AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038140 MtrunA17_Chr7g0274471 96.372 441 14 1 1 439 1 441 0.0 869
Msa1038140 MtrunA17_Chr1g0190301 54.433 406 131 9 47 437 19 385 9.05e-131 382
Msa1038140 MtrunA17_Chr7g0261911 43.645 417 201 9 1 388 26 437 1.44e-93 290
Msa1038140 MtrunA17_Chr1g0175091 52.542 177 70 5 203 375 247 413 6.48e-50 175
Msa1038140 MtrunA17_Chr7g0258551 53.147 143 66 1 215 357 211 352 7.87e-48 168
Msa1038140 MtrunA17_Chr2g0291021 53.691 149 67 1 216 362 49 197 1.66e-46 163
Msa1038140 MtrunA17_Chr7g0254981 44.382 178 89 2 182 349 9 186 1.08e-45 159
Msa1038140 MtrunA17_Chr6g0461641 51.974 152 57 3 212 347 38 189 6.49e-41 150
Msa1038140 MtrunA17_Chr5g0417521 35.938 192 99 3 212 381 11 200 6.96e-35 132
Msa1038140 MtrunA17_Chr5g0409731 45.342 161 76 3 216 364 25 185 2.78e-34 129
Msa1038140 MtrunA17_Chr8g0356501 36.170 188 105 4 202 377 23 207 3.02e-34 130
Msa1038140 MtrunA17_Chr2g0321461 42.767 159 70 3 212 349 41 199 5.13e-34 131
Msa1038140 MtrunA17_Chr4g0042451 37.113 194 95 5 212 381 13 203 2.81e-33 128
Msa1038140 MtrunA17_Chr2g0310011 40.690 145 77 2 201 339 20 161 1.34e-31 123
Msa1038140 MtrunA17_Chr1g0175071 40.252 159 92 2 190 348 153 308 3.76e-30 119
Msa1038140 MtrunA17_Chr2g0290991 40.136 147 76 1 216 350 39 185 1.71e-28 114
Msa1038140 MtrunA17_Chr1g0197171 38.889 144 79 1 216 350 44 187 1.06e-27 111
Msa1038140 MtrunA17_Chr7g0242521 43.511 131 60 3 216 338 13 137 2.54e-27 109
Msa1038140 MtrunA17_Chr7g0258531 40.625 160 78 5 188 341 191 339 8.29e-24 102
Msa1038140 MtrunA17_Chr1g0175081 55.405 74 31 1 203 276 11 82 3.42e-23 93.6
Msa1038140 MtrunA17_Chr1g0162931 67.857 56 18 0 217 272 19 74 1.23e-19 88.6
Msa1038140 MtrunA17_Chr2g0288601 63.793 58 21 0 217 274 72 129 1.95e-19 84.0
Msa1038140 MtrunA17_Chr1g0210911 66.071 56 19 0 217 272 23 78 3.49e-19 88.2
Msa1038140 MtrunA17_Chr3g0095611 57.895 57 24 0 216 272 19 75 1.52e-18 84.0
Msa1038140 MtrunA17_Chr2g0320231 60.294 68 26 1 217 284 98 164 1.94e-18 86.7
Msa1038140 MtrunA17_Chr8g0379121 53.247 77 32 1 217 289 112 188 2.47e-18 86.7
Msa1038140 MtrunA17_Chr7g0243081 62.500 56 21 0 217 272 72 127 3.07e-18 85.9
Msa1038140 MtrunA17_Chr8g0366281 40.945 127 64 2 210 336 167 282 9.41e-18 84.3
Msa1038140 MtrunA17_Chr6g0479431 56.164 73 30 1 217 287 203 275 1.51e-17 84.0
Msa1038140 MtrunA17_Chr1g0154261 66.071 56 19 0 217 272 127 182 1.52e-17 82.8
Msa1038140 MtrunA17_Chr5g0410741 61.667 60 23 0 213 272 216 275 1.45e-16 81.3
Msa1038140 MtrunA17_Chr3g0109981 61.667 60 23 0 213 272 271 330 2.75e-16 80.9
Msa1038140 MtrunA17_Chr2g0283951 68.000 50 16 0 217 266 90 139 1.18e-15 78.2
Msa1038140 MtrunA17_Chr2g0304841 54.930 71 30 2 212 282 209 277 1.92e-15 78.6
Msa1038140 MtrunA17_Chr7g0275401 66.667 54 17 1 216 269 192 244 2.87e-15 76.3
Msa1038140 MtrunA17_Chr4g0067981 46.739 92 40 2 216 299 215 305 2.17e-14 75.5
Msa1038140 MtrunA17_Chr3g0137101 60.345 58 22 1 212 269 194 250 1.48e-13 72.8
Msa1038140 MtrunA17_Chr4g0009901 53.030 66 28 2 216 281 168 230 1.55e-13 70.9
Msa1038140 MtrunA17_Chr1g0198601 54.839 62 28 0 216 277 211 272 1.72e-13 71.6
Msa1038140 MtrunA17_Chr4g0045361 62.963 54 20 0 216 269 274 327 2.10e-13 71.6
Msa1038140 MtrunA17_Chr4g0009981 50.649 77 34 3 205 281 106 178 4.03e-13 69.3
Msa1038140 MtrunA17_Chr4g0062921 53.030 66 31 0 210 275 229 294 4.53e-13 70.9
Msa1038140 MtrunA17_Chr1g0149841 53.623 69 31 1 212 280 187 254 4.95e-13 70.9
Msa1038140 MtrunA17_Chr4g0031961 51.562 64 30 1 206 269 121 183 8.69e-13 68.9
Msa1038140 MtrunA17_Chr1g0161431 62.963 54 19 1 216 269 200 252 9.98e-13 70.1
Msa1038140 MtrunA17_Chr4g0074401 51.562 64 30 1 212 275 199 261 1.07e-12 70.1
Msa1038140 MtrunA17_Chr1g0149831 57.627 59 21 1 211 269 123 177 1.41e-12 67.0
Msa1038140 MtrunA17_Chr5g0422621 58.929 56 23 0 214 269 196 251 1.74e-12 68.6
Msa1038140 MtrunA17_Chr4g0074411 53.125 64 29 1 212 275 197 259 1.75e-12 69.3
Msa1038140 MtrunA17_Chr4g0074421 55.357 56 24 1 211 266 128 182 3.70e-12 65.1
Msa1038140 MtrunA17_Chr5g0402631 57.895 57 24 0 213 269 211 267 4.42e-12 67.0
Msa1038140 MtrunA17_Chr2g0294911 54.237 59 26 1 211 269 206 263 7.97e-12 67.4
Msa1038140 MtrunA17_Chr4g0054981 37.895 95 58 1 175 269 269 362 2.14e-11 65.9
Msa1038140 MtrunA17_Chr7g0255711 53.704 54 24 1 216 269 91 143 4.14e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038140 AT5G29000.2 44.330 388 163 8 3 360 14 378 9.59e-87 271
Msa1038140 AT5G29000.1 46.608 339 142 7 52 360 6 335 6.74e-84 262
Msa1038140 AT5G29000.3 46.608 339 142 7 52 360 6 335 6.74e-84 262
Msa1038140 AT3G04450.4 47.841 301 128 7 93 377 71 358 2.03e-78 249
Msa1038140 AT3G04450.2 47.841 301 128 7 93 377 71 358 2.03e-78 249
Msa1038140 AT3G04450.1 47.841 301 128 7 93 377 111 398 4.12e-78 249
Msa1038140 AT4G28610.1 51.481 270 116 12 106 363 105 371 2.41e-71 231
Msa1038140 AT2G20400.1 45.420 262 102 8 111 345 113 360 1.53e-51 179
Msa1038140 AT2G20400.2 45.627 263 101 9 111 345 113 361 2.24e-50 176
Msa1038140 AT2G01060.1 49.162 179 85 2 215 392 14 187 4.08e-49 169
Msa1038140 AT5G29000.4 37.864 309 142 7 3 284 14 299 1.36e-46 163
Msa1038140 AT3G13040.3 57.143 147 58 1 208 349 233 379 4.56e-46 165
Msa1038140 AT3G13040.1 57.143 147 58 1 208 349 233 379 4.56e-46 165
Msa1038140 AT3G13040.2 57.143 147 58 1 208 349 233 379 4.56e-46 165
Msa1038140 AT5G06800.1 49.405 168 79 2 185 347 156 322 5.60e-46 163
Msa1038140 AT5G06800.2 48.256 172 80 2 185 347 156 327 4.06e-45 161
Msa1038140 AT3G04450.3 44.828 203 90 5 93 282 111 304 1.43e-43 155
Msa1038140 AT3G24120.1 44.444 171 83 3 204 362 29 199 1.48e-39 144
Msa1038140 AT4G13640.1 51.408 142 55 3 216 344 37 177 2.31e-39 143
Msa1038140 AT3G24120.2 43.678 174 83 4 204 362 29 202 1.50e-37 139
Msa1038140 AT4G13640.2 50.345 145 55 4 216 344 37 180 2.42e-37 138
Msa1038140 AT1G69580.1 43.750 160 73 1 205 347 23 182 1.22e-36 137
Msa1038140 AT3G04030.3 39.773 176 91 2 204 364 33 208 5.35e-36 137
Msa1038140 AT1G69580.2 44.099 161 72 4 205 347 23 183 3.09e-35 134
Msa1038140 AT5G18240.1 43.678 174 73 5 212 364 41 210 7.23e-35 134
Msa1038140 AT5G18240.4 43.678 174 73 5 212 364 41 210 7.23e-35 134
Msa1038140 AT1G79430.2 40.323 186 86 4 201 364 19 201 1.50e-34 132
Msa1038140 AT5G45580.1 33.617 235 124 3 216 432 7 227 2.15e-33 127
Msa1038140 AT5G45580.2 33.617 235 124 3 216 432 23 243 2.19e-33 127
Msa1038140 AT3G04030.2 38.636 176 92 3 204 364 33 207 5.59e-33 129
Msa1038140 AT5G18240.5 43.103 174 72 6 212 364 41 208 6.22e-32 126
Msa1038140 AT2G01060.2 45.455 143 72 2 251 392 1 138 1.30e-30 118
Msa1038140 AT3G04030.1 37.500 176 89 3 204 364 33 202 1.42e-30 122
Msa1038140 AT5G18240.2 41.379 174 71 6 212 364 41 204 1.97e-29 119
Msa1038140 AT5G18240.3 41.379 174 71 6 212 364 41 204 1.97e-29 119
Msa1038140 AT3G12730.1 40.876 137 73 1 216 344 23 159 1.01e-28 113
Msa1038140 AT5G06800.3 49.020 102 47 1 185 281 156 257 1.00e-23 100
Msa1038140 AT4G04605.1 56.522 69 30 0 217 285 15 83 3.36e-19 86.3
Msa1038140 AT1G14600.1 67.857 56 18 0 217 272 24 79 4.38e-19 87.0
Msa1038140 AT2G42660.1 59.016 61 25 0 217 277 51 111 7.75e-19 86.3
Msa1038140 AT5G42630.2 66.071 56 19 0 217 272 106 161 6.75e-18 82.8
