Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036780 | RHN48213.1 | 90.581 | 499 | 11 | 5 | 14 | 493 | 79 | 560 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036780 | sp|P02857|LEGA_PEA | 70.233 | 514 | 104 | 7 | 9 | 493 | 24 | 517 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036780 | A0A396H636 | 90.581 | 499 | 11 | 5 | 14 | 493 | 79 | 560 | 0.0 | 820 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1036780 | Msa1036790 | 0.955434 | 3.061360e-113 | -8.615850e-47 |
| Msa1036780 | Msa1077110 | 0.823027 | 1.727448e-53 | -8.615850e-47 |
| Msa1036780 | Msa1077120 | 0.827921 | 1.197382e-54 | -8.615850e-47 |
| Msa1036780 | Msa1077210 | 0.852146 | 5.588487e-61 | -8.615850e-47 |
| Msa1036780 | Msa1149390 | 0.864309 | 1.333890e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036780 | MtrunA17_Chr7g0261351 | 90.581 | 499 | 11 | 5 | 14 | 493 | 79 | 560 | 0.0 | 820 |
| Msa1036780 | MtrunA17_Chr1g0185841 | 41.284 | 545 | 235 | 13 | 14 | 484 | 29 | 562 | 1.27e-125 | 377 |
| Msa1036780 | MtrunA17_Chr1g0185811 | 39.821 | 560 | 238 | 12 | 14 | 484 | 29 | 578 | 6.94e-119 | 360 |
| Msa1036780 | MtrunA17_Chr7g0261321 | 38.050 | 523 | 247 | 9 | 12 | 484 | 28 | 523 | 9.12e-114 | 346 |
| Msa1036780 | MtrunA17_Chr1g0185821 | 40.347 | 518 | 241 | 9 | 14 | 473 | 29 | 536 | 3.35e-113 | 345 |
| Msa1036780 | MtrunA17_Chr1g0183891 | 41.304 | 184 | 101 | 3 | 262 | 440 | 41 | 222 | 9.77e-38 | 138 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1036780 | AT5G44120.3 | 38.819 | 474 | 224 | 8 | 14 | 477 | 34 | 451 | 8.39e-103 | 316 |
| Msa1036780 | AT1G03880.1 | 37.708 | 480 | 222 | 10 | 5 | 473 | 21 | 434 | 6.52e-90 | 282 |
| Msa1036780 | AT5G44120.2 | 37.965 | 403 | 184 | 8 | 85 | 477 | 1 | 347 | 2.64e-80 | 254 |
| Msa1036780 | AT1G03890.1 | 32.211 | 475 | 248 | 7 | 7 | 473 | 27 | 435 | 5.79e-80 | 256 |
| Msa1036780 | AT4G28520.1 | 34.795 | 365 | 179 | 6 | 121 | 477 | 189 | 502 | 1.29e-61 | 210 |
| Msa1036780 | AT4G28520.1 | 39.535 | 86 | 52 | 0 | 13 | 98 | 34 | 119 | 1.28e-15 | 79.7 |
| Msa1036780 | AT5G44120.1 | 36.977 | 311 | 144 | 6 | 169 | 477 | 4 | 264 | 6.19e-58 | 194 |
| Msa1036780 | AT4G28520.5 | 30.077 | 389 | 182 | 7 | 13 | 362 | 34 | 371 | 8.59e-45 | 161 |
| Msa1036780 | AT4G28520.3 | 41.216 | 148 | 87 | 0 | 330 | 477 | 284 | 431 | 3.15e-36 | 140 |
| Msa1036780 | AT4G28520.3 | 40.449 | 89 | 52 | 1 | 11 | 98 | 31 | 119 | 7.74e-16 | 80.1 |
| Msa1036780 | AT4G28520.2 | 32.400 | 250 | 110 | 6 | 121 | 362 | 189 | 387 | 5.54e-26 | 110 |
| Msa1036780 | AT4G28520.2 | 39.535 | 86 | 52 | 0 | 13 | 98 | 34 | 119 | 1.02e-15 | 79.3 |
| Msa1036780 | AT4G28520.4 | 32.400 | 250 | 110 | 6 | 121 | 362 | 189 | 387 | 6.68e-26 | 109 |
| Msa1036780 | AT4G28520.4 | 39.535 | 86 | 52 | 0 | 13 | 98 | 34 | 119 | 9.68e-16 | 79.3 |
Find 122 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAGGTAGTGGATATTT+TGG | 0.189498 | 7_1:-73218902 | Msa1036780:intron |
| GCATCTCATCAAGTTGATTT+TGG | 0.194708 | 7_1:+73218639 | None:intergenic |
| CTCTGAAGCGGTTAACCTTT+TGG | 0.227280 | 7_1:+73218762 | None:intergenic |
| ATCTTCTTCATCTTGTCTGC+TGG | 0.238556 | 7_1:+73218227 | None:intergenic |
| CATCTGAATTGTCTGTTGTT+TGG | 0.280692 | 7_1:+73219120 | None:intergenic |
| TGGCTTCAAGAGGGATTTCT+TGG | 0.297875 | 7_1:-73218385 | Msa1036780:CDS |
| GCTGCCATTGCTAGGCTTGC+AGG | 0.308997 | 7_1:-73217594 | Msa1036780:CDS |
| AAAGAGAGAGTCGCAGGTTC+AGG | 0.353682 | 7_1:-73218826 | Msa1036780:CDS |
| TCTGACTCTATACGGTTATC+AGG | 0.356503 | 7_1:+73219168 | None:intergenic |
| GGGGAGAACAAAGGAGAGGA+AGG | 0.357587 | 7_1:-73218443 | Msa1036780:CDS |
| TCTTCTTCATCTTGTCTGCT+GGG | 0.361536 | 7_1:+73218228 | None:intergenic |
| GCCGTTTCTCTTATTGATAC+TGG | 0.366921 | 7_1:-73218668 | Msa1036780:CDS |
| TGACAGAGATTCTATCTTGC+TGG | 0.375161 | 7_1:-73218516 | Msa1036780:intron |
| AAGATGCATTGAACGTGAAC+AGG | 0.383240 | 7_1:-73218362 | Msa1036780:CDS |
| GAAAATTTCTTGAGGAGCAT+TGG | 0.398726 | 7_1:+73219035 | None:intergenic |
| GGGTGGCGTTGTTGTCTCTC+TGG | 0.402254 | 7_1:+73218249 | None:intergenic |
| TGCCACCTTCTGACTCTATA+CGG | 0.408552 | 7_1:+73219160 | None:intergenic |
| CAGAAACAATTTGCACTGCC+AGG | 0.417327 | 7_1:-73218080 | Msa1036780:CDS |
| CAGGAACGAAGACGAGGAGA+AGG | 0.436632 | 7_1:-73218316 | Msa1036780:CDS |
| GCTTTGACCTCCCAGCTCTC+AGG | 0.439759 | 7_1:-73217981 | Msa1036780:CDS |
| TCCTCCTTCCACTTTGACAA+TGG | 0.447325 | 7_1:+73218290 | None:intergenic |
| AGTCTTAGCCACCTGAGAGC+TGG | 0.450799 | 7_1:+73217970 | None:intergenic |
| ATCAAAGTAACTGACCTTGT+TGG | 0.450830 | 7_1:+73219010 | None:intergenic |
| GTCTTAGCCACCTGAGAGCT+GGG | 0.457608 | 7_1:+73217971 | None:intergenic |
| ATAAGAGAAACGGCAATGAC+TGG | 0.458432 | 7_1:+73218677 | None:intergenic |
| GAAAAGCAGAAGAGGGGAAG+AGG | 0.459048 | 7_1:-73218160 | Msa1036780:CDS |
| AGCTCTACGTTCGGACTCAC+GGG | 0.466635 | 7_1:+73217455 | None:intergenic |
| AGCGTAATATTAGCATTGAA+TGG | 0.476842 | 7_1:-73217774 | Msa1036780:CDS |
| TTAAGCTGCAGCTCTACGTT+CGG | 0.478255 | 7_1:+73217446 | None:intergenic |
| TGTGGCTCCTCAAAGGTCTC+AGG | 0.481154 | 7_1:+73218860 | None:intergenic |
| ATGAAGATGAGACCATGTTC+TGG | 0.486320 | 7_1:+73218052 | None:intergenic |
| CTTCATCTTGTCTGCTGGGG+TGG | 0.487224 | 7_1:+73218232 | None:intergenic |
