Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279220 | sp|Q9FKT0|ARP8_ARATH | 60.930 | 430 | 130 | 7 | 46 | 438 | 41 | 469 | 2.13e-173 | 497 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279220 | G7LJD4 | 82.158 | 482 | 41 | 4 | 1 | 442 | 1 | 477 | 0.0 | 765 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0051200 | Msa1279220 | 0.811915 | 5.511946e-51 | -8.615850e-47 |
| Msa0051460 | Msa1279220 | 0.804906 | 1.725091e-49 | -8.615850e-47 |
| Msa0094940 | Msa1279220 | -0.813151 | 2.959357e-51 | -8.615850e-47 |
| Msa0101840 | Msa1279220 | 0.813062 | 3.096091e-51 | -8.615850e-47 |
| Msa0143920 | Msa1279220 | 0.813129 | 2.992494e-51 | -8.615850e-47 |
| Msa0226620 | Msa1279220 | -0.810982 | 8.793225e-51 | -8.615850e-47 |
| Msa1279220 | Msa1328690 | 0.804899 | 1.730851e-49 | -8.615850e-47 |
| Msa1279220 | Msa1377070 | 0.811778 | 5.906507e-51 | -8.615850e-47 |
| Msa0438050 | Msa1279220 | 0.801727 | 7.855171e-49 | -8.615850e-47 |
| Msa1038140 | Msa1279220 | 0.803264 | 3.788287e-49 | -8.615850e-47 |
| Msa0260270 | Msa1279220 | -0.814917 | 1.206736e-51 | -8.615850e-47 |
| Msa0304270 | Msa1279220 | -0.820047 | 8.429925e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279220 | MtrunA17_Chr8g0369101 | 82.158 | 482 | 41 | 4 | 1 | 442 | 1 | 477 | 0.0 | 765 |
| Msa1279220 | MtrunA17_Chr3g0080021 | 59.792 | 480 | 146 | 10 | 1 | 442 | 1 | 471 | 0.0 | 540 |
| Msa1279220 | MtrunA17_Chr2g0278591 | 31.353 | 303 | 174 | 11 | 144 | 434 | 86 | 366 | 1.50e-36 | 137 |
| Msa1279220 | MtrunA17_Chr7g0223901 | 30.565 | 301 | 179 | 11 | 144 | 434 | 86 | 366 | 2.29e-36 | 137 |
| Msa1279220 | MtrunA17_Chr3g0129641 | 31.229 | 301 | 177 | 11 | 144 | 434 | 86 | 366 | 3.51e-36 | 137 |
| Msa1279220 | MtrunA17_Chr6g0448881 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.62e-35 | 135 |
| Msa1279220 | MtrunA17_Chr2g0328091 | 29.900 | 301 | 181 | 11 | 144 | 434 | 86 | 366 | 8.52e-35 | 133 |
| Msa1279220 | MtrunA17_Chr1g0175391 | 30.233 | 301 | 180 | 11 | 144 | 434 | 86 | 366 | 1.28e-34 | 132 |
| Msa1279220 | MtrunA17_Chr7g0258721 | 30.363 | 303 | 177 | 11 | 144 | 434 | 86 | 366 | 1.45e-34 | 132 |
| Msa1279220 | MtrunA17_Chr7g0224401 | 26.730 | 318 | 183 | 14 | 145 | 436 | 86 | 379 | 4.13e-21 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279220 | AT5G56180.1 | 60.930 | 430 | 130 | 7 | 46 | 438 | 41 | 469 | 2.17e-174 | 497 |
| Msa1279220 | AT5G56180.3 | 74.570 | 291 | 72 | 2 | 150 | 438 | 47 | 337 | 1.10e-159 | 454 |
| Msa1279220 | AT5G56180.2 | 58.154 | 325 | 98 | 7 | 46 | 333 | 41 | 364 | 6.55e-112 | 335 |
| Msa1279220 | AT2G42090.1 | 29.000 | 300 | 185 | 10 | 144 | 434 | 75 | 355 | 4.05e-37 | 139 |
| Msa1279220 | AT5G09810.1 | 31.683 | 303 | 173 | 11 | 144 | 434 | 86 | 366 | 2.24e-36 | 137 |
| Msa1279220 | AT3G12110.1 | 30.233 | 301 | 180 | 11 | 144 | 434 | 86 | 366 | 9.56e-36 | 136 |
| Msa1279220 | AT2G42100.1 | 29.043 | 303 | 185 | 11 | 144 | 436 | 87 | 369 | 1.92e-35 | 135 |
| Msa1279220 | AT3G53750.1 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.29e-34 | 133 |
