Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149390 | RHN48213.1 | 86.404 | 559 | 45 | 6 | 14 | 559 | 20 | 560 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149390 | sp|P02857|LEGA_PEA | 70.968 | 527 | 104 | 7 | 54 | 559 | 19 | 517 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149390 | A0A396H636 | 86.404 | 559 | 45 | 6 | 14 | 559 | 20 | 560 | 0.0 | 855 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1036780 | Msa1149390 | 0.864309 | 1.333890e-64 | -8.615850e-47 |
| Msa1036790 | Msa1149390 | 0.834766 | 2.479139e-56 | -8.615850e-47 |
| Msa1077110 | Msa1149390 | 0.807634 | 4.592795e-50 | -8.615850e-47 |
| Msa1077120 | Msa1149390 | 0.815208 | 1.039806e-51 | -8.615850e-47 |
| Msa1077210 | Msa1149390 | 0.805195 | 1.501164e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149390 | MtrunA17_Chr7g0261351 | 86.404 | 559 | 45 | 6 | 14 | 559 | 20 | 560 | 0.0 | 855 |
| Msa1149390 | MtrunA17_Chr1g0185841 | 41.835 | 545 | 240 | 12 | 72 | 550 | 29 | 562 | 2.55e-131 | 395 |
| Msa1149390 | MtrunA17_Chr1g0185811 | 40.357 | 560 | 243 | 11 | 72 | 550 | 29 | 578 | 1.42e-124 | 378 |
| Msa1149390 | MtrunA17_Chr7g0261321 | 38.623 | 523 | 252 | 8 | 70 | 550 | 28 | 523 | 4.48e-119 | 362 |
| Msa1149390 | MtrunA17_Chr1g0185821 | 40.927 | 518 | 246 | 8 | 72 | 539 | 29 | 536 | 4.57e-119 | 362 |
| Msa1149390 | MtrunA17_Chr1g0183891 | 41.304 | 184 | 101 | 3 | 328 | 506 | 41 | 222 | 2.35e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149390 | AT5G44120.3 | 39.451 | 474 | 229 | 7 | 72 | 543 | 34 | 451 | 7.30e-109 | 334 |
| Msa1149390 | AT1G03880.1 | 38.333 | 480 | 227 | 9 | 63 | 539 | 21 | 434 | 4.26e-95 | 298 |
| Msa1149390 | AT5G44120.2 | 38.958 | 403 | 188 | 7 | 143 | 543 | 1 | 347 | 2.44e-86 | 272 |
| Msa1149390 | AT1G03890.1 | 32.720 | 489 | 262 | 7 | 52 | 539 | 13 | 435 | 1.72e-84 | 270 |
| Msa1149390 | AT4G28520.1 | 35.616 | 365 | 184 | 5 | 179 | 543 | 189 | 502 | 1.98e-67 | 228 |
| Msa1149390 | AT4G28520.1 | 40.449 | 89 | 52 | 1 | 69 | 156 | 31 | 119 | 1.97e-15 | 79.7 |
| Msa1149390 | AT5G44120.1 | 36.977 | 311 | 144 | 6 | 235 | 543 | 4 | 264 | 1.26e-57 | 194 |
| Msa1149390 | AT4G28520.5 | 30.848 | 389 | 187 | 6 | 71 | 428 | 34 | 371 | 1.97e-50 | 178 |
| Msa1149390 | AT4G28520.3 | 41.216 | 148 | 87 | 0 | 396 | 543 | 284 | 431 | 5.23e-36 | 140 |
| Msa1149390 | AT4G28520.3 | 40.449 | 89 | 52 | 1 | 69 | 156 | 31 | 119 | 1.12e-15 | 80.1 |
| Msa1149390 | AT4G28520.3 | 46.667 | 60 | 32 | 0 | 179 | 238 | 189 | 248 | 6.17e-12 | 68.6 |
| Msa1149390 | AT4G28520.2 | 33.600 | 250 | 115 | 5 | 179 | 428 | 189 | 387 | 1.20e-31 | 127 |
| Msa1149390 | AT4G28520.2 | 39.535 | 86 | 52 | 0 | 71 | 156 | 34 | 119 | 1.44e-15 | 79.3 |
| Msa1149390 | AT4G28520.4 | 33.600 | 250 | 115 | 5 | 179 | 428 | 189 | 387 | 1.35e-31 | 126 |
| Msa1149390 | AT4G28520.4 | 40.449 | 89 | 52 | 1 | 69 | 156 | 31 | 119 | 1.35e-15 | 79.3 |
Find 135 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAGGTAGTGGATATTT+TGG | 0.189498 | 7_4:+30639889 | Msa1149390:intron |
| GCATCTCATCAAGTTGATTT+TGG | 0.194708 | 7_4:-30640152 | None:intergenic |
| TTCCTACCGGTACTGTATTT+TGG | 0.198276 | 7_4:+30640070 | Msa1149390:CDS |
| CTCTGAAGCGGTTAACCTTT+TGG | 0.227280 | 7_4:-30640029 | None:intergenic |
| ATCTTCTTCATCTTGTCTGC+TGG | 0.238556 | 7_4:-30640564 | None:intergenic |
| CATCTGAATTGTCTGTTGTT+TGG | 0.280692 | 7_4:-30639671 | None:intergenic |
| TGGCTTCAAGAGGGATTTCT+TGG | 0.297875 | 7_4:+30640406 | Msa1149390:CDS |
| GCTGCCATTGCTAGGCTTGC+AGG | 0.308997 | 7_4:+30641197 | Msa1149390:CDS |
| ACCAAGATTGCTGGATTTAT+CGG | 0.343955 | 7_4:+30638096 | Msa1149390:CDS |
| AAAGAGAGAGTCGCAGGTTC+AGG | 0.353682 | 7_4:+30639965 | Msa1149390:CDS |
| TCTGACTCTATACGGTTATC+AGG | 0.356503 | 7_4:-30639623 | None:intergenic |
| GGGGAGAACAAAGGAGAGGA+AGG | 0.357587 | 7_4:+30640348 | Msa1149390:CDS |
| TCTTCTTCATCTTGTCTGCT+GGG | 0.361536 | 7_4:-30640563 | None:intergenic |
| GCCGTTTCTCTTATTGATAC+TGG | 0.366921 | 7_4:+30640123 | Msa1149390:CDS |
| TTGACTGTCACCAAGATTGC+TGG | 0.367012 | 7_4:+30638087 | Msa1149390:CDS |
| TGACAGAGATTCTATCTTGC+TGG | 0.375161 | 7_4:+30640275 | Msa1149390:intron |
| AAGATGCATTGAACGTGAAC+AGG | 0.383240 | 7_4:+30640429 | Msa1149390:CDS |
| GAAAATTTCTTGAGGAGCAT+TGG | 0.398726 | 7_4:-30639756 | None:intergenic |
| GGGTGGCGTTGTTGTCTCTC+TGG | 0.402254 | 7_4:-30640542 | None:intergenic |
| TGCCACCTTCTGACTCTATA+CGG | 0.408552 | 7_4:-30639631 | None:intergenic |
| CAGAAACAATTTGCACTGCC+AGG | 0.417327 | 7_4:+30640711 | Msa1149390:CDS |
| ACCGATAAATCCAGCAATCT+TGG | 0.425360 | 7_4:-30638097 | None:intergenic |
| CAGGAACGAAGACGAGGAGA+AGG | 0.436632 | 7_4:+30640475 | Msa1149390:CDS |
| GCTTTGACCTCCCAGCTCTC+AGG | 0.439759 | 7_4:+30640810 | Msa1149390:CDS |