| CAACAACAAGTGAGAGGAAG+GGG | 0.490614 | 7_1:-73218462 | Msa1036780:CDS |
| GCCAGTATCAATAAGAGAAA+CGG | 0.493583 | 7_1:+73218667 | None:intergenic |
| ATGATAATGCTGCCATTGCT+AGG | 0.494110 | 7_1:-73217602 | Msa1036780:CDS |
| CTATACGGTTATCAGGTTCA+AGG | 0.495690 | 7_1:+73219175 | None:intergenic |
| GGGTTGTCCTGAGACCTTTG+AGG | 0.496834 | 7_1:-73218867 | Msa1036780:CDS |
| TTCGATGAGGAGCTAGAAGC+TGG | 0.507000 | 7_1:-73217708 | Msa1036780:CDS |
| GAAGAGCGCCCCTGCCGCCG+AGG | 0.510029 | 7_1:-73218138 | Msa1036780:CDS |
| AGATGAAGATGAAGATGAAG+AGG | 0.510375 | 7_1:-73218208 | Msa1036780:CDS |
| GAGAGCTGGGAGGTCAAAGC+TGG | 0.514503 | 7_1:+73217984 | None:intergenic |
| CAGCAAAATCAGTGAGCGAC+AGG | 0.515977 | 7_1:-73217650 | Msa1036780:CDS |
| AGATTCCTGTGGCTCCTCAA+AGG | 0.516882 | 7_1:+73218853 | None:intergenic |
| TGAGGAGCATTGGAGTAGAA+TGG | 0.517059 | 7_1:+73219045 | None:intergenic |
| AGCAATGGCAGCATTATCAT+TGG | 0.517614 | 7_1:+73217605 | None:intergenic |
| GACAGAGATTCTATCTTGCT+GGG | 0.518681 | 7_1:-73218515 | Msa1036780:intron |
| ATGAAGATGAAGAGGACGAG+TGG | 0.519387 | 7_1:-73218200 | Msa1036780:CDS |
| AAGAGAGAGTCGCAGGTTCA+GGG | 0.521011 | 7_1:-73218825 | Msa1036780:CDS |
| CTGCCATTGCTAGGCTTGCA+GGG | 0.521189 | 7_1:-73217593 | Msa1036780:CDS |
| AACAGACAATTCAGATGTGC+AGG | 0.521313 | 7_1:-73219114 | Msa1036780:CDS |
| TCAAAGGTCTCAGGACAACC+CGG | 0.526522 | 7_1:+73218869 | None:intergenic |
| GGCGTTGTTGTCTCTCTGGA+GGG | 0.532511 | 7_1:+73218253 | None:intergenic |
| CAGCTACATTCAACATGGAC+AGG | 0.533471 | 7_1:-73217530 | Msa1036780:CDS |
| ATGAAGAGGACGAGTGGAGG+CGG | 0.533847 | 7_1:-73218194 | Msa1036780:CDS |
| ATCAACTTGATGAGATGCCT+AGG | 0.535577 | 7_1:-73218634 | Msa1036780:CDS |
| AGCAACAACAAGTGAGAGGA+AGG | 0.535707 | 7_1:-73218464 | Msa1036780:CDS |
| GCTTGTGGGTTGTAGATGTC+AGG | 0.536179 | 7_1:+73218027 | None:intergenic |
| GACATCTACAACCCACAAGC+TGG | 0.543748 | 7_1:-73218024 | Msa1036780:CDS |
| CACTGGCATCCCACTTAGAG+TGG | 0.546537 | 7_1:+73217563 | None:intergenic |
| GTTCAGAGACAGTCACCAAA+AGG | 0.548058 | 7_1:-73218777 | Msa1036780:CDS |
| GAGCGACAGGTTCACTTATG+TGG | 0.548616 | 7_1:-73217637 | Msa1036780:CDS |
| AGGGAACAAGAAGAAAATGA+AGG | 0.549429 | 7_1:-73218423 | Msa1036780:CDS |
| TGGCGTTGTTGTCTCTCTGG+AGG | 0.551371 | 7_1:+73218252 | None:intergenic |
| GATCTCATTGCAGTTCCTAC+CGG | 0.553691 | 7_1:-73218734 | Msa1036780:CDS |
| TGAGACCTTTGAGGAGCCAC+AGG | 0.553953 | 7_1:-73218858 | Msa1036780:CDS |
| CTTCTTCATCTTGTCTGCTG+GGG | 0.554236 | 7_1:+73218229 | None:intergenic |
| GGGACACAATCCACTCTAAG+TGG | 0.554986 | 7_1:-73217573 | Msa1036780:CDS |
| GACCATGTTCTGGTGAAGCC+TGG | 0.558245 | 7_1:+73218062 | None:intergenic |
| ATCATCAGAAAAGCAGAAGA+GGG | 0.559051 | 7_1:-73218167 | Msa1036780:CDS |
| AAGGTGGCATTATTGAGACT+TGG | 0.560213 | 7_1:-73219146 | Msa1036780:CDS |
| CTGAACAAAGAGAGAGTCGC+AGG | 0.561151 | 7_1:-73218832 | Msa1036780:CDS |
| GAAGGGAGCCATTGTCAAAG+TGG | 0.561778 | 7_1:-73218298 | Msa1036780:CDS |
| CATCATCAGAAAAGCAGAAG+AGG | 0.567506 | 7_1:-73218168 | Msa1036780:CDS |
| TCTCTTTGTTCAGATTCCTG+TGG | 0.573636 | 7_1:+73218842 | None:intergenic |
| GGAAGGGGAGAACAAAGGAG+AGG | 0.578313 | 7_1:-73218447 | Msa1036780:CDS |
| AGGAACGAAGACGAGGAGAA+GGG | 0.580851 | 7_1:-73218315 | Msa1036780:CDS |
| GGGAGAACAAAGGAGAGGAA+GGG | 0.584205 | 7_1:-73218442 | Msa1036780:CDS |
| ATTCAACATGGACAGGAATG+AGG | 0.590592 | 7_1:-73217523 | Msa1036780:CDS |
| TGCCAGGCTTCACCAGAACA+TGG | 0.593210 | 7_1:-73218064 | Msa1036780:CDS |
| CTAAGACTCAGTGCTGAGCA+TGG | 0.593269 | 7_1:-73217955 | Msa1036780:CDS |
| AAGGTTAACCGCTTCAGAGA+GGG | 0.593895 | 7_1:-73218758 | Msa1036780:CDS |
| GGAGCCATTGTCAAAGTGGA+AGG | 0.595071 | 7_1:-73218294 | Msa1036780:CDS |
| TGAGATCACCCTCTCTGAAG+CGG | 0.596806 | 7_1:+73218750 | None:intergenic |
| TATACGGTTATCAGGTTCAA+GGG | 0.597531 | 7_1:+73219176 | None:intergenic |
| GTAGCTGCAAGCACATCCAC+TGG | 0.599451 | 7_1:+73217546 | None:intergenic |
| TGTTGGATGAAAATTTCTTG+AGG | 0.600246 | 7_1:+73219027 | None:intergenic |
| AGCTGACACTCATTTCGTTG+AGG | 0.603602 | 7_1:+73219213 | None:intergenic |
| TGAGAGGAAGGGGAGAACAA+AGG | 0.604422 | 7_1:-73218452 | Msa1036780:CDS |
| TTGACCTCCCAGCTCTCAGG+TGG | 0.604883 | 7_1:-73217978 | Msa1036780:CDS |
| TTGAAGAGTACAACGAGAGA+GGG | 0.608324 | 7_1:+73219086 | None:intergenic |
| AAGATGAAGAGGACGAGTGG+AGG | 0.609586 | 7_1:-73218197 | Msa1036780:CDS |
| GCAACAACAAGTGAGAGGAA+GGG | 0.610187 | 7_1:-73218463 | Msa1036780:CDS |
| GAACAAGAAGAAAATGAAGG+AGG | 0.622267 | 7_1:-73218420 | Msa1036780:CDS |
| AGGGAATCTGAACAAGGAGA+AGG | 0.623842 | 7_1:-73218806 | Msa1036780:CDS |
| GTACATCCAAAATACAGTAC+CGG | 0.624828 | 7_1:+73218715 | None:intergenic |
| TAGCATTGAATGGACGTGCA+AGG | 0.625592 | 7_1:-73217764 | Msa1036780:CDS |
| AGATGCATTGAACGTGAACA+GGG | 0.625997 | 7_1:-73218361 | Msa1036780:CDS |
| TCAACTTGATGAGATGCCTA+GGG | 0.627421 | 7_1:-73218633 | Msa1036780:intron |
| GCCATTGTCAAAGTGGAAGG+AGG | 0.628414 | 7_1:-73218291 | Msa1036780:CDS |
| CAAAGGTCTCAGGACAACCC+GGG | 0.629938 | 7_1:+73218870 | None:intergenic |
| TGTCCCTGCAAGCCTAGCAA+TGG | 0.632591 | 7_1:+73217590 | None:intergenic |
| CTACAAGTAGTGAACTGCAA+TGG | 0.634940 | 7_1:-73217741 | Msa1036780:CDS |
| CTACGTTCGGACTCACGGGG+TGG | 0.640813 | 7_1:+73217459 | None:intergenic |