| Msa1279220 | AT3G53750.2 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.29e-34 | 133 |
| Msa1279220 | AT2G37620.1 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.29e-34 | 133 |
| Msa1279220 | AT2G37620.3 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.29e-34 | 133 |
| Msa1279220 | AT2G37620.2 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.29e-34 | 133 |
| Msa1279220 | AT2G37620.4 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 1.29e-34 | 133 |
| Msa1279220 | AT1G49240.1 | 29.085 | 306 | 177 | 12 | 144 | 434 | 86 | 366 | 4.07e-33 | 129 |
| Msa1279220 | AT3G18780.2 | 29.085 | 306 | 177 | 12 | 144 | 434 | 86 | 366 | 4.42e-33 | 129 |
| Msa1279220 | AT3G18780.3 | 29.085 | 306 | 177 | 12 | 144 | 434 | 86 | 366 | 4.42e-33 | 129 |
| Msa1279220 | AT3G46520.2 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 7.75e-33 | 128 |
| Msa1279220 | AT3G46520.1 | 29.568 | 301 | 182 | 11 | 144 | 434 | 86 | 366 | 7.75e-33 | 128 |
| Msa1279220 | AT2G42170.1 | 28.618 | 304 | 182 | 11 | 144 | 436 | 41 | 320 | 1.22e-32 | 126 |
| Msa1279220 | AT2G42170.3 | 28.618 | 304 | 182 | 11 | 144 | 436 | 41 | 320 | 1.22e-32 | 126 |
| Msa1279220 | AT5G59370.2 | 29.236 | 301 | 183 | 11 | 144 | 434 | 86 | 366 | 2.68e-32 | 126 |
| Msa1279220 | AT5G59370.1 | 29.236 | 301 | 183 | 11 | 144 | 434 | 86 | 366 | 2.68e-32 | 126 |
| Msa1279220 | AT3G18780.1 | 29.352 | 293 | 168 | 11 | 144 | 421 | 86 | 354 | 6.21e-32 | 125 |
| Msa1279220 | AT2G42170.4 | 28.720 | 289 | 172 | 10 | 144 | 421 | 41 | 306 | 1.96e-30 | 120 |
| Msa1279220 | AT2G42170.2 | 28.720 | 289 | 172 | 10 | 144 | 421 | 41 | 306 | 1.96e-30 | 120 |
| Msa1279220 | AT2G42170.5 | 30.222 | 225 | 136 | 7 | 222 | 436 | 9 | 222 | 3.77e-26 | 106 |
| Msa1279220 | AT3G27000.1 | 25.080 | 311 | 197 | 12 | 145 | 436 | 86 | 379 | 9.49e-21 | 94.0 |
| Msa1279220 | AT1G13180.1 | 23.667 | 300 | 188 | 12 | 171 | 434 | 117 | 411 | 9.56e-12 | 67.0 |
Find 122 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACTAAAGGAAGCAAATT+TGG | 0.172863 | 8_3:-16101553 | Msa1279220:three_prime_UTR |
| GGTTCTGGATATTGCAAATT+TGG | 0.188453 | 8_3:-16106549 | Msa1279220:CDS |
| GGTGTGGAGGTTGTTGGGCT+TGG | 0.218679 | 8_3:-16103425 | Msa1279220:CDS |
| TAATGTGTATTATTGGTTAT+TGG | 0.220714 | 8_3:-16101626 | Msa1279220:three_prime_UTR |
| AGAGTTACTAAGATTTAATT+AGG | 0.223499 | 8_3:+16107312 | None:intergenic |
| CAGAGCTTGGCAGCATGTTT+AGG | 0.229438 | 8_3:+16107069 | None:intergenic |
| GACTCAGTAATGTGTATTAT+TGG | 0.233729 | 8_3:-16101633 | Msa1279220:three_prime_UTR |
| CTGATTCCATTTGACATATA+AGG | 0.264725 | 8_3:+16102255 | None:intergenic |
| TGTTATTGTGTAGGTGGTTC+TGG | 0.267288 | 8_3:-16106564 | Msa1279220:intron |
| TTGCTGATAAGAAGCCTTAT+AGG | 0.270240 | 8_3:-16101783 | Msa1279220:three_prime_UTR |
| TTCGGTTGAGTTTAGACTTC+TGG | 0.270240 | 8_3:+16101915 | None:intergenic |
| TGAGTTGAGTTGAATAATTA+TGG | 0.297833 | 8_3:-16107280 | Msa1279220:exon |
| TTATTCCAGCCACGTCTTGC+TGG | 0.298378 | 8_3:-16102985 | Msa1279220:CDS |
| AGCAATTAATCTTACCAAAA+AGG | 0.303580 | 8_3:+16106488 | None:intergenic |