Msa1038140 AT2G40260.1 60.938 64 23 1 217 280 83 144 7.32e-18 85.5
Msa1038140 AT5G42630.1 66.071 56 19 0 217 272 106 161 1.55e-17 82.8
Msa1038140 AT2G02060.2 66.038 53 18 0 217 269 30 82 1.76e-17 82.4
Msa1038140 AT2G02060.1 66.038 53 18 0 217 269 30 82 1.76e-17 82.4
Msa1038140 AT1G79430.1 37.410 139 62 4 248 364 1 136 3.48e-17 82.0
Msa1038140 AT2G38300.1 60.714 56 22 0 217 272 55 110 5.18e-17 82.4
Msa1038140 AT4G17695.1 64.286 56 20 0 217 272 165 220 9.86e-17 81.3
Msa1038140 AT1G32240.2 61.667 60 23 0 213 272 210 269 1.39e-16 81.3
Msa1038140 AT1G32240.1 61.667 60 23 0 213 272 210 269 1.65e-16 81.3
Msa1038140 AT3G04030.5 35.606 132 70 2 248 364 1 132 1.90e-16 80.5
Msa1038140 AT5G16560.1 61.667 60 23 0 213 272 216 275 1.97e-16 81.3
Msa1038140 AT2G06020.1 55.738 61 27 0 212 272 82 142 5.00e-16 79.0
Msa1038140 AT4G04580.1 38.776 98 58 1 217 312 15 112 1.15e-15 75.1
Msa1038140 AT1G25550.1 56.061 66 29 0 213 278 206 271 6.66e-15 76.3
Msa1038140 AT2G03500.1 50.000 76 38 0 207 282 224 299 3.39e-14 74.7
Msa1038140 AT3G16857.3 68.519 54 16 1 216 269 167 219 1.01e-13 73.6
Msa1038140 AT3G16857.1 68.519 54 16 1 216 269 237 289 1.17e-13 73.6
Msa1038140 AT3G16857.2 68.519 54 16 1 216 269 237 289 1.19e-13 73.6
Msa1038140 AT4G37180.1 47.500 80 41 1 203 281 197 276 1.72e-13 72.0
Msa1038140 AT4G37180.2 47.500 80 41 1 203 281 204 283 1.81e-13 72.0
Msa1038140 AT3G62670.1 51.389 72 31 1 216 283 211 282 2.79e-13 71.6
Msa1038140 AT5G58080.1 56.667 60 25 1 210 269 188 246 4.57e-13 71.6
Msa1038140 AT1G68670.1 56.667 60 26 0 216 275 215 274 8.63e-13 69.7
Msa1038140 AT5G59570.2 52.459 61 28 1 209 269 134 193 1.19e-12 68.9
Msa1038140 AT5G59570.1 52.459 61 28 1 209 269 134 193 1.19e-12 68.9
Msa1038140 AT2G25180.1 59.322 59 23 1 211 269 190 247 1.59e-12 70.1
Msa1038140 AT5G44190.1 54.237 59 26 1 214 272 145 202 1.87e-12 68.9
Msa1038140 AT5G44190.2 54.237 59 26 1 214 272 145 202 2.04e-12 68.6
Msa1038140 AT1G49560.1 55.385 65 29 0 216 280 192 256 6.74e-12 67.0
Msa1038140 AT2G40970.1 42.667 75 42 1 195 269 84 157 6.83e-12 65.9
Msa1038140 AT4G31920.1 53.226 62 28 1 213 274 180 240 7.03e-12 67.8
Msa1038140 AT2G20570.1 38.947 95 52 2 213 302 150 243 7.04e-12 67.4
Msa1038140 AT3G46640.3 55.556 54 23 1 216 269 144 196 8.39e-12 66.6
Msa1038140 AT3G46640.2 55.556 54 23 1 216 269 144 196 8.96e-12 66.2
Msa1038140 AT3G46640.1 55.556 54 23 1 216 269 144 196 8.96e-12 66.2
Msa1038140 AT4G04555.1 49.180 61 30 1 217 277 15 74 1.01e-11 62.0
Msa1038140 AT1G25550.2 59.259 54 22 0 213 266 206 259 1.16e-11 65.5
Msa1038140 AT1G67710.3 53.968 63 29 0 218 280 121 183 1.20e-11 66.6
Msa1038140 AT2G20570.2 40.000 90 48 2 218 302 171 259 1.37e-11 66.6
Msa1038140 AT1G67710.2 53.968 63 29 0 218 280 130 192 1.41e-11 66.6
Msa1038140 AT1G67710.1 53.968 63 29 0 218 280 195 257 1.50e-11 66.6
Msa1038140 AT5G05090.1 53.704 54 24 1 216 269 81 133 1.61e-11 65.1
Msa1038140 AT3G04030.4 32.576 132 68 3 248 364 1 126 1.86e-11 65.5
Msa1038140 AT3G12730.2 32.381 105 63 1 248 344 1 105 2.26e-11 62.8
Msa1038140 AT3G10760.1 53.704 54 24 1 216 269 105 157 2.60e-11 65.1
Msa1038140 AT3G25790.1 36.090 133 72 3 152 275 127 255 2.77e-11 65.1
Msa1038140 AT2G01760.3 43.902 82 43 2 216 295 135 215 3.76e-11 64.3
Msa1038140 AT2G01760.1 43.902 82 43 2 216 295 200 280 4.15e-11 64.7
Msa1038140 AT5G18240.6 35.075 134 64 6 248 364 1 128 6.11e-11 63.9
Msa1038140 AT2G01760.2 43.902 82 43 2 216 295 228 308 6.24e-11 64.3
Msa1038140 AT1G49190.1 46.377 69 34 1 216 281 215 283 7.59e-11 64.3
Msa1038140 AT4G37180.3 48.438 64 33 0 203 266 197 260 7.79e-11 63.2

Find 127 sgRNAs with CRISPR-Local

Find 437 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATACCTTCTGGTGATTC+AGG 0.183649 7_1:+74938638 None:intergenic
ACCTGTTCTTCCCAGTCTTA+TGG 0.207188 7_1:-74939981 Msa1038140:CDS
CTTTCTCCGGGTATGTCTTT+AGG 0.237158 7_1:+74934989 None:intergenic
CCAAGAAGCTGACTCCAATT+TGG 0.256047 7_1:+74939503 None:intergenic
ATTAGATTCAAGACACCTTT+TGG 0.275565 7_1:+74938847 None:intergenic
GACTCTGTCCTTCTTCTTGT+TGG 0.276221 7_1:+74941479 None:intergenic
ATGATTCTGTTAATCCAAAT+TGG 0.276239 7_1:-74939517 Msa1038140:CDS
TCTGGACTCCAACGCATTCT+AGG 0.278668 7_1:+74939015 None:intergenic
CAAGAATATAAAACAAATCT+AGG 0.299079 7_1:+74934731 None:intergenic
CCAAATTGGAGTCAGCTTCT+TGG 0.308074 7_1:-74939503 Msa1038140:CDS
GATCCATTGCCAGATATTCT+TGG 0.312892 7_1:-74939659 Msa1038140:CDS
TGGTGATTCAGGTTTGTATC+TGG 0.322990 7_1:+74938649 None:intergenic
TACATCATGGGAACTTTCTC+CGG 0.328433 7_1:+74934976 None:intergenic
GATGATGATTAGATTAGGTT+AGG 0.346861 7_1:+74941526 None:intergenic
CCCTTCGCTTCTCAGGCATT+AGG 0.349271 7_1:-74939761 Msa1038140:CDS
TCAGGAAAACCAAGAATATC+TGG 0.353256 7_1:+74939650 None:intergenic
AAGAGAAGATACCTTGAAAT+CGG 0.355737 7_1:+74941308 None:intergenic
AGATTCTCCCTTCGCTTCTC+AGG 0.383362 7_1:-74939768 Msa1038140:CDS
ACAAAAGCTTCGTGAAGTTC+TGG 0.384632 7_1:+74938997 None:intergenic
GTGTGTATATTGTCTACTTT+GGG 0.388260 7_1:+74941633 None:intergenic
AATGAAGTTTAAGTCATTGC+TGG 0.390035 7_1:+74934779 None:intergenic
TGCTGTGAAACGGGAGGAAA+AGG 0.393018 7_1:+74939806 None:intergenic
ATTGAAATCAGGACAGATAA+AGG 0.395646 7_1:-74940045 Msa1038140:intron
CTCCCGTTTCACAGCATGAT+AGG 0.396353 7_1:-74939799 Msa1038140:CDS
GAATTATGGTTACAGGAGTA+AGG 0.405297 7_1:-74935356 Msa1038140:intron
CGTGTGTATATTGTCTACTT+TGG 0.413349 7_1:+74941632 None:intergenic
CAGAAGCAGCATACACCATC+TGG 0.414147 7_1:-74939099 Msa1038140:CDS
TCCATAAGACTGGGAAGAAC+AGG 0.416578 7_1:+74939980 None:intergenic
AATTGAGGAAATGAAATCTC+TGG 0.418669 7_1:-74935466 Msa1038140:CDS
ATAATTGCTTTCCATAAGAC+TGG 0.420183 7_1:+74939970 None:intergenic
TGCCTATCATGCTGTGAAAC+GGG 0.423721 7_1:+74939797 None:intergenic
GGAGGAAAAGGGACGCCGCC+AGG 0.438286 7_1:+74939818 None:intergenic
AAAGATGAACGGGATAAATC+AGG 0.451170 7_1:-74935028 Msa1038140:CDS
TTTGCTTCCTGCTTACATCA+TGG 0.453886 7_1:+74934963 None:intergenic
ATCTACCCTCTCATGTTCAT+TGG 0.454358 7_1:+74934919 None:intergenic
GTTGATGCTGATGCTGAAGC+TGG 0.454882 7_1:+74939054 None:intergenic
TGTTGTTGAACCAACACAAC+AGG 0.455318 7_1:-74939471 Msa1038140:intron
TTGCTTCCTGCTTACATCAT+GGG 0.458983 7_1:+74934964 None:intergenic
AGAATATCTGGCAATGGATC+TGG 0.459308 7_1:+74939662 None:intergenic
TGCACCTTCTGCTGCAGTGT+TGG 0.460592 7_1:-74935095 Msa1038140:CDS
ATGAAGAATTGTTGGAGAAG+AGG 0.461184 7_1:+74941360 None:intergenic
CTGACGTGCCTCCAACAAAA+CGG 0.464112 7_1:-74934886 Msa1038140:CDS
GGTGAACGATGAAAAGAATC+CGG 0.468237 7_1:+74939938 None:intergenic
TGACGTGCCTCCAACAAAAC+GGG 0.473833 7_1:-74934885 Msa1038140:CDS
ATTATATCATTATGATAAGC+AGG 0.475358 7_1:+74934817 None:intergenic
TTGCCTATCATGCTGTGAAA+CGG 0.481947 7_1:+74939796 None:intergenic
TCATCTCAAGATGTTTCCCT+TGG 0.484323 7_1:+74935170 None:intergenic
CACGACGCCACCTTCTTCTC+CGG 0.487049 7_1:-74935071 Msa1038140:CDS
CACATTAGTTGAAACAATCA+TGG 0.488751 7_1:+74934664 None:intergenic
ATGATGATTAGATTAGGTTA+GGG 0.491488 7_1:+74941527 None:intergenic
ATTAGGTGACAATGTGTCTT+CGG 0.494529 7_1:-74939744 Msa1038140:CDS
CATGCAGAGGCTACTCCAAA+AGG 0.496159 7_1:-74938862 Msa1038140:intron
CAGCAGAAGGTGCATTTGAA+GGG 0.498153 7_1:+74935104 None:intergenic