| GTTGAAGAGTACAACGAGAG+AGG | 0.643187 | 7_1:+73219085 | None:intergenic |
| ACATGGACAGGAATGAGGCA+AGG | 0.649331 | 7_1:-73217518 | Msa1036780:CDS |
| GGACACAATCCACTCTAAGT+GGG | 0.651552 | 7_1:-73217572 | Msa1036780:CDS |
| TATCAGCAACAACAAGTGAG+AGG | 0.656929 | 7_1:-73218468 | Msa1036780:CDS |
| AGGTTCAGGGAATCTGAACA+AGG | 0.656969 | 7_1:-73218812 | Msa1036780:CDS |
| TCAAGGCAGGAACGAAGACG+AGG | 0.664269 | 7_1:-73218322 | Msa1036780:CDS |
| GCTTGCAGCTACATTCAACA+TGG | 0.668251 | 7_1:-73217535 | Msa1036780:CDS |
| TGGCAACACTGTGTTCGATG+AGG | 0.669328 | 7_1:-73217721 | Msa1036780:CDS |
| TGTGAAAGAGAAAGACGCAA+CGG | 0.673639 | 7_1:-73218108 | Msa1036780:CDS |
| TCATCAGAAAAGCAGAAGAG+GGG | 0.679443 | 7_1:-73218166 | Msa1036780:CDS |
| AACCGTATAGAGTCAGAAGG+TGG | 0.682330 | 7_1:-73219162 | Msa1036780:CDS |
| CTGAACAAGGAGAAGGACGT+AGG | 0.683262 | 7_1:-73218799 | Msa1036780:CDS |
| GATAACCGTATAGAGTCAGA+AGG | 0.693081 | 7_1:-73219165 | Msa1036780:CDS |
| AAAGGTTAACCGCTTCAGAG+AGG | 0.693271 | 7_1:-73218759 | Msa1036780:CDS |
| ATCCAAAATACAGTACCGGT+AGG | 0.700412 | 7_1:+73218719 | None:intergenic |
| TTTGCATTGAGATTGTAGTG+AGG | 0.715037 | 7_1:+73217798 | None:intergenic |
| GCTCTACGTTCGGACTCACG+GGG | 0.716198 | 7_1:+73217456 | None:intergenic |
| CATTGGAGTAGAATGGTCTG+CGG | 0.722604 | 7_1:+73219052 | None:intergenic |
| TTAGCCACCTGAGAGCTGGG+AGG | 0.734436 | 7_1:+73217974 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAGATAAAGTATTTGTT+TGG | - | chr7_1:73218136-73218155 | Msa1036780:CDS | 15.0% |
| !!! | TAAAAGATAAAGTATTTGTT+TGG | - | chr7_1:73218136-73218155 | Msa1036780:CDS | 15.0% |
| !! | AAAAGAAAAAACATACTCTA+TGG | + | chr7_1:73218769-73218788 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAACATACTCTA+TGG | + | chr7_1:73218769-73218788 | None:intergenic | 20.0% |
| ! | TGTAATGTAGGTAAAGATAT+TGG | + | chr7_1:73217714-73217733 | None:intergenic | 25.0% |
| ! | CTAATATATGCATGTAATGT+AGG | + | chr7_1:73217726-73217745 | None:intergenic | 25.0% |
| !!! | TTTTTTACTATACCCATTAC+AGG | - | chr7_1:73217775-73217794 | Msa1036780:CDS | 25.0% |
| ! | GATATAGTTGAAAAACTTCA+AGG | - | chr7_1:73218353-73218372 | Msa1036780:CDS | 25.0% |
| !! | TCTTTTAGCATCAACATTAT+AGG | - | chr7_1:73218819-73218838 | Msa1036780:CDS | 25.0% |
| ! | TGTAATGTAGGTAAAGATAT+TGG | + | chr7_1:73217714-73217733 | None:intergenic | 25.0% |
| ! | CTAATATATGCATGTAATGT+AGG | + | chr7_1:73217726-73217745 | None:intergenic | 25.0% |
| !!! | TTTTTTACTATACCCATTAC+AGG | - | chr7_1:73217775-73217794 | Msa1036780:CDS | 25.0% |
| ! | GATATAGTTGAAAAACTTCA+AGG | - | chr7_1:73218353-73218372 | Msa1036780:CDS | 25.0% |
| !! | TCTTTTAGCATCAACATTAT+AGG | - | chr7_1:73218819-73218838 | Msa1036780:CDS | 25.0% |
| TGTTGGATGAAAATTTCTTG+AGG | + | chr7_1:73217668-73217687 | None:intergenic | 30.0% | |
| ! | CAAGAAATTTTCATCCAACA+AGG | - | chr7_1:73217668-73217687 | Msa1036780:CDS | 30.0% |
| AAATATCCACTACCTGTAAT+GGG | + | chr7_1:73217790-73217809 | None:intergenic | 30.0% | |
| AAAATATCCACTACCTGTAA+TGG | + | chr7_1:73217791-73217810 | None:intergenic | 30.0% | |
| !!! | ATTACAGGTAGTGGATATTT+TGG | - | chr7_1:73217790-73217809 | Msa1036780:CDS | 30.0% |
| ATTGTAAAAACTCTTGCTCT+TGG | + | chr7_1:73218205-73218224 | None:intergenic | 30.0% | |
| ! | GTCTTTCTCTTTCACATTTT+TGG | + | chr7_1:73218580-73218599 | None:intergenic | 30.0% |
| AGATTGACATAAAACGAATC+TGG | + | chr7_1:73218802-73218821 | None:intergenic | 30.0% | |
| !! | AACATTATAGGAAGTGTTCA+AGG | - | chr7_1:73218831-73218850 | Msa1036780:CDS | 30.0% |
| ! | AGCGTAATATTAGCATTGAA+TGG | - | chr7_1:73218918-73218937 | Msa1036780:intron | 30.0% |
| TGTTGGATGAAAATTTCTTG+AGG | + | chr7_1:73217668-73217687 | None:intergenic | 30.0% | |
| ! | CAAGAAATTTTCATCCAACA+AGG | - | chr7_1:73217668-73217687 | Msa1036780:CDS | 30.0% |
| AAATATCCACTACCTGTAAT+GGG | + | chr7_1:73217790-73217809 | None:intergenic | 30.0% | |
| AAAATATCCACTACCTGTAA+TGG | + | chr7_1:73217791-73217810 | None:intergenic | 30.0% | |
| !!! | ATTACAGGTAGTGGATATTT+TGG | - | chr7_1:73217790-73217809 | Msa1036780:CDS | 30.0% |
| ATTGTAAAAACTCTTGCTCT+TGG | + | chr7_1:73218205-73218224 | None:intergenic | 30.0% | |
| ! | GTCTTTCTCTTTCACATTTT+TGG | + | chr7_1:73218580-73218599 | None:intergenic | 30.0% |
| AGATTGACATAAAACGAATC+TGG | + | chr7_1:73218802-73218821 | None:intergenic | 30.0% | |
| !! | AACATTATAGGAAGTGTTCA+AGG | - | chr7_1:73218831-73218850 | Msa1036780:CDS | 30.0% |
| ! | AGCGTAATATTAGCATTGAA+TGG | - | chr7_1:73218918-73218937 | Msa1036780:intron | 30.0% |
| TATACGGTTATCAGGTTCAA+GGG | + | chr7_1:73217519-73217538 | None:intergenic | 35.0% | |
| CATCTGAATTGTCTGTTGTT+TGG | + | chr7_1:73217575-73217594 | None:intergenic | 35.0% | |
| ! | GAAAATTTCTTGAGGAGCAT+TGG | + | chr7_1:73217660-73217679 | None:intergenic | 35.0% |
| ATCAAAGTAACTGACCTTGT+TGG | + | chr7_1:73217685-73217704 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGCATGGTATTCC+CGG | - | chr7_1:73217804-73217823 | Msa1036780:CDS | 35.0% |
| GTACATCCAAAATACAGTAC+CGG | + | chr7_1:73217980-73217999 | None:intergenic | 35.0% | |
| ! | ATTTTGGATGTACAATGACC+AGG | - | chr7_1:73217987-73218006 | Msa1036780:CDS | 35.0% |