| ATACAAACTGGATGCCTATA+AGG | 0.312487 | 8_3:+16101769 | None:intergenic |
| CTTGGAGCACTAAAACTTAC+AGG | 0.316873 | 8_3:-16103407 | Msa1279220:CDS |
| TTTGCTCAAATCACCATATT+CGG | 0.322966 | 8_3:+16101897 | None:intergenic |
| AGTCTAAACTCAACCGAATA+TGG | 0.325026 | 8_3:-16101910 | Msa1279220:CDS |
| TATGCTGCAAATCAAACTTC+TGG | 0.329129 | 8_3:-16104312 | Msa1279220:CDS |
| AGAGCTTGGCAGCATGTTTA+GGG | 0.337411 | 8_3:+16107070 | None:intergenic |
| AAGCTGCTGTCTTGATGCTT+TGG | 0.341077 | 8_3:+16104865 | None:intergenic |
| GTTTAGGACTGTTGTCTTAT+CGG | 0.346654 | 8_3:-16102469 | Msa1279220:CDS |
| CAAGTGGCAGTGATTGGTTT+AGG | 0.361848 | 8_3:-16102485 | Msa1279220:CDS |
| TCTGGAATAGCTGTTAATAT+AGG | 0.362153 | 8_3:-16104294 | Msa1279220:CDS |
| ACAACAACCGCTTGAGAACT+TGG | 0.367770 | 8_3:+16105894 | None:intergenic |
| TGGTTTGGTGCAAAGCTTAT+TGG | 0.372016 | 8_3:-16102198 | Msa1279220:CDS |
| ATCACACCATCATCATCCTT+TGG | 0.372810 | 8_3:-16107148 | Msa1279220:CDS |
| TCTTGATGCTTTGGCTGATT+CGG | 0.373600 | 8_3:+16104874 | None:intergenic |
| TCAGAAACTAATTTAACTTC+TGG | 0.375922 | 8_3:-16106946 | Msa1279220:CDS |
| AAACTAAAGGAAGCAAATTT+GGG | 0.385998 | 8_3:-16101552 | Msa1279220:three_prime_UTR |
| AGAATAGAGTGAAAGTGTAT+AGG | 0.386087 | 8_3:+16106973 | None:intergenic |
| GGAGGAGGAGTTTGTGTTGG+TGG | 0.388870 | 8_3:+16107200 | None:intergenic |
| TCACACCATCATCATCCTTT+GGG | 0.395955 | 8_3:-16107147 | Msa1279220:CDS |
| ATAGTGGCGGTGGCGGGTAG+TGG | 0.397187 | 8_3:-16107363 | Msa1279220:five_prime_UTR |
| AGGTGGGTGTGGAGGTTGTT+GGG | 0.401970 | 8_3:-16103430 | Msa1279220:CDS |
| TATTCCAGCCACGTCTTGCT+GGG | 0.404356 | 8_3:-16102984 | Msa1279220:CDS |
| TTTAAAGCATTTGTTACTAA+AGG | 0.409661 | 8_3:+16101818 | None:intergenic |
| CTTCCACCTTATATGTCAAA+TGG | 0.419636 | 8_3:-16102261 | Msa1279220:CDS |
| TAACCATCATAGTGGCATAA+TGG | 0.420512 | 8_3:+16105864 | None:intergenic |
| GGAGGGTCTGCATGTTTACC+AGG | 0.423295 | 8_3:-16102447 | Msa1279220:CDS |
| AATTAGCAAGTGGCAGTGAT+TGG | 0.430589 | 8_3:-16102491 | Msa1279220:CDS |
| AAGGTGGGTGTGGAGGTTGT+TGG | 0.433202 | 8_3:-16103431 | Msa1279220:CDS |
| TTTAGGACTGTTGTCTTATC+GGG | 0.439760 | 8_3:-16102468 | Msa1279220:CDS |
| TCAAAGGAGCGGTTTCAAAC+AGG | 0.459948 | 8_3:-16103015 | Msa1279220:CDS |
| CTGGATATTGCAAATTTGGA+TGG | 0.460239 | 8_3:-16106545 | Msa1279220:CDS |
| TTGCTTCTTTGTTATGCACC+AGG | 0.461581 | 8_3:+16101943 | None:intergenic |
| CACCGTTCGCACACTGAAAG+AGG | 0.470195 | 8_3:-16103333 | Msa1279220:intron |
| GGAGGAGTTTGTGTTGGTGG+TGG | 0.472738 | 8_3:+16107203 | None:intergenic |
| TGCTGTTTGTGCTCTCAACC+AGG | 0.473178 | 8_3:-16104801 | Msa1279220:intron |
| TAGCTCAGCTTCATAGTCAT+AGG | 0.474195 | 8_3:+16103089 | None:intergenic |
| TTGTCTCAGATAACGAACTC+TGG | 0.475910 | 8_3:-16107020 | Msa1279220:CDS |
| GCATCATTTGAAGCCGTTGA+AGG | 0.476455 | 8_3:-16103051 | Msa1279220:CDS |
| TTGCCATTATGCCACTATGA+TGG | 0.486558 | 8_3:-16105867 | Msa1279220:intron |
| AAGATTGATGGAGAAACTAA+AGG | 0.487172 | 8_3:-16101565 | Msa1279220:three_prime_UTR |
| GCATGTTTACCAGGGTTAGC+AGG | 0.487442 | 8_3:-16102438 | Msa1279220:intron |