| TCCTCCTTCCACTTTGACAA+TGG | 0.447325 | 7_4:-30640501 | None:intergenic |
| AGTCTTAGCCACCTGAGAGC+TGG | 0.450799 | 7_4:-30640821 | None:intergenic |
| ATCAAAGTAACTGACCTTGT+TGG | 0.450830 | 7_4:-30639781 | None:intergenic |
| CAAAGAAGCGAGGACTAGTC+AGG | 0.453158 | 7_4:+30638131 | Msa1149390:CDS |
| GTCTTAGCCACCTGAGAGCT+GGG | 0.457608 | 7_4:-30640820 | None:intergenic |
| ATAAGAGAAACGGCAATGAC+TGG | 0.458432 | 7_4:-30640114 | None:intergenic |
| GAAAAGCAGAAGAGGGGAAG+AGG | 0.459048 | 7_4:+30640631 | Msa1149390:CDS |
| AGCTCTACGTTCGGACTCAC+GGG | 0.466635 | 7_4:-30641336 | None:intergenic |
| AGCGTAATATTAGCATTGAA+TGG | 0.476842 | 7_4:+30641017 | Msa1149390:CDS |
| TTAAGCTGCAGCTCTACGTT+CGG | 0.478255 | 7_4:-30641345 | None:intergenic |
| TGTGGCTCCTCAAAGGTCTC+AGG | 0.481154 | 7_4:-30639931 | None:intergenic |
| AAAGTGAAGGATTGCAAGAA+GGG | 0.484187 | 7_4:-30638039 | None:intergenic |
| ATGAAGATGAGACCATGTTC+TGG | 0.486320 | 7_4:-30640739 | None:intergenic |
| CTTCATCTTGTCTGCTGGGG+TGG | 0.487224 | 7_4:-30640559 | None:intergenic |
| CAACAACAAGTGAGAGGAAG+GGG | 0.490614 | 7_4:+30640329 | Msa1149390:CDS |
| GCCAGTATCAATAAGAGAAA+CGG | 0.493583 | 7_4:-30640124 | None:intergenic |
| ATGATAATGCTGCCATTGCT+AGG | 0.494110 | 7_4:+30641189 | Msa1149390:CDS |
| CTATACGGTTATCAGGTTCA+AGG | 0.495690 | 7_4:-30639616 | None:intergenic |
| GGGTTGTCCTGAGACCTTTG+AGG | 0.496834 | 7_4:+30639924 | Msa1149390:CDS |
| GAAGAGCGCCCCTGCCGCCG+AGG | 0.510029 | 7_4:+30640653 | Msa1149390:CDS |
| AGATGAAGATGAAGATGAAG+AGG | 0.510375 | 7_4:+30640583 | Msa1149390:CDS |
| GAGAGCTGGGAGGTCAAAGC+TGG | 0.514503 | 7_4:-30640807 | None:intergenic |
| CAGCAAAATCAGTGAGCGAC+AGG | 0.515977 | 7_4:+30641141 | Msa1149390:CDS |
| AGATTCCTGTGGCTCCTCAA+AGG | 0.516882 | 7_4:-30639938 | None:intergenic |
| TGAGGAGCATTGGAGTAGAA+TGG | 0.517059 | 7_4:-30639746 | None:intergenic |
| AGCAATGGCAGCATTATCAT+TGG | 0.517614 | 7_4:-30641186 | None:intergenic |
| GACAGAGATTCTATCTTGCT+GGG | 0.518681 | 7_4:+30640276 | Msa1149390:intron |
| ATGAAGATGAAGAGGACGAG+TGG | 0.519387 | 7_4:+30640591 | Msa1149390:CDS |
| AAGAGAGAGTCGCAGGTTCA+GGG | 0.521011 | 7_4:+30639966 | Msa1149390:CDS |
| CTGCCATTGCTAGGCTTGCA+GGG | 0.521189 | 7_4:+30641198 | Msa1149390:CDS |
| AACAGACAATTCAGATGTGC+AGG | 0.521313 | 7_4:+30639677 | Msa1149390:CDS |
| TCAAAGGTCTCAGGACAACC+CGG | 0.526522 | 7_4:-30639922 | None:intergenic |
| CGGCAATGACTGGAGTGTCC+TGG | 0.528720 | 7_4:-30640104 | None:intergenic |
| TTCGACGAGGAGCTAGAAGC+TGG | 0.530067 | 7_4:+30641083 | Msa1149390:CDS |
| GGCGTTGTTGTCTCTCTGGA+GGG | 0.532511 | 7_4:-30640538 | None:intergenic |
| CAGCTACATTCAACATGGAC+AGG | 0.533471 | 7_4:+30641261 | Msa1149390:CDS |
| GTCAGGATGCTGATGGTGGC+AGG | 0.533662 | 7_4:+30638148 | Msa1149390:CDS |
| ATGAAGAGGACGAGTGGAGG+CGG | 0.533847 | 7_4:+30640597 | Msa1149390:CDS |
| AAAAGTGAAGGATTGCAAGA+AGG | 0.534874 | 7_4:-30638040 | None:intergenic |
| ATCAACTTGATGAGATGCCT+AGG | 0.535577 | 7_4:+30640157 | Msa1149390:CDS |
| AGCAACAACAAGTGAGAGGA+AGG | 0.535707 | 7_4:+30640327 | Msa1149390:CDS |
| GCTTGTGGGTTGTAGATGTC+AGG | 0.536179 | 7_4:-30640764 | None:intergenic |
| GACATCTACAACCCACAAGC+TGG | 0.543748 | 7_4:+30640767 | Msa1149390:CDS |
| CACTGGCATCCCACTTAGAG+TGG | 0.546537 | 7_4:-30641228 | None:intergenic |
| GTTCAGAGACAGTCACCAAA+AGG | 0.548058 | 7_4:+30640014 | Msa1149390:CDS |
| GAGCGACAGGTTCACTTATG+TGG | 0.548616 | 7_4:+30641154 | Msa1149390:CDS |
| AGGGAACAAGAAGAAAATGA+AGG | 0.549429 | 7_4:+30640368 | Msa1149390:CDS |
| TGGCGTTGTTGTCTCTCTGG+AGG | 0.551371 | 7_4:-30640539 | None:intergenic |
| GATCTCATTGCAGTTCCTAC+CGG | 0.553691 | 7_4:+30640057 | Msa1149390:CDS |
| TGAGACCTTTGAGGAGCCAC+AGG | 0.553953 | 7_4:+30639933 | Msa1149390:CDS |
| CTTCTTCATCTTGTCTGCTG+GGG | 0.554236 | 7_4:-30640562 | None:intergenic |
| GGGACACAATCCACTCTAAG+TGG | 0.554986 | 7_4:+30641218 | Msa1149390:CDS |
| GACCATGTTCTGGTGAAGCC+TGG | 0.558245 | 7_4:-30640729 | None:intergenic |
| ATCATCAGAAAAGCAGAAGA+GGG | 0.559051 | 7_4:+30640624 | Msa1149390:CDS |
| AAGGTGGCATTATTGAGACT+TGG | 0.560213 | 7_4:+30639645 | Msa1149390:CDS |
| CTGAACAAAGAGAGAGTCGC+AGG | 0.561151 | 7_4:+30639959 | Msa1149390:CDS |
| GAAGGGAGCCATTGTCAAAG+TGG | 0.561778 | 7_4:+30640493 | Msa1149390:CDS |
| CATCATCAGAAAAGCAGAAG+AGG | 0.567506 | 7_4:+30640623 | Msa1149390:CDS |
| TCTCTTTGTTCAGATTCCTG+TGG | 0.573636 | 7_4:-30639949 | None:intergenic |
| GGAAGGGGAGAACAAAGGAG+AGG | 0.578313 | 7_4:+30640344 | Msa1149390:CDS |
| AGGAACGAAGACGAGGAGAA+GGG | 0.580851 | 7_4:+30640476 | Msa1149390:CDS |
| GGGAGAACAAAGGAGAGGAA+GGG | 0.584205 | 7_4:+30640349 | Msa1149390:CDS |
| ATTCAACATGGACAGGAATG+AGG | 0.590592 | 7_4:+30641268 | Msa1149390:CDS |
| TGCCAGGCTTCACCAGAACA+TGG | 0.593210 | 7_4:+30640727 | Msa1149390:CDS |