| GCCAGTATCAATAAGAGAAA+CGG | + | chr7_1:73218028-73218047 | None:intergenic | 35.0% | |
| !!! | GCATCTCATCAAGTTGATTT+TGG | + | chr7_1:73218056-73218075 | None:intergenic | 35.0% |
| AGGGAACAAGAAGAAAATGA+AGG | - | chr7_1:73218269-73218288 | Msa1036780:CDS | 35.0% | |
| GAACAAGAAGAAAATGAAGG+AGG | - | chr7_1:73218272-73218291 | Msa1036780:CDS | 35.0% | |
| TAGTTGAAAAACTTCAAGGC+AGG | - | chr7_1:73218357-73218376 | Msa1036780:CDS | 35.0% | |
| AGATGAAGATGAAGATGAAG+AGG | - | chr7_1:73218484-73218503 | Msa1036780:CDS | 35.0% | |
| ATCATCAGAAAAGCAGAAGA+GGG | - | chr7_1:73218525-73218544 | Msa1036780:intron | 35.0% | |
| !! | TTTTGATTCTACCAGCTTGT+GGG | + | chr7_1:73218682-73218701 | None:intergenic | 35.0% |
| TTTGCATTGAGATTGTAGTG+AGG | + | chr7_1:73218897-73218916 | None:intergenic | 35.0% | |
| TATACGGTTATCAGGTTCAA+GGG | + | chr7_1:73217519-73217538 | None:intergenic | 35.0% | |
| CATCTGAATTGTCTGTTGTT+TGG | + | chr7_1:73217575-73217594 | None:intergenic | 35.0% | |
| ! | GAAAATTTCTTGAGGAGCAT+TGG | + | chr7_1:73217660-73217679 | None:intergenic | 35.0% |
| ATCAAAGTAACTGACCTTGT+TGG | + | chr7_1:73217685-73217704 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGCATGGTATTCC+CGG | - | chr7_1:73217804-73217823 | Msa1036780:CDS | 35.0% |
| GTACATCCAAAATACAGTAC+CGG | + | chr7_1:73217980-73217999 | None:intergenic | 35.0% | |
| ! | ATTTTGGATGTACAATGACC+AGG | - | chr7_1:73217987-73218006 | Msa1036780:CDS | 35.0% |
| GCCAGTATCAATAAGAGAAA+CGG | + | chr7_1:73218028-73218047 | None:intergenic | 35.0% | |
| !!! | GCATCTCATCAAGTTGATTT+TGG | + | chr7_1:73218056-73218075 | None:intergenic | 35.0% |
| AGGGAACAAGAAGAAAATGA+AGG | - | chr7_1:73218269-73218288 | Msa1036780:CDS | 35.0% | |
| GAACAAGAAGAAAATGAAGG+AGG | - | chr7_1:73218272-73218291 | Msa1036780:CDS | 35.0% | |
| TAGTTGAAAAACTTCAAGGC+AGG | - | chr7_1:73218357-73218376 | Msa1036780:CDS | 35.0% | |
| AGATGAAGATGAAGATGAAG+AGG | - | chr7_1:73218484-73218503 | Msa1036780:CDS | 35.0% | |
| ATCATCAGAAAAGCAGAAGA+GGG | - | chr7_1:73218525-73218544 | Msa1036780:intron | 35.0% | |
| !! | TTTTGATTCTACCAGCTTGT+GGG | + | chr7_1:73218682-73218701 | None:intergenic | 35.0% |
| TTTGCATTGAGATTGTAGTG+AGG | + | chr7_1:73218897-73218916 | None:intergenic | 35.0% | |
| CTATACGGTTATCAGGTTCA+AGG | + | chr7_1:73217520-73217539 | None:intergenic | 40.0% | |
| TCTGACTCTATACGGTTATC+AGG | + | chr7_1:73217527-73217546 | None:intergenic | 40.0% | |
| GATAACCGTATAGAGTCAGA+AGG | - | chr7_1:73217527-73217546 | Msa1036780:CDS | 40.0% | |
| AAGGTGGCATTATTGAGACT+TGG | - | chr7_1:73217546-73217565 | Msa1036780:CDS | 40.0% | |
| AACAGACAATTCAGATGTGC+AGG | - | chr7_1:73217578-73217597 | Msa1036780:CDS | 40.0% | |
| ! | TTGAAGAGTACAACGAGAGA+GGG | + | chr7_1:73217609-73217628 | None:intergenic | 40.0% |
| ACTATACCCATTACAGGTAG+TGG | - | chr7_1:73217781-73217800 | Msa1036780:CDS | 40.0% | |
| !!! | AGGTAGTGGATATTTTGGCA+TGG | - | chr7_1:73217795-73217814 | Msa1036780:CDS | 40.0% |
| !!! | TATTTTGGCATGGTATTCCC+GGG | - | chr7_1:73217805-73217824 | Msa1036780:CDS | 40.0% |
| TCTCTTTGTTCAGATTCCTG+TGG | + | chr7_1:73217853-73217872 | None:intergenic | 40.0% | |
| ! | TTCCTACCGGTACTGTATTT+TGG | - | chr7_1:73217971-73217990 | Msa1036780:CDS | 40.0% |
| !! | ATCCAAAATACAGTACCGGT+AGG | + | chr7_1:73217976-73217995 | None:intergenic | 40.0% |
| ATAAGAGAAACGGCAATGAC+TGG | + | chr7_1:73218018-73218037 | None:intergenic | 40.0% | |
| GCCGTTTCTCTTATTGATAC+TGG | - | chr7_1:73218024-73218043 | Msa1036780:CDS | 40.0% | |
| ATCAACTTGATGAGATGCCT+AGG | - | chr7_1:73218058-73218077 | Msa1036780:CDS | 40.0% | |
| TCAACTTGATGAGATGCCTA+GGG | - | chr7_1:73218059-73218078 | Msa1036780:CDS | 40.0% | |
| TGACAGAGATTCTATCTTGC+TGG | - | chr7_1:73218176-73218195 | Msa1036780:CDS | 40.0% | |
| GACAGAGATTCTATCTTGCT+GGG | - | chr7_1:73218177-73218196 | Msa1036780:CDS | 40.0% | |
| TATCAGCAACAACAAGTGAG+AGG | - | chr7_1:73218224-73218243 | Msa1036780:CDS | 40.0% | |
| ! | ACATTTTCAGTGGCTTCAAG+AGG | - | chr7_1:73218297-73218316 | Msa1036780:CDS | 40.0% |
| ! | CATTTTCAGTGGCTTCAAGA+GGG | - | chr7_1:73218298-73218317 | Msa1036780:CDS | 40.0% |
| AAGATGCATTGAACGTGAAC+AGG | - | chr7_1:73218330-73218349 | Msa1036780:CDS | 40.0% | |
| AGATGCATTGAACGTGAACA+GGG | - | chr7_1:73218331-73218350 | Msa1036780:CDS | 40.0% | |
| TCTTCTTCATCTTGTCTGCT+GGG | + | chr7_1:73218467-73218486 | None:intergenic | 40.0% | |
| ATCTTCTTCATCTTGTCTGC+TGG | + | chr7_1:73218468-73218487 | None:intergenic | 40.0% | |
| !! | CTTCTGCTTTTCTGATGATG+TGG | + | chr7_1:73218524-73218543 | None:intergenic | 40.0% |
| CATCATCAGAAAAGCAGAAG+AGG | - | chr7_1:73218524-73218543 | Msa1036780:intron | 40.0% | |
| TCATCAGAAAAGCAGAAGAG+GGG | - | chr7_1:73218526-73218545 | Msa1036780:intron | 40.0% | |
| !!! | CTCTTTCACATTTTTGGCCT+CGG | + | chr7_1:73218574-73218593 | None:intergenic | 40.0% |
| TGTGAAAGAGAAAGACGCAA+CGG | - | chr7_1:73218584-73218603 | Msa1036780:intron | 40.0% | |
| ATGAAGATGAGACCATGTTC+TGG | + | chr7_1:73218643-73218662 | None:intergenic | 40.0% | |
| !!! | GTTTTGATTCTACCAGCTTG+TGG | + | chr7_1:73218683-73218702 | None:intergenic | 40.0% |
| CTACAAGTAGTGAACTGCAA+TGG | - | chr7_1:73218951-73218970 | Msa1036780:intron | 40.0% | |
| AGCAATGGCAGCATTATCAT+TGG | + | chr7_1:73219090-73219109 | None:intergenic | 40.0% | |
