Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036790 | RHN48213.1 | 92.121 | 495 | 11 | 4 | 66 | 549 | 79 | 556 | 0.0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036790 | sp|P02857|LEGA_PEA | 71.906 | 509 | 102 | 6 | 61 | 548 | 24 | 512 | 0.0 | 713 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036790 | A0A396H636 | 92.121 | 495 | 11 | 4 | 66 | 549 | 79 | 556 | 0.0 | 843 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1036780 | Msa1036790 | 0.955434 | 3.061360e-113 | -8.615850e-47 |
| Msa1036790 | Msa1077210 | 0.812331 | 4.473103e-51 | -8.615850e-47 |
| Msa1036790 | Msa1149390 | 0.834766 | 2.479139e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036790 | MtrunA17_Chr7g0261351 | 92.121 | 495 | 11 | 4 | 66 | 549 | 79 | 556 | 0.0 | 843 |
| Msa1036790 | MtrunA17_Chr1g0185841 | 41.835 | 545 | 240 | 12 | 66 | 544 | 29 | 562 | 1.53e-131 | 395 |
| Msa1036790 | MtrunA17_Chr1g0185811 | 40.357 | 560 | 243 | 11 | 66 | 544 | 29 | 578 | 1.04e-124 | 378 |
| Msa1036790 | MtrunA17_Chr7g0261321 | 38.623 | 523 | 252 | 8 | 64 | 544 | 28 | 523 | 4.33e-119 | 362 |
| Msa1036790 | MtrunA17_Chr1g0185821 | 40.927 | 518 | 246 | 8 | 66 | 533 | 29 | 536 | 6.87e-119 | 362 |
| Msa1036790 | MtrunA17_Chr1g0183891 | 41.304 | 184 | 101 | 3 | 322 | 500 | 41 | 222 | 1.98e-37 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036790 | AT5G44120.3 | 39.451 | 474 | 229 | 7 | 66 | 537 | 34 | 451 | 6.54e-109 | 333 |
| Msa1036790 | AT1G03880.1 | 38.333 | 480 | 227 | 9 | 57 | 533 | 21 | 434 | 3.45e-95 | 298 |
| Msa1036790 | AT5G44120.2 | 38.958 | 403 | 188 | 7 | 137 | 537 | 1 | 347 | 2.02e-86 | 272 |
| Msa1036790 | AT1G03890.1 | 32.842 | 475 | 253 | 6 | 59 | 533 | 27 | 435 | 2.38e-84 | 270 |
| Msa1036790 | AT4G28520.1 | 35.616 | 365 | 184 | 5 | 173 | 537 | 189 | 502 | 2.25e-67 | 227 |
| Msa1036790 | AT4G28520.1 | 35.115 | 131 | 72 | 3 | 20 | 150 | 2 | 119 | 8.04e-16 | 80.9 |
| Msa1036790 | AT5G44120.1 | 36.977 | 311 | 144 | 6 | 229 | 537 | 4 | 264 | 1.26e-57 | 194 |
| Msa1036790 | AT4G28520.5 | 30.415 | 434 | 207 | 9 | 20 | 422 | 2 | 371 | 4.97e-51 | 179 |
| Msa1036790 | AT4G28520.3 | 41.216 | 148 | 87 | 0 | 390 | 537 | 284 | 431 | 6.05e-36 | 140 |
| Msa1036790 | AT4G28520.3 | 35.115 | 131 | 72 | 3 | 20 | 150 | 2 | 119 | 5.54e-16 | 80.9 |
| Msa1036790 | AT4G28520.3 | 46.667 | 60 | 32 | 0 | 173 | 232 | 189 | 248 | 6.30e-12 | 68.2 |
| Msa1036790 | AT4G28520.2 | 33.600 | 250 | 115 | 5 | 173 | 422 | 189 | 387 | 1.17e-31 | 127 |
| Msa1036790 | AT4G28520.2 | 35.115 | 131 | 72 | 3 | 20 | 150 | 2 | 119 | 4.76e-16 | 80.9 |
| Msa1036790 | AT4G28520.4 | 33.600 | 250 | 115 | 5 | 173 | 422 | 189 | 387 | 1.28e-31 | 126 |
| Msa1036790 | AT4G28520.4 | 35.115 | 131 | 72 | 3 | 20 | 150 | 2 | 119 | 4.57e-16 | 80.9 |
Find 135 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAGGTAGTGGATATTT+TGG | 0.189498 | 7_1:-73232106 | Msa1036790:intron |
| GCATCTCATCAAGTTGATTT+TGG | 0.194708 | 7_1:+73231843 | None:intergenic |
| TTCCTACCGGTACTGTATTT+TGG | 0.198276 | 7_1:-73231925 | Msa1036790:CDS |
| CTCTGAAGCGGTTAACCTTT+TGG | 0.227280 | 7_1:+73231966 | None:intergenic |
| ATCTTCTTCATCTTGTCTGC+TGG | 0.238556 | 7_1:+73231431 | None:intergenic |
| CATCTGAATTGTCTGTTGTT+TGG | 0.280692 | 7_1:+73232324 | None:intergenic |
| TGGCTTCAAGAGGGATTTCT+TGG | 0.297875 | 7_1:-73231589 | Msa1036790:CDS |
| GCTGCCATTGCTAGGCTTGC+AGG | 0.308997 | 7_1:-73230798 | Msa1036790:CDS |
| ACCAAGATTGCTGGATTTAT+CGG | 0.343955 | 7_1:-73233905 | Msa1036790:CDS |
| AAAGAGAGAGTCGCAGGTTC+AGG | 0.353682 | 7_1:-73232030 | Msa1036790:CDS |
| TCTGACTCTATACGGTTATC+AGG | 0.356503 | 7_1:+73232372 | None:intergenic |
| GGGGAGAACAAAGGAGAGGA+AGG | 0.357587 | 7_1:-73231647 | Msa1036790:CDS |
| TCTTCTTCATCTTGTCTGCT+GGG | 0.361536 | 7_1:+73231432 | None:intergenic |
| GCCGTTTCTCTTATTGATAC+TGG | 0.366921 | 7_1:-73231872 | Msa1036790:CDS |
| TTGACTGTCACCAAGATTGC+TGG | 0.367012 | 7_1:-73233914 | Msa1036790:CDS |
| TGACAGAGATTCTATCTTGC+TGG | 0.375161 | 7_1:-73231720 | Msa1036790:intron |
| AAGATGCATTGAACGTGAAC+AGG | 0.383240 | 7_1:-73231566 | Msa1036790:CDS |
| GAAAATTTCTTGAGGAGCAT+TGG | 0.398726 | 7_1:+73232239 | None:intergenic |
| GGGTGGCGTTGTTGTCTCTC+TGG | 0.402254 | 7_1:+73231453 | None:intergenic |
| TGCCACCTTCTGACTCTATA+CGG | 0.408552 | 7_1:+73232364 | None:intergenic |
| CAGAAACAATTTGCACTGCC+AGG | 0.417327 | 7_1:-73231284 | Msa1036790:CDS |
| ACCGATAAATCCAGCAATCT+TGG | 0.425360 | 7_1:+73233904 | None:intergenic |
| AGCTCAACGTTCGGACTCAC+GGG | 0.435206 | 7_1:+73230659 | None:intergenic |
| CAGGAACGAAGACGAGGAGA+AGG | 0.436632 | 7_1:-73231520 | Msa1036790:CDS |
| GCTTTGACCTCCCAGCTCTC+AGG | 0.439759 | 7_1:-73231185 | Msa1036790:CDS |