ACATCATGGGAACTTTCTCC+GGG 0.498537 7_1:+74934977 None:intergenic
AGGGAATCACTGAAGCATTA+CGG 0.500945 7_1:-74935336 Msa1038140:CDS
AAATTATCCACCGGAGAAGA+AGG 0.501480 7_1:+74935061 None:intergenic
TTTGTGATGATGATTAGATT+AGG 0.502195 7_1:+74941521 None:intergenic
GTTTAAGTCATTGCTGGCTA+CGG 0.502449 7_1:+74934785 None:intergenic
GCAGCAGAAGGTGCATTTGA+AGG 0.504283 7_1:+74935103 None:intergenic
TCAATCAATGATGAACGTCC+TGG 0.509664 7_1:-74939836 Msa1038140:CDS
AGAGAAGATACCTTGAAATC+GGG 0.512720 7_1:+74941309 None:intergenic
GTGAACGATGAAAAGAATCC+GGG 0.513629 7_1:+74939939 None:intergenic
TGATGTAAGCAGGAAGCAAA+TGG 0.519248 7_1:-74934960 Msa1038140:CDS
GGAACTTGTAGATATAGTAT+TGG 0.525752 7_1:-74934689 Msa1038140:three_prime_UTR
GAAGGTGCATTTGAAGGGGA+AGG 0.532963 7_1:+74935109 None:intergenic
TCCATATATGTACCTGGAGG+TGG 0.533300 7_1:+74938788 None:intergenic
AAACTAAGCCTAGAATGCGT+TGG 0.536261 7_1:-74939023 Msa1038140:CDS
TACTATATCTACAAGTTCCA+TGG 0.537918 7_1:+74934693 None:intergenic
ACCTAATGCCTGAGAAGCGA+AGG 0.539904 7_1:+74939760 None:intergenic
CATGATTGTTTCAACTAATG+TGG 0.542610 7_1:-74934663 Msa1038140:three_prime_UTR
TACTCTCACTACCACCAAGC+TGG 0.543524 7_1:+74938962 None:intergenic
ATTAGGTTAGGGCGATTAGC+CGG 0.543717 7_1:+74941538 None:intergenic
AGAAAATGATGATATATCGT+GGG 0.544394 7_1:-74939687 Msa1038140:CDS
AAAGTTCCCATGATGTAAGC+AGG 0.550489 7_1:-74934970 Msa1038140:CDS
GTGGAAGCAGTCAACCAGCT+TGG 0.551472 7_1:-74938976 Msa1038140:CDS
GATGTAGCTTGCAATGAGGC+AGG 0.552385 7_1:+74939893 None:intergenic
GGACTCTGCCAACAAGAAGA+AGG 0.554601 7_1:-74941487 Msa1038140:five_prime_UTR
GAGAAACAAACCTGTTGTGT+TGG 0.559790 7_1:+74939461 None:intergenic
AATTATGGTTACAGGAGTAA+GGG 0.560396 7_1:-74935355 Msa1038140:intron
AAGAATATAAAACAAATCTA+GGG 0.570820 7_1:+74934732 None:intergenic
AAGAAAATGATGATATATCG+TGG 0.571936 7_1:-74939688 Msa1038140:CDS
TGAAGCATTACGGTTGCAGA+TGG 0.573866 7_1:-74935326 Msa1038140:CDS
TTGAATCTAATGAATGTTGA+GGG 0.574014 7_1:-74938835 Msa1038140:CDS
CAGATTCAAATTGAAAACCA+AGG 0.574230 7_1:-74935187 Msa1038140:CDS
TTTGCTGTCAGACCCCTGAC+AGG 0.580082 7_1:+74939917 None:intergenic
GAAACAGATCGGTGACAACA+AGG 0.582009 7_1:-74935134 Msa1038140:CDS
AAACCAAGAATATCTGGCAA+TGG 0.585936 7_1:+74939656 None:intergenic
TAATTGTTATACAGATTCAA+AGG 0.586802 7_1:-74935216 Msa1038140:intron
TTTCATCGTTCACCTGTCAG+GGG 0.589580 7_1:-74939929 Msa1038140:CDS
GAAGCAGTCAACCAGCTTGG+TGG 0.594269 7_1:-74938973 Msa1038140:CDS
GCTGTGAAACGGGAGGAAAA+GGG 0.594959 7_1:+74939807 None:intergenic
CTCCTACGCTACTTATCTTG+CGG 0.595355 7_1:+74941600 None:intergenic
CGCCGCAAGATAAGTAGCGT+AGG 0.604254 7_1:-74941602 Msa1038140:five_prime_UTR
GTAAAACGAAACCCACAAGC+AGG 0.606584 7_1:+74934607 None:intergenic
AGATTCAAATTGAAAACCAA+GGG 0.608265 7_1:-74935186 Msa1038140:CDS
AGAACAGGTGAAGACGAAGA+AGG 0.608881 7_1:+74939995 None:intergenic
AGGTGAAGACGAAGAAGGCA+TGG 0.611132 7_1:+74940000 None:intergenic
TAATTGCTTTCCATAAGACT+GGG 0.614268 7_1:+74939971 None:intergenic
TTTGAGAAACAGAAACAGAT+CGG 0.614995 7_1:-74935145 Msa1038140:CDS
GACGCCACCTTCTTCTCCGG+TGG 0.615674 7_1:-74935068 Msa1038140:CDS
TTCTGTCCAGCATGATCGGG+TGG 0.617322 7_1:-74939621 Msa1038140:CDS
GTGTCCAACACTGCAGCAGA+AGG 0.618637 7_1:+74935091 None:intergenic
AAGTTACCAATGAACATGAG+AGG 0.619833 7_1:-74934925 Msa1038140:CDS
GCGACTTCATGAACAACTTG+AGG 0.620878 7_1:-74935293 Msa1038140:intron
AAGCAATTATATGAAACCCC+CGG 0.622265 7_1:-74939957 Msa1038140:CDS
CTTGAATCTAATGAATGTTG+AGG 0.622537 7_1:-74938836 Msa1038140:CDS
AAGGTGCATTTGAAGGGGAA+GGG 0.624076 7_1:+74935110 None:intergenic
AGTTACCAATGAACATGAGA+GGG 0.634728 7_1:-74934924 Msa1038140:CDS
AGCAGAAGGTGCATTTGAAG+GGG 0.635905 7_1:+74935105 None:intergenic
ACAGGTCGAACACTTCTGAT+CGG 0.639592 7_1:+74939863 None:intergenic
AGATTGTTGACTTCTCCAGA+TGG 0.656610 7_1:+74939084 None:intergenic
CGATGATGTAGCTTGCAATG+AGG 0.659256 7_1:+74939889 None:intergenic
AAACAGATCGGTGACAACAA+GGG 0.659584 7_1:-74935133 Msa1038140:CDS
GAAAATGATGATATATCGTG+GGG 0.660394 7_1:-74939686 Msa1038140:CDS
CTATCATGCTGTGAAACGGG+AGG 0.666909 7_1:+74939800 None:intergenic
GACATTCCTAAAGACATACC+CGG 0.667307 7_1:-74934995 Msa1038140:CDS
TGAACGATGAAAAGAATCCG+GGG 0.672098 7_1:+74939940 None:intergenic
CCTAATGCCTGAGAAGCGAA+GGG 0.672541 7_1:+74939761 None:intergenic
ATCAATGATGAACGTCCTGG+CGG 0.673643 7_1:-74939833 Msa1038140:CDS
TACAAACCTGAATCACCAGA+AGG 0.673750 7_1:-74938644 Msa1038140:intron
TCATCATTGATTGAAAACAC+AGG 0.675468 7_1:+74939845 None:intergenic
TTATCCACCGGAGAAGAAGG+TGG 0.681900 7_1:+74935064 None:intergenic
AAGTAGACAATATACACACG+TGG 0.698142 7_1:-74941629 Msa1038140:five_prime_UTR
GAGAAGTGAATGTTGCTGAG+TGG 0.714972 7_1:+74939717 None:intergenic
CTACGCTACTTATCTTGCGG+CGG 0.721667 7_1:+74941603 None:intergenic
GAACGATGAAAAGAATCCGG+GGG 0.737762 7_1:+74939941 None:intergenic
AGTAGACAATATACACACGT+GGG 0.741629 7_1:-74941628 Msa1038140:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAAAGTTGTAT+TGG + chr7_1:74935749-74935768 None:intergenic 10.0%
!! ATATTATATACTATTAACTT+CGG - chr7_1:74938259-74938278 Msa1038140:intron 10.0%
!!! ATATTTTCACAAAATATTAA+AGG + chr7_1:74940669-74940688 None:intergenic 10.0%
!! TGGATAAGATTATTAATTAT+TGG - chr7_1:74935000-74935019 Msa1038140:CDS 15.0%
!! GGATAAGATTATTAATTATT+GGG - chr7_1:74935001-74935020 Msa1038140:CDS 15.0%
!!! TAATCCCAATAAATTATTTT+AGG - chr7_1:74935172-74935191 Msa1038140:CDS 15.0%
!! TGTACCTAAAATAATTTATT+GGG + chr7_1:74935179-74935198 None:intergenic 15.0%
!!! AATATTTTCACATTTTTTCA+AGG - chr7_1:74935398-74935417 Msa1038140:intron 15.0%
!! AATATTGTGATGTATTATTA+GGG - chr7_1:74935430-74935449 Msa1038140:intron 15.0%
!! TCGAATAAATAATATTAGAA+TGG + chr7_1:74936970-74936989 None:intergenic 15.0%
!! AATTAAGTCTTTAATTCTAA+AGG + chr7_1:74937795-74937814 None:intergenic 15.0%
!! AATATGATGATTAATTAGAT+GGG + chr7_1:74938225-74938244 None:intergenic 15.0%
!! AAATATGATGATTAATTAGA+TGG + chr7_1:74938226-74938245 None:intergenic 15.0%
!! TATAAAGACTTAAAAGATTA+GGG + chr7_1:74939543-74939562 None:intergenic 15.0%
!! TTATAAAGACTTAAAAGATT+AGG + chr7_1:74939544-74939563 None:intergenic 15.0%
!! CAACATACTAATAAAAATAA+GGG + chr7_1:74939861-74939880 None:intergenic 15.0%
!! TCAACATACTAATAAAAATA+AGG + chr7_1:74939862-74939881 None:intergenic 15.0%
!!! TTAGGTTAATTTTTTTTCTA+GGG + chr7_1:74940180-74940199 None:intergenic 15.0%
!!! ATTAGGTTAATTTTTTTTCT+AGG + chr7_1:74940181-74940200 None:intergenic 15.0%
!!! ATTTGAAATTTAAATTTTGG+TGG + chr7_1:74940467-74940486 None:intergenic 15.0%
!!! CCTATTTGAAATTTAAATTT+TGG + chr7_1:74940470-74940489 None:intergenic 15.0%
!! CCAAAATTTAAATTTCAAAT+AGG - chr7_1:74940467-74940486 Msa1038140:intron 15.0%
!! AATTTAAATTTCAAATAGGA+TGG - chr7_1:74940471-74940490 Msa1038140:intron 15.0%
!! TACTATTAGTAAACATTATT+AGG + chr7_1:74940632-74940651 None:intergenic 15.0%
!! TAATAATGTTTACTAATAGT+AGG - chr7_1:74940631-74940650 Msa1038140:intron 15.0%
!! AAGAATATAAAACAAATCTA+GGG + chr7_1:74941496-74941515 None:intergenic 15.0%
!! AAAAAAGAATGAAGAATTGT+TGG + chr7_1:74934876-74934895 None:intergenic 20.0%
!!! GTAATTGACTAGTATATTTT+TGG - chr7_1:74934980-74934999 Msa1038140:CDS 20.0%