| AGCAAAGAGGATCGTCCATT+GGG | 0.490700 | 8_3:-16106522 | Msa1279220:CDS |
| GTATCTGCACCGTGTGGAGG+AGG | 0.492978 | 8_3:+16102225 | None:intergenic |
| GGGACAAATAGTGGCGGTGG+CGG | 0.494229 | 8_3:-16107370 | None:intergenic |
| GGACAAATAGTGGCGGTGGC+GGG | 0.496834 | 8_3:-16107369 | None:intergenic |
| TAGCAATTGAGTTGTGGAAA+GGG | 0.501331 | 8_3:-16106018 | Msa1279220:CDS |
| CTTGCAAACGAGGCAGAGCT+TGG | 0.504551 | 8_3:+16107056 | None:intergenic |
| CCATGCCATAGCTCTCTGTA+TGG | 0.504884 | 8_3:-16102532 | Msa1279220:CDS |
| TGCTTCTTTGTTATGCACCA+GGG | 0.505611 | 8_3:+16101944 | None:intergenic |
| GGTGGCGGGTAGTGGGTCAA+TGG | 0.506354 | 8_3:-16107355 | Msa1279220:five_prime_UTR |
| GAGCAAAGAGGATCGTCCAT+TGG | 0.508028 | 8_3:-16106523 | Msa1279220:CDS |
| TAGAGTGAAAGTGTATAGGC+TGG | 0.508039 | 8_3:+16106977 | None:intergenic |
| TAGTGGCGGTGGCGGGTAGT+GGG | 0.513418 | 8_3:-16107362 | Msa1279220:five_prime_UTR |
| CCAGTTTGTATAGAATGAAA+AGG | 0.521043 | 8_3:-16101757 | Msa1279220:three_prime_UTR |
| TTTATGATTACTTACGGAAG+AGG | 0.522747 | 8_3:+16106919 | None:intergenic |
| GTTGGAGGAGGAGTTTGTGT+TGG | 0.527955 | 8_3:+16107197 | None:intergenic |
| TTATGATTACTTACGGAAGA+GGG | 0.538894 | 8_3:+16106920 | None:intergenic |
| CATCATTTGAAGCCGTTGAA+GGG | 0.539680 | 8_3:-16103050 | Msa1279220:CDS |
| GAGTGTAAACTTCCCTTCAA+CGG | 0.540008 | 8_3:+16103038 | None:intergenic |
| TCTGCCTCGTTTGCAAGTCA+TGG | 0.542459 | 8_3:-16107050 | Msa1279220:CDS |
| TCTGATAATACATCAGCTTG+TGG | 0.545675 | 8_3:+16101666 | None:intergenic |
| TTGTTGTTTCTGCAGGATGA+AGG | 0.547264 | 8_3:-16105922 | Msa1279220:intron |
| ATAAACCCAAAGGATGATGA+TGG | 0.554666 | 8_3:+16107142 | None:intergenic |
| TGATGATGATGAAGAGTTGG+AGG | 0.556195 | 8_3:+16107182 | None:intergenic |
| GGACTGTTGTCTTATCGGGA+GGG | 0.556421 | 8_3:-16102464 | Msa1279220:CDS |
| AGTGATGCGAAAGGTGGGTG+TGG | 0.556753 | 8_3:-16103441 | Msa1279220:CDS |
| AAGGTAGCAATTCGTCCCAA+TGG | 0.561399 | 8_3:+16106507 | None:intergenic |
| TACCTCTTTCAGTGTGCGAA+CGG | 0.567021 | 8_3:+16103331 | None:intergenic |
| GGTGCAGATACTGCATGGTT+TGG | 0.569726 | 8_3:-16102213 | Msa1279220:CDS |
| ATTCCATTTGACATATAAGG+TGG | 0.570415 | 8_3:+16102258 | None:intergenic |
| TGTCTCAGATAACGAACTCT+GGG | 0.570990 | 8_3:-16107019 | Msa1279220:CDS |
| AGGACTGTTGTCTTATCGGG+AGG | 0.571888 | 8_3:-16102465 | Msa1279220:CDS |
| AGGGAAGTTTACACTCTCAA+AGG | 0.574977 | 8_3:-16103031 | Msa1279220:CDS |
| ACATTAACTAACCATCATAG+TGG | 0.584951 | 8_3:+16105856 | None:intergenic |
| TGGTAAAGTGATGCGAAAGG+TGG | 0.585736 | 8_3:-16103447 | Msa1279220:CDS |
| ATTGGGACAAATAGTGGCGG+TGG | 0.586398 | 8_3:-16107373 | None:intergenic |
| TGGTTGAGAGCACAAACAGC+AGG | 0.587707 | 8_3:+16104803 | None:intergenic |
| TGATGATGAAGAGTTGGAGG+AGG | 0.589586 | 8_3:+16107185 | None:intergenic |
| GTAGCAATTGAGTTGTGGAA+AGG | 0.593724 | 8_3:-16106019 | Msa1279220:CDS |
| ATTCCAGCCACGTCTTGCTG+GGG | 0.595400 | 8_3:-16102983 | Msa1279220:CDS |
| GCAGTATCTGCACCGTGTGG+AGG | 0.600623 | 8_3:+16102222 | None:intergenic |
| CAAATTTGGATGGAGCAAAG+AGG | 0.606757 | 8_3:-16106535 | Msa1279220:CDS |