| CTAAGACTCAGTGCTGAGCA+TGG | 0.593269 | 7_4:+30640836 | Msa1149390:CDS |
| AAGGTTAACCGCTTCAGAGA+GGG | 0.593895 | 7_4:+30640033 | Msa1149390:CDS |
| GGAGCCATTGTCAAAGTGGA+AGG | 0.595071 | 7_4:+30640497 | Msa1149390:CDS |
| TGAGATCACCCTCTCTGAAG+CGG | 0.596806 | 7_4:-30640041 | None:intergenic |
| TATACGGTTATCAGGTTCAA+GGG | 0.597531 | 7_4:-30639615 | None:intergenic |
| GTAGCTGCAAGCACATCCAC+TGG | 0.599451 | 7_4:-30641245 | None:intergenic |
| TGTTGGATGAAAATTTCTTG+AGG | 0.600246 | 7_4:-30639764 | None:intergenic |
| AGCTGACACTCATTTCGTTG+AGG | 0.603602 | 7_4:-30639578 | None:intergenic |
| TGAGAGGAAGGGGAGAACAA+AGG | 0.604422 | 7_4:+30640339 | Msa1149390:CDS |
| TTGACCTCCCAGCTCTCAGG+TGG | 0.604883 | 7_4:+30640813 | Msa1149390:CDS |
| TTGAAGAGTACAACGAGAGA+GGG | 0.608324 | 7_4:-30639705 | None:intergenic |
| AAGATGAAGAGGACGAGTGG+AGG | 0.609586 | 7_4:+30640594 | Msa1149390:CDS |
| GCAACAACAAGTGAGAGGAA+GGG | 0.610187 | 7_4:+30640328 | Msa1149390:CDS |
| GAACAAGAAGAAAATGAAGG+AGG | 0.622267 | 7_4:+30640371 | Msa1149390:CDS |
| AGGGAATCTGAACAAGGAGA+AGG | 0.623842 | 7_4:+30639985 | Msa1149390:CDS |
| GTACATCCAAAATACAGTAC+CGG | 0.624828 | 7_4:-30640076 | None:intergenic |
| TAGCATTGAATGGACGTGCA+AGG | 0.625592 | 7_4:+30641027 | Msa1149390:CDS |
| AGATGCATTGAACGTGAACA+GGG | 0.625997 | 7_4:+30640430 | Msa1149390:CDS |
| TCAACTTGATGAGATGCCTA+GGG | 0.627421 | 7_4:+30640158 | Msa1149390:CDS |
| GCCATTGTCAAAGTGGAAGG+AGG | 0.628414 | 7_4:+30640500 | Msa1149390:CDS |
| CAAAGGTCTCAGGACAACCC+GGG | 0.629938 | 7_4:-30639921 | None:intergenic |
| CATGGCGCACTCTAGTAAGA+CGG | 0.631839 | 7_4:+30638014 | None:intergenic |
| TGTCCCTGCAAGCCTAGCAA+TGG | 0.632591 | 7_4:-30641201 | None:intergenic |
| CTACAAGTAGTGAACTGCAA+TGG | 0.634940 | 7_4:+30641050 | Msa1149390:CDS |
| CTACGTTCGGACTCACGGGG+TGG | 0.640813 | 7_4:-30641332 | None:intergenic |
| GTTGAAGAGTACAACGAGAG+AGG | 0.643187 | 7_4:-30639706 | None:intergenic |
| ACTAGTCAGGATGCTGATGG+TGG | 0.646285 | 7_4:+30638144 | Msa1149390:CDS |
| ACATGGACAGGAATGAGGCA+AGG | 0.649331 | 7_4:+30641273 | Msa1149390:CDS |
| GGACACAATCCACTCTAAGT+GGG | 0.651552 | 7_4:+30641219 | Msa1149390:CDS |
| CAAAATCTTGCAAAGAAGCG+AGG | 0.654509 | 7_4:+30638121 | Msa1149390:CDS |
| TATCAGCAACAACAAGTGAG+AGG | 0.656929 | 7_4:+30640323 | Msa1149390:CDS |
| AGGTTCAGGGAATCTGAACA+AGG | 0.656969 | 7_4:+30639979 | Msa1149390:CDS |
| TCAAGGCAGGAACGAAGACG+AGG | 0.664269 | 7_4:+30640469 | Msa1149390:CDS |
| GCTTGCAGCTACATTCAACA+TGG | 0.668251 | 7_4:+30641256 | Msa1149390:CDS |
| TGTGAAAGAGAAAGACGCAA+CGG | 0.673639 | 7_4:+30640683 | Msa1149390:CDS |
| AGGACTAGTCAGGATGCTGA+TGG | 0.675850 | 7_4:+30638141 | Msa1149390:CDS |
| TCATCAGAAAAGCAGAAGAG+GGG | 0.679443 | 7_4:+30640625 | Msa1149390:CDS |
| AACCGTATAGAGTCAGAAGG+TGG | 0.682330 | 7_4:+30639629 | Msa1149390:CDS |
| CTGAACAAGGAGAAGGACGT+AGG | 0.683262 | 7_4:+30639992 | Msa1149390:CDS |
| GATAACCGTATAGAGTCAGA+AGG | 0.693081 | 7_4:+30639626 | Msa1149390:CDS |
| AAAGGTTAACCGCTTCAGAG+AGG | 0.693271 | 7_4:+30640032 | Msa1149390:CDS |
| ATCCAAAATACAGTACCGGT+AGG | 0.700412 | 7_4:-30640072 | None:intergenic |
| TGGCAACACTGTGTTCGACG+AGG | 0.708935 | 7_4:+30641070 | Msa1149390:CDS |
| TTTGCATTGAGATTGTAGTG+AGG | 0.715037 | 7_4:-30640993 | None:intergenic |
| GCTCTACGTTCGGACTCACG+GGG | 0.716198 | 7_4:-30641335 | None:intergenic |
| CATTGGAGTAGAATGGTCTG+CGG | 0.722604 | 7_4:-30639739 | None:intergenic |
| TTAGCCACCTGAGAGCTGGG+AGG | 0.734436 | 7_4:-30640817 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGAGTATAATTTATAAA+AGG | + | chr7_4:30638815-30638834 | Msa1149390:intron | 10.0% |
| !! | ATGAATTATATATTCATATA+TGG | + | chr7_4:30639156-30639175 | Msa1149390:intron | 10.0% |
| !!! | TTAATTTGATGTGAATAAAA+AGG | - | chr7_4:30638296-30638315 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCATGAGAAAAAT+TGG | + | chr7_4:30638432-30638451 | Msa1149390:intron | 15.0% |
| !!! | TTTTTTTCATGAGAAAAATT+GGG | + | chr7_4:30638433-30638452 | Msa1149390:intron | 15.0% |
| !!! | GTAATTTTTTTATCATTTGT+TGG | - | chr7_4:30638571-30638590 | None:intergenic | 15.0% |
| !!! | TACTCAAATTCAATTTTTAA+AGG | - | chr7_4:30638804-30638823 | None:intergenic | 15.0% |
| !!! | TTGTTACATTAGATTTTTAA+AGG | + | chr7_4:30638866-30638885 | Msa1149390:intron | 15.0% |
| !!! | TAAAAGATAAAGTATTTGTT+TGG | + | chr7_4:30640235-30640254 | Msa1149390:intron | 15.0% |
| !!! | TTTTTTCATGAGAAAAATTG+GGG | + | chr7_4:30638434-30638453 | Msa1149390:intron | 20.0% |
| !!! | AAAACTTTTCAGATTTTTTC+AGG | - | chr7_4:30638598-30638617 | None:intergenic | 20.0% |
| !!! | CTTTTGAATGATCAAATTAA+AGG | - | chr7_4:30638843-30638862 | None:intergenic | 20.0% |
| !!! | CTTTAATTTGATCATTCAAA+AGG | + | chr7_4:30638841-30638860 | Msa1149390:intron | 20.0% |