!! ATCATACAAATTGAAAATCA+AGG + chr7_1:74935068-74935087 None:intergenic 20.0%
!! CTGTACCTAAAATAATTTAT+TGG + chr7_1:74935180-74935199 None:intergenic 20.0%
!! GAATATTGTGATGTATTATT+AGG - chr7_1:74935429-74935448 Msa1038140:intron 20.0%
!! AGAAGTAATTTGAGAAAAAA+GGG + chr7_1:74935648-74935667 None:intergenic 20.0%
!!! AGTTTGTCTTTTTCTTATAA+AGG - chr7_1:74935831-74935850 Msa1038140:intron 20.0%
!! TTCTATTGAAAATTGAAATC+AGG - chr7_1:74936169-74936188 Msa1038140:intron 20.0%
!!! ATATATCATCATTTTCTTGA+AGG + chr7_1:74936535-74936554 None:intergenic 20.0%
!!! AATGTCAAAAAAACTGATTT+TGG - chr7_1:74936656-74936675 Msa1038140:intron 20.0%
!!! ATGTCAAAAAAACTGATTTT+GGG - chr7_1:74936657-74936676 Msa1038140:intron 20.0%
!! TCTAATATTATTTATTCGAG+AGG - chr7_1:74936971-74936990 Msa1038140:intron 20.0%
!! GTAAGACATTAATATACATT+TGG - chr7_1:74938148-74938167 Msa1038140:intron 20.0%
!! TATTATTTAGTATGTTGACA+TGG - chr7_1:74938411-74938430 Msa1038140:intron 20.0%
!!! TGGTTTTTTCTTTTTAGTTT+GGG + chr7_1:74938825-74938844 None:intergenic 20.0%
!!! TTGGTTTTTTCTTTTTAGTT+TGG + chr7_1:74938826-74938845 None:intergenic 20.0%
!! TGTAAAAACTATTTCATGTT+AGG + chr7_1:74939462-74939481 None:intergenic 20.0%
!!! TCTTTCATTGATTAATATCT+TGG + chr7_1:74939643-74939662 None:intergenic 20.0%
!!! TGTCTATTATTTTGGTTTTA+TGG + chr7_1:74940061-74940080 None:intergenic 20.0%
!!! ATCTTCTTTGTCTATTATTT+TGG + chr7_1:74940069-74940088 None:intergenic 20.0%
!!! TTTGGATTTTTAGTAACATT+AGG + chr7_1:74940198-74940217 None:intergenic 20.0%
!!! GACTTTTCATTTTTGATTTT+TGG + chr7_1:74940216-74940235 None:intergenic 20.0%
!!! TTTCTCTCTTTTATTAAACA+TGG + chr7_1:74940256-74940275 None:intergenic 20.0%
!! TAATAGTAAGCCTAAAAATA+AGG - chr7_1:74940303-74940322 Msa1038140:intron 20.0%
!!! TATGGTTTTGAAATTTTGTT+TGG + chr7_1:74940333-74940352 None:intergenic 20.0%
!!! TACATTTAATTGTGGTTTTA+TGG + chr7_1:74940351-74940370 None:intergenic 20.0%
!!! TATTTTCAAATTTTCATGCT+TGG + chr7_1:74940383-74940402 None:intergenic 20.0%
!! AATTAATGCATTAGAAATAG+AGG - chr7_1:74940525-74940544 Msa1038140:intron 20.0%
!! ATTAATGCATTAGAAATAGA+GGG - chr7_1:74940526-74940545 Msa1038140:intron 20.0%
!!! AATATTAAAGGAGTTTTGTT+AGG + chr7_1:74940657-74940676 None:intergenic 20.0%
!! TAATTGTTATACAGATTCAA+AGG - chr7_1:74941009-74941028 Msa1038140:intron 20.0%
!! TAAAAACTTCAAAAGATGAA+CGG - chr7_1:74941186-74941205 Msa1038140:intron 20.0%
!! ATTATATCATTATGATAAGC+AGG + chr7_1:74941411-74941430 None:intergenic 20.0%
!!! ATGACTTAAACTTCATTTTT+TGG - chr7_1:74941452-74941471 Msa1038140:five_prime_UTR 20.0%
!!! TGACTTAAACTTCATTTTTT+GGG - chr7_1:74941453-74941472 Msa1038140:five_prime_UTR 20.0%
!! CAAGAATATAAAACAAATCT+AGG + chr7_1:74941497-74941516 None:intergenic 20.0%
!!! CTAGATTTGTTTTATATTCT+TGG - chr7_1:74941495-74941514 Msa1038140:five_prime_UTR 20.0%
! ATGATGATTAGATTAGGTTA+GGG + chr7_1:74934701-74934720 None:intergenic 25.0%
!! TTTGTGATGATGATTAGATT+AGG + chr7_1:74934707-74934726 None:intergenic 25.0%
! TCATCACAAAACAAAAATCT+AGG - chr7_1:74934717-74934736 Msa1038140:three_prime_UTR 25.0%
!! TTATGATTTTTCTCTCAATC+TGG - chr7_1:74935024-74935043 Msa1038140:CDS 25.0%
!!! ATTATTTTAGGTACAGATCA+AGG - chr7_1:74935184-74935203 Msa1038140:CDS 25.0%
! TTCTGACATACATATTGTAA+AGG - chr7_1:74935262-74935281 Msa1038140:intron 25.0%
! TCTGACATACATATTGTAAA+GGG - chr7_1:74935263-74935282 Msa1038140:intron 25.0%
!! CATTTTTCATGAATTAGTGT+TGG - chr7_1:74935345-74935364 Msa1038140:intron 25.0%
!! TTATTAGGGTAGTTGAATTT+TGG - chr7_1:74935444-74935463 Msa1038140:intron 25.0%
!!! TTGAATTTTGGAGAAAACTT+AGG - chr7_1:74935456-74935475 Msa1038140:CDS 25.0%
!!! TCATCTCCAAATTTTTAACT+AGG + chr7_1:74935512-74935531 None:intergenic 25.0%
! AACTACAAATAAAGCATAAC+CGG + chr7_1:74935580-74935599 None:intergenic 25.0%
! CAGAAGTAATTTGAGAAAAA+AGG + chr7_1:74935649-74935668 None:intergenic 25.0%
!!! AAGTGATACTCATTTTGAAA+CGG + chr7_1:74935681-74935700 None:intergenic 25.0%
!! AAAGTTGGAGTATTTATTGA+GGG + chr7_1:74935782-74935801 None:intergenic 25.0%
!! AAAAGTTGGAGTATTTATTG+AGG + chr7_1:74935783-74935802 None:intergenic 25.0%
!! TGTCTTTTTCTTATAAAGGA+AGG - chr7_1:74935835-74935854 Msa1038140:intron 25.0%
!! GTCTTTTTCTTATAAAGGAA+GGG - chr7_1:74935836-74935855 Msa1038140:intron 25.0%
! ATTGCAAATAGATTAAGGAA+TGG + chr7_1:74935901-74935920 None:intergenic 25.0%
! TTCCTTAATCTATTTGCAAT+TGG - chr7_1:74935901-74935920 Msa1038140:intron 25.0%
! AACCAATTGCAAATAGATTA+AGG + chr7_1:74935906-74935925 None:intergenic 25.0%
!!! GGTTAAATTTTTTACTAGTG+AGG - chr7_1:74935988-74936007 Msa1038140:intron 25.0%
!!! GGTTAAATTTTTTACTAGTG+AGG - chr7_1:74935988-74936007 Msa1038140:intron 25.0%
!! CAATTTTCAATAGAAAAAGC+AGG + chr7_1:74936164-74936183 None:intergenic 25.0%
! AAGAAAATGATGATATATCG+TGG - chr7_1:74936537-74936556 Msa1038140:intron 25.0%
! AGAAAATGATGATATATCGT+GGG - chr7_1:74936538-74936557 Msa1038140:intron 25.0%
!!! TGTCAAAAAAACTGATTTTG+GGG - chr7_1:74936658-74936677 Msa1038140:intron 25.0%
! ATGATTCTGTTAATCCAAAT+TGG - chr7_1:74936708-74936727 Msa1038140:intron 25.0%
! GTTAATAGAAATGAAAACCT+AGG + chr7_1:74936935-74936954 None:intergenic 25.0%
! TTGAATCTAATGAATGTTGA+GGG - chr7_1:74937390-74937409 Msa1038140:intron 25.0%
!!! TTTTTTTTTTTGTGGATGTG+TGG - chr7_1:74937666-74937685 Msa1038140:intron 25.0%
! TTATGTTTCTCGAAACTATA+GGG + chr7_1:74937702-74937721 None:intergenic 25.0%
!! TCTTTATCTTTCAAGGTATT+GGG + chr7_1:74937892-74937911 None:intergenic 25.0%
! GAGAAAATAGAATGATGAAT+TGG - chr7_1:74937965-74937984 Msa1038140:intron 25.0%
! ATATTAATGTCTTACATGCT+TGG + chr7_1:74938143-74938162 None:intergenic 25.0%
! CTATTAACTTCGGATAAAAA+AGG - chr7_1:74938269-74938288 Msa1038140:intron 25.0%
!!! CACATTTTTTATGCACTTTT+TGG + chr7_1:74938792-74938811 None:intergenic 25.0%
!! TCAATGTTATCTTGATGTTT+TGG + chr7_1:74938845-74938864 None:intergenic 25.0%
! TCAAGATAACATTGAACAAA+AGG - chr7_1:74938850-74938869 Msa1038140:CDS 25.0%
! AAATGATCAATGGTTAAGTT+TGG + chr7_1:74939022-74939041 None:intergenic 25.0%
! TAAGTTCACTAAATGATCAA+TGG + chr7_1:74939032-74939051 None:intergenic 25.0%
! GTTAAGATTTAGAAGAAGAA+TGG + chr7_1:74939195-74939214 None:intergenic 25.0%
! ACCTTGAATTTATTCTTGTT+TGG - chr7_1:74939213-74939232 Msa1038140:intron 25.0%
! TCCAAACAAGAATAAATTCA+AGG + chr7_1:74939217-74939236 None:intergenic 25.0%
! ACTTAATTTATTTCAGAGCA+AGG + chr7_1:74939271-74939290 None:intergenic 25.0%
! CAAAAATGCAACATCAAATA+CGG - chr7_1:74939480-74939499 Msa1038140:CDS 25.0%
! TGCAGAAGTTAAATGTTATA+GGG + chr7_1:74939578-74939597 None:intergenic 25.0%
! CCTTGCATATGTTAAATATT+TGG + chr7_1:74939698-74939717 None:intergenic 25.0%
! CCAAATATTTAACATATGCA+AGG - chr7_1:74939695-74939714 Msa1038140:CDS 25.0%
! AATGACATCATTTATCTCTT+TGG - chr7_1:74939721-74939740 Msa1038140:CDS 25.0%
!!! TTTTAGTTCGAATATGATGT+CGG + chr7_1:74939802-74939821 None:intergenic 25.0%
! TTTGTGTGAGATTTATGTTA+TGG - chr7_1:74939955-74939974 Msa1038140:CDS 25.0%
! AAATCATTTAGAAGCAAGTT+TGG - chr7_1:74940016-74940035 Msa1038140:exon 25.0%
!! TTTTCAATTGCTTCTATTCA+TGG + chr7_1:74940109-74940128 None:intergenic 25.0%
! ATACGCAATACATTTAATTG+TGG + chr7_1:74940359-74940378 None:intergenic 25.0%