| TCCTCCTTCCACTTTGACAA+TGG | 0.447325 | 7_1:+73231494 | None:intergenic |
| AGTCTTAGCCACCTGAGAGC+TGG | 0.450799 | 7_1:+73231174 | None:intergenic |
| ATCAAAGTAACTGACCTTGT+TGG | 0.450830 | 7_1:+73232214 | None:intergenic |
| CAAAGAAGCGAGGACTAGTC+AGG | 0.453158 | 7_1:-73233870 | Msa1036790:CDS |
| TTAAGCTGCAGCTCAACGTT+CGG | 0.453184 | 7_1:+73230650 | None:intergenic |
| GTCTTAGCCACCTGAGAGCT+GGG | 0.457608 | 7_1:+73231175 | None:intergenic |
| ATAAGAGAAACGGCAATGAC+TGG | 0.458432 | 7_1:+73231881 | None:intergenic |
| GAAAAGCAGAAGAGGGGAAG+AGG | 0.459048 | 7_1:-73231364 | Msa1036790:CDS |
| AGCGTAATATTAGCATTGAA+TGG | 0.476842 | 7_1:-73230978 | Msa1036790:CDS |
| TGTGGCTCCTCAAAGGTCTC+AGG | 0.481154 | 7_1:+73232064 | None:intergenic |
| AAAGTGAAGGATTGCAAGAA+GGG | 0.484187 | 7_1:+73233962 | None:intergenic |
| ATGAAGATGAGACCATGTTC+TGG | 0.486320 | 7_1:+73231256 | None:intergenic |
| CTTCATCTTGTCTGCTGGGG+TGG | 0.487224 | 7_1:+73231436 | None:intergenic |
| CAACAACAAGTGAGAGGAAG+GGG | 0.490614 | 7_1:-73231666 | Msa1036790:CDS |
| GCCAGTATCAATAAGAGAAA+CGG | 0.493583 | 7_1:+73231871 | None:intergenic |
| ATGATAATGCTGCCATTGCT+AGG | 0.494110 | 7_1:-73230806 | Msa1036790:CDS |
| CTATACGGTTATCAGGTTCA+AGG | 0.495690 | 7_1:+73232379 | None:intergenic |
| GGGTTGTCCTGAGACCTTTG+AGG | 0.496834 | 7_1:-73232071 | Msa1036790:CDS |
| TTCGATGAGGAGCTAGAAGC+TGG | 0.507000 | 7_1:-73230912 | Msa1036790:CDS |
| GAAGAGCGCCCCTGCCGCCG+AGG | 0.510029 | 7_1:-73231342 | Msa1036790:CDS |
| AGATGAAGATGAAGATGAAG+AGG | 0.510375 | 7_1:-73231412 | Msa1036790:CDS |
| GAGAGCTGGGAGGTCAAAGC+TGG | 0.514503 | 7_1:+73231188 | None:intergenic |
| CAGCAAAATCAGTGAGCGAC+AGG | 0.515977 | 7_1:-73230854 | Msa1036790:CDS |
| AGATTCCTGTGGCTCCTCAA+AGG | 0.516882 | 7_1:+73232057 | None:intergenic |
| TGAGGAGCATTGGAGTAGAA+TGG | 0.517059 | 7_1:+73232249 | None:intergenic |
| AGCAATGGCAGCATTATCAT+TGG | 0.517614 | 7_1:+73230809 | None:intergenic |
| GACAGAGATTCTATCTTGCT+GGG | 0.518681 | 7_1:-73231719 | Msa1036790:intron |
| ATGAAGATGAAGAGGACGAG+TGG | 0.519387 | 7_1:-73231404 | Msa1036790:CDS |
| AAGAGAGAGTCGCAGGTTCA+GGG | 0.521011 | 7_1:-73232029 | Msa1036790:CDS |
| CTGCCATTGCTAGGCTTGCA+GGG | 0.521189 | 7_1:-73230797 | Msa1036790:CDS |
| AACAGACAATTCAGATGTGC+AGG | 0.521313 | 7_1:-73232318 | Msa1036790:CDS |
| TCAAAGGTCTCAGGACAACC+CGG | 0.526522 | 7_1:+73232073 | None:intergenic |
| CGGCAATGACTGGAGTGTCC+TGG | 0.528720 | 7_1:+73231891 | None:intergenic |
| GGCGTTGTTGTCTCTCTGGA+GGG | 0.532511 | 7_1:+73231457 | None:intergenic |
| CAGCTACATTCAACATGGAC+AGG | 0.533471 | 7_1:-73230734 | Msa1036790:CDS |
| GTCAGGATGCTGATGGTGGC+AGG | 0.533662 | 7_1:-73233853 | Msa1036790:intron |
| ATGAAGAGGACGAGTGGAGG+CGG | 0.533847 | 7_1:-73231398 | Msa1036790:CDS |
| AAAAGTGAAGGATTGCAAGA+AGG | 0.534874 | 7_1:+73233961 | None:intergenic |
| ATCAACTTGATGAGATGCCT+AGG | 0.535577 | 7_1:-73231838 | Msa1036790:CDS |
| AGCAACAACAAGTGAGAGGA+AGG | 0.535707 | 7_1:-73231668 | Msa1036790:CDS |
| GCTTGTGGGTTGTAGATGTC+AGG | 0.536179 | 7_1:+73231231 | None:intergenic |
| GACATCTACAACCCACAAGC+TGG | 0.543748 | 7_1:-73231228 | Msa1036790:CDS |
| CACTGGCATCCCACTTAGAG+TGG | 0.546537 | 7_1:+73230767 | None:intergenic |
| GTTCAGAGACAGTCACCAAA+AGG | 0.548058 | 7_1:-73231981 | Msa1036790:CDS |
| GAGCGACAGGTTCACTTATG+TGG | 0.548616 | 7_1:-73230841 | Msa1036790:CDS |
| AGGGAACAAGAAGAAAATGA+AGG | 0.549429 | 7_1:-73231627 | Msa1036790:CDS |
| TGGCGTTGTTGTCTCTCTGG+AGG | 0.551371 | 7_1:+73231456 | None:intergenic |
| GATCTCATTGCAGTTCCTAC+CGG | 0.553691 | 7_1:-73231938 | Msa1036790:CDS |
| TGAGACCTTTGAGGAGCCAC+AGG | 0.553953 | 7_1:-73232062 | Msa1036790:CDS |
| CTTCTTCATCTTGTCTGCTG+GGG | 0.554236 | 7_1:+73231433 | None:intergenic |
| GGGACACAATCCACTCTAAG+TGG | 0.554986 | 7_1:-73230777 | Msa1036790:CDS |
| GACCATGTTCTGGTGAAGCC+TGG | 0.558245 | 7_1:+73231266 | None:intergenic |
| ATCATCAGAAAAGCAGAAGA+GGG | 0.559051 | 7_1:-73231371 | Msa1036790:CDS |
| AAGGTGGCATTATTGAGACT+TGG | 0.560213 | 7_1:-73232350 | Msa1036790:CDS |
| CTGAACAAAGAGAGAGTCGC+AGG | 0.561151 | 7_1:-73232036 | Msa1036790:CDS |
| GAAGGGAGCCATTGTCAAAG+TGG | 0.561778 | 7_1:-73231502 | Msa1036790:CDS |
| CATCATCAGAAAAGCAGAAG+AGG | 0.567506 | 7_1:-73231372 | Msa1036790:CDS |
| TCTCTTTGTTCAGATTCCTG+TGG | 0.573636 | 7_1:+73232046 | None:intergenic |
| GGAAGGGGAGAACAAAGGAG+AGG | 0.578313 | 7_1:-73231651 | Msa1036790:CDS |
| AGGAACGAAGACGAGGAGAA+GGG | 0.580851 | 7_1:-73231519 | Msa1036790:CDS |
| GGGAGAACAAAGGAGAGGAA+GGG | 0.584205 | 7_1:-73231646 | Msa1036790:CDS |
| ATTCAACATGGACAGGAATG+AGG | 0.590592 | 7_1:-73230727 | Msa1036790:CDS |
| TGCCAGGCTTCACCAGAACA+TGG | 0.593210 | 7_1:-73231268 | Msa1036790:CDS |