| !! | AAAAGAAAAAACATACTCTA+TGG | - | chr7_4:30640868-30640887 | None:intergenic | 20.0% |
| !! | TTTTTCATGAGAAAAATTGG+GGG | + | chr7_4:30638435-30638454 | Msa1149390:intron | 25.0% |
| !! | TTTTAATATGATTCAGGTCA+TGG | - | chr7_4:30638482-30638501 | None:intergenic | 25.0% |
| !! | TGGTTCTTTTAATATGATTC+AGG | - | chr7_4:30638488-30638507 | None:intergenic | 25.0% |
| !! | AGATTAGTTATCAACAAAGT+CGG | - | chr7_4:30638681-30638700 | None:intergenic | 25.0% |
| ! | TCTTGTGTATAGAAAAAATG+TGG | - | chr7_4:30638752-30638771 | None:intergenic | 25.0% |
| !! | TTAAAGGTTTCTTTTAAGCA+AGG | - | chr7_4:30638788-30638807 | None:intergenic | 25.0% |
| !! | TCTACTCTTATAATTTTGTC+TGG | + | chr7_4:30639213-30639232 | Msa1149390:intron | 25.0% |
| !! | ATAATTTTGTCTGGTTATCA+TGG | + | chr7_4:30639222-30639241 | Msa1149390:intron | 25.0% |
| ! | TATAAATTCCCATGCAATTA+AGG | + | chr7_4:30639413-30639432 | Msa1149390:intron | 25.0% |
| ! | TGTAATGTAGGTAAAGATAT+TGG | - | chr7_4:30639813-30639832 | None:intergenic | 25.0% |
| ! | CTAATATATGCATGTAATGT+AGG | - | chr7_4:30639825-30639844 | None:intergenic | 25.0% |
| !!! | TTTTTTACTATACCCATTAC+AGG | + | chr7_4:30639874-30639893 | Msa1149390:intron | 25.0% |
| ! | GATATAGTTGAAAAACTTCA+AGG | + | chr7_4:30640452-30640471 | Msa1149390:CDS | 25.0% |
| !! | TCTTTTAGCATCAACATTAT+AGG | + | chr7_4:30640918-30640937 | Msa1149390:intron | 25.0% |
| AACATCAAGTGAAAAAGTGA+AGG | - | chr7_4:30638055-30638074 | None:intergenic | 30.0% | |
| AGTGAGACCACAAATATTAT+GGG | - | chr7_4:30638178-30638197 | None:intergenic | 30.0% | |
| TAGTGAGACCACAAATATTA+TGG | - | chr7_4:30638179-30638198 | None:intergenic | 30.0% | |
| CTAATTACTAACTGAAGCAT+TGG | + | chr7_4:30638196-30638215 | Msa1149390:intron | 30.0% | |
| !! | AACAGTAAAGTGTTGAGAAA+TGG | - | chr7_4:30638414-30638433 | None:intergenic | 30.0% |
| ! | TTTTCATGAGAAAAATTGGG+GGG | + | chr7_4:30638436-30638455 | Msa1149390:intron | 30.0% |
| AAGAACCAAGTTAATCAGTA+TGG | + | chr7_4:30638500-30638519 | Msa1149390:intron | 30.0% | |
| AGAACCAAGTTAATCAGTAT+GGG | + | chr7_4:30638501-30638520 | Msa1149390:intron | 30.0% | |
| ATAGAAAAAATGTGGTTGGA+AGG | - | chr7_4:30638744-30638763 | None:intergenic | 30.0% | |
| GTGTATAGAAAAAATGTGGT+TGG | - | chr7_4:30638748-30638767 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr7_4:30639065-30639084 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr7_4:30639068-30639087 | Msa1149390:intron | 30.0% | |
| ATACTCATTCTATCCAATCA+TGG | + | chr7_4:30639469-30639488 | Msa1149390:intron | 30.0% | |
| TGTTGGATGAAAATTTCTTG+AGG | - | chr7_4:30639767-30639786 | None:intergenic | 30.0% | |
| ! | CAAGAAATTTTCATCCAACA+AGG | + | chr7_4:30639767-30639786 | Msa1149390:CDS | 30.0% |
| AAATATCCACTACCTGTAAT+GGG | - | chr7_4:30639889-30639908 | None:intergenic | 30.0% | |
| AAAATATCCACTACCTGTAA+TGG | - | chr7_4:30639890-30639909 | None:intergenic | 30.0% | |
| !!! | ATTACAGGTAGTGGATATTT+TGG | + | chr7_4:30639889-30639908 | Msa1149390:intron | 30.0% |
| ATTGTAAAAACTCTTGCTCT+TGG | - | chr7_4:30640304-30640323 | None:intergenic | 30.0% | |
| ! | GTCTTTCTCTTTCACATTTT+TGG | - | chr7_4:30640679-30640698 | None:intergenic | 30.0% |
| AGATTGACATAAAACGAATC+TGG | - | chr7_4:30640901-30640920 | None:intergenic | 30.0% | |
| !! | AACATTATAGGAAGTGTTCA+AGG | + | chr7_4:30640930-30640949 | Msa1149390:intron | 30.0% |
| ! | AGCGTAATATTAGCATTGAA+TGG | + | chr7_4:30641017-30641036 | Msa1149390:CDS | 30.0% |
| AAAGTGAAGGATTGCAAGAA+GGG | - | chr7_4:30638042-30638061 | None:intergenic | 35.0% | |
| AAAAGTGAAGGATTGCAAGA+AGG | - | chr7_4:30638043-30638062 | None:intergenic | 35.0% | |
| ACCAAGATTGCTGGATTTAT+CGG | + | chr7_4:30638096-30638115 | Msa1149390:CDS | 35.0% | |
| GTGAGACCACAAATATTATG+GGG | - | chr7_4:30638177-30638196 | None:intergenic | 35.0% | |
| !! | GTTTATAGGGGCTTTAGAAA+AGG | + | chr7_4:30638224-30638243 | Msa1149390:intron | 35.0% |
| TAACTACATGTTGCATTGCA+TGG | + | chr7_4:30638325-30638344 | Msa1149390:intron | 35.0% | |
| TGTTGAGAAATGGATGACAA+GGG | - | chr7_4:30638404-30638423 | None:intergenic | 35.0% | |
| AAGTTAATCAGTATGGGTCA+CGG | + | chr7_4:30638507-30638526 | Msa1149390:intron | 35.0% | |
| TGACACTAGTTACAAAGACT+TGG | - | chr7_4:30638534-30638553 | None:intergenic | 35.0% | |
| TTAGTTATCAACAAAGTCGG+TGG | - | chr7_4:30638678-30638697 | None:intergenic | 35.0% | |
| GAGACTCTATTAAAAGTGGT+CGG | - | chr7_4:30638720-30638739 | None:intergenic | 35.0% | |
| AGGAGAGACTCTATTAAAAG+TGG | - | chr7_4:30638724-30638743 | None:intergenic | 35.0% | |
| ! | TTTCTTTTAAGCAAGGTCTC+GGG | - | chr7_4:30638781-30638800 | None:intergenic | 35.0% |
| ! | GTTTCTTTTAAGCAAGGTCT+CGG | - | chr7_4:30638782-30638801 | None:intergenic | 35.0% |