| ! | ATGATAATGCTGCCATTGCT+AGG | - | chr7_1:73219090-73219109 | Msa1036780:CDS | 40.0% |
| ATTCAACATGGACAGGAATG+AGG | - | chr7_1:73219169-73219188 | Msa1036780:CDS | 40.0% | |
| CTATACGGTTATCAGGTTCA+AGG | + | chr7_1:73217520-73217539 | None:intergenic | 40.0% | |
| TCTGACTCTATACGGTTATC+AGG | + | chr7_1:73217527-73217546 | None:intergenic | 40.0% | |
| GATAACCGTATAGAGTCAGA+AGG | - | chr7_1:73217527-73217546 | Msa1036780:CDS | 40.0% | |
| AAGGTGGCATTATTGAGACT+TGG | - | chr7_1:73217546-73217565 | Msa1036780:CDS | 40.0% | |
| AACAGACAATTCAGATGTGC+AGG | - | chr7_1:73217578-73217597 | Msa1036780:CDS | 40.0% | |
| ! | TTGAAGAGTACAACGAGAGA+GGG | + | chr7_1:73217609-73217628 | None:intergenic | 40.0% |
| ACTATACCCATTACAGGTAG+TGG | - | chr7_1:73217781-73217800 | Msa1036780:CDS | 40.0% | |
| !!! | AGGTAGTGGATATTTTGGCA+TGG | - | chr7_1:73217795-73217814 | Msa1036780:CDS | 40.0% |
| !!! | TATTTTGGCATGGTATTCCC+GGG | - | chr7_1:73217805-73217824 | Msa1036780:CDS | 40.0% |
| TCTCTTTGTTCAGATTCCTG+TGG | + | chr7_1:73217853-73217872 | None:intergenic | 40.0% | |
| ! | TTCCTACCGGTACTGTATTT+TGG | - | chr7_1:73217971-73217990 | Msa1036780:CDS | 40.0% |
| !! | ATCCAAAATACAGTACCGGT+AGG | + | chr7_1:73217976-73217995 | None:intergenic | 40.0% |
| ATAAGAGAAACGGCAATGAC+TGG | + | chr7_1:73218018-73218037 | None:intergenic | 40.0% | |
| GCCGTTTCTCTTATTGATAC+TGG | - | chr7_1:73218024-73218043 | Msa1036780:CDS | 40.0% | |
| ATCAACTTGATGAGATGCCT+AGG | - | chr7_1:73218058-73218077 | Msa1036780:CDS | 40.0% | |
| TCAACTTGATGAGATGCCTA+GGG | - | chr7_1:73218059-73218078 | Msa1036780:CDS | 40.0% | |
| TGACAGAGATTCTATCTTGC+TGG | - | chr7_1:73218176-73218195 | Msa1036780:CDS | 40.0% | |
| GACAGAGATTCTATCTTGCT+GGG | - | chr7_1:73218177-73218196 | Msa1036780:CDS | 40.0% | |
| TATCAGCAACAACAAGTGAG+AGG | - | chr7_1:73218224-73218243 | Msa1036780:CDS | 40.0% | |
| ! | ACATTTTCAGTGGCTTCAAG+AGG | - | chr7_1:73218297-73218316 | Msa1036780:CDS | 40.0% |
| ! | CATTTTCAGTGGCTTCAAGA+GGG | - | chr7_1:73218298-73218317 | Msa1036780:CDS | 40.0% |
| AAGATGCATTGAACGTGAAC+AGG | - | chr7_1:73218330-73218349 | Msa1036780:CDS | 40.0% | |
| AGATGCATTGAACGTGAACA+GGG | - | chr7_1:73218331-73218350 | Msa1036780:CDS | 40.0% | |
| TCTTCTTCATCTTGTCTGCT+GGG | + | chr7_1:73218467-73218486 | None:intergenic | 40.0% | |
| ATCTTCTTCATCTTGTCTGC+TGG | + | chr7_1:73218468-73218487 | None:intergenic | 40.0% | |
| !! | CTTCTGCTTTTCTGATGATG+TGG | + | chr7_1:73218524-73218543 | None:intergenic | 40.0% |
| CATCATCAGAAAAGCAGAAG+AGG | - | chr7_1:73218524-73218543 | Msa1036780:intron | 40.0% | |
| TCATCAGAAAAGCAGAAGAG+GGG | - | chr7_1:73218526-73218545 | Msa1036780:intron | 40.0% | |
| !!! | CTCTTTCACATTTTTGGCCT+CGG | + | chr7_1:73218574-73218593 | None:intergenic | 40.0% |
| TGTGAAAGAGAAAGACGCAA+CGG | - | chr7_1:73218584-73218603 | Msa1036780:intron | 40.0% | |
| ATGAAGATGAGACCATGTTC+TGG | + | chr7_1:73218643-73218662 | None:intergenic | 40.0% | |
| !!! | GTTTTGATTCTACCAGCTTG+TGG | + | chr7_1:73218683-73218702 | None:intergenic | 40.0% |
| CTACAAGTAGTGAACTGCAA+TGG | - | chr7_1:73218951-73218970 | Msa1036780:intron | 40.0% | |
| AGCAATGGCAGCATTATCAT+TGG | + | chr7_1:73219090-73219109 | None:intergenic | 40.0% | |
| ! | ATGATAATGCTGCCATTGCT+AGG | - | chr7_1:73219090-73219109 | Msa1036780:CDS | 40.0% |
| ATTCAACATGGACAGGAATG+AGG | - | chr7_1:73219169-73219188 | Msa1036780:CDS | 40.0% | |
| AGCTGACACTCATTTCGTTG+AGG | + | chr7_1:73217482-73217501 | None:intergenic | 45.0% | |
| AACCGTATAGAGTCAGAAGG+TGG | - | chr7_1:73217530-73217549 | Msa1036780:CDS | 45.0% | |
| TGCCACCTTCTGACTCTATA+CGG | + | chr7_1:73217535-73217554 | None:intergenic | 45.0% | |
| ! | GTTGAAGAGTACAACGAGAG+AGG | + | chr7_1:73217610-73217629 | None:intergenic | 45.0% |
| CATTGGAGTAGAATGGTCTG+CGG | + | chr7_1:73217643-73217662 | None:intergenic | 45.0% | |
| !! | TGAGGAGCATTGGAGTAGAA+TGG | + | chr7_1:73217650-73217669 | None:intergenic | 45.0% |
| AGGTTCAGGGAATCTGAACA+AGG | - | chr7_1:73217880-73217899 | Msa1036780:intron | 45.0% | |
| AGGGAATCTGAACAAGGAGA+AGG | - | chr7_1:73217886-73217905 | Msa1036780:intron | 45.0% | |
| GTTCAGAGACAGTCACCAAA+AGG | - | chr7_1:73217915-73217934 | Msa1036780:intron | 45.0% | |
| !!! | CTCTGAAGCGGTTAACCTTT+TGG | + | chr7_1:73217933-73217952 | None:intergenic | 45.0% |
| AAAGGTTAACCGCTTCAGAG+AGG | - | chr7_1:73217933-73217952 | Msa1036780:intron | 45.0% | |
| AAGGTTAACCGCTTCAGAGA+GGG | - | chr7_1:73217934-73217953 | Msa1036780:intron | 45.0% | |
| GATCTCATTGCAGTTCCTAC+CGG | - | chr7_1:73217958-73217977 | Msa1036780:CDS | 45.0% | |
| AGCAACAACAAGTGAGAGGA+AGG | - | chr7_1:73218228-73218247 | Msa1036780:CDS | 45.0% | |
| GCAACAACAAGTGAGAGGAA+GGG | - | chr7_1:73218229-73218248 | Msa1036780:CDS | 45.0% | |
| CAACAACAAGTGAGAGGAAG+GGG | - | chr7_1:73218230-73218249 | Msa1036780:CDS | 45.0% | |
| ! | GAAGGAGGCAACATTTTCAG+TGG | - | chr7_1:73218287-73218306 | Msa1036780:CDS | 45.0% |
| TGGCTTCAAGAGGGATTTCT+TGG | - | chr7_1:73218307-73218326 | Msa1036780:CDS | 45.0% | |
| TCCTCCTTCCACTTTGACAA+TGG | + | chr7_1:73218405-73218424 | None:intergenic | 45.0% | |
| CTTCTTCATCTTGTCTGCTG+GGG | + | chr7_1:73218466-73218485 | None:intergenic | 45.0% | |