| CTAAGACTCAGTGCTGAGCA+TGG | 0.593269 | 7_1:-73231159 | Msa1036790:CDS |
| AAGGTTAACCGCTTCAGAGA+GGG | 0.593895 | 7_1:-73231962 | Msa1036790:CDS |
| GGAGCCATTGTCAAAGTGGA+AGG | 0.595071 | 7_1:-73231498 | Msa1036790:CDS |
| TGAGATCACCCTCTCTGAAG+CGG | 0.596806 | 7_1:+73231954 | None:intergenic |
| TATACGGTTATCAGGTTCAA+GGG | 0.597531 | 7_1:+73232380 | None:intergenic |
| GTAGCTGCAAGCACATCCAC+TGG | 0.599451 | 7_1:+73230750 | None:intergenic |
| TGTTGGATGAAAATTTCTTG+AGG | 0.600246 | 7_1:+73232231 | None:intergenic |
| AGCTGACACTCATTTCGTTG+AGG | 0.603602 | 7_1:+73232417 | None:intergenic |
| TGAGAGGAAGGGGAGAACAA+AGG | 0.604422 | 7_1:-73231656 | Msa1036790:CDS |
| TTGACCTCCCAGCTCTCAGG+TGG | 0.604883 | 7_1:-73231182 | Msa1036790:CDS |
| TTGAAGAGTACAACGAGAGA+GGG | 0.608324 | 7_1:+73232290 | None:intergenic |
| AAGATGAAGAGGACGAGTGG+AGG | 0.609586 | 7_1:-73231401 | Msa1036790:CDS |
| GCAACAACAAGTGAGAGGAA+GGG | 0.610187 | 7_1:-73231667 | Msa1036790:CDS |
| GAACAAGAAGAAAATGAAGG+AGG | 0.622267 | 7_1:-73231624 | Msa1036790:CDS |
| AGGGAATCTGAACAAGGAGA+AGG | 0.623842 | 7_1:-73232010 | Msa1036790:CDS |
| GTACATCCAAAATACAGTAC+CGG | 0.624828 | 7_1:+73231919 | None:intergenic |
| TAGCATTGAATGGACGTGCA+AGG | 0.625592 | 7_1:-73230968 | Msa1036790:CDS |
| AGATGCATTGAACGTGAACA+GGG | 0.625997 | 7_1:-73231565 | Msa1036790:CDS |
| TCAACTTGATGAGATGCCTA+GGG | 0.627421 | 7_1:-73231837 | Msa1036790:intron |
| GCCATTGTCAAAGTGGAAGG+AGG | 0.628414 | 7_1:-73231495 | Msa1036790:CDS |
| CAAAGGTCTCAGGACAACCC+GGG | 0.629938 | 7_1:+73232074 | None:intergenic |
| CATGGCGCACTCTAGTAAGA+CGG | 0.631839 | 7_1:-73233987 | Msa1036790:CDS |
| TGTCCCTGCAAGCCTAGCAA+TGG | 0.632591 | 7_1:+73230794 | None:intergenic |
| CTACAAGTAGTGAACTGCAA+TGG | 0.634940 | 7_1:-73230945 | Msa1036790:CDS |
| GTTGAAGAGTACAACGAGAG+AGG | 0.643187 | 7_1:+73232289 | None:intergenic |
| CAACGTTCGGACTCACGGGG+TGG | 0.644087 | 7_1:+73230663 | None:intergenic |
| ACTAGTCAGGATGCTGATGG+TGG | 0.646285 | 7_1:-73233857 | Msa1036790:CDS |
| ACATGGACAGGAATGAGGCA+AGG | 0.649331 | 7_1:-73230722 | Msa1036790:CDS |
| GGACACAATCCACTCTAAGT+GGG | 0.651552 | 7_1:-73230776 | Msa1036790:CDS |
| CAAAATCTTGCAAAGAAGCG+AGG | 0.654509 | 7_1:-73233880 | Msa1036790:CDS |
| TATCAGCAACAACAAGTGAG+AGG | 0.656929 | 7_1:-73231672 | Msa1036790:CDS |
| AGGTTCAGGGAATCTGAACA+AGG | 0.656969 | 7_1:-73232016 | Msa1036790:CDS |
| TCAAGGCAGGAACGAAGACG+AGG | 0.664269 | 7_1:-73231526 | Msa1036790:CDS |
| GCTTGCAGCTACATTCAACA+TGG | 0.668251 | 7_1:-73230739 | Msa1036790:CDS |
| TGGCAACACTGTGTTCGATG+AGG | 0.669328 | 7_1:-73230925 | Msa1036790:CDS |
| TGTGAAAGAGAAAGACGCAA+CGG | 0.673639 | 7_1:-73231312 | Msa1036790:CDS |
| AGGACTAGTCAGGATGCTGA+TGG | 0.675850 | 7_1:-73233860 | Msa1036790:CDS |
| TCATCAGAAAAGCAGAAGAG+GGG | 0.679443 | 7_1:-73231370 | Msa1036790:CDS |
| AACCGTATAGAGTCAGAAGG+TGG | 0.682330 | 7_1:-73232366 | Msa1036790:CDS |
| CTGAACAAGGAGAAGGACGT+AGG | 0.683262 | 7_1:-73232003 | Msa1036790:CDS |
| GCTCAACGTTCGGACTCACG+GGG | 0.685852 | 7_1:+73230660 | None:intergenic |
| GATAACCGTATAGAGTCAGA+AGG | 0.693081 | 7_1:-73232369 | Msa1036790:CDS |
| AAAGGTTAACCGCTTCAGAG+AGG | 0.693271 | 7_1:-73231963 | Msa1036790:CDS |
| ATCCAAAATACAGTACCGGT+AGG | 0.700412 | 7_1:+73231923 | None:intergenic |
| TTTGCATTGAGATTGTAGTG+AGG | 0.715037 | 7_1:+73231002 | None:intergenic |
| CATTGGAGTAGAATGGTCTG+CGG | 0.722604 | 7_1:+73232256 | None:intergenic |
| TTAGCCACCTGAGAGCTGGG+AGG | 0.734436 | 7_1:+73231178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGAGTATAATTTATAAA+AGG | - | chr7_1:73231462-73231481 | Msa1036790:CDS | 10.0% |
| !! | ATGAATTATATATTCATATA+TGG | - | chr7_1:73231803-73231822 | Msa1036790:intron | 10.0% |
| !!! | TTAATTTGATGTGAATAAAA+AGG | + | chr7_1:73230943-73230962 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCATGAGAAAAAT+TGG | - | chr7_1:73231079-73231098 | Msa1036790:intron | 15.0% |
| !!! | TTTTTTTCATGAGAAAAATT+GGG | - | chr7_1:73231080-73231099 | Msa1036790:intron | 15.0% |
| !!! | GTAATTTTTTTATCATTTGT+TGG | + | chr7_1:73231218-73231237 | None:intergenic | 15.0% |
| !!! | TACTCAAATTCAATTTTTAA+AGG | + | chr7_1:73231451-73231470 | None:intergenic | 15.0% |
| !!! | TTGTTACATTAGATTTTTAA+AGG | - | chr7_1:73231513-73231532 | Msa1036790:CDS | 15.0% |
| !!! | TAAAAGATAAAGTATTTGTT+TGG | - | chr7_1:73232888-73232907 | Msa1036790:intron | 15.0% |
| !!! | TTTTTTCATGAGAAAAATTG+GGG | - | chr7_1:73231081-73231100 | Msa1036790:intron | 20.0% |
| !!! | AAAACTTTTCAGATTTTTTC+AGG | + | chr7_1:73231245-73231264 | None:intergenic | 20.0% |
| !!! | CTTTTGAATGATCAAATTAA+AGG | + | chr7_1:73231490-73231509 | None:intergenic | 20.0% |
| !!! | CTTTAATTTGATCATTCAAA+AGG | - | chr7_1:73231488-73231507 | Msa1036790:CDS | 20.0% |