| CTAATTCTGCAGAATGACAA+TGG | 0.607049 | 8_3:+16102508 | None:intergenic |
| TACTTCAGAGAGGTTAGAGA+AGG | 0.607073 | 8_3:-16102298 | Msa1279220:intron |
| ATGGTCCATACAGAGAGCTA+TGG | 0.609311 | 8_3:+16102527 | None:intergenic |
| AAATGGTAAAGTGATGCGAA+AGG | 0.611089 | 8_3:-16103450 | Msa1279220:CDS |
| AATAATACACATTACTGAGT+CGG | 0.612263 | 8_3:+16101635 | None:intergenic |
| TATCTGCACCGTGTGGAGGA+GGG | 0.612373 | 8_3:+16102226 | None:intergenic |
| GGTAAAGTGATGCGAAAGGT+GGG | 0.612613 | 8_3:-16103446 | Msa1279220:CDS |
| CATTCTGCAGAATTAGCAAG+TGG | 0.616376 | 8_3:-16102501 | Msa1279220:CDS |
| GCTTCTTTGTTATGCACCAG+GGG | 0.622461 | 8_3:+16101945 | None:intergenic |
| ATACAGTAGCAATTGAGTTG+TGG | 0.623526 | 8_3:-16106024 | Msa1279220:intron |
| ATCGCCATGACTTGCAAACG+AGG | 0.623836 | 8_3:+16107046 | None:intergenic |
| CACACGGTGCAGATACTGCA+TGG | 0.632974 | 8_3:-16102218 | Msa1279220:CDS |
| GGAAGTTTACCTGCTAACCC+TGG | 0.636739 | 8_3:+16102429 | None:intergenic |
| GATGCGAAAGGTGGGTGTGG+AGG | 0.643554 | 8_3:-16103438 | Msa1279220:CDS |
| CCATACAGAGAGCTATGGCA+TGG | 0.645435 | 8_3:+16102532 | None:intergenic |
| GGTTGAGTTTAGACTTCTGG+CGG | 0.646309 | 8_3:+16101918 | None:intergenic |
| GAGGGTCTGCATGTTTACCA+GGG | 0.648864 | 8_3:-16102446 | Msa1279220:CDS |
| CTTCTTTGTTATGCACCAGG+GGG | 0.651797 | 8_3:+16101946 | None:intergenic |
| GGTGAAACCAAGTTCTCAAG+CGG | 0.653510 | 8_3:-16105901 | Msa1279220:CDS |
| GTACTAACACATTATTAACA+TGG | 0.654050 | 8_3:+16101704 | None:intergenic |
| AGTGAGTCAAATAAACCCAA+AGG | 0.667000 | 8_3:+16107132 | None:intergenic |
| ACTTACACCCCAGCAAGACG+TGG | 0.667174 | 8_3:+16102976 | None:intergenic |
| AGTTTACACTCTCAAAGGAG+CGG | 0.669684 | 8_3:-16103026 | Msa1279220:CDS |
| AGAGTCATCCCTCCTCCACA+CGG | 0.670384 | 8_3:-16102234 | Msa1279220:CDS |
| CATGCAGTATCTGCACCGTG+TGG | 0.712978 | 8_3:+16102219 | None:intergenic |
| TGTATTGGGACAAATAGTGG+CGG | 0.722035 | 8_3:-16107376 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATCTTAATGATATAT+GGG | + | chr8_3:16106576-16106595 | None:intergenic | 10.0% |
| !! | TTAAAAATCTTAATGATATA+TGG | + | chr8_3:16106577-16106596 | None:intergenic | 10.0% |
| !!! | TGTTATTTATTTTGCTTTAA+TGG | - | chr8_3:16102579-16102598 | Msa1279220:intron | 15.0% |
| !!! | ATATTTATTAACATTGGTTA+AGG | + | chr8_3:16103393-16103412 | None:intergenic | 15.0% |
| !!! | TTGAATTTAAAGTTTGTATT+AGG | - | chr8_3:16103677-16103696 | Msa1279220:intron | 15.0% |
| !!! | TTTTAACTCACAATTTTTTT+TGG | - | chr8_3:16103746-16103765 | Msa1279220:intron | 15.0% |
| !! | ATAATTAGAAAAGACATAAA+TGG | - | chr8_3:16104254-16104273 | Msa1279220:intron | 15.0% |
| !!! | TAAATAATTTTAGGAGAATA+CGG | + | chr8_3:16104338-16104357 | None:intergenic | 15.0% |
| !!! | GATTTGAACTAAATAATTTT+AGG | + | chr8_3:16104347-16104366 | None:intergenic | 15.0% |
| !! | AAATTAGTTACAAGATAAAT+AGG | + | chr8_3:16104933-16104952 | None:intergenic | 15.0% |
| !! | TTAAATAAATAAGCAATGTA+GGG | + | chr8_3:16105685-16105704 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTGTTGGAATA+AGG | - | chr8_3:16106123-16106142 | Msa1279220:intron | 15.0% |