| ATGAAGATGAAGAGGACGAG+TGG | - | chr7_1:73218492-73218511 | Msa1036780:CDS | 45.0% | |
| !!! | TTTCACATTTTTGGCCTCGG+CGG | + | chr7_1:73218571-73218590 | None:intergenic | 45.0% |
| CAGAAACAATTTGCACTGCC+AGG | - | chr7_1:73218612-73218631 | Msa1036780:intron | 45.0% | |
| ! | TAGCATTGAATGGACGTGCA+AGG | - | chr7_1:73218928-73218947 | Msa1036780:intron | 45.0% |
| ! | GCTGCAACAGCAAAGTTTTG+TGG | + | chr7_1:73219026-73219045 | None:intergenic | 45.0% |
| GGACACAATCCACTCTAAGT+GGG | - | chr7_1:73219120-73219139 | Msa1036780:CDS | 45.0% | |
| GCTTGCAGCTACATTCAACA+TGG | - | chr7_1:73219157-73219176 | Msa1036780:CDS | 45.0% | |
| CAGCTACATTCAACATGGAC+AGG | - | chr7_1:73219162-73219181 | Msa1036780:CDS | 45.0% | |
| AGCTGACACTCATTTCGTTG+AGG | + | chr7_1:73217482-73217501 | None:intergenic | 45.0% | |
| AACCGTATAGAGTCAGAAGG+TGG | - | chr7_1:73217530-73217549 | Msa1036780:CDS | 45.0% | |
| TGCCACCTTCTGACTCTATA+CGG | + | chr7_1:73217535-73217554 | None:intergenic | 45.0% | |
| ! | GTTGAAGAGTACAACGAGAG+AGG | + | chr7_1:73217610-73217629 | None:intergenic | 45.0% |
| CATTGGAGTAGAATGGTCTG+CGG | + | chr7_1:73217643-73217662 | None:intergenic | 45.0% | |
| !! | TGAGGAGCATTGGAGTAGAA+TGG | + | chr7_1:73217650-73217669 | None:intergenic | 45.0% |
| AGGTTCAGGGAATCTGAACA+AGG | - | chr7_1:73217880-73217899 | Msa1036780:intron | 45.0% | |
| AGGGAATCTGAACAAGGAGA+AGG | - | chr7_1:73217886-73217905 | Msa1036780:intron | 45.0% | |
| GTTCAGAGACAGTCACCAAA+AGG | - | chr7_1:73217915-73217934 | Msa1036780:intron | 45.0% | |
| !!! | CTCTGAAGCGGTTAACCTTT+TGG | + | chr7_1:73217933-73217952 | None:intergenic | 45.0% |
| AAAGGTTAACCGCTTCAGAG+AGG | - | chr7_1:73217933-73217952 | Msa1036780:intron | 45.0% | |
| AAGGTTAACCGCTTCAGAGA+GGG | - | chr7_1:73217934-73217953 | Msa1036780:intron | 45.0% | |
| GATCTCATTGCAGTTCCTAC+CGG | - | chr7_1:73217958-73217977 | Msa1036780:CDS | 45.0% | |
| AGCAACAACAAGTGAGAGGA+AGG | - | chr7_1:73218228-73218247 | Msa1036780:CDS | 45.0% | |
| GCAACAACAAGTGAGAGGAA+GGG | - | chr7_1:73218229-73218248 | Msa1036780:CDS | 45.0% | |
| CAACAACAAGTGAGAGGAAG+GGG | - | chr7_1:73218230-73218249 | Msa1036780:CDS | 45.0% | |
| ! | GAAGGAGGCAACATTTTCAG+TGG | - | chr7_1:73218287-73218306 | Msa1036780:CDS | 45.0% |
| TGGCTTCAAGAGGGATTTCT+TGG | - | chr7_1:73218307-73218326 | Msa1036780:CDS | 45.0% | |
| TCCTCCTTCCACTTTGACAA+TGG | + | chr7_1:73218405-73218424 | None:intergenic | 45.0% | |
| CTTCTTCATCTTGTCTGCTG+GGG | + | chr7_1:73218466-73218485 | None:intergenic | 45.0% | |
| ATGAAGATGAAGAGGACGAG+TGG | - | chr7_1:73218492-73218511 | Msa1036780:CDS | 45.0% | |
| !!! | TTTCACATTTTTGGCCTCGG+CGG | + | chr7_1:73218571-73218590 | None:intergenic | 45.0% |
| CAGAAACAATTTGCACTGCC+AGG | - | chr7_1:73218612-73218631 | Msa1036780:intron | 45.0% | |
| ! | TAGCATTGAATGGACGTGCA+AGG | - | chr7_1:73218928-73218947 | Msa1036780:intron | 45.0% |
| ! | GCTGCAACAGCAAAGTTTTG+TGG | + | chr7_1:73219026-73219045 | None:intergenic | 45.0% |
| GGACACAATCCACTCTAAGT+GGG | - | chr7_1:73219120-73219139 | Msa1036780:CDS | 45.0% | |
| GCTTGCAGCTACATTCAACA+TGG | - | chr7_1:73219157-73219176 | Msa1036780:CDS | 45.0% | |
| CAGCTACATTCAACATGGAC+AGG | - | chr7_1:73219162-73219181 | Msa1036780:CDS | 45.0% | |
| TCAAAGGTCTCAGGACAACC+CGG | + | chr7_1:73217826-73217845 | None:intergenic | 50.0% | |
| AGATTCCTGTGGCTCCTCAA+AGG | + | chr7_1:73217842-73217861 | None:intergenic | 50.0% | |
| CTGAACAAAGAGAGAGTCGC+AGG | - | chr7_1:73217860-73217879 | Msa1036780:intron | 50.0% | |
| AAAGAGAGAGTCGCAGGTTC+AGG | - | chr7_1:73217866-73217885 | Msa1036780:intron | 50.0% | |
| AAGAGAGAGTCGCAGGTTCA+GGG | - | chr7_1:73217867-73217886 | Msa1036780:intron | 50.0% | |
| CTGAACAAGGAGAAGGACGT+AGG | - | chr7_1:73217893-73217912 | Msa1036780:intron | 50.0% | |
| ! | TGAGATCACCCTCTCTGAAG+CGG | + | chr7_1:73217945-73217964 | None:intergenic | 50.0% |
| TTATGCTCAGTGCTCACCCT+AGG | + | chr7_1:73218078-73218097 | None:intergenic | 50.0% | |
| TGAGAGGAAGGGGAGAACAA+AGG | - | chr7_1:73218240-73218259 | Msa1036780:CDS | 50.0% | |
| GGGAGAACAAAGGAGAGGAA+GGG | - | chr7_1:73218250-73218269 | Msa1036780:CDS | 50.0% | |
| AGGAACGAAGACGAGGAGAA+GGG | - | chr7_1:73218377-73218396 | Msa1036780:CDS | 50.0% | |
| GAAGGGAGCCATTGTCAAAG+TGG | - | chr7_1:73218394-73218413 | Msa1036780:CDS | 50.0% | |
| GGAGCCATTGTCAAAGTGGA+AGG | - | chr7_1:73218398-73218417 | Msa1036780:CDS | 50.0% | |
| GCCATTGTCAAAGTGGAAGG+AGG | - | chr7_1:73218401-73218420 | Msa1036780:CDS | 50.0% | |
| AAGATGAAGAGGACGAGTGG+AGG | - | chr7_1:73218495-73218514 | Msa1036780:CDS | 50.0% | |
| GAAAAGCAGAAGAGGGGAAG+AGG | - | chr7_1:73218532-73218551 | Msa1036780:intron | 50.0% | |
| ! | GCTTGTGGGTTGTAGATGTC+AGG | + | chr7_1:73218668-73218687 | None:intergenic | 50.0% |
| GACATCTACAACCCACAAGC+TGG | - | chr7_1:73218668-73218687 | Msa1036780:CDS | 50.0% | |
| ! | CTAAGACTCAGTGCTGAGCA+TGG | - | chr7_1:73218737-73218756 | Msa1036780:CDS | 50.0% |
| TGGCAACACTGTGTTCGATG+AGG | - | chr7_1:73218971-73218990 | Msa1036780:intron | 50.0% | |
| TTCGATGAGGAGCTAGAAGC+TGG | - | chr7_1:73218984-73219003 | Msa1036780:intron | 50.0% | |
| CAGCAAAATCAGTGAGCGAC+AGG | - | chr7_1:73219042-73219061 | Msa1036780:CDS | 50.0% | |
| GAGCGACAGGTTCACTTATG+TGG | - | chr7_1:73219055-73219074 | Msa1036780:CDS | 50.0% | |