| !! | AAAAGAAAAAACATACTCTA+TGG | + | chr7_1:73233521-73233540 | None:intergenic | 20.0% |
| !! | TTTTTCATGAGAAAAATTGG+GGG | - | chr7_1:73231082-73231101 | Msa1036790:intron | 25.0% |
| !! | TTTTAATATGATTCAGGTCA+TGG | + | chr7_1:73231129-73231148 | None:intergenic | 25.0% |
| !! | TGGTTCTTTTAATATGATTC+AGG | + | chr7_1:73231135-73231154 | None:intergenic | 25.0% |
| !! | AGATTAGTTATCAACAAAGT+CGG | + | chr7_1:73231328-73231347 | None:intergenic | 25.0% |
| ! | TCTTGTGTATAGAAAAAATG+TGG | + | chr7_1:73231399-73231418 | None:intergenic | 25.0% |
| !! | TTAAAGGTTTCTTTTAAGCA+AGG | + | chr7_1:73231435-73231454 | None:intergenic | 25.0% |
| !! | TCTACTCTTATAATTTTGTC+TGG | - | chr7_1:73231860-73231879 | Msa1036790:CDS | 25.0% |
| !! | ATAATTTTGTCTGGTTATCA+TGG | - | chr7_1:73231869-73231888 | Msa1036790:CDS | 25.0% |
| ! | TATAAATTCCCATGCAATTA+AGG | - | chr7_1:73232066-73232085 | Msa1036790:CDS | 25.0% |
| ! | TGTAATGTAGGTAAAGATAT+TGG | + | chr7_1:73232466-73232485 | None:intergenic | 25.0% |
| ! | CTAATATATGCATGTAATGT+AGG | + | chr7_1:73232478-73232497 | None:intergenic | 25.0% |
| !!! | TTTTTTACTATACCCATTAC+AGG | - | chr7_1:73232527-73232546 | Msa1036790:intron | 25.0% |
| ! | GATATAGTTGAAAAACTTCA+AGG | - | chr7_1:73233105-73233124 | Msa1036790:intron | 25.0% |
| !! | TCTTTTAGCATCAACATTAT+AGG | - | chr7_1:73233571-73233590 | Msa1036790:intron | 25.0% |
| AACATCAAGTGAAAAAGTGA+AGG | + | chr7_1:73230702-73230721 | None:intergenic | 30.0% | |
| AGTGAGACCACAAATATTAT+GGG | + | chr7_1:73230825-73230844 | None:intergenic | 30.0% | |
| TAGTGAGACCACAAATATTA+TGG | + | chr7_1:73230826-73230845 | None:intergenic | 30.0% | |
| CTAATTACTAACTGAAGCAT+TGG | - | chr7_1:73230843-73230862 | Msa1036790:CDS | 30.0% | |
| !! | AACAGTAAAGTGTTGAGAAA+TGG | + | chr7_1:73231061-73231080 | None:intergenic | 30.0% |
| ! | TTTTCATGAGAAAAATTGGG+GGG | - | chr7_1:73231083-73231102 | Msa1036790:intron | 30.0% |
| AAGAACCAAGTTAATCAGTA+TGG | - | chr7_1:73231147-73231166 | Msa1036790:CDS | 30.0% | |
| AGAACCAAGTTAATCAGTAT+GGG | - | chr7_1:73231148-73231167 | Msa1036790:CDS | 30.0% | |
| ATAGAAAAAATGTGGTTGGA+AGG | + | chr7_1:73231391-73231410 | None:intergenic | 30.0% | |
| GTGTATAGAAAAAATGTGGT+TGG | + | chr7_1:73231395-73231414 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr7_1:73231712-73231731 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr7_1:73231715-73231734 | Msa1036790:CDS | 30.0% | |
| ATACTCATTCTATCCAATCA+TGG | - | chr7_1:73232122-73232141 | Msa1036790:intron | 30.0% | |
| TGTTGGATGAAAATTTCTTG+AGG | + | chr7_1:73232420-73232439 | None:intergenic | 30.0% | |
| ! | CAAGAAATTTTCATCCAACA+AGG | - | chr7_1:73232420-73232439 | Msa1036790:CDS | 30.0% |
| AAATATCCACTACCTGTAAT+GGG | + | chr7_1:73232542-73232561 | None:intergenic | 30.0% | |
| AAAATATCCACTACCTGTAA+TGG | + | chr7_1:73232543-73232562 | None:intergenic | 30.0% | |
| !!! | ATTACAGGTAGTGGATATTT+TGG | - | chr7_1:73232542-73232561 | Msa1036790:intron | 30.0% |
| ATTGTAAAAACTCTTGCTCT+TGG | + | chr7_1:73232957-73232976 | None:intergenic | 30.0% | |
| ! | GTCTTTCTCTTTCACATTTT+TGG | + | chr7_1:73233332-73233351 | None:intergenic | 30.0% |
| AGATTGACATAAAACGAATC+TGG | + | chr7_1:73233554-73233573 | None:intergenic | 30.0% | |
| !! | AACATTATAGGAAGTGTTCA+AGG | - | chr7_1:73233583-73233602 | Msa1036790:intron | 30.0% |
| ! | AGCGTAATATTAGCATTGAA+TGG | - | chr7_1:73233670-73233689 | Msa1036790:intron | 30.0% |
| AAAGTGAAGGATTGCAAGAA+GGG | + | chr7_1:73230689-73230708 | None:intergenic | 35.0% | |
| AAAAGTGAAGGATTGCAAGA+AGG | + | chr7_1:73230690-73230709 | None:intergenic | 35.0% | |
| ACCAAGATTGCTGGATTTAT+CGG | - | chr7_1:73230743-73230762 | Msa1036790:CDS | 35.0% | |
| GTGAGACCACAAATATTATG+GGG | + | chr7_1:73230824-73230843 | None:intergenic | 35.0% | |
| !! | GTTTATAGGGGCTTTAGAAA+AGG | - | chr7_1:73230871-73230890 | Msa1036790:CDS | 35.0% |
| TAACTACATGTTGCATTGCA+TGG | - | chr7_1:73230972-73230991 | Msa1036790:CDS | 35.0% | |
| TGTTGAGAAATGGATGACAA+GGG | + | chr7_1:73231051-73231070 | None:intergenic | 35.0% | |
| AAGTTAATCAGTATGGGTCA+CGG | - | chr7_1:73231154-73231173 | Msa1036790:CDS | 35.0% | |
| TGACACTAGTTACAAAGACT+TGG | + | chr7_1:73231181-73231200 | None:intergenic | 35.0% | |
| TTAGTTATCAACAAAGTCGG+TGG | + | chr7_1:73231325-73231344 | None:intergenic | 35.0% | |
| GAGACTCTATTAAAAGTGGT+CGG | + | chr7_1:73231367-73231386 | None:intergenic | 35.0% | |
| AGGAGAGACTCTATTAAAAG+TGG | + | chr7_1:73231371-73231390 | None:intergenic | 35.0% | |
| ! | TTTCTTTTAAGCAAGGTCTC+GGG | + | chr7_1:73231428-73231447 | None:intergenic | 35.0% |
| ! | GTTTCTTTTAAGCAAGGTCT+CGG | + | chr7_1:73231429-73231448 | None:intergenic | 35.0% |