| TTGTTACCATACAACATTGC+CGG | + | chr7_4:30638889-30638908 | Msa1149390:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr7_4:30638927-30638946 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr7_4:30638931-30638950 | Msa1149390:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr7_4:30638940-30638959 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | - | chr7_4:30639005-30639024 | None:intergenic | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr7_4:30639038-30639057 | Msa1149390:intron | 35.0% |
| GTTACACGGTTTAGATATCT+TGG | - | chr7_4:30639066-30639085 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr7_4:30639067-30639086 | Msa1149390:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr7_4:30639069-30639088 | Msa1149390:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr7_4:30639080-30639099 | None:intergenic | 35.0% | |
| ATATGATCTCCAACTTCATG+TGG | + | chr7_4:30639096-30639115 | Msa1149390:intron | 35.0% | |
| ! | GATTTTCATCCACATGAAGT+TGG | - | chr7_4:30639108-30639127 | None:intergenic | 35.0% |
| ATTTAGCTAGCTGAAATTGG+TGG | - | chr7_4:30639191-30639210 | None:intergenic | 35.0% | |
| AGCATTTAGCTAGCTGAAAT+TGG | - | chr7_4:30639194-30639213 | None:intergenic | 35.0% | |
| GAATGAGTATATGCTTATGC+TGG | - | chr7_4:30639459-30639478 | None:intergenic | 35.0% | |
| TATACGGTTATCAGGTTCAA+GGG | - | chr7_4:30639618-30639637 | None:intergenic | 35.0% | |
| CATCTGAATTGTCTGTTGTT+TGG | - | chr7_4:30639674-30639693 | None:intergenic | 35.0% | |
| ! | GAAAATTTCTTGAGGAGCAT+TGG | - | chr7_4:30639759-30639778 | None:intergenic | 35.0% |
| ATCAAAGTAACTGACCTTGT+TGG | - | chr7_4:30639784-30639803 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGCATGGTATTCC+CGG | + | chr7_4:30639903-30639922 | Msa1149390:CDS | 35.0% |
| GTACATCCAAAATACAGTAC+CGG | - | chr7_4:30640079-30640098 | None:intergenic | 35.0% | |
| ! | ATTTTGGATGTACAATGACC+AGG | + | chr7_4:30640086-30640105 | Msa1149390:CDS | 35.0% |
| GCCAGTATCAATAAGAGAAA+CGG | - | chr7_4:30640127-30640146 | None:intergenic | 35.0% | |
| !!! | GCATCTCATCAAGTTGATTT+TGG | - | chr7_4:30640155-30640174 | None:intergenic | 35.0% |
| AGGGAACAAGAAGAAAATGA+AGG | + | chr7_4:30640368-30640387 | Msa1149390:CDS | 35.0% | |
| GAACAAGAAGAAAATGAAGG+AGG | + | chr7_4:30640371-30640390 | Msa1149390:CDS | 35.0% | |
| TAGTTGAAAAACTTCAAGGC+AGG | + | chr7_4:30640456-30640475 | Msa1149390:CDS | 35.0% | |
| AGATGAAGATGAAGATGAAG+AGG | + | chr7_4:30640583-30640602 | Msa1149390:CDS | 35.0% | |
| ATCATCAGAAAAGCAGAAGA+GGG | + | chr7_4:30640624-30640643 | Msa1149390:CDS | 35.0% | |
| !! | TTTTGATTCTACCAGCTTGT+GGG | - | chr7_4:30640781-30640800 | None:intergenic | 35.0% |
| TTTGCATTGAGATTGTAGTG+AGG | - | chr7_4:30640996-30641015 | None:intergenic | 35.0% | |
| ACCGATAAATCCAGCAATCT+TGG | - | chr7_4:30638100-30638119 | None:intergenic | 40.0% | |
| CAAAATCTTGCAAAGAAGCG+AGG | + | chr7_4:30638121-30638140 | Msa1149390:CDS | 40.0% | |
| AGGTGTCCCCATAATATTTG+TGG | + | chr7_4:30638168-30638187 | Msa1149390:intron | 40.0% | |
| !! | TTACTAACTGAAGCATTGGC+TGG | + | chr7_4:30638200-30638219 | Msa1149390:intron | 40.0% |
| !! | AAGCATTGGCTGGAGTTTAT+AGG | + | chr7_4:30638210-30638229 | Msa1149390:intron | 40.0% |
| !! | AGCATTGGCTGGAGTTTATA+GGG | + | chr7_4:30638211-30638230 | Msa1149390:intron | 40.0% |
| ! | TGAACTGCTGCAGAGTATTA+TGG | - | chr7_4:30638359-30638378 | None:intergenic | 40.0% |
| GTGTTGAGAAATGGATGACA+AGG | - | chr7_4:30638405-30638424 | None:intergenic | 40.0% | |
| ! | GTGACCCATACTGATTAACT+TGG | - | chr7_4:30638508-30638527 | None:intergenic | 40.0% |
| GTACATCATCGTATTCAAGC+TGG | - | chr7_4:30639006-30639025 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr7_4:30639045-30639064 | None:intergenic | 40.0% | |
| !! | TAGCTGAAATTGGTGGTGAT+GGG | - | chr7_4:30639184-30639203 | None:intergenic | 40.0% |
| TGAGACATTGTGACTTTGTG+AGG | + | chr7_4:30639279-30639298 | Msa1149390:intron | 40.0% | |
| TTTGTGAGGTGTAATGCACA+AGG | + | chr7_4:30639293-30639312 | Msa1149390:intron | 40.0% | |
| TAGACATTCTTCATCGTGCA+TGG | - | chr7_4:30639328-30639347 | None:intergenic | 40.0% | |
| CTATACGGTTATCAGGTTCA+AGG | - | chr7_4:30639619-30639638 | None:intergenic | 40.0% | |
| TCTGACTCTATACGGTTATC+AGG | - | chr7_4:30639626-30639645 | None:intergenic | 40.0% | |
| GATAACCGTATAGAGTCAGA+AGG | + | chr7_4:30639626-30639645 | Msa1149390:CDS | 40.0% | |
| AAGGTGGCATTATTGAGACT+TGG | + | chr7_4:30639645-30639664 | Msa1149390:CDS | 40.0% | |
| AACAGACAATTCAGATGTGC+AGG | + | chr7_4:30639677-30639696 | Msa1149390:CDS | 40.0% | |
| ! | TTGAAGAGTACAACGAGAGA+GGG | - | chr7_4:30639708-30639727 | None:intergenic | 40.0% |
| ACTATACCCATTACAGGTAG+TGG | + | chr7_4:30639880-30639899 | Msa1149390:intron | 40.0% | |
