:CDS | 50.0% | |
| ! | ATCTCGAGGAGCATACTCTC+AGG | + | chr7_1:72682724-72682743 | Msa1036330:intron | 50.0% |
| GATGGTGACTGGATGCTTGT+CGG | + | chr7_1:72682971-72682990 | Msa1036330:CDS | 50.0% | |
| TGTAATTGGATCCCCTGCTC+TGG | + | chr7_1:72684269-72684288 | Msa1036330:intron | 50.0% | |
| ACAAGACCTAACCAGAGCAG+GGG | - | chr7_1:72684283-72684302 | None:intergenic | 50.0% | |
| !! | AGGTCTTGTTATCGGAGTGG+TGG | + | chr7_1:72684294-72684313 | Msa1036330:intron | 50.0% |
| ! | ACAGGGGCAAGGGGAGTTTT+TGG | - | chr7_1:72680019-72680038 | None:intergenic | 55.0% |
| GGATCAGCCACAGCTACTGA+AGG | + | chr7_1:72680245-72680264 | Msa1036330:CDS | 55.0% | |
| GGCAGGATCTGCAGGCAAAA+GGG | - | chr7_1:72680417-72680436 | None:intergenic | 55.0% | |
| TGGCAGGATCTGCAGGCAAA+AGG | - | chr7_1:72680418-72680437 | None:intergenic | 55.0% | |
| TACTTTGCAGGAGGCTTGGC+AGG | - | chr7_1:72680434-72680453 | None:intergenic | 55.0% | |
| !! | ATAGGGCTCAAGTGGTGGGT+TGG | + | chr7_1:72682159-72682178 | Msa1036330:intron | 55.0% |
| TCGTACCGTCTTGTAAGGGG+CGG | + | chr7_1:72683915-72683934 | Msa1036330:intron | 55.0% | |
| TTGGATCCCCTGCTCTGGTT+AGG | + | chr7_1:72684274-72684293 | Msa1036330:intron | 55.0% | |
| TTCTTCCGGTACGACCGGAC+AGG | - | chr7_1:72682188-72682207 | None:intergenic | 60.0% | |
| TGCTTGTCGGTGACGTCCCA+TGG | + | chr7_1:72682984-72683003 | Msa1036330:CDS | 60.0% | |
| GCTTGTCGGTGACGTCCCAT+GGG | + | chr7_1:72682985-72683004 | Msa1036330:CDS | 60.0% | |
| GAGCTAGAAGGGACCAGCAG+AGG | + | chr7_1:72683343-72683362 | Msa1036330:intron | 60.0% | |
| GAAGGGACCAGCAGAGGTCA+TGG | + | chr7_1:72683349-72683368 | Msa1036330:intron | 60.0% | |
| AGTGGGACCATGACCTCTGC+TGG | - | chr7_1:72683359-72683378 | None:intergenic | 60.0% | |
| GGAGGCTTGGCAGGATCTGC+AGG | - | chr7_1:72680425-72680444 | None:intergenic | 65.0% | |
| !! | TGGTGGGTTGGCCACCTGTC+CGG | + | chr7_1:72682171-72682190 | Msa1036330:CDS | 65.0% |
| TTCCGGTACGACCGGACAGG+TGG | - | chr7_1:72682185-72682204 | None:intergenic | 65.0% | |
| GGCCACCTGTCCGGTCGTAC+CGG | + | chr7_1:72682180-72682199 | Msa1036330:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 72680016 | 72685191 | 72680016 | ID=Msa1036330;Name=Msa1036330 |
| chr7_1 | mRNA | 72680016 | 72685191 | 72680016 | ID=Msa1036330-mRNA-1;Parent=Msa1036330;Name=Msa1036330-mRNA-1;_AED=0.03;_eAED=0.03;_QI=145|0.66|1|1|0.66|1|4|328|255 |
| chr7_1 | exon | 72680016 | 72680450 | 72680016 | ID=Msa1036330-mRNA-1:exon:17691;Parent=Msa1036330-mRNA-1 |
| chr7_1 | exon | 72682163 | 72682389 | 72682163 | ID=Msa1036330-mRNA-1:exon:17692;Parent=Msa1036330-mRNA-1 |
| chr7_1 | exon | 72682873 | 72683008 | 72682873 | ID=Msa1036330-mRNA-1:exon:17693;Parent=Msa1036330-mRNA-1 |
| chr7_1 | exon | 72684749 | 72685191 | 72684749 | ID=Msa1036330-mRNA-1:exon:17694;Parent=Msa1036330-mRNA-1 |
| chr7_1 | five_prime_UTR | 72680016 | 72680160 | 72680016 | ID=Msa1036330-mRNA-1:five_prime_utr;Parent=Msa1036330-mRNA-1 |
| chr7_1 | CDS | 72680161 | 72680450 | 72680161 | ID=Msa1036330-mRNA-1:cds;Parent=Msa1036330-mRNA-1 |
| chr7_1 | CDS | 72682163 | 72682389 | 72682163 | ID=Msa1036330-mRNA-1:cds;Parent=Msa1036330-mRNA-1 |
| chr7_1 | CDS | 72682873 | 72683008 | 72682873 | ID=Msa1036330-mRNA-1:cds;Parent=Msa1036330-mRNA-1 |
| chr7_1 | CDS | 72684749 | 72684863 | 72684749 | ID=Msa1036330-mRNA-1:cds;Parent=Msa1036330-mRNA-1 |
| chr7_1 | three_prime_UTR | 72684864 | 72685191 | 72684864 | ID=Msa1036330-mRNA-1:three_prime_utr;Parent=Msa1036330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