| TTGTTACCATACAACATTGC+CGG | - | chr7_1:73231536-73231555 | Msa1036790:CDS | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr7_1:73231574-73231593 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr7_1:73231578-73231597 | Msa1036790:CDS | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr7_1:73231587-73231606 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | + | chr7_1:73231652-73231671 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr7_1:73231685-73231704 | Msa1036790:CDS | 35.0% |
| GTTACACGGTTTAGATATCT+TGG | + | chr7_1:73231713-73231732 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr7_1:73231714-73231733 | Msa1036790:CDS | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr7_1:73231716-73231735 | Msa1036790:CDS | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr7_1:73231727-73231746 | None:intergenic | 35.0% | |
| ATATGATCTCCAACTTCATG+TGG | - | chr7_1:73231743-73231762 | Msa1036790:intron | 35.0% | |
| ! | GATTTTCATCCACATGAAGT+TGG | + | chr7_1:73231755-73231774 | None:intergenic | 35.0% |
| ATTTAGCTAGCTGAAATTGG+TGG | + | chr7_1:73231838-73231857 | None:intergenic | 35.0% | |
| AGCATTTAGCTAGCTGAAAT+TGG | + | chr7_1:73231841-73231860 | None:intergenic | 35.0% | |
| GAATGAGTATATGCTTATGC+TGG | + | chr7_1:73232112-73232131 | None:intergenic | 35.0% | |
| TATACGGTTATCAGGTTCAA+GGG | + | chr7_1:73232271-73232290 | None:intergenic | 35.0% | |
| CATCTGAATTGTCTGTTGTT+TGG | + | chr7_1:73232327-73232346 | None:intergenic | 35.0% | |
| ! | GAAAATTTCTTGAGGAGCAT+TGG | + | chr7_1:73232412-73232431 | None:intergenic | 35.0% |
| ATCAAAGTAACTGACCTTGT+TGG | + | chr7_1:73232437-73232456 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGCATGGTATTCC+CGG | - | chr7_1:73232556-73232575 | Msa1036790:intron | 35.0% |
| GTACATCCAAAATACAGTAC+CGG | + | chr7_1:73232732-73232751 | None:intergenic | 35.0% | |
| ! | ATTTTGGATGTACAATGACC+AGG | - | chr7_1:73232739-73232758 | Msa1036790:intron | 35.0% |
| GCCAGTATCAATAAGAGAAA+CGG | + | chr7_1:73232780-73232799 | None:intergenic | 35.0% | |
| !!! | GCATCTCATCAAGTTGATTT+TGG | + | chr7_1:73232808-73232827 | None:intergenic | 35.0% |
| AGGGAACAAGAAGAAAATGA+AGG | - | chr7_1:73233021-73233040 | Msa1036790:intron | 35.0% | |
| GAACAAGAAGAAAATGAAGG+AGG | - | chr7_1:73233024-73233043 | Msa1036790:intron | 35.0% | |
| TAGTTGAAAAACTTCAAGGC+AGG | - | chr7_1:73233109-73233128 | Msa1036790:intron | 35.0% | |
| AGATGAAGATGAAGATGAAG+AGG | - | chr7_1:73233236-73233255 | Msa1036790:intron | 35.0% | |
| ATCATCAGAAAAGCAGAAGA+GGG | - | chr7_1:73233277-73233296 | Msa1036790:intron | 35.0% | |
| !! | TTTTGATTCTACCAGCTTGT+GGG | + | chr7_1:73233434-73233453 | None:intergenic | 35.0% |
| TTTGCATTGAGATTGTAGTG+AGG | + | chr7_1:73233649-73233668 | None:intergenic | 35.0% | |
| ACCGATAAATCCAGCAATCT+TGG | + | chr7_1:73230747-73230766 | None:intergenic | 40.0% | |
| CAAAATCTTGCAAAGAAGCG+AGG | - | chr7_1:73230768-73230787 | Msa1036790:CDS | 40.0% | |
| AGGTGTCCCCATAATATTTG+TGG | - | chr7_1:73230815-73230834 | Msa1036790:CDS | 40.0% | |
| !! | TTACTAACTGAAGCATTGGC+TGG | - | chr7_1:73230847-73230866 | Msa1036790:CDS | 40.0% |
| !! | AAGCATTGGCTGGAGTTTAT+AGG | - | chr7_1:73230857-73230876 | Msa1036790:CDS | 40.0% |
| !! | AGCATTGGCTGGAGTTTATA+GGG | - | chr7_1:73230858-73230877 | Msa1036790:CDS | 40.0% |
| ! | TGAACTGCTGCAGAGTATTA+TGG | + | chr7_1:73231006-73231025 | None:intergenic | 40.0% |
| GTGTTGAGAAATGGATGACA+AGG | + | chr7_1:73231052-73231071 | None:intergenic | 40.0% | |
| ! | GTGACCCATACTGATTAACT+TGG | + | chr7_1:73231155-73231174 | None:intergenic | 40.0% |
| GTACATCATCGTATTCAAGC+TGG | + | chr7_1:73231653-73231672 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr7_1:73231692-73231711 | None:intergenic | 40.0% | |
| !! | TAGCTGAAATTGGTGGTGAT+GGG | + | chr7_1:73231831-73231850 | None:intergenic | 40.0% |
| TGAGACATTGTGACTTTGTG+AGG | - | chr7_1:73231926-73231945 | Msa1036790:CDS | 40.0% | |
| TTTGTGAGGTGTAATGCACA+AGG | - | chr7_1:73231940-73231959 | Msa1036790:CDS | 40.0% | |
| TAGACATTCTTCATCGTGCA+TGG | + | chr7_1:73231975-73231994 | None:intergenic | 40.0% | |
| CTATACGGTTATCAGGTTCA+AGG | + | chr7_1:73232272-73232291 | None:intergenic | 40.0% | |
| TCTGACTCTATACGGTTATC+AGG | + | chr7_1:73232279-73232298 | None:intergenic | 40.0% | |
| GATAACCGTATAGAGTCAGA+AGG | - | chr7_1:73232279-73232298 | Msa1036790:CDS | 40.0% | |
| AAGGTGGCATTATTGAGACT+TGG | - | chr7_1:73232298-73232317 | Msa1036790:CDS | 40.0% | |
| AACAGACAATTCAGATGTGC+AGG | - | chr7_1:73232330-73232349 | Msa1036790:CDS | 40.0% | |
| ! | TTGAAGAGTACAACGAGAGA+GGG | + | chr7_1:73232361-73232380 | None:intergenic | 40.0% |
| ACTATACCCATTACAGGTAG+TGG | - | chr7_1:73232533-73232552 | Msa1036790:intron | 40.0% | |