! TGGAGTTTGTATTGTTAATT+GGG + chr7_1:74940437-74940456 None:intergenic 25.0%
! TAAATTTCAAATAGGATGGA+AGG - chr7_1:74940475-74940494 Msa1038140:intron 25.0%
! AAATTTCAAATAGGATGGAA+GGG - chr7_1:74940476-74940495 Msa1038140:intron 25.0%
!! AGAAATAGAGGGAAATTTTT+AGG - chr7_1:74940537-74940556 Msa1038140:intron 25.0%
!! GAAATAGAGGGAAATTTTTA+GGG - chr7_1:74940538-74940557 Msa1038140:intron 25.0%
! TTGCAAACCTAATAAGATTA+AGG - chr7_1:74940569-74940588 Msa1038140:intron 25.0%
! CTAATAAGATTAAGGAGTAA+GGG - chr7_1:74940577-74940596 Msa1038140:intron 25.0%
! TATAAGAGTAAGAATGTGAA+TGG - chr7_1:74940686-74940705 Msa1038140:intron 25.0%
!! ACATTATTGTTATTATCACC+CGG - chr7_1:74940956-74940975 Msa1038140:intron 25.0%
! AGATTCAAATTGAAAACCAA+GGG - chr7_1:74941039-74941058 Msa1038140:intron 25.0%
!! GAAGTTTTTAAATTATCCAC+CGG + chr7_1:74941176-74941195 None:intergenic 25.0%
! AAAAACTTCAAAAGATGAAC+GGG - chr7_1:74941187-74941206 Msa1038140:intron 25.0%
!! TGTGGTATTTACGTTTTATA+AGG - chr7_1:74941580-74941599 Msa1038140:five_prime_UTR 25.0%
GTGTGTATATTGTCTACTTT+GGG + chr7_1:74934595-74934614 None:intergenic 30.0%
ATCGAATGAGAGAGAAAAAT+AGG - chr7_1:74934660-74934679 Msa1038140:three_prime_UTR 30.0%
AGAGAGAAAAATAGGTTATC+CGG - chr7_1:74934668-74934687 Msa1038140:three_prime_UTR 30.0%
GATGATGATTAGATTAGGTT+AGG + chr7_1:74934702-74934721 None:intergenic 30.0%
AAGAGAAGATACCTTGAAAT+CGG + chr7_1:74934920-74934939 None:intergenic 30.0%
GTTAAAGTGATTGATGAACA+CGG + chr7_1:74935138-74935157 None:intergenic 30.0%
CTGACATACATATTGTAAAG+GGG - chr7_1:74935264-74935283 Msa1038140:intron 30.0%
! GAACAGTTTTACAACAACTT+AGG + chr7_1:74935324-74935343 None:intergenic 30.0%
! GAAAACTTAGGTACTGTTAT+TGG - chr7_1:74935468-74935487 Msa1038140:CDS 30.0%
TTATTGGAAAACTGTTCCTA+CGG - chr7_1:74935484-74935503 Msa1038140:CDS 30.0%
!! AATTTTTAACTAGGAACCGT+AGG + chr7_1:74935503-74935522 None:intergenic 30.0%
ACGGTTCCTAGTTAAAAATT+TGG - chr7_1:74935503-74935522 Msa1038140:intron 30.0%
AGAAAAAAGGGACTAAACTT+AGG + chr7_1:74935636-74935655 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG + chr7_1:74935797-74935816 None:intergenic 30.0%
TTTAAACTTGTGAGCAAAGA+AGG - chr7_1:74936025-74936044 Msa1038140:intron 30.0%
ATTGAAATCAGGACAGATAA+AGG - chr7_1:74936180-74936199 Msa1038140:intron 30.0%
TAATTGCTTTCCATAAGACT+GGG + chr7_1:74936257-74936276 None:intergenic 30.0%
ATAATTGCTTTCCATAAGAC+TGG + chr7_1:74936258-74936277 None:intergenic 30.0%
! TCATCATTGATTGAAAACAC+AGG + chr7_1:74936383-74936402 None:intergenic 30.0%
GAAAATGATGATATATCGTG+GGG - chr7_1:74936539-74936558 Msa1038140:intron 30.0%
TAGAACTGATCATCCAAATA+TGG + chr7_1:74937002-74937021 None:intergenic 30.0%
ATAATGATGTTAACATGCAG+AGG - chr7_1:74937350-74937369 Msa1038140:intron 30.0%
! ATTAGATTCAAGACACCTTT+TGG + chr7_1:74937381-74937400 None:intergenic 30.0%
CTTGAATCTAATGAATGTTG+AGG - chr7_1:74937389-74937408 Msa1038140:intron 30.0%
! TTTTTACATGGTAGATGGTA+AGG + chr7_1:74937416-74937435 None:intergenic 30.0%
ACCTGCTGTATAAAACAATA+GGG + chr7_1:74937629-74937648 None:intergenic 30.0%
TATGTTTCTCGAAACTATAG+GGG + chr7_1:74937701-74937720 None:intergenic 30.0%
GTTATGTTTCTCGAAACTAT+AGG + chr7_1:74937703-74937722 None:intergenic 30.0%
ATGTGCAACAGTTATGTATT+AGG + chr7_1:74937731-74937750 None:intergenic 30.0%
CTCTTTATCTTTCAAGGTAT+TGG + chr7_1:74937893-74937912 None:intergenic 30.0%
ATACCTTGAAAGATAAAGAG+AGG - chr7_1:74937893-74937912 Msa1038140:intron 30.0%
TACCTTGAAAGATAAAGAGA+GGG - chr7_1:74937894-74937913 Msa1038140:intron 30.0%
ATTCTTCAAGCATTCGTATT+TGG - chr7_1:74938188-74938207 Msa1038140:intron 30.0%
ACAAGTGCTTAAAATCTTAG+AGG + chr7_1:74938385-74938404 None:intergenic 30.0%
!! AGTTTTGATCTTAGCAACTT+TGG + chr7_1:74938551-74938570 None:intergenic 30.0%
GTATTATGAGCAGATTTCTA+AGG - chr7_1:74938600-74938619 Msa1038140:intron 30.0%
GTTTAAAAGGAAATGAAGTC+TGG - chr7_1:74938631-74938650 Msa1038140:intron 30.0%
!! AGTATTTCTGGAAGAATTAG+TGG + chr7_1:74938917-74938936 None:intergenic 30.0%
ATTCCTCTTATCAGTATTTC+TGG + chr7_1:74938929-74938948 None:intergenic 30.0%
TTACGATAGTTGATTACTTG+GGG + chr7_1:74939143-74939162 None:intergenic 30.0%
CTTACGATAGTTGATTACTT+GGG + chr7_1:74939144-74939163 None:intergenic 30.0%
ACTTACGATAGTTGATTACT+TGG + chr7_1:74939145-74939164 None:intergenic 30.0%
GTAATCAACTATCGTAAGTT+CGG - chr7_1:74939146-74939165 Msa1038140:intron 30.0%
GATTTAGAAGAAGAATGGTA+AGG + chr7_1:74939190-74939209 None:intergenic 30.0%
ATCACAAAGCATAACAAAAG+CGG - chr7_1:74939236-74939255 Msa1038140:intron 30.0%
CTACTAACATGCATGAAATA+CGG - chr7_1:74939418-74939437 Msa1038140:intron 30.0%
AGTTAAAATATTAGAGCTGC+TGG + chr7_1:74939507-74939526 None:intergenic 30.0%
GACTTAAAAGATTAGGGTTT+AGG + chr7_1:74939537-74939556 None:intergenic 30.0%
GTGCAGAAGTTAAATGTTAT+AGG + chr7_1:74939579-74939598 None:intergenic 30.0%
CTTATGCGACTTATAAAACT+TGG + chr7_1:74939617-74939636 None:intergenic 30.0%
!!! GTTTGGCTTTCCTTATTTTT+AGG + chr7_1:74940316-74940335 None:intergenic 30.0%
TATTGTTAATTGGGTCATTG+TGG + chr7_1:74940428-74940447 None:intergenic 30.0%
GTGGAGTTTGTATTGTTAAT+TGG + chr7_1:74940438-74940457 None:intergenic 30.0%
!! TAAATTTTGGTGGAACTTAG+TGG + chr7_1:74940457-74940476 None:intergenic 30.0%
CCTTACTCCTTAATCTTATT+AGG + chr7_1:74940579-74940598 None:intergenic 30.0%
CCTAATAAGATTAAGGAGTA+AGG - chr7_1:74940576-74940595 Msa1038140:intron 30.0%
GAAAAAGATGAGTTCAATTG+AGG - chr7_1:74940744-74940763 Msa1038140:intron 30.0%
AATTGAGGAAATGAAATCTC+TGG - chr7_1:74940759-74940778 Msa1038140:intron 30.0%
TCCATTGTTTCCTTGAATTA+TGG - chr7_1:74940855-74940874 Msa1038140:intron 30.0%
ACCATAATTCAAGGAAACAA+TGG + chr7_1:74940859-74940878 None:intergenic 30.0%
TTTCCTTGAATTATGGTTAC+AGG - chr7_1:74940862-74940881 Msa1038140:intron 30.0%
AATTATGGTTACAGGAGTAA+GGG - chr7_1:74940870-74940889 Msa1038140:intron 30.0%
CAGATTCAAATTGAAAACCA+AGG - chr7_1:74941038-74941057 Msa1038140:intron 30.0%
TTTGAGAAACAGAAACAGAT+CGG - chr7_1:74941080-74941099 Msa1038140:intron 30.0%
AATGAAGTTTAAGTCATTGC+TGG + chr7_1:74941449-74941468 None:intergenic 30.0%
TACTATATCTACAAGTTCCA+TGG + chr7_1:74941535-74941554 None:intergenic 30.0%
GGAACTTGTAGATATAGTAT+TGG - chr7_1:74941536-74941555 Msa1038140:five_prime_UTR 30.0%
CACATTAGTTGAAACAATCA+TGG + chr7_1:74941564-74941583 None:intergenic 30.0%
CATGATTGTTTCAACTAATG+TGG - chr7_1:74941562-74941581 Msa1038140:five_prime_UTR 30.0%
CGTGTGTATATTGTCTACTT+TGG + chr7_1:74934596-74934615 None:intergenic 35.0%
AAGTAGACAATATACACACG+TGG - chr7_1:74934596-74934615 Msa1038140:three_prime_UTR 35.0%
AGTAGACAATATACACACGT+GGG - chr7_1:74934597-74934616 Msa1038140:three_prime_UTR 35.0%
ATGAAGAATTGTTGGAGAAG+AGG + chr7_1:74934868-74934887 None:intergenic 35.0%
AGAGAAGATACCTTGAAATC+GGG + chr7_1:74934919-74934938 None:intergenic 35.0%
CATGAACTAACGCATATACA+TGG + chr7_1:74935103-74935122 None:intergenic 35.0%
TGTAGTTGCATCATGTTCTT+TGG - chr7_1:74935227-74935246 Msa1038140:intron 35.0%
! CAGTTTTACAACAACTTAGG+TGG + chr7_1:74935321-74935340 None:intergenic 35.0%
! AAATGCTGTCCATGTTTTGT+GGG + chr7_1:74935550-74935569 None:intergenic 35.0%
! TAAATGCTGTCCATGTTTTG+TGG + chr7_1:74935551-74935570 None:intergenic 35.0%