| !!! | AGGTAGTGGATATTTTGGCA+TGG | + | chr7_4:30639894-30639913 | Msa1149390:intron | 40.0% |
| !!! | TATTTTGGCATGGTATTCCC+GGG | + | chr7_4:30639904-30639923 | Msa1149390:CDS | 40.0% |
| TCTCTTTGTTCAGATTCCTG+TGG | - | chr7_4:30639952-30639971 | None:intergenic | 40.0% | |
| ! | TTCCTACCGGTACTGTATTT+TGG | + | chr7_4:30640070-30640089 | Msa1149390:CDS | 40.0% |
| !! | ATCCAAAATACAGTACCGGT+AGG | - | chr7_4:30640075-30640094 | None:intergenic | 40.0% |
| ATAAGAGAAACGGCAATGAC+TGG | - | chr7_4:30640117-30640136 | None:intergenic | 40.0% | |
| GCCGTTTCTCTTATTGATAC+TGG | + | chr7_4:30640123-30640142 | Msa1149390:CDS | 40.0% | |
| ATCAACTTGATGAGATGCCT+AGG | + | chr7_4:30640157-30640176 | Msa1149390:CDS | 40.0% | |
| TCAACTTGATGAGATGCCTA+GGG | + | chr7_4:30640158-30640177 | Msa1149390:CDS | 40.0% | |
| TGACAGAGATTCTATCTTGC+TGG | + | chr7_4:30640275-30640294 | Msa1149390:intron | 40.0% | |
| GACAGAGATTCTATCTTGCT+GGG | + | chr7_4:30640276-30640295 | Msa1149390:intron | 40.0% | |
| TATCAGCAACAACAAGTGAG+AGG | + | chr7_4:30640323-30640342 | Msa1149390:CDS | 40.0% | |
| ! | ACATTTTCAGTGGCTTCAAG+AGG | + | chr7_4:30640396-30640415 | Msa1149390:CDS | 40.0% |
| ! | CATTTTCAGTGGCTTCAAGA+GGG | + | chr7_4:30640397-30640416 | Msa1149390:CDS | 40.0% |
| AAGATGCATTGAACGTGAAC+AGG | + | chr7_4:30640429-30640448 | Msa1149390:CDS | 40.0% | |
| AGATGCATTGAACGTGAACA+GGG | + | chr7_4:30640430-30640449 | Msa1149390:CDS | 40.0% | |
| TCTTCTTCATCTTGTCTGCT+GGG | - | chr7_4:30640566-30640585 | None:intergenic | 40.0% | |
| ATCTTCTTCATCTTGTCTGC+TGG | - | chr7_4:30640567-30640586 | None:intergenic | 40.0% | |
| !! | CTTCTGCTTTTCTGATGATG+TGG | - | chr7_4:30640623-30640642 | None:intergenic | 40.0% |
| CATCATCAGAAAAGCAGAAG+AGG | + | chr7_4:30640623-30640642 | Msa1149390:CDS | 40.0% | |
| TCATCAGAAAAGCAGAAGAG+GGG | + | chr7_4:30640625-30640644 | Msa1149390:CDS | 40.0% | |
| !!! | CTCTTTCACATTTTTGGCCT+CGG | - | chr7_4:30640673-30640692 | None:intergenic | 40.0% |
| TGTGAAAGAGAAAGACGCAA+CGG | + | chr7_4:30640683-30640702 | Msa1149390:CDS | 40.0% | |
| ATGAAGATGAGACCATGTTC+TGG | - | chr7_4:30640742-30640761 | None:intergenic | 40.0% | |
| !!! | GTTTTGATTCTACCAGCTTG+TGG | - | chr7_4:30640782-30640801 | None:intergenic | 40.0% |
| CTACAAGTAGTGAACTGCAA+TGG | + | chr7_4:30641050-30641069 | Msa1149390:CDS | 40.0% | |
| AGCAATGGCAGCATTATCAT+TGG | - | chr7_4:30641189-30641208 | None:intergenic | 40.0% | |
| ! | ATGATAATGCTGCCATTGCT+AGG | + | chr7_4:30641189-30641208 | Msa1149390:CDS | 40.0% |
| ATTCAACATGGACAGGAATG+AGG | + | chr7_4:30641268-30641287 | Msa1149390:CDS | 40.0% | |
| TTGACTGTCACCAAGATTGC+TGG | + | chr7_4:30638087-30638106 | Msa1149390:CDS | 45.0% | |
| !! | GCATTGGCTGGAGTTTATAG+GGG | + | chr7_4:30638212-30638231 | Msa1149390:intron | 45.0% |
| TCATGAGAAAAATTGGGGGG+AGG | + | chr7_4:30638439-30638458 | Msa1149390:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr7_4:30638960-30638979 | Msa1149390:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr7_4:30638979-30638998 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr7_4:30638993-30639012 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr7_4:30639002-30639021 | None:intergenic | 45.0% | |
| !! | AGCTGAAATTGGTGGTGATG+GGG | - | chr7_4:30639183-30639202 | None:intergenic | 45.0% |
| !! | CTAGCTGAAATTGGTGGTGA+TGG | - | chr7_4:30639185-30639204 | None:intergenic | 45.0% |
| CAGGTGGCTTCAATTCAACA+TGG | - | chr7_4:30639251-30639270 | None:intergenic | 45.0% | |
| ACAATGTCTCATTACTGCGC+AGG | - | chr7_4:30639270-30639289 | None:intergenic | 45.0% | |
| AGTGAAAGAGAGCAGTGTGA+AGG | - | chr7_4:30639394-30639413 | None:intergenic | 45.0% | |
| GCGGAGATCCTTAATTGCAT+GGG | - | chr7_4:30639424-30639443 | None:intergenic | 45.0% | |
| TGCGGAGATCCTTAATTGCA+TGG | - | chr7_4:30639425-30639444 | None:intergenic | 45.0% | |
| ! | ATGCTGGTTGTGTTGTGATG+CGG | - | chr7_4:30639443-30639462 | None:intergenic | 45.0% |
| GCAAGAAGCTTAGCCATGAT+TGG | - | chr7_4:30639485-30639504 | None:intergenic | 45.0% | |
| AGCTGACACTCATTTCGTTG+AGG | - | chr7_4:30639581-30639600 | None:intergenic | 45.0% | |
| AACCGTATAGAGTCAGAAGG+TGG | + | chr7_4:30639629-30639648 | Msa1149390:CDS | 45.0% | |
| TGCCACCTTCTGACTCTATA+CGG | - | chr7_4:30639634-30639653 | None:intergenic | 45.0% | |
| ! | GTTGAAGAGTACAACGAGAG+AGG | - | chr7_4:30639709-30639728 | None:intergenic | 45.0% |
| CATTGGAGTAGAATGGTCTG+CGG | - | chr7_4:30639742-30639761 | None:intergenic | 45.0% | |
| !! | TGAGGAGCATTGGAGTAGAA+TGG | - | chr7_4:30639749-30639768 | None:intergenic | 45.0% |
| AGGTTCAGGGAATCTGAACA+AGG | + | chr7_4:30639979-30639998 | Msa1149390:CDS | 45.0% | |
| AGGGAATCTGAACAAGGAGA+AGG | + | chr7_4:30639985-30640004 | Msa1149390:CDS | 45.0% | |