| !!! | AGGTAGTGGATATTTTGGCA+TGG | - | chr7_1:73232547-73232566 | Msa1036790:intron | 40.0% |
| !!! | TATTTTGGCATGGTATTCCC+GGG | - | chr7_1:73232557-73232576 | Msa1036790:intron | 40.0% |
| TCTCTTTGTTCAGATTCCTG+TGG | + | chr7_1:73232605-73232624 | None:intergenic | 40.0% | |
| ! | TTCCTACCGGTACTGTATTT+TGG | - | chr7_1:73232723-73232742 | Msa1036790:intron | 40.0% |
| !! | ATCCAAAATACAGTACCGGT+AGG | + | chr7_1:73232728-73232747 | None:intergenic | 40.0% |
| ATAAGAGAAACGGCAATGAC+TGG | + | chr7_1:73232770-73232789 | None:intergenic | 40.0% | |
| GCCGTTTCTCTTATTGATAC+TGG | - | chr7_1:73232776-73232795 | Msa1036790:intron | 40.0% | |
| ATCAACTTGATGAGATGCCT+AGG | - | chr7_1:73232810-73232829 | Msa1036790:intron | 40.0% | |
| TCAACTTGATGAGATGCCTA+GGG | - | chr7_1:73232811-73232830 | Msa1036790:intron | 40.0% | |
| TGACAGAGATTCTATCTTGC+TGG | - | chr7_1:73232928-73232947 | Msa1036790:intron | 40.0% | |
| GACAGAGATTCTATCTTGCT+GGG | - | chr7_1:73232929-73232948 | Msa1036790:intron | 40.0% | |
| TATCAGCAACAACAAGTGAG+AGG | - | chr7_1:73232976-73232995 | Msa1036790:intron | 40.0% | |
| ! | ACATTTTCAGTGGCTTCAAG+AGG | - | chr7_1:73233049-73233068 | Msa1036790:intron | 40.0% |
| ! | CATTTTCAGTGGCTTCAAGA+GGG | - | chr7_1:73233050-73233069 | Msa1036790:intron | 40.0% |
| AAGATGCATTGAACGTGAAC+AGG | - | chr7_1:73233082-73233101 | Msa1036790:intron | 40.0% | |
| AGATGCATTGAACGTGAACA+GGG | - | chr7_1:73233083-73233102 | Msa1036790:intron | 40.0% | |
| TCTTCTTCATCTTGTCTGCT+GGG | + | chr7_1:73233219-73233238 | None:intergenic | 40.0% | |
| ATCTTCTTCATCTTGTCTGC+TGG | + | chr7_1:73233220-73233239 | None:intergenic | 40.0% | |
| !! | CTTCTGCTTTTCTGATGATG+TGG | + | chr7_1:73233276-73233295 | None:intergenic | 40.0% |
| CATCATCAGAAAAGCAGAAG+AGG | - | chr7_1:73233276-73233295 | Msa1036790:intron | 40.0% | |
| TCATCAGAAAAGCAGAAGAG+GGG | - | chr7_1:73233278-73233297 | Msa1036790:intron | 40.0% | |
| !!! | CTCTTTCACATTTTTGGCCT+CGG | + | chr7_1:73233326-73233345 | None:intergenic | 40.0% |
| TGTGAAAGAGAAAGACGCAA+CGG | - | chr7_1:73233336-73233355 | Msa1036790:intron | 40.0% | |
| ATGAAGATGAGACCATGTTC+TGG | + | chr7_1:73233395-73233414 | None:intergenic | 40.0% | |
| !!! | GTTTTGATTCTACCAGCTTG+TGG | + | chr7_1:73233435-73233454 | None:intergenic | 40.0% |
| CTACAAGTAGTGAACTGCAA+TGG | - | chr7_1:73233703-73233722 | Msa1036790:intron | 40.0% | |
| AGCAATGGCAGCATTATCAT+TGG | + | chr7_1:73233842-73233861 | None:intergenic | 40.0% | |
| ! | ATGATAATGCTGCCATTGCT+AGG | - | chr7_1:73233842-73233861 | Msa1036790:intron | 40.0% |
| ATTCAACATGGACAGGAATG+AGG | - | chr7_1:73233921-73233940 | Msa1036790:CDS | 40.0% | |
| TTGACTGTCACCAAGATTGC+TGG | - | chr7_1:73230734-73230753 | Msa1036790:CDS | 45.0% | |
| !! | GCATTGGCTGGAGTTTATAG+GGG | - | chr7_1:73230859-73230878 | Msa1036790:CDS | 45.0% |
| TCATGAGAAAAATTGGGGGG+AGG | - | chr7_1:73231086-73231105 | Msa1036790:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr7_1:73231607-73231626 | Msa1036790:CDS | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr7_1:73231626-73231645 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr7_1:73231640-73231659 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr7_1:73231649-73231668 | None:intergenic | 45.0% | |
| !! | AGCTGAAATTGGTGGTGATG+GGG | + | chr7_1:73231830-73231849 | None:intergenic | 45.0% |
| !! | CTAGCTGAAATTGGTGGTGA+TGG | + | chr7_1:73231832-73231851 | None:intergenic | 45.0% |
| CAGGTGGCTTCAATTCAACA+TGG | + | chr7_1:73231898-73231917 | None:intergenic | 45.0% | |
| ACAATGTCTCATTACTGCGC+AGG | + | chr7_1:73231917-73231936 | None:intergenic | 45.0% | |
| AGTGAAAGAGAGCAGTGTGA+AGG | + | chr7_1:73232047-73232066 | None:intergenic | 45.0% | |
| GCGGAGATCCTTAATTGCAT+GGG | + | chr7_1:73232077-73232096 | None:intergenic | 45.0% | |
| TGCGGAGATCCTTAATTGCA+TGG | + | chr7_1:73232078-73232097 | None:intergenic | 45.0% | |
| ! | ATGCTGGTTGTGTTGTGATG+CGG | + | chr7_1:73232096-73232115 | None:intergenic | 45.0% |
| GCAAGAAGCTTAGCCATGAT+TGG | + | chr7_1:73232138-73232157 | None:intergenic | 45.0% | |
| AGCTGACACTCATTTCGTTG+AGG | + | chr7_1:73232234-73232253 | None:intergenic | 45.0% | |
| AACCGTATAGAGTCAGAAGG+TGG | - | chr7_1:73232282-73232301 | Msa1036790:CDS | 45.0% | |
| TGCCACCTTCTGACTCTATA+CGG | + | chr7_1:73232287-73232306 | None:intergenic | 45.0% | |
| ! | GTTGAAGAGTACAACGAGAG+AGG | + | chr7_1:73232362-73232381 | None:intergenic | 45.0% |
| CATTGGAGTAGAATGGTCTG+CGG | + | chr7_1:73232395-73232414 | None:intergenic | 45.0% | |
| !! | TGAGGAGCATTGGAGTAGAA+TGG | + | chr7_1:73232402-73232421 | None:intergenic | 45.0% |
| AGGTTCAGGGAATCTGAACA+AGG | - | chr7_1:73232632-73232651 | Msa1036790:intron | 45.0% | |