AACATGGACAGCATTTATTG+TGG - chr7_1:74935554-74935573 Msa1038140:intron 35.0%
AACAGTAAAAACCGTATGTG+TGG - chr7_1:74935603-74935622 Msa1038140:intron 35.0%
!!! ATACTCATTTTGAAACGGAC+GGG + chr7_1:74935676-74935695 None:intergenic 35.0%
!!! GATACTCATTTTGAAACGGA+CGG + chr7_1:74935677-74935696 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr7_1:74935927-74935946 Msa1038140:intron 35.0%
! TAGTGCTTTTAACGACAAGA+AGG - chr7_1:74935967-74935986 Msa1038140:intron 35.0%
AGTTTAAACTTGTGAGCAAC+AGG - chr7_1:74936081-74936100 Msa1038140:intron 35.0%
GTTTAAACTTGTGAGCAACA+GGG - chr7_1:74936082-74936101 Msa1038140:intron 35.0%
AGCAACAGGGTTATTTATGT+TGG - chr7_1:74936095-74936114 Msa1038140:intron 35.0%
AAGCAATTATATGAAACCCC+CGG - chr7_1:74936268-74936287 Msa1038140:intron 35.0%
ATTAGGTGACAATGTGTCTT+CGG - chr7_1:74936481-74936500 Msa1038140:intron 35.0%
AAACCAAGAATATCTGGCAA+TGG + chr7_1:74936572-74936591 None:intergenic 35.0%
TCAGGAAAACCAAGAATATC+TGG + chr7_1:74936578-74936597 None:intergenic 35.0%
TGCTGGACAGAAAAAATTTC+AGG + chr7_1:74936596-74936615 None:intergenic 35.0%
!!! TTTTTTCTGTCCAGCATGAT+CGG - chr7_1:74936600-74936619 Msa1038140:intron 35.0%
!! AAAAAACTGATTTTGGGGAG+TGG - chr7_1:74936663-74936682 Msa1038140:intron 35.0%
!! AAAAACTGATTTTGGGGAGT+GGG - chr7_1:74936664-74936683 Msa1038140:intron 35.0%
TAGAAATGAAAACCTAGGTG+AGG + chr7_1:74936930-74936949 None:intergenic 35.0%
TCGAGAGGAAAATCCATATT+TGG - chr7_1:74936986-74937005 Msa1038140:intron 35.0%
!! ATATCCTACTTTTCTGATGC+AGG - chr7_1:74937089-74937108 Msa1038140:intron 35.0%
AAATCCATATATGTACCTGG+AGG + chr7_1:74937443-74937462 None:intergenic 35.0%
GGAAAATCCATATATGTACC+TGG + chr7_1:74937446-74937465 None:intergenic 35.0%
ACAAGCTCAATTTAAGAGGA+CGG + chr7_1:74937467-74937486 None:intergenic 35.0%
TCCTCTTAAATTGAGCTTGT+TGG - chr7_1:74937467-74937486 Msa1038140:intron 35.0%
ACCAACAAGCTCAATTTAAG+AGG + chr7_1:74937471-74937490 None:intergenic 35.0%
ATAAAAATCGACATACACGC+CGG + chr7_1:74937501-74937520 None:intergenic 35.0%
!! TCCCTATTGTTTTATACAGC+AGG - chr7_1:74937625-74937644 Msa1038140:intron 35.0%
GACCTGCTGTATAAAACAAT+AGG + chr7_1:74937630-74937649 None:intergenic 35.0%
TAATGTCTTACATGCTTGGT+CGG + chr7_1:74938139-74938158 None:intergenic 35.0%
AAGACTTCAAAATGCTGAGA+TGG + chr7_1:74938312-74938331 None:intergenic 35.0%
ACTCGCTTTCAGTTCATTAT+TGG - chr7_1:74938440-74938459 Msa1038140:intron 35.0%
GCTTCTTAGTTAGCATGATA+AGG + chr7_1:74938478-74938497 None:intergenic 35.0%
TAAGGAGAGGGTTGTTTAAA+AGG - chr7_1:74938618-74938637 Msa1038140:intron 35.0%
TATGAGCAGATTTCCAAGTT+AGG - chr7_1:74938878-74938897 Msa1038140:intron 35.0%
CTTCCAGAAATACTGATAAG+AGG - chr7_1:74938923-74938942 Msa1038140:intron 35.0%
TGATAAGAGGAATCCTTGAA+TGG - chr7_1:74938936-74938955 Msa1038140:intron 35.0%
!! AATGGTTAAGTTTGGTGTGA+CGG + chr7_1:74939014-74939033 None:intergenic 35.0%
ATCTGTCGTGCATCATTTAT+GGG + chr7_1:74939080-74939099 None:intergenic 35.0%
TCACAAAGCATAACAAAAGC+GGG - chr7_1:74939237-74939256 Msa1038140:intron 35.0%
TGTCAAAGTGATAGACTTTC+AGG - chr7_1:74939355-74939374 Msa1038140:intron 35.0%
TTCTGCACATAAGCATTTAC+TGG - chr7_1:74939591-74939610 Msa1038140:CDS 35.0%
CTCTTTGGTGAAGTATGATA+CGG - chr7_1:74939736-74939755 Msa1038140:CDS 35.0%
CTTGATCAAATCATCACGAA+CGG - chr7_1:74939831-74939850 Msa1038140:CDS 35.0%
!!! TTTTTTCTAGGGTTCTCTCT+TGG + chr7_1:74940169-74940188 None:intergenic 35.0%
AGGATGGAAGGGAAAAATTT+AGG - chr7_1:74940487-74940506 Msa1038140:intron 35.0%
GGATGGAAGGGAAAAATTTA+GGG - chr7_1:74940488-74940507 Msa1038140:intron 35.0%
! TTTTTCTCAGAAGTTTCTGC+AGG + chr7_1:74940730-74940749 None:intergenic 35.0%
ACTCCTGTAACCATAATTCA+AGG + chr7_1:74940868-74940887 None:intergenic 35.0%
GAATTATGGTTACAGGAGTA+AGG - chr7_1:74940869-74940888 Msa1038140:intron 35.0%
ATATCAGACATGCCAAAACT+TGG + chr7_1:74940987-74941006 None:intergenic 35.0%
AAAGATGAACGGGATAAATC+AGG - chr7_1:74941197-74941216 Msa1038140:intron 35.0%
AAGTTACCAATGAACATGAG+AGG - chr7_1:74941300-74941319 Msa1038140:intron 35.0%
AGTTACCAATGAACATGAGA+GGG - chr7_1:74941301-74941320 Msa1038140:intron 35.0%
AAATCGGGAAAAAGCGGTAA+TGG + chr7_1:74934904-74934923 None:intergenic 40.0%
ACCTTGAAATCGGGAAAAAG+CGG + chr7_1:74934910-74934929 None:intergenic 40.0%
CATACATATTGTAAAGGGGC+TGG - chr7_1:74935268-74935287 Msa1038140:intron 40.0%
AAACTGCATCCCACAAAACA+TGG - chr7_1:74935538-74935557 Msa1038140:intron 40.0%
! TAGGTACTGTTCCACACATA+CGG + chr7_1:74935617-74935636 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr7_1:74935931-74935950 Msa1038140:intron 40.0%
TGAACGATGAAAAGAATCCG+GGG + chr7_1:74936288-74936307 None:intergenic 40.0%
GTGAACGATGAAAAGAATCC+GGG + chr7_1:74936289-74936308 None:intergenic 40.0%
GGTGAACGATGAAAAGAATC+CGG + chr7_1:74936290-74936309 None:intergenic 40.0%
! TTTTCATCGTTCACCTGTCA+GGG - chr7_1:74936295-74936314 Msa1038140:intron 40.0%
TCAATCAATGATGAACGTCC+TGG - chr7_1:74936389-74936408 Msa1038140:intron 40.0%
TTGCCTATCATGCTGTGAAA+CGG + chr7_1:74936432-74936451 None:intergenic 40.0%
AGAATATCTGGCAATGGATC+TGG + chr7_1:74936566-74936585 None:intergenic 40.0%
GATCCATTGCCAGATATTCT+TGG - chr7_1:74936566-74936585 Msa1038140:intron 40.0%
! TTTTTCTGTCCAGCATGATC+GGG - chr7_1:74936601-74936620 Msa1038140:intron 40.0%
TGTTGTTGAACCAACACAAC+AGG - chr7_1:74936754-74936773 Msa1038140:intron 40.0%
GAGAAACAAACCTGTTGTGT+TGG + chr7_1:74936767-74936786 None:intergenic 40.0%
ACTCGAACAAGAACAATCCT+AGG - chr7_1:74936806-74936825 Msa1038140:intron 40.0%
AGGTAAGTAAAGTTTGGCCT+AGG + chr7_1:74936826-74936845 None:intergenic 40.0%
AAATGAAAACCTAGGTGAGG+AGG + chr7_1:74936927-74936946 None:intergenic 40.0%
GGGAATGAACTATATGCACA+TGG + chr7_1:74937044-74937063 None:intergenic 40.0%
TATACTGTTAACAGCCGCAA+GGG + chr7_1:74937072-74937091 None:intergenic 40.0%
ATATACTGTTAACAGCCGCA+AGG + chr7_1:74937073-74937092 None:intergenic 40.0%
!! AGATTGTTGACTTCTCCAGA+TGG + chr7_1:74937144-74937163 None:intergenic 40.0%
AAACTAAGCCTAGAATGCGT+TGG - chr7_1:74937202-74937221 Msa1038140:intron 40.0%
ACAAAAGCTTCGTGAAGTTC+TGG + chr7_1:74937231-74937250 None:intergenic 40.0%
! AGAACTTCACGAAGCTTTTG+TGG - chr7_1:74937230-74937249 Msa1038140:intron 40.0%
GTCAAACGAAGGATGAGATT+AGG + chr7_1:74937301-74937320 None:intergenic 40.0%
GAAGAAACGTTCATGAGAGA+AGG + chr7_1:74937323-74937342 None:intergenic 40.0%
! GTGGCTTTTTACATGGTAGA+TGG + chr7_1:74937421-74937440 None:intergenic 40.0%
! TGGTGATTCAGGTTTGTATC+TGG + chr7_1:74937579-74937598 None:intergenic 40.0%
TACAAACCTGAATCACCAGA+AGG - chr7_1:74937581-74937600 Msa1038140:intron 40.0%
TGTATACCTTCTGGTGATTC+AGG + chr7_1:74937590-74937609 None:intergenic 40.0%
GTACACTCTTGTATACCTTC+TGG + chr7_1:74937599-74937618 None:intergenic 40.0%
! TTAATTCTAAAGGACCCGTG+CGG + chr7_1:74937785-74937804 None:intergenic 40.0%
CTCCCTCTCTTTATCTTTCA+AGG + chr7_1:74937899-74937918 None:intergenic 40.0%
AATGTCTTACATGCTTGGTC+GGG + chr7_1:74938138-74938157 None:intergenic 40.0%
! ATGAGCAGATTTCTAAGGAG+AGG - chr7_1:74938605-74938624 Msa1038140:intron 40.0%
! TGAGCAGATTTCTAAGGAGA+GGG - chr7_1:74938606-74938625 Msa1038140:intron 40.0%
!! CGACTGGATTTCAGTTTTGT+GGG + chr7_1:74938721-74938740 None:intergenic 40.0%