| GTTCAGAGACAGTCACCAAA+AGG | + | chr7_4:30640014-30640033 | Msa1149390:CDS | 45.0% | |
| !!! | CTCTGAAGCGGTTAACCTTT+TGG | - | chr7_4:30640032-30640051 | None:intergenic | 45.0% |
| AAAGGTTAACCGCTTCAGAG+AGG | + | chr7_4:30640032-30640051 | Msa1149390:CDS | 45.0% | |
| AAGGTTAACCGCTTCAGAGA+GGG | + | chr7_4:30640033-30640052 | Msa1149390:CDS | 45.0% | |
| GATCTCATTGCAGTTCCTAC+CGG | + | chr7_4:30640057-30640076 | Msa1149390:CDS | 45.0% | |
| AGCAACAACAAGTGAGAGGA+AGG | + | chr7_4:30640327-30640346 | Msa1149390:CDS | 45.0% | |
| GCAACAACAAGTGAGAGGAA+GGG | + | chr7_4:30640328-30640347 | Msa1149390:CDS | 45.0% | |
| CAACAACAAGTGAGAGGAAG+GGG | + | chr7_4:30640329-30640348 | Msa1149390:CDS | 45.0% | |
| ! | GAAGGAGGCAACATTTTCAG+TGG | + | chr7_4:30640386-30640405 | Msa1149390:CDS | 45.0% |
| TGGCTTCAAGAGGGATTTCT+TGG | + | chr7_4:30640406-30640425 | Msa1149390:CDS | 45.0% | |
| TCCTCCTTCCACTTTGACAA+TGG | - | chr7_4:30640504-30640523 | None:intergenic | 45.0% | |
| CTTCTTCATCTTGTCTGCTG+GGG | - | chr7_4:30640565-30640584 | None:intergenic | 45.0% | |
| ATGAAGATGAAGAGGACGAG+TGG | + | chr7_4:30640591-30640610 | Msa1149390:CDS | 45.0% | |
| !!! | TTTCACATTTTTGGCCTCGG+CGG | - | chr7_4:30640670-30640689 | None:intergenic | 45.0% |
| CAGAAACAATTTGCACTGCC+AGG | + | chr7_4:30640711-30640730 | Msa1149390:CDS | 45.0% | |
| ! | TAGCATTGAATGGACGTGCA+AGG | + | chr7_4:30641027-30641046 | Msa1149390:CDS | 45.0% |
| ! | GCTGCAACAGCAAAGTTTTG+TGG | - | chr7_4:30641125-30641144 | None:intergenic | 45.0% |
| GGACACAATCCACTCTAAGT+GGG | + | chr7_4:30641219-30641238 | Msa1149390:CDS | 45.0% | |
| GCTTGCAGCTACATTCAACA+TGG | + | chr7_4:30641256-30641275 | Msa1149390:CDS | 45.0% | |
| CAGCTACATTCAACATGGAC+AGG | + | chr7_4:30641261-30641280 | Msa1149390:CDS | 45.0% | |
| TTAAGCTGCAGCTCTACGTT+CGG | - | chr7_4:30641348-30641367 | None:intergenic | 45.0% | |
| !! | CAAAGAAGCGAGGACTAGTC+AGG | + | chr7_4:30638131-30638150 | Msa1149390:CDS | 50.0% |
| !! | AGGACTAGTCAGGATGCTGA+TGG | + | chr7_4:30638141-30638160 | Msa1149390:CDS | 50.0% |
| ACTAGTCAGGATGCTGATGG+TGG | + | chr7_4:30638144-30638163 | Msa1149390:CDS | 50.0% | |
| GAGAAAAATTGGGGGGAGGA+TGG | + | chr7_4:30638443-30638462 | Msa1149390:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr7_4:30638898-30638917 | None:intergenic | 50.0% | |
| ATGTCTCATTACTGCGCAGG+TGG | - | chr7_4:30639267-30639286 | None:intergenic | 50.0% | |
| TCAAAGGTCTCAGGACAACC+CGG | - | chr7_4:30639925-30639944 | None:intergenic | 50.0% | |
| AGATTCCTGTGGCTCCTCAA+AGG | - | chr7_4:30639941-30639960 | None:intergenic | 50.0% | |
| CTGAACAAAGAGAGAGTCGC+AGG | + | chr7_4:30639959-30639978 | Msa1149390:CDS | 50.0% | |
| AAAGAGAGAGTCGCAGGTTC+AGG | + | chr7_4:30639965-30639984 | Msa1149390:CDS | 50.0% | |
| AAGAGAGAGTCGCAGGTTCA+GGG | + | chr7_4:30639966-30639985 | Msa1149390:CDS | 50.0% | |
| CTGAACAAGGAGAAGGACGT+AGG | + | chr7_4:30639992-30640011 | Msa1149390:CDS | 50.0% | |
| ! | TGAGATCACCCTCTCTGAAG+CGG | - | chr7_4:30640044-30640063 | None:intergenic | 50.0% |
| TTATGCTCAGTGCTCACCCT+AGG | - | chr7_4:30640177-30640196 | None:intergenic | 50.0% | |
| TGAGAGGAAGGGGAGAACAA+AGG | + | chr7_4:30640339-30640358 | Msa1149390:CDS | 50.0% | |
| GGGAGAACAAAGGAGAGGAA+GGG | + | chr7_4:30640349-30640368 | Msa1149390:CDS | 50.0% | |
| AGGAACGAAGACGAGGAGAA+GGG | + | chr7_4:30640476-30640495 | Msa1149390:CDS | 50.0% | |
| GAAGGGAGCCATTGTCAAAG+TGG | + | chr7_4:30640493-30640512 | Msa1149390:CDS | 50.0% | |
| GGAGCCATTGTCAAAGTGGA+AGG | + | chr7_4:30640497-30640516 | Msa1149390:CDS | 50.0% | |
| GCCATTGTCAAAGTGGAAGG+AGG | + | chr7_4:30640500-30640519 | Msa1149390:CDS | 50.0% | |
| AAGATGAAGAGGACGAGTGG+AGG | + | chr7_4:30640594-30640613 | Msa1149390:CDS | 50.0% | |
| GAAAAGCAGAAGAGGGGAAG+AGG | + | chr7_4:30640631-30640650 | Msa1149390:CDS | 50.0% | |
| ! | GCTTGTGGGTTGTAGATGTC+AGG | - | chr7_4:30640767-30640786 | None:intergenic | 50.0% |
| GACATCTACAACCCACAAGC+TGG | + | chr7_4:30640767-30640786 | Msa1149390:CDS | 50.0% | |
| ! | CTAAGACTCAGTGCTGAGCA+TGG | + | chr7_4:30640836-30640855 | Msa1149390:CDS | 50.0% |
| CAGCAAAATCAGTGAGCGAC+AGG | + | chr7_4:30641141-30641160 | Msa1149390:CDS | 50.0% | |
| GAGCGACAGGTTCACTTATG+TGG | + | chr7_4:30641154-30641173 | Msa1149390:CDS | 50.0% | |
| GGGACACAATCCACTCTAAG+TGG | + | chr7_4:30641218-30641237 | Msa1149390:CDS | 50.0% | |
| ACATGGACAGGAATGAGGCA+AGG | + | chr7_4:30641273-30641292 | Msa1149390:CDS | 50.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr7_4:30638911-30638930 | None:intergenic | 55.0% | |
| !!! | GGCTGCTGCTGCTTTTGATG+AGG | - | chr7_4:30639560-30639579 | None:intergenic | 55.0% |
| CAAAGGTCTCAGGACAACCC+GGG | - | chr7_4:30639924-30639943 | None:intergenic | 55.0% | |
| GGGTTGTCCTGAGACCTTTG+AGG | + | chr7_4:30639924-30639943 | Msa1149390:CDS | 55.0% | |