| AGGGAATCTGAACAAGGAGA+AGG | - | chr7_1:73232638-73232657 | Msa1036790:intron | 45.0% | |
| GTTCAGAGACAGTCACCAAA+AGG | - | chr7_1:73232667-73232686 | Msa1036790:intron | 45.0% | |
| !!! | CTCTGAAGCGGTTAACCTTT+TGG | + | chr7_1:73232685-73232704 | None:intergenic | 45.0% |
| AAAGGTTAACCGCTTCAGAG+AGG | - | chr7_1:73232685-73232704 | Msa1036790:intron | 45.0% | |
| AAGGTTAACCGCTTCAGAGA+GGG | - | chr7_1:73232686-73232705 | Msa1036790:intron | 45.0% | |
| GATCTCATTGCAGTTCCTAC+CGG | - | chr7_1:73232710-73232729 | Msa1036790:intron | 45.0% | |
| AGCAACAACAAGTGAGAGGA+AGG | - | chr7_1:73232980-73232999 | Msa1036790:intron | 45.0% | |
| GCAACAACAAGTGAGAGGAA+GGG | - | chr7_1:73232981-73233000 | Msa1036790:intron | 45.0% | |
| CAACAACAAGTGAGAGGAAG+GGG | - | chr7_1:73232982-73233001 | Msa1036790:intron | 45.0% | |
| ! | GAAGGAGGCAACATTTTCAG+TGG | - | chr7_1:73233039-73233058 | Msa1036790:intron | 45.0% |
| TGGCTTCAAGAGGGATTTCT+TGG | - | chr7_1:73233059-73233078 | Msa1036790:intron | 45.0% | |
| TCCTCCTTCCACTTTGACAA+TGG | + | chr7_1:73233157-73233176 | None:intergenic | 45.0% | |
| CTTCTTCATCTTGTCTGCTG+GGG | + | chr7_1:73233218-73233237 | None:intergenic | 45.0% | |
| ATGAAGATGAAGAGGACGAG+TGG | - | chr7_1:73233244-73233263 | Msa1036790:intron | 45.0% | |
| !!! | TTTCACATTTTTGGCCTCGG+CGG | + | chr7_1:73233323-73233342 | None:intergenic | 45.0% |
| CAGAAACAATTTGCACTGCC+AGG | - | chr7_1:73233364-73233383 | Msa1036790:intron | 45.0% | |
| ! | TAGCATTGAATGGACGTGCA+AGG | - | chr7_1:73233680-73233699 | Msa1036790:intron | 45.0% |
| ! | GCTGCAACAGCAAAGTTTTG+TGG | + | chr7_1:73233778-73233797 | None:intergenic | 45.0% |
| GGACACAATCCACTCTAAGT+GGG | - | chr7_1:73233872-73233891 | Msa1036790:CDS | 45.0% | |
| GCTTGCAGCTACATTCAACA+TGG | - | chr7_1:73233909-73233928 | Msa1036790:CDS | 45.0% | |
| CAGCTACATTCAACATGGAC+AGG | - | chr7_1:73233914-73233933 | Msa1036790:CDS | 45.0% | |
| !! | CAAAGAAGCGAGGACTAGTC+AGG | - | chr7_1:73230778-73230797 | Msa1036790:CDS | 50.0% |
| !! | AGGACTAGTCAGGATGCTGA+TGG | - | chr7_1:73230788-73230807 | Msa1036790:CDS | 50.0% |
| ACTAGTCAGGATGCTGATGG+TGG | - | chr7_1:73230791-73230810 | Msa1036790:CDS | 50.0% | |
| GAGAAAAATTGGGGGGAGGA+TGG | - | chr7_1:73231090-73231109 | Msa1036790:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr7_1:73231545-73231564 | None:intergenic | 50.0% | |
| ATGTCTCATTACTGCGCAGG+TGG | + | chr7_1:73231914-73231933 | None:intergenic | 50.0% | |
| TCAAAGGTCTCAGGACAACC+CGG | + | chr7_1:73232578-73232597 | None:intergenic | 50.0% | |
| AGATTCCTGTGGCTCCTCAA+AGG | + | chr7_1:73232594-73232613 | None:intergenic | 50.0% | |
| CTGAACAAAGAGAGAGTCGC+AGG | - | chr7_1:73232612-73232631 | Msa1036790:intron | 50.0% | |
| AAAGAGAGAGTCGCAGGTTC+AGG | - | chr7_1:73232618-73232637 | Msa1036790:intron | 50.0% | |
| AAGAGAGAGTCGCAGGTTCA+GGG | - | chr7_1:73232619-73232638 | Msa1036790:intron | 50.0% | |
| CTGAACAAGGAGAAGGACGT+AGG | - | chr7_1:73232645-73232664 | Msa1036790:intron | 50.0% | |
| ! | TGAGATCACCCTCTCTGAAG+CGG | + | chr7_1:73232697-73232716 | None:intergenic | 50.0% |
| TTATGCTCAGTGCTCACCCT+AGG | + | chr7_1:73232830-73232849 | None:intergenic | 50.0% | |
| TGAGAGGAAGGGGAGAACAA+AGG | - | chr7_1:73232992-73233011 | Msa1036790:intron | 50.0% | |
| GGGAGAACAAAGGAGAGGAA+GGG | - | chr7_1:73233002-73233021 | Msa1036790:intron | 50.0% | |
| AGGAACGAAGACGAGGAGAA+GGG | - | chr7_1:73233129-73233148 | Msa1036790:intron | 50.0% | |
| GAAGGGAGCCATTGTCAAAG+TGG | - | chr7_1:73233146-73233165 | Msa1036790:intron | 50.0% | |
| GGAGCCATTGTCAAAGTGGA+AGG | - | chr7_1:73233150-73233169 | Msa1036790:intron | 50.0% | |
| GCCATTGTCAAAGTGGAAGG+AGG | - | chr7_1:73233153-73233172 | Msa1036790:intron | 50.0% | |
| AAGATGAAGAGGACGAGTGG+AGG | - | chr7_1:73233247-73233266 | Msa1036790:intron | 50.0% | |
| GAAAAGCAGAAGAGGGGAAG+AGG | - | chr7_1:73233284-73233303 | Msa1036790:intron | 50.0% | |
| ! | GCTTGTGGGTTGTAGATGTC+AGG | + | chr7_1:73233420-73233439 | None:intergenic | 50.0% |
| GACATCTACAACCCACAAGC+TGG | - | chr7_1:73233420-73233439 | Msa1036790:intron | 50.0% | |
| ! | CTAAGACTCAGTGCTGAGCA+TGG | - | chr7_1:73233489-73233508 | Msa1036790:intron | 50.0% |
| TGGCAACACTGTGTTCGATG+AGG | - | chr7_1:73233723-73233742 | Msa1036790:intron | 50.0% | |
| TTCGATGAGGAGCTAGAAGC+TGG | - | chr7_1:73233736-73233755 | Msa1036790:intron | 50.0% | |
| CAGCAAAATCAGTGAGCGAC+AGG | - | chr7_1:73233794-73233813 | Msa1036790:intron | 50.0% | |
| GAGCGACAGGTTCACTTATG+TGG | - | chr7_1:73233807-73233826 | Msa1036790:intron | 50.0% | |
| GGGACACAATCCACTCTAAG+TGG | - | chr7_1:73233871-73233890 | Msa1036790:CDS | 50.0% | |