| GGGACACAATCCACTCTAAG+TGG | - | chr7_1:73219119-73219138 | Msa1036780:CDS | 50.0% | |
| ACATGGACAGGAATGAGGCA+AGG | - | chr7_1:73219174-73219193 | Msa1036780:CDS | 50.0% | |
| TCAAAGGTCTCAGGACAACC+CGG | + | chr7_1:73217826-73217845 | None:intergenic | 50.0% | |
| AGATTCCTGTGGCTCCTCAA+AGG | + | chr7_1:73217842-73217861 | None:intergenic | 50.0% | |
| CTGAACAAAGAGAGAGTCGC+AGG | - | chr7_1:73217860-73217879 | Msa1036780:intron | 50.0% | |
| AAAGAGAGAGTCGCAGGTTC+AGG | - | chr7_1:73217866-73217885 | Msa1036780:intron | 50.0% | |
| AAGAGAGAGTCGCAGGTTCA+GGG | - | chr7_1:73217867-73217886 | Msa1036780:intron | 50.0% | |
| CTGAACAAGGAGAAGGACGT+AGG | - | chr7_1:73217893-73217912 | Msa1036780:intron | 50.0% | |
| ! | TGAGATCACCCTCTCTGAAG+CGG | + | chr7_1:73217945-73217964 | None:intergenic | 50.0% |
| TTATGCTCAGTGCTCACCCT+AGG | + | chr7_1:73218078-73218097 | None:intergenic | 50.0% | |
| TGAGAGGAAGGGGAGAACAA+AGG | - | chr7_1:73218240-73218259 | Msa1036780:CDS | 50.0% | |
| GGGAGAACAAAGGAGAGGAA+GGG | - | chr7_1:73218250-73218269 | Msa1036780:CDS | 50.0% | |
| AGGAACGAAGACGAGGAGAA+GGG | - | chr7_1:73218377-73218396 | Msa1036780:CDS | 50.0% | |
| GAAGGGAGCCATTGTCAAAG+TGG | - | chr7_1:73218394-73218413 | Msa1036780:CDS | 50.0% | |
| GGAGCCATTGTCAAAGTGGA+AGG | - | chr7_1:73218398-73218417 | Msa1036780:CDS | 50.0% | |
| GCCATTGTCAAAGTGGAAGG+AGG | - | chr7_1:73218401-73218420 | Msa1036780:CDS | 50.0% | |
| AAGATGAAGAGGACGAGTGG+AGG | - | chr7_1:73218495-73218514 | Msa1036780:CDS | 50.0% | |
| GAAAAGCAGAAGAGGGGAAG+AGG | - | chr7_1:73218532-73218551 | Msa1036780:intron | 50.0% | |
| ! | GCTTGTGGGTTGTAGATGTC+AGG | + | chr7_1:73218668-73218687 | None:intergenic | 50.0% |
| GACATCTACAACCCACAAGC+TGG | - | chr7_1:73218668-73218687 | Msa1036780:CDS | 50.0% | |
| ! | CTAAGACTCAGTGCTGAGCA+TGG | - | chr7_1:73218737-73218756 | Msa1036780:CDS | 50.0% |
| TGGCAACACTGTGTTCGATG+AGG | - | chr7_1:73218971-73218990 | Msa1036780:intron | 50.0% | |
| TTCGATGAGGAGCTAGAAGC+TGG | - | chr7_1:73218984-73219003 | Msa1036780:intron | 50.0% | |
| CAGCAAAATCAGTGAGCGAC+AGG | - | chr7_1:73219042-73219061 | Msa1036780:CDS | 50.0% | |
| GAGCGACAGGTTCACTTATG+TGG | - | chr7_1:73219055-73219074 | Msa1036780:CDS | 50.0% | |
| GGGACACAATCCACTCTAAG+TGG | - | chr7_1:73219119-73219138 | Msa1036780:CDS | 50.0% | |
| ACATGGACAGGAATGAGGCA+AGG | - | chr7_1:73219174-73219193 | Msa1036780:CDS | 50.0% | |
| !!! | GGCTGCTGCTGCTTTTGATG+AGG | + | chr7_1:73217461-73217480 | None:intergenic | 55.0% |
| CAAAGGTCTCAGGACAACCC+GGG | + | chr7_1:73217825-73217844 | None:intergenic | 55.0% | |
| GGGTTGTCCTGAGACCTTTG+AGG | - | chr7_1:73217825-73217844 | Msa1036780:intron | 55.0% | |
| TGTGGCTCCTCAAAGGTCTC+AGG | + | chr7_1:73217835-73217854 | None:intergenic | 55.0% | |
| ! | TGAGACCTTTGAGGAGCCAC+AGG | - | chr7_1:73217834-73217853 | Msa1036780:intron | 55.0% |
| GGAAGGGGAGAACAAAGGAG+AGG | - | chr7_1:73218245-73218264 | Msa1036780:CDS | 55.0% | |
| GGGGAGAACAAAGGAGAGGA+AGG | - | chr7_1:73218249-73218268 | Msa1036780:CDS | 55.0% | |
| TCAAGGCAGGAACGAAGACG+AGG | - | chr7_1:73218370-73218389 | Msa1036780:CDS | 55.0% | |
| CAGGAACGAAGACGAGGAGA+AGG | - | chr7_1:73218376-73218395 | Msa1036780:CDS | 55.0% | |
| GGCGTTGTTGTCTCTCTGGA+GGG | + | chr7_1:73218442-73218461 | None:intergenic | 55.0% | |
| TGGCGTTGTTGTCTCTCTGG+AGG | + | chr7_1:73218443-73218462 | None:intergenic | 55.0% | |
| CTTCATCTTGTCTGCTGGGG+TGG | + | chr7_1:73218463-73218482 | None:intergenic | 55.0% | |
| ATGAAGAGGACGAGTGGAGG+CGG | - | chr7_1:73218498-73218517 | Msa1036780:CDS | 55.0% | |
| TGCCAGGCTTCACCAGAACA+TGG | - | chr7_1:73218628-73218647 | Msa1036780:intron | 55.0% | |
| GACCATGTTCTGGTGAAGCC+TGG | + | chr7_1:73218633-73218652 | None:intergenic | 55.0% | |
| GTCTTAGCCACCTGAGAGCT+GGG | + | chr7_1:73218724-73218743 | None:intergenic | 55.0% | |
| AGTCTTAGCCACCTGAGAGC+TGG | + | chr7_1:73218725-73218744 | None:intergenic | 55.0% | |
| CTGCCATTGCTAGGCTTGCA+GGG | - | chr7_1:73219099-73219118 | Msa1036780:CDS | 55.0% | |
| TGTCCCTGCAAGCCTAGCAA+TGG | + | chr7_1:73219105-73219124 | None:intergenic | 55.0% | |
| CACTGGCATCCCACTTAGAG+TGG | + | chr7_1:73219132-73219151 | None:intergenic | 55.0% | |
| CACTCTAAGTGGGATGCCAG+TGG | - | chr7_1:73219130-73219149 | Msa1036780:CDS | 55.0% | |
| GTAGCTGCAAGCACATCCAC+TGG | + | chr7_1:73219149-73219168 | None:intergenic | 55.0% | |
| AGCTCTACGTTCGGACTCAC+GGG | + | chr7_1:73219240-73219259 | None:intergenic | 55.0% | |
| CAGCTCTACGTTCGGACTCA+CGG | + | chr7_1:73219241-73219260 | None:intergenic | 55.0% | |
| !!! | GGCTGCTGCTGCTTTTGATG+AGG | + | chr7_1:73217461-73217480 | None:intergenic | 55.0% |
| CAAAGGTCTCAGGACAACCC+GGG | + | chr7_1:73217825-73217844 | None:intergenic | 55.0% | |
| GGGTTGTCCTGAGACCTTTG+AGG | - | chr7_1:73217825-73217844 | Msa1036780:intron | 55.0% | |
| TGTGGCTCCTCAAAGGTCTC+AGG | + | chr7_1:73217835-73217854 | None:intergenic | 55.0% | |
| ! | TGAGACCTTTGAGGAGCCAC+AGG | - | chr7_1:73217834-73217853 | Msa1036780:intron | 55.0% |
| GGAAGGGGAGAACAAAGGAG+AGG | - | chr7_1:73218245-73218264 | Msa1036780:CDS | 55.0% | |
| GGGGAGAACAAAGGAGAGGA+AGG | - | chr7_1:73218249-73218268 | Msa1036780:CDS | 55.0% | |