| !! | GAAAATATAAACAAATACTA+TGG | + | chr8_3:16106310-16106329 | None:intergenic | 15.0% |
| !! | ATAACAAAATGTGATAAATA+TGG | + | chr8_3:16106342-16106361 | None:intergenic | 15.0% |
| !!! | TATTTATCACATTTTGTTAT+AGG | - | chr8_3:16106342-16106361 | Msa1279220:intron | 15.0% |
| !! | AGAGTTACTAAGATTTAATT+AGG | + | chr8_3:16101605-16101624 | None:intergenic | 20.0% |
| !!! | TGTTACTTTATGATTACTTA+CGG | + | chr8_3:16102004-16102023 | None:intergenic | 20.0% |
| !!! | ATTAACTTGTGTTGTTTAAT+TGG | - | chr8_3:16102031-16102050 | Msa1279220:intron | 20.0% |
| !! | TTACTTACTTAGTTTATGTT+TGG | - | chr8_3:16102186-16102205 | Msa1279220:intron | 20.0% |
| !! | AAAATTAAGAAGTTAGACAA+AGG | + | chr8_3:16102453-16102472 | None:intergenic | 20.0% |
| !!! | GTAATTGTGATTTTCAAATA+TGG | + | chr8_3:16103092-16103111 | None:intergenic | 20.0% |
| !!! | TATTTTGAAAGACCAATTTA+GGG | - | chr8_3:16103245-16103264 | Msa1279220:intron | 20.0% |
| !! | TTAACTCTTAAGAACTAATT+TGG | - | chr8_3:16103314-16103333 | Msa1279220:intron | 20.0% |
| !!! | TGAAATCTGAGTAATTTTTT+TGG | - | chr8_3:16103347-16103366 | Msa1279220:CDS | 20.0% |
| !!! | TTTCAATTTTACTGTTATGA+AGG | + | chr8_3:16103450-16103469 | None:intergenic | 20.0% |
| !!! | ATATGATTATTTGTGTTGTT+TGG | - | chr8_3:16103527-16103546 | Msa1279220:intron | 20.0% |
| !! | TATCATAGGTTAAAAGTTAA+GGG | + | chr8_3:16104173-16104192 | None:intergenic | 20.0% |
| !! | TTATCATAGGTTAAAAGTTA+AGG | + | chr8_3:16104174-16104193 | None:intergenic | 20.0% |
| !! | AACCTATGATAAATAAGATT+TGG | - | chr8_3:16104182-16104201 | Msa1279220:intron | 20.0% |
| !!! | ATCCAAATCTTATTTATCAT+AGG | + | chr8_3:16104187-16104206 | None:intergenic | 20.0% |
| !! | AAATTAAAGAACAAAGAGAA+TGG | + | chr8_3:16104232-16104251 | None:intergenic | 20.0% |
| !! | AGAAAATAGCAAATTTAGAA+AGG | - | chr8_3:16104426-16104445 | Msa1279220:intron | 20.0% |
| !! | AATCGAAAACAAATAAGTTA+AGG | + | chr8_3:16104546-16104565 | None:intergenic | 20.0% |
| !!! | TTTGTGAAATTTTGTAATGT+AGG | - | chr8_3:16104565-16104584 | Msa1279220:intron | 20.0% |
| !!! | TTTGTAATTTTGATTCGTTT+AGG | - | chr8_3:16105209-16105228 | Msa1279220:intron | 20.0% |
| !!! | TTGTAATTTTGATTCGTTTA+GGG | - | chr8_3:16105210-16105229 | Msa1279220:intron | 20.0% |
| !!! | TGTTGATTTACAGTTTTAAA+TGG | - | chr8_3:16105447-16105466 | Msa1279220:intron | 20.0% |
| !! | TAAATAAATAAGCAATGTAG+GGG | + | chr8_3:16105684-16105703 | None:intergenic | 20.0% |
| !! | CTTAAATAAATAAGCAATGT+AGG | + | chr8_3:16105686-16105705 | None:intergenic | 20.0% |
| !! | CTTAGAAAAAAGCAAATATT+GGG | + | chr8_3:16105736-16105755 | None:intergenic | 20.0% |
| !!! | AAACCATTTTCAATAATTAG+TGG | - | chr8_3:16106098-16106117 | Msa1279220:intron | 20.0% |
| !!! | AAAGTTGTAGAGTTTAAAAT+TGG | + | chr8_3:16106157-16106176 | None:intergenic | 20.0% |
| !! | ATATAAATACTGTATGGTTT+AGG | + | chr8_3:16106226-16106245 | None:intergenic | 20.0% |
| !! | CATATCATATAAATACTGTA+TGG | + | chr8_3:16106232-16106251 | None:intergenic | 20.0% |