| ACATGGACAGGAATGAGGCA+AGG | - | chr7_1:73233926-73233945 | Msa1036790:CDS | 50.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr7_1:73231558-73231577 | None:intergenic | 55.0% | |
| !!! | GGCTGCTGCTGCTTTTGATG+AGG | + | chr7_1:73232213-73232232 | None:intergenic | 55.0% |
| CAAAGGTCTCAGGACAACCC+GGG | + | chr7_1:73232577-73232596 | None:intergenic | 55.0% | |
| GGGTTGTCCTGAGACCTTTG+AGG | - | chr7_1:73232577-73232596 | Msa1036790:intron | 55.0% | |
| TGTGGCTCCTCAAAGGTCTC+AGG | + | chr7_1:73232587-73232606 | None:intergenic | 55.0% | |
| ! | TGAGACCTTTGAGGAGCCAC+AGG | - | chr7_1:73232586-73232605 | Msa1036790:intron | 55.0% |
| GGAAGGGGAGAACAAAGGAG+AGG | - | chr7_1:73232997-73233016 | Msa1036790:intron | 55.0% | |
| GGGGAGAACAAAGGAGAGGA+AGG | - | chr7_1:73233001-73233020 | Msa1036790:intron | 55.0% | |
| TCAAGGCAGGAACGAAGACG+AGG | - | chr7_1:73233122-73233141 | Msa1036790:intron | 55.0% | |
| CAGGAACGAAGACGAGGAGA+AGG | - | chr7_1:73233128-73233147 | Msa1036790:intron | 55.0% | |
| GGCGTTGTTGTCTCTCTGGA+GGG | + | chr7_1:73233194-73233213 | None:intergenic | 55.0% | |
| TGGCGTTGTTGTCTCTCTGG+AGG | + | chr7_1:73233195-73233214 | None:intergenic | 55.0% | |
| CTTCATCTTGTCTGCTGGGG+TGG | + | chr7_1:73233215-73233234 | None:intergenic | 55.0% | |
| ATGAAGAGGACGAGTGGAGG+CGG | - | chr7_1:73233250-73233269 | Msa1036790:intron | 55.0% | |
| TGCCAGGCTTCACCAGAACA+TGG | - | chr7_1:73233380-73233399 | Msa1036790:intron | 55.0% | |
| GACCATGTTCTGGTGAAGCC+TGG | + | chr7_1:73233385-73233404 | None:intergenic | 55.0% | |
| GTCTTAGCCACCTGAGAGCT+GGG | + | chr7_1:73233476-73233495 | None:intergenic | 55.0% | |
| AGTCTTAGCCACCTGAGAGC+TGG | + | chr7_1:73233477-73233496 | None:intergenic | 55.0% | |
| CTGCCATTGCTAGGCTTGCA+GGG | - | chr7_1:73233851-73233870 | Msa1036790:intron | 55.0% | |
| TGTCCCTGCAAGCCTAGCAA+TGG | + | chr7_1:73233857-73233876 | None:intergenic | 55.0% | |
| CACTGGCATCCCACTTAGAG+TGG | + | chr7_1:73233884-73233903 | None:intergenic | 55.0% | |
| CACTCTAAGTGGGATGCCAG+TGG | - | chr7_1:73233882-73233901 | Msa1036790:CDS | 55.0% | |
| GTAGCTGCAAGCACATCCAC+TGG | + | chr7_1:73233901-73233920 | None:intergenic | 55.0% | |
| !! | GTCAGGATGCTGATGGTGGC+AGG | - | chr7_1:73230795-73230814 | Msa1036790:CDS | 60.0% |
| ! | CGGCAATGACTGGAGTGTCC+TGG | + | chr7_1:73232760-73232779 | None:intergenic | 60.0% |
| GGGTGGCGTTGTTGTCTCTC+TGG | + | chr7_1:73233198-73233217 | None:intergenic | 60.0% | |
| !!! | ATTTTTGGCCTCGGCGGCAG+GGG | + | chr7_1:73233317-73233336 | None:intergenic | 60.0% |
| !!! | CATTTTTGGCCTCGGCGGCA+GGG | + | chr7_1:73233318-73233337 | None:intergenic | 60.0% |
| !!! | ACATTTTTGGCCTCGGCGGC+AGG | + | chr7_1:73233319-73233338 | None:intergenic | 60.0% |
| GAGAGCTGGGAGGTCAAAGC+TGG | + | chr7_1:73233463-73233482 | None:intergenic | 60.0% | |
| GCTTTGACCTCCCAGCTCTC+AGG | - | chr7_1:73233463-73233482 | Msa1036790:intron | 60.0% | |
| TTGACCTCCCAGCTCTCAGG+TGG | - | chr7_1:73233466-73233485 | Msa1036790:intron | 60.0% | |
| TTAGCCACCTGAGAGCTGGG+AGG | + | chr7_1:73233473-73233492 | None:intergenic | 60.0% | |
| GCTGCCATTGCTAGGCTTGC+AGG | - | chr7_1:73233850-73233869 | Msa1036790:intron | 60.0% | |
| CAACGTTCGGACTCACGGGG+TGG | + | chr7_1:73233988-73234007 | None:intergenic | 65.0% | |
| !!! | GAAGAGCGCCCCTGCCGCCG+AGG | - | chr7_1:73233306-73233325 | Msa1036790:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73230662 | 73234008 | 73230662 | ID=Msa1036790;Name=Msa1036790 |
| chr7_1 | mRNA | 73230662 | 73234008 | 73230662 | ID=Msa1036790-mRNA-1;Parent=Msa1036790;Name=Msa1036790-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.8|1|1|5|0|549 |
| chr7_1 | exon | 73233854 | 73234008 | 73233854 | ID=Msa1036790-mRNA-1:exon:18003;Parent=Msa1036790-mRNA-1 |
| chr7_1 | exon | 73232229 | 73232470 | 73232229 | ID=Msa1036790-mRNA-1:exon:18002;Parent=Msa1036790-mRNA-1 |
| chr7_1 | exon | 73231838 | 73232121 | 73231838 | ID=Msa1036790-mRNA-1:exon:18001;Parent=Msa1036790-mRNA-1 |
| chr7_1 | exon | 73231146 | 73231736 | 73231146 | ID=Msa1036790-mRNA-1:exon:18000;Parent=Msa1036790-mRNA-1 |
| chr7_1 | exon | 73230662 | 73231039 | 73230662 | ID=Msa1036790-mRNA-1:exon:17999;Parent=Msa1036790-mRNA-1 |
| chr7_1 | CDS | 73233854 | 73234008 | 73233854 | ID=Msa1036790-mRNA-1:cds;Parent=Msa1036790-mRNA-1 |
| chr7_1 | CDS | 73232229 | 73232470 | 73232229 | ID=Msa1036790-mRNA-1:cds;Parent=Msa1036790-mRNA-1 |
| chr7_1 | CDS | 73231838 | 73232121 | 73231838 | ID=Msa1036790-mRNA-1:cds;Parent=Msa1036790-mRNA-1 |
| chr7_1 | CDS | 73231146 | 73231736 | 73231146 | ID=Msa1036790-mRNA-1:cds;Parent=Msa1036790-mRNA-1 |
| chr7_1 | CDS | 73230662 | 73231039 | 73230662 | ID=Msa1036790-mRNA-1:cds;Parent=Msa1036790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