| TGTGGCTCCTCAAAGGTCTC+AGG | - | chr7_4:30639934-30639953 | None:intergenic | 55.0% | |
| ! | TGAGACCTTTGAGGAGCCAC+AGG | + | chr7_4:30639933-30639952 | Msa1149390:CDS | 55.0% |
| GGAAGGGGAGAACAAAGGAG+AGG | + | chr7_4:30640344-30640363 | Msa1149390:CDS | 55.0% | |
| GGGGAGAACAAAGGAGAGGA+AGG | + | chr7_4:30640348-30640367 | Msa1149390:CDS | 55.0% | |
| TCAAGGCAGGAACGAAGACG+AGG | + | chr7_4:30640469-30640488 | Msa1149390:CDS | 55.0% | |
| CAGGAACGAAGACGAGGAGA+AGG | + | chr7_4:30640475-30640494 | Msa1149390:CDS | 55.0% | |
| GGCGTTGTTGTCTCTCTGGA+GGG | - | chr7_4:30640541-30640560 | None:intergenic | 55.0% | |
| TGGCGTTGTTGTCTCTCTGG+AGG | - | chr7_4:30640542-30640561 | None:intergenic | 55.0% | |
| CTTCATCTTGTCTGCTGGGG+TGG | - | chr7_4:30640562-30640581 | None:intergenic | 55.0% | |
| ATGAAGAGGACGAGTGGAGG+CGG | + | chr7_4:30640597-30640616 | Msa1149390:CDS | 55.0% | |
| TGCCAGGCTTCACCAGAACA+TGG | + | chr7_4:30640727-30640746 | Msa1149390:CDS | 55.0% | |
| GACCATGTTCTGGTGAAGCC+TGG | - | chr7_4:30640732-30640751 | None:intergenic | 55.0% | |
| GTCTTAGCCACCTGAGAGCT+GGG | - | chr7_4:30640823-30640842 | None:intergenic | 55.0% | |
| AGTCTTAGCCACCTGAGAGC+TGG | - | chr7_4:30640824-30640843 | None:intergenic | 55.0% | |
| TGGCAACACTGTGTTCGACG+AGG | + | chr7_4:30641070-30641089 | Msa1149390:CDS | 55.0% | |
| TTCGACGAGGAGCTAGAAGC+TGG | + | chr7_4:30641083-30641102 | Msa1149390:CDS | 55.0% | |
| CTGCCATTGCTAGGCTTGCA+GGG | + | chr7_4:30641198-30641217 | Msa1149390:CDS | 55.0% | |
| TGTCCCTGCAAGCCTAGCAA+TGG | - | chr7_4:30641204-30641223 | None:intergenic | 55.0% | |
| CACTGGCATCCCACTTAGAG+TGG | - | chr7_4:30641231-30641250 | None:intergenic | 55.0% | |
| CACTCTAAGTGGGATGCCAG+TGG | + | chr7_4:30641229-30641248 | Msa1149390:CDS | 55.0% | |
| GTAGCTGCAAGCACATCCAC+TGG | - | chr7_4:30641248-30641267 | None:intergenic | 55.0% | |
| AGCTCTACGTTCGGACTCAC+GGG | - | chr7_4:30641339-30641358 | None:intergenic | 55.0% | |
| CAGCTCTACGTTCGGACTCA+CGG | - | chr7_4:30641340-30641359 | None:intergenic | 55.0% | |
| !! | GTCAGGATGCTGATGGTGGC+AGG | + | chr7_4:30638148-30638167 | Msa1149390:CDS | 60.0% |
| ! | CGGCAATGACTGGAGTGTCC+TGG | - | chr7_4:30640107-30640126 | None:intergenic | 60.0% |
| GGGTGGCGTTGTTGTCTCTC+TGG | - | chr7_4:30640545-30640564 | None:intergenic | 60.0% | |
| !!! | ATTTTTGGCCTCGGCGGCAG+GGG | - | chr7_4:30640664-30640683 | None:intergenic | 60.0% |
| !!! | CATTTTTGGCCTCGGCGGCA+GGG | - | chr7_4:30640665-30640684 | None:intergenic | 60.0% |
| !!! | ACATTTTTGGCCTCGGCGGC+AGG | - | chr7_4:30640666-30640685 | None:intergenic | 60.0% |
| GAGAGCTGGGAGGTCAAAGC+TGG | - | chr7_4:30640810-30640829 | None:intergenic | 60.0% | |
| GCTTTGACCTCCCAGCTCTC+AGG | + | chr7_4:30640810-30640829 | Msa1149390:CDS | 60.0% | |
| TTGACCTCCCAGCTCTCAGG+TGG | + | chr7_4:30640813-30640832 | Msa1149390:CDS | 60.0% | |
| TTAGCCACCTGAGAGCTGGG+AGG | - | chr7_4:30640820-30640839 | None:intergenic | 60.0% | |
| GCTGCCATTGCTAGGCTTGC+AGG | + | chr7_4:30641197-30641216 | Msa1149390:CDS | 60.0% | |
| GCTCTACGTTCGGACTCACG+GGG | - | chr7_4:30641338-30641357 | None:intergenic | 60.0% | |
| CTACGTTCGGACTCACGGGG+TGG | - | chr7_4:30641335-30641354 | None:intergenic | 65.0% | |
| !!! | GAAGAGCGCCCCTGCCGCCG+AGG | + | chr7_4:30640653-30640672 | Msa1149390:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 30638015 | 30641367 | 30638015 | ID=Msa1149390;Name=Msa1149390 |
| chr7_4 | mRNA | 30638015 | 30641367 | 30638015 | ID=Msa1149390-mRNA-1;Parent=Msa1149390;Name=Msa1149390-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|0.8|1|1|5|0|559 |
| chr7_4 | exon | 30638015 | 30638169 | 30638015 | ID=Msa1149390-mRNA-1:exon:7436;Parent=Msa1149390-mRNA-1 |
| chr7_4 | exon | 30639529 | 30639788 | 30639529 | ID=Msa1149390-mRNA-1:exon:7437;Parent=Msa1149390-mRNA-1 |
| chr7_4 | exon | 30639896 | 30640179 | 30639896 | ID=Msa1149390-mRNA-1:exon:7438;Parent=Msa1149390-mRNA-1 |
| chr7_4 | exon | 30640281 | 30640871 | 30640281 | ID=Msa1149390-mRNA-1:exon:7439;Parent=Msa1149390-mRNA-1 |
| chr7_4 | exon | 30640978 | 30641367 | 30640978 | ID=Msa1149390-mRNA-1:exon:7440;Parent=Msa1149390-mRNA-1 |
| chr7_4 | CDS | 30638015 | 30638169 | 30638015 | ID=Msa1149390-mRNA-1:cds;Parent=Msa1149390-mRNA-1 |
| chr7_4 | CDS | 30639529 | 30639788 | 30639529 | ID=Msa1149390-mRNA-1:cds;Parent=Msa1149390-mRNA-1 |
| chr7_4 | CDS | 30639896 | 30640179 | 30639896 | ID=Msa1149390-mRNA-1:cds;Parent=Msa1149390-mRNA-1 |
| chr7_4 | CDS | 30640281 | 30640871 | 30640281 | ID=Msa1149390-mRNA-1:cds;Parent=Msa1149390-mRNA-1 |
| chr7_4 | CDS | 30640978 | 30641367 | 30640978 | ID=Msa1149390-mRNA-1:cds;Parent=Msa1149390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