| !! | CATACAGTATTTATATGATA+TGG | - | chr8_3:16106230-16106249 | Msa1279220:intron | 20.0% |
| !! | ATAAACAAATACTATGGAAT+GGG | + | chr8_3:16106304-16106323 | None:intergenic | 20.0% |
| !! | TATAAACAAATACTATGGAA+TGG | + | chr8_3:16106305-16106324 | None:intergenic | 20.0% |
| !!! | GAAAAGTGTCAAAATAAAAA+GGG | + | chr8_3:16106509-16106528 | None:intergenic | 20.0% |
| !!! | TTTAAAGCATTTGTTACTAA+AGG | + | chr8_3:16107099-16107118 | None:intergenic | 20.0% |
| !!! | TAATGTGTATTATTGGTTAT+TGG | - | chr8_3:16107288-16107307 | Msa1279220:five_prime_UTR | 20.0% |
| !!! | AGTTTTTTTATATTCTCAGT+TGG | + | chr8_3:16107324-16107343 | None:intergenic | 20.0% |
| !! | AAAAACTAAGAAAAGATTGA+TGG | - | chr8_3:16107337-16107356 | Msa1279220:five_prime_UTR | 20.0% |
| !!! | TGAGTTGAGTTGAATAATTA+TGG | - | chr8_3:16101634-16101653 | Msa1279220:three_prime_UTR | 25.0% |
| !! | TCAGAAACTAATTTAACTTC+TGG | - | chr8_3:16101968-16101987 | Msa1279220:intron | 25.0% |
| ! | AAGTATCTAAATTACCACTA+TGG | + | chr8_3:16102244-16102263 | None:intergenic | 25.0% |
| !!! | TTGTTTGTTTGTTATTGTGT+AGG | - | chr8_3:16102341-16102360 | Msa1279220:intron | 25.0% |
| ! | AGCAATTAATCTTACCAAAA+AGG | + | chr8_3:16102429-16102448 | None:intergenic | 25.0% |
| ! | ATGATAAAATCAGTAACTTG+TGG | - | chr8_3:16102497-16102516 | Msa1279220:CDS | 25.0% |
| !!! | AATCCGTTTTTACACTAAAA+GGG | + | chr8_3:16102607-16102626 | None:intergenic | 25.0% |
| ! | TATGGTTAATGACTTCAATT+TGG | - | chr8_3:16102716-16102735 | Msa1279220:intron | 25.0% |
| ! | AAATTGTTTCATCAACAAGA+AGG | + | chr8_3:16102824-16102843 | None:intergenic | 25.0% |
| ! | TTCATATTTGCACAAATCAT+CGG | + | chr8_3:16102855-16102874 | None:intergenic | 25.0% |
| ! | AAATTCTATGTCTAATGGAA+AGG | - | chr8_3:16102961-16102980 | Msa1279220:intron | 25.0% |
| !! | TTGTGATTTTCAAATATGGA+GGG | + | chr8_3:16103088-16103107 | None:intergenic | 25.0% |
| !! | ATTGTGATTTTCAAATATGG+AGG | + | chr8_3:16103089-16103108 | None:intergenic | 25.0% |
| ! | ACTTGAGAAATTAGATCTTT+AGG | - | chr8_3:16103177-16103196 | Msa1279220:intron | 25.0% |
| ! | CTTGAGAAATTAGATCTTTA+GGG | - | chr8_3:16103178-16103197 | Msa1279220:intron | 25.0% |
| !! | TAATTTGGTGACAAATTCTT+TGG | - | chr8_3:16103203-16103222 | Msa1279220:intron | 25.0% |
| !! | AATTCTTTGGAGAAATAATG+CGG | - | chr8_3:16103216-16103235 | Msa1279220:intron | 25.0% |
| !!! | CTATTTTGAAAGACCAATTT+AGG | - | chr8_3:16103244-16103263 | Msa1279220:intron | 25.0% |
| !!! | ATTTTGAAAGACCAATTTAG+GGG | - | chr8_3:16103246-16103265 | Msa1279220:intron | 25.0% |
| ! | ACTGGGATATTTATTAACAT+TGG | + | chr8_3:16103399-16103418 | None:intergenic | 25.0% |
| !! | AGCATTTTCATTTATCAACT+GGG | + | chr8_3:16103416-16103435 | None:intergenic | 25.0% |
| !! | AAGCATTTTCATTTATCAAC+TGG | + | chr8_3:16103417-16103436 | None:intergenic | 25.0% |
| !!! | AGTTGATAAATGAAAATGCT+TGG | - | chr8_3:16103416-16103435 | Msa1279220:CDS | 25.0% |
| ! | TAAGTTTCAACTATAAGTCA+GGG | + | chr8_3:16103487-16103506 | None:intergenic | 25.0% |
| ! | ATAAGTTTCAACTATAAGTC+AGG | + | chr8_3:16103488-16103507 | None:intergenic | 25.0% |