!! TTGTGTTGATCTTTTGCGAC+TGG + chr7_1:74938737-74938756 None:intergenic 40.0%
TCTGGAAGAATTAGTGGAGA+TGG + chr7_1:74938911-74938930 None:intergenic 40.0%
!! TGATGTTGGTTCTCCATTCA+AGG + chr7_1:74938952-74938971 None:intergenic 40.0%
GATCTGTCGTGCATCATTTA+TGG + chr7_1:74939081-74939100 None:intergenic 40.0%
CATGAAGTTCAGTAATGCCA+AGG + chr7_1:74939103-74939122 None:intergenic 40.0%
TTGGTGAAGTATGATACGGA+AGG - chr7_1:74939740-74939759 Msa1038140:CDS 40.0%
! ATTGGGTCATTGTGGCTTTA+TGG + chr7_1:74940420-74940439 None:intergenic 40.0%
AAGGAGTAAGGGATAATTGC+TGG - chr7_1:74940588-74940607 Msa1038140:intron 40.0%
! AGGGAATCACTGAAGCATTA+CGG - chr7_1:74940889-74940908 Msa1038140:intron 40.0%
ATGCCAAAACTTGGAAGTTC+CGG + chr7_1:74940978-74940997 None:intergenic 40.0%
TCATCTCAAGATGTTTCCCT+TGG + chr7_1:74941058-74941077 None:intergenic 40.0%
AAACAGATCGGTGACAACAA+GGG - chr7_1:74941092-74941111 Msa1038140:intron 40.0%
AAATTATCCACCGGAGAAGA+AGG + chr7_1:74941167-74941186 None:intergenic 40.0%
GACATTCCTAAAGACATACC+CGG - chr7_1:74941230-74941249 Msa1038140:intron 40.0%
TACATCATGGGAACTTTCTC+CGG + chr7_1:74941252-74941271 None:intergenic 40.0%
AAAGTTCCCATGATGTAAGC+AGG - chr7_1:74941255-74941274 Msa1038140:intron 40.0%
TTGCTTCCTGCTTACATCAT+GGG + chr7_1:74941264-74941283 None:intergenic 40.0%
TTTGCTTCCTGCTTACATCA+TGG + chr7_1:74941265-74941284 None:intergenic 40.0%
TGATGTAAGCAGGAAGCAAA+TGG - chr7_1:74941265-74941284 Msa1038140:intron 40.0%
ATCTACCCTCTCATGTTCAT+TGG + chr7_1:74941309-74941328 None:intergenic 40.0%
! GTTTAAGTCATTGCTGGCTA+CGG + chr7_1:74941443-74941462 None:intergenic 40.0%
!! TGGACATGTTTTAGACTCCA+TGG - chr7_1:74941515-74941534 Msa1038140:five_prime_UTR 40.0%
! TTGTGGGTTTCGTTTTACGT+AGG - chr7_1:74941623-74941642 Msa1038140:five_prime_UTR 40.0%
CTCCTACGCTACTTATCTTG+CGG + chr7_1:74934628-74934647 None:intergenic 45.0%
ATTAGGTTAGGGCGATTAGC+CGG + chr7_1:74934690-74934709 None:intergenic 45.0%
GACTCTGTCCTTCTTCTTGT+TGG + chr7_1:74934749-74934768 None:intergenic 45.0%
!!! ACCGCTTTTTCCCGATTTCA+AGG - chr7_1:74934906-74934925 Msa1038140:CDS 45.0%
TGGACAGCATTTATTGTGGC+CGG - chr7_1:74935558-74935577 Msa1038140:intron 45.0%
!!! TCATTTTGAAACGGACGGGA+CGG + chr7_1:74935672-74935691 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr7_1:74935930-74935949 Msa1038140:intron 45.0%
AGAACAGGTGAAGACGAAGA+AGG + chr7_1:74936233-74936252 None:intergenic 45.0%
ACCTGTTCTTCCCAGTCTTA+TGG - chr7_1:74936244-74936263 Msa1038140:intron 45.0%
TCCATAAGACTGGGAAGAAC+AGG + chr7_1:74936248-74936267 None:intergenic 45.0%
GAACGATGAAAAGAATCCGG+GGG + chr7_1:74936287-74936306 None:intergenic 45.0%
! CTTTTCATCGTTCACCTGTC+AGG - chr7_1:74936294-74936313 Msa1038140:intron 45.0%
TTTCATCGTTCACCTGTCAG+GGG - chr7_1:74936296-74936315 Msa1038140:intron 45.0%
! CGATGATGTAGCTTGCAATG+AGG + chr7_1:74936339-74936358 None:intergenic 45.0%
ACAGGTCGAACACTTCTGAT+CGG + chr7_1:74936365-74936384 None:intergenic 45.0%
ATCAATGATGAACGTCCTGG+CGG - chr7_1:74936392-74936411 Msa1038140:intron 45.0%
TGCCTATCATGCTGTGAAAC+GGG + chr7_1:74936431-74936450 None:intergenic 45.0%
GAGAAGTGAATGTTGCTGAG+TGG + chr7_1:74936511-74936530 None:intergenic 45.0%
! CCAAGAAGCTGACTCCAATT+TGG + chr7_1:74936725-74936744 None:intergenic 45.0%
CCAAATTGGAGTCAGCTTCT+TGG - chr7_1:74936722-74936741 Msa1038140:intron 45.0%
GGATTGTTCTTGTTCGAGTC+AGG + chr7_1:74936805-74936824 None:intergenic 45.0%
GCTGGGAGGTAAGTAAAGTT+TGG + chr7_1:74936832-74936851 None:intergenic 45.0%
TCTTAAACCTCCAGCTCCTA+AGG + chr7_1:74936877-74936896 None:intergenic 45.0%
TTCATTCCCTATTCCCCTTG+CGG - chr7_1:74937055-74937074 Msa1038140:intron 45.0%
ATACTGTTAACAGCCGCAAG+GGG + chr7_1:74937071-74937090 None:intergenic 45.0%
ATCGCCTGCATCAGAAAAGT+AGG + chr7_1:74937096-74937115 None:intergenic 45.0%
CATGAGAGAAGGTCAAACGA+AGG + chr7_1:74937312-74937331 None:intergenic 45.0%
TCCATATATGTACCTGGAGG+TGG + chr7_1:74937440-74937459 None:intergenic 45.0%
! ATAAAGAGAGGGAGAGTGTG+AGG - chr7_1:74937905-74937924 Msa1038140:intron 45.0%
! GCGACTGGATTTCAGTTTTG+TGG + chr7_1:74938722-74938741 None:intergenic 45.0%
!! AGATGGACTGTCACCTAACT+TGG + chr7_1:74938894-74938913 None:intergenic 45.0%
GAATGGAGAACCAACATCAG+AGG - chr7_1:74938953-74938972 Msa1038140:intron 45.0%
TATACTTCCGCCTCTGATGT+TGG + chr7_1:74938966-74938985 None:intergenic 45.0%
! TGACGGATGCTGCAAATCAT+AGG + chr7_1:74938997-74939016 None:intergenic 45.0%
CGTGCATCATTTATGGGCAA+TGG + chr7_1:74939074-74939093 None:intergenic 45.0%
AATGATGCACGACAGATCCT+TGG - chr7_1:74939083-74939102 Msa1038140:CDS 45.0%
! TGAAGCATTACGGTTGCAGA+TGG - chr7_1:74940899-74940918 Msa1038140:intron 45.0%
GCGACTTCATGAACAACTTG+AGG - chr7_1:74940932-74940951 Msa1038140:intron 45.0%
TGCCAAAACTTGGAAGTTCC+GGG + chr7_1:74940977-74940996 None:intergenic 45.0%
GAAACAGATCGGTGACAACA+AGG - chr7_1:74941091-74941110 Msa1038140:intron 45.0%
AAGGTGCATTTGAAGGGGAA+GGG + chr7_1:74941118-74941137 None:intergenic 45.0%
! AGCAGAAGGTGCATTTGAAG+GGG + chr7_1:74941123-74941142 None:intergenic 45.0%
! CAGCAGAAGGTGCATTTGAA+GGG + chr7_1:74941124-74941143 None:intergenic 45.0%
CTTTCTCCGGGTATGTCTTT+AGG + chr7_1:74941239-74941258 None:intergenic 45.0%
ACATCATGGGAACTTTCTCC+GGG + chr7_1:74941251-74941270 None:intergenic 45.0%
! TGAATCTTCGCCCGTTTTGT+TGG + chr7_1:74941353-74941372 None:intergenic 45.0%
! TTTTTCTGACAGCCTGCTTG+TGG - chr7_1:74941606-74941625 Msa1038140:five_prime_UTR 45.0%
! TTTTCTGACAGCCTGCTTGT+GGG - chr7_1:74941607-74941626 Msa1038140:five_prime_UTR 45.0%
GTAAAACGAAACCCACAAGC+AGG + chr7_1:74941621-74941640 None:intergenic 45.0%
!! ACAAAAAAAAAAAAAAAAAA+AGG + chr7_1:74937659-74937678 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG - chr7_1:74937658-74937677 Msa1038140:intron 5.0%
CTACGCTACTTATCTTGCGG+CGG + chr7_1:74934625-74934644 None:intergenic 50.0%
GGACTCTGCCAACAAGAAGA+AGG - chr7_1:74934738-74934757 Msa1038140:three_prime_UTR 50.0%
AGGTGAAGACGAAGAAGGCA+TGG + chr7_1:74936228-74936247 None:intergenic 50.0%
! GATGTAGCTTGCAATGAGGC+AGG + chr7_1:74936335-74936354 None:intergenic 50.0%
GCTGTGAAACGGGAGGAAAA+GGG + chr7_1:74936421-74936440 None:intergenic 50.0%
TGCTGTGAAACGGGAGGAAA+AGG + chr7_1:74936422-74936441 None:intergenic 50.0%
CTATCATGCTGTGAAACGGG+AGG + chr7_1:74936428-74936447 None:intergenic 50.0%
CTCCCGTTTCACAGCATGAT+AGG - chr7_1:74936426-74936445 Msa1038140:intron 50.0%
AGATTCTCCCTTCGCTTCTC+AGG - chr7_1:74936457-74936476 Msa1038140:intron 50.0%
CCTAATGCCTGAGAAGCGAA+GGG + chr7_1:74936467-74936486 None:intergenic 50.0%
ACCTAATGCCTGAGAAGCGA+AGG + chr7_1:74936468-74936487 None:intergenic 50.0%
! TGTTTTCCACCCGATCATGC+TGG + chr7_1:74936613-74936632 None:intergenic 50.0%
CAAATGGGCCCTAGTGAGTT+CGG + chr7_1:74936854-74936873 None:intergenic 50.0%
CTCCAGCTCCTAAGGCAAAT+GGG + chr7_1:74936869-74936888 None:intergenic 50.0%
TAACAGCCGCAAGGGGAATA+GGG + chr7_1:74937064-74937083 None:intergenic 50.0%
TTAACAGCCGCAAGGGGAAT+AGG + chr7_1:74937065-74937084 None:intergenic 50.0%
! TTTTCTGATGCAGGCGATGC+AGG - chr7_1:74937098-74937117 Msa1038140:intron 50.0%
CAGAAGCAGCATACACCATC+TGG - chr7_1:74937126-74937145 Msa1038140:intron 50.0%