| TCAAGGCAGGAACGAAGACG+AGG | - | chr7_1:73218370-73218389 | Msa1036780:CDS | 55.0% | |
| CAGGAACGAAGACGAGGAGA+AGG | - | chr7_1:73218376-73218395 | Msa1036780:CDS | 55.0% | |
| GGCGTTGTTGTCTCTCTGGA+GGG | + | chr7_1:73218442-73218461 | None:intergenic | 55.0% | |
| TGGCGTTGTTGTCTCTCTGG+AGG | + | chr7_1:73218443-73218462 | None:intergenic | 55.0% | |
| CTTCATCTTGTCTGCTGGGG+TGG | + | chr7_1:73218463-73218482 | None:intergenic | 55.0% | |
| ATGAAGAGGACGAGTGGAGG+CGG | - | chr7_1:73218498-73218517 | Msa1036780:CDS | 55.0% | |
| TGCCAGGCTTCACCAGAACA+TGG | - | chr7_1:73218628-73218647 | Msa1036780:intron | 55.0% | |
| GACCATGTTCTGGTGAAGCC+TGG | + | chr7_1:73218633-73218652 | None:intergenic | 55.0% | |
| GTCTTAGCCACCTGAGAGCT+GGG | + | chr7_1:73218724-73218743 | None:intergenic | 55.0% | |
| AGTCTTAGCCACCTGAGAGC+TGG | + | chr7_1:73218725-73218744 | None:intergenic | 55.0% | |
| CTGCCATTGCTAGGCTTGCA+GGG | - | chr7_1:73219099-73219118 | Msa1036780:CDS | 55.0% | |
| TGTCCCTGCAAGCCTAGCAA+TGG | + | chr7_1:73219105-73219124 | None:intergenic | 55.0% | |
| CACTGGCATCCCACTTAGAG+TGG | + | chr7_1:73219132-73219151 | None:intergenic | 55.0% | |
| CACTCTAAGTGGGATGCCAG+TGG | - | chr7_1:73219130-73219149 | Msa1036780:CDS | 55.0% | |
| GTAGCTGCAAGCACATCCAC+TGG | + | chr7_1:73219149-73219168 | None:intergenic | 55.0% | |
| AGCTCTACGTTCGGACTCAC+GGG | + | chr7_1:73219240-73219259 | None:intergenic | 55.0% | |
| CAGCTCTACGTTCGGACTCA+CGG | + | chr7_1:73219241-73219260 | None:intergenic | 55.0% | |
| ! | CGGCAATGACTGGAGTGTCC+TGG | + | chr7_1:73218008-73218027 | None:intergenic | 60.0% |
| GGGTGGCGTTGTTGTCTCTC+TGG | + | chr7_1:73218446-73218465 | None:intergenic | 60.0% | |
| !!! | ATTTTTGGCCTCGGCGGCAG+GGG | + | chr7_1:73218565-73218584 | None:intergenic | 60.0% |
| !!! | CATTTTTGGCCTCGGCGGCA+GGG | + | chr7_1:73218566-73218585 | None:intergenic | 60.0% |
| !!! | ACATTTTTGGCCTCGGCGGC+AGG | + | chr7_1:73218567-73218586 | None:intergenic | 60.0% |
| GAGAGCTGGGAGGTCAAAGC+TGG | + | chr7_1:73218711-73218730 | None:intergenic | 60.0% | |
| GCTTTGACCTCCCAGCTCTC+AGG | - | chr7_1:73218711-73218730 | Msa1036780:intron | 60.0% | |
| TTGACCTCCCAGCTCTCAGG+TGG | - | chr7_1:73218714-73218733 | Msa1036780:intron | 60.0% | |
| TTAGCCACCTGAGAGCTGGG+AGG | + | chr7_1:73218721-73218740 | None:intergenic | 60.0% | |
| GCTGCCATTGCTAGGCTTGC+AGG | - | chr7_1:73219098-73219117 | Msa1036780:CDS | 60.0% | |
| GCTCTACGTTCGGACTCACG+GGG | + | chr7_1:73219239-73219258 | None:intergenic | 60.0% | |
| ! | CGGCAATGACTGGAGTGTCC+TGG | + | chr7_1:73218008-73218027 | None:intergenic | 60.0% |
| GGGTGGCGTTGTTGTCTCTC+TGG | + | chr7_1:73218446-73218465 | None:intergenic | 60.0% | |
| !!! | ATTTTTGGCCTCGGCGGCAG+GGG | + | chr7_1:73218565-73218584 | None:intergenic | 60.0% |
| !!! | CATTTTTGGCCTCGGCGGCA+GGG | + | chr7_1:73218566-73218585 | None:intergenic | 60.0% |
| !!! | ACATTTTTGGCCTCGGCGGC+AGG | + | chr7_1:73218567-73218586 | None:intergenic | 60.0% |
| GAGAGCTGGGAGGTCAAAGC+TGG | + | chr7_1:73218711-73218730 | None:intergenic | 60.0% | |
| GCTTTGACCTCCCAGCTCTC+AGG | - | chr7_1:73218711-73218730 | Msa1036780:intron | 60.0% | |
| TTGACCTCCCAGCTCTCAGG+TGG | - | chr7_1:73218714-73218733 | Msa1036780:intron | 60.0% | |
| TTAGCCACCTGAGAGCTGGG+AGG | + | chr7_1:73218721-73218740 | None:intergenic | 60.0% | |
| GCTGCCATTGCTAGGCTTGC+AGG | - | chr7_1:73219098-73219117 | Msa1036780:CDS | 60.0% | |
| GCTCTACGTTCGGACTCACG+GGG | + | chr7_1:73219239-73219258 | None:intergenic | 60.0% | |
| CTACGTTCGGACTCACGGGG+TGG | + | chr7_1:73219236-73219255 | None:intergenic | 65.0% | |
| CTACGTTCGGACTCACGGGG+TGG | + | chr7_1:73219236-73219255 | None:intergenic | 65.0% | |
| !!! | GAAGAGCGCCCCTGCCGCCG+AGG | - | chr7_1:73218554-73218573 | Msa1036780:intron | 80.0% |
| !!! | GAAGAGCGCCCCTGCCGCCG+AGG | - | chr7_1:73218554-73218573 | Msa1036780:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73217449 | 73219265 | 73217449 | ID=Msa1036780;Name=Msa1036780 |
| chr7_1 | mRNA | 73217449 | 73219265 | 73217449 | ID=Msa1036780-mRNA-1;Parent=Msa1036780;Name=Msa1036780-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|0.75|0.2|5|0|493 |
| chr7_1 | exon | 73219025 | 73219265 | 73219025 | ID=Msa1036780-mRNA-1:exon:17994;Parent=Msa1036780-mRNA-1 |
| chr7_1 | exon | 73218730 | 73218917 | 73218730 | ID=Msa1036780-mRNA-1:exon:17993;Parent=Msa1036780-mRNA-1 |
| chr7_1 | exon | 73218634 | 73218705 | 73218634 | ID=Msa1036780-mRNA-1:exon:17992;Parent=Msa1036780-mRNA-1 |
| chr7_1 | exon | 73217942 | 73218532 | 73217942 | ID=Msa1036780-mRNA-1:exon:17991;Parent=Msa1036780-mRNA-1 |
| chr7_1 | exon | 73217449 | 73217835 | 73217449 | ID=Msa1036780-mRNA-1:exon:17990;Parent=Msa1036780-mRNA-1 |
| chr7_1 | CDS | 73219025 | 73219265 | 73219025 | ID=Msa1036780-mRNA-1:cds;Parent=Msa1036780-mRNA-1 |
| chr7_1 | CDS | 73218730 | 73218917 | 73218730 | ID=Msa1036780-mRNA-1:cds;Parent=Msa1036780-mRNA-1 |
| chr7_1 | CDS | 73218634 | 73218705 | 73218634 | ID=Msa1036780-mRNA-1:cds;Parent=Msa1036780-mRNA-1 |
| chr7_1 | CDS | 73217942 | 73218532 | 73217942 | ID=Msa1036780-mRNA-1:cds;Parent=Msa1036780-mRNA-1 |
| chr7_1 | CDS | 73217449 | 73217835 | 73217449 | ID=Msa1036780-mRNA-1:cds;Parent=Msa1036780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