GTTGATGCTGATGCTGAAGC+TGG + chr7_1:74937174-74937193 None:intergenic 50.0%
TCTGGACTCCAACGCATTCT+AGG + chr7_1:74937213-74937232 None:intergenic 50.0%
TACTCTCACTACCACCAAGC+TGG + chr7_1:74937266-74937285 None:intergenic 50.0%
CATGCAGAGGCTACTCCAAA+AGG - chr7_1:74937363-74937382 Msa1038140:intron 50.0%
! CCTGGAGGTGGCTTTTTACA+TGG + chr7_1:74937428-74937447 None:intergenic 50.0%
CCATGTAAAAAGCCACCTCC+AGG - chr7_1:74937425-74937444 Msa1038140:intron 50.0%
GCCACCTCCAGGTACATATA+TGG - chr7_1:74937436-74937455 Msa1038140:intron 50.0%
TGGAGAACCAACATCAGAGG+CGG - chr7_1:74938956-74938975 Msa1038140:intron 50.0%
! CACCCGGAACTTCCAAGTTT+TGG - chr7_1:74940972-74940991 Msa1038140:intron 50.0%
! GAAGGTGCATTTGAAGGGGA+AGG + chr7_1:74941119-74941138 None:intergenic 50.0%
! GCAGCAGAAGGTGCATTTGA+AGG + chr7_1:74941125-74941144 None:intergenic 50.0%
TTATCCACCGGAGAAGAAGG+TGG + chr7_1:74941164-74941183 None:intergenic 50.0%
CTGACGTGCCTCCAACAAAA+CGG - chr7_1:74941339-74941358 Msa1038140:five_prime_UTR 50.0%
TGACGTGCCTCCAACAAAAC+GGG - chr7_1:74941340-74941359 Msa1038140:five_prime_UTR 50.0%
!! ATCTTCGCCCGTTTTGTTGG+AGG + chr7_1:74941350-74941369 None:intergenic 50.0%
CGCCGCAAGATAAGTAGCGT+AGG - chr7_1:74934623-74934642 Msa1038140:three_prime_UTR 55.0%
! TTTGCTGTCAGACCCCTGAC+AGG + chr7_1:74936311-74936330 None:intergenic 55.0%
CCCTTCGCTTCTCAGGCATT+AGG - chr7_1:74936464-74936483 Msa1038140:intron 55.0%
TTCTGTCCAGCATGATCGGG+TGG - chr7_1:74936604-74936623 Msa1038140:intron 55.0%
CACTAGGGCCCATTTGCCTT+AGG - chr7_1:74936858-74936877 Msa1038140:intron 55.0%
CCTCCAGCTCCTAAGGCAAA+TGG + chr7_1:74936870-74936889 None:intergenic 55.0%
CCATTTGCCTTAGGAGCTGG+AGG - chr7_1:74936867-74936886 Msa1038140:intron 55.0%
ACATGCAGTCCTCCTCACCT+AGG - chr7_1:74936915-74936934 Msa1038140:intron 55.0%
GTGGAAGCAGTCAACCAGCT+TGG - chr7_1:74937249-74937268 Msa1038140:intron 55.0%
GAAGCAGTCAACCAGCTTGG+TGG - chr7_1:74937252-74937271 Msa1038140:intron 55.0%
ATCGACATACACGCCGGTGA+CGG + chr7_1:74937495-74937514 None:intergenic 55.0%
TGCACCTTCTGCTGCAGTGT+TGG - chr7_1:74941130-74941149 Msa1038140:intron 55.0%
GTGTCCAACACTGCAGCAGA+AGG + chr7_1:74941137-74941156 None:intergenic 55.0%
ACCTCCCAGCCGAACTCACT+AGG - chr7_1:74936842-74936861 Msa1038140:intron 60.0%
CCTCCCAGCCGAACTCACTA+GGG - chr7_1:74936843-74936862 Msa1038140:intron 60.0%
GGCCCATTTGCCTTAGGAGC+TGG - chr7_1:74936864-74936883 Msa1038140:intron 60.0%
!! GAGCTTGTTGGTGCCGTCAC+CGG - chr7_1:74937479-74937498 Msa1038140:intron 60.0%
CACGACGCCACCTTCTTCTC+CGG - chr7_1:74941154-74941173 Msa1038140:intron 60.0%
CCCTAGTGAGTTCGGCTGGG+AGG + chr7_1:74936846-74936865 None:intergenic 65.0%
GGGCCCTAGTGAGTTCGGCT+GGG + chr7_1:74936849-74936868 None:intergenic 65.0%
TGGGCCCTAGTGAGTTCGGC+TGG + chr7_1:74936850-74936869 None:intergenic 65.0%
! TTGATGACCCGTGCGCCGCA+CGG - chr7_1:74937767-74937786 Msa1038140:intron 65.0%
TAAAGGACCCGTGCGGCGCA+CGG + chr7_1:74937778-74937797 None:intergenic 65.0%
GACGCCACCTTCTTCTCCGG+TGG - chr7_1:74941157-74941176 Msa1038140:intron 65.0%
GGAGGAAAAGGGACGCCGCC+AGG + chr7_1:74936410-74936429 None:intergenic 70.0%
TGATGACCCGTGCGCCGCAC+GGG - chr7_1:74937768-74937787 Msa1038140:intron 70.0%
AAAGGACCCGTGCGGCGCAC+GGG + chr7_1:74937777-74937796 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 74934592 74941655 74934592 ID=Msa1038140;Name=Msa1038140
chr7_1 mRNA 74934592 74941655 74934592 ID=Msa1038140-mRNA-1;Parent=Msa1038140;Name=Msa1038140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=372|1|1|1|0.85|0.75|8|279|439
chr7_1 exon 74934592 74935224 74934592 ID=Msa1038140-mRNA-1:exon:19008;Parent=Msa1038140-mRNA-1
chr7_1 exon 74935294 74935363 74935294 ID=Msa1038140-mRNA-1:exon:19007;Parent=Msa1038140-mRNA-1
chr7_1 exon 74935456 74935513 74935456 ID=Msa1038140-mRNA-1:exon:19006;Parent=Msa1038140-mRNA-1
chr7_1 exon 74938645 74938684 74938645 ID=Msa1038140-mRNA-1:exon:19005;Parent=Msa1038140-mRNA-1
chr7_1 exon 74938801 74938877 74938801 ID=Msa1038140-mRNA-1:exon:19004;Parent=Msa1038140-mRNA-1
chr7_1 exon 74938965 74939136 74938965 ID=Msa1038140-mRNA-1:exon:19003;Parent=Msa1038140-mRNA-1
chr7_1 exon 74939472 74940056 74939472 ID=Msa1038140-mRNA-1:exon:19002;Parent=Msa1038140-mRNA-1
chr7_1 exon 74941320 74941655 74941320 ID=Msa1038140-mRNA-1:exon:19001;Parent=Msa1038140-mRNA-1
chr7_1 five_prime_UTR 74941320 74941655 74941320 ID=Msa1038140-mRNA-1:five_prime_utr;Parent=Msa1038140-mRNA-1
chr7_1 five_prime_UTR 74940021 74940056 74940021 ID=Msa1038140-mRNA-1:five_prime_utr;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74939472 74940020 74939472 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74938965 74939136 74938965 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74938801 74938877 74938801 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74938645 74938684 74938645 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74935456 74935513 74935456 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74935294 74935363 74935294 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 CDS 74934871 74935224 74934871 ID=Msa1038140-mRNA-1:cds;Parent=Msa1038140-mRNA-1
chr7_1 three_prime_UTR 74934592 74934870 74934592 ID=Msa1038140-mRNA-1:three_prime_utr;Parent=Msa1038140-mRNA-1
Gene Sequence

>Msa1038140

ATGCCTTCTTCGTCTTCACCTGTTCTTCCCAGTCTTATGGAAAGCAATTATATGAAACCCCCGGATTCTTTTCATCGTTCACCTGTCAGGGGTCTGACAGCAAATCCTGCCTCATTGCAAGCTACATCATCGTATCCGATCAGAAGTGTTCGACCTGTGTTTTCAATCAATGATGAACGTCCTGGCGGCGTCCCTTTTCCTCCCGTTTCACAGCATGATAGGCAATATCAAGATTCTCCCTTCGCTTCTCAGGCATTAGGTGACAATGTGTCTTCGGAAATCCACTCAGCAACATTCACTTCTCACCTTCAAGAAAATGATGATATATCGTGGGGACCAGATCCATTGCCAGATATTCTTGGTTTTCCTGAAATTTTTTCTGTCCAGCATGATCGGGTGGAAAACAGTGCTTGTTACATGAATGAAGACAATGTCAAAAAAACTGATTTTGGGGAGTGGGTTGAACAACTAATGACAAGTGATGATTCTGTTAATCCAAATTGGAGTCAGCTTCTTGGTGATGACAATGTTGTTGAACCAACACAACAGGCGATGCAGGTTTCTCAGAAGCAGCATACACCATCTGGAGAAGTCAACAATCTTTGTAATCCAGCTTCAGCATCAGCATCAACTGCATCTCAAACTAAGCCTAGAATGCGTTGGAGTCCAGAACTTCACGAAGCTTTTGTGGAAGCAGTCAACCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAAGGTGTCTTGAATCTAATGAATGTTGAGGGCCTTACCATCTACCATGTAAAAAGCCACCTCCAGAAGTATAGAACTGCCAGATACAAACCTGAATCACCAGAAGAAACTTCTGAGAAAAAGATGAGTTCAATTGAGGAAATGAAATCTCTGGACTTGAAAACGAGTAAGGGAATCACTGAAGCATTACGGTTGCAGATGGAACTTCAGAAGCGACTTCATGAACAACTTGAGATTCAAAGGAAGTTGCAGATTCAAATTGAAAACCAAGGGAAACATCTTGAGATGATGTTTGAGAAACAGAAACAGATCGGTGACAACAAGGGCCCTTCCCCTTCAAATGCACCTTCTGCTGCAGTGTTGGACACGACGCCACCTTCTTCTCCGGTGGATAATTTAAAAACTTCAAAAGATGAACGGGATAAATCAGGATGTAACGCTGACATTCCTAAAGACATACCCGGAGAAAGTTCCCATGATGTAAGCAGGAAGCAAATGGCAGATGAAGCTGAAGTTACCAATGAACATGAGAGGGTAGATGATCAGTTTTCTGACGTGCCTCCAACAAAACGGGCGAAGATTCAATGA
Protein sequence

>Msa1038140

MPSSSSPVLPSLMESNYMKPPDSFHRSPVRGLTANPASLQATSSYPIRSVRPVFSINDERPGGVPFPPVSQHDRQYQDSPFASQALGDNVSSEIHSATFTSHLQENDDISWGPDPLPDILGFPEIFSVQHDRVENSACYMNEDNVKKTDFGEWVEQLMTSDDSVNPNWSQLLGDDNVVEPTQQAMQVSQKQHTPSGEVNNLCNPASASASTASQTKPRMRWSPELHEAFVEAVNQLGGSEKATPKGVLNLMNVEGLTIYHVKSHLQKYRTARYKPESPEETSEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKHLEMMFEKQKQIGDNKGPSPSNAPSAAVLDTTPPSSPVDNLKTSKDERDKSGCNADIPKDIPGESSHDVSRKQMADEAEVTNEHERVDDQFSDVPPTKRAKIQ*