| !!! | CTTCAAATACTTTTTGTAGA+AGG | + | chr8_3:16103908-16103927 | None:intergenic | 25.0% |
| !!! | CTTCTACAAAAAGTATTTGA+AGG | - | chr8_3:16103906-16103925 | Msa1279220:intron | 25.0% |
| ! | ATCATAGGTTAAAAGTTAAG+GGG | + | chr8_3:16104172-16104191 | None:intergenic | 25.0% |
| !! | GAAAAGACATAAATGGATTT+AGG | - | chr8_3:16104261-16104280 | Msa1279220:intron | 25.0% |
| ! | GCAAAATCATAAAACATACT+TGG | + | chr8_3:16104668-16104687 | None:intergenic | 25.0% |
| ! | TTCTGTTGAATACTGATATT+AGG | - | chr8_3:16104804-16104823 | Msa1279220:CDS | 25.0% |
| ! | TAGTTACAAGATAAATAGGA+GGG | + | chr8_3:16104929-16104948 | None:intergenic | 25.0% |
| ! | TTAGTTACAAGATAAATAGG+AGG | + | chr8_3:16104930-16104949 | None:intergenic | 25.0% |
| ! | ACAAACAAAATACACATTTG+AGG | + | chr8_3:16105087-16105106 | None:intergenic | 25.0% |
| !!! | ATAAACTCATTGATTCGTTT+AGG | + | chr8_3:16105383-16105402 | None:intergenic | 25.0% |
| ! | AATGCATATATGCTCAATAA+GGG | + | chr8_3:16105428-16105447 | None:intergenic | 25.0% |
| !!! | TTATATTTTTGATGCCACAA+AGG | - | chr8_3:16105636-16105655 | Msa1279220:intron | 25.0% |
| ! | GCTTAGAAAAAAGCAAATAT+TGG | + | chr8_3:16105737-16105756 | None:intergenic | 25.0% |
| ! | ATGCCACTAATTATTGAAAA+TGG | + | chr8_3:16106104-16106123 | None:intergenic | 25.0% |
| !!! | AGTGGCATTTTTTATATTGT+TGG | - | chr8_3:16106116-16106135 | Msa1279220:intron | 25.0% |
| !! | CAACTTTTGTAATATTCTTC+TGG | - | chr8_3:16106170-16106189 | Msa1279220:intron | 25.0% |
| ! | TAAACAAATACTATGGAATG+GGG | + | chr8_3:16106303-16106322 | None:intergenic | 25.0% |
| !!! | CGAAAAGTGTCAAAATAAAA+AGG | + | chr8_3:16106510-16106529 | None:intergenic | 25.0% |
| !! | AGTCAAATCGTTTTATACAA+AGG | + | chr8_3:16106835-16106854 | None:intergenic | 25.0% |
| ! | GTACTAACACATTATTAACA+TGG | + | chr8_3:16107213-16107232 | None:intergenic | 25.0% |
| ! | AATAATACACATTACTGAGT+CGG | + | chr8_3:16107282-16107301 | None:intergenic | 25.0% |
| ! | AAACTAAAGGAAGCAAATTT+GGG | - | chr8_3:16107362-16107381 | Msa1279220:five_prime_UTR | 25.0% |
| !! | TTTTAAGGAGTATATCAGGA+GGG | + | chr8_3:16101808-16101827 | None:intergenic | 30.0% |
| !! | ATTTTAAGGAGTATATCAGG+AGG | + | chr8_3:16101809-16101828 | None:intergenic | 30.0% |
| !! | GTGATTTTAAGGAGTATATC+AGG | + | chr8_3:16101812-16101831 | None:intergenic | 30.0% |
| ! | CTAATAGTCGTGTGATTTTA+AGG | + | chr8_3:16101823-16101842 | None:intergenic | 30.0% |
| ! | AGAATAGAGTGAAAGTGTAT+AGG | + | chr8_3:16101944-16101963 | None:intergenic | 30.0% |
| TTATGATTACTTACGGAAGA+GGG | + | chr8_3:16101997-16102016 | None:intergenic | 30.0% | |
| TTTATGATTACTTACGGAAG+AGG | + | chr8_3:16101998-16102017 | None:intergenic | 30.0% | |
| !!! | ATGTTGTTTTTAACTGCAGT+TGG | - | chr8_3:16102305-16102324 | Msa1279220:intron | 30.0% |
| !! | TTTGTTTGTTATTGTGTAGG+TGG | - | chr8_3:16102344-16102363 | Msa1279220:intron | 30.0% |
| ! | GTTCCCTTTTAGTGTAAAAA+CGG | - | chr8_3:16102601-16102620 | Msa1279220:intron | 30.0% |
| !! | GAATCCGTTTTTACACTAAA+AGG | + | chr8_3:16102608-16102627 | None:intergenic | 30.0% |
| !!! | GAGCTTTTTAGAGTAAAGTA+AGG | + | chr8_3:16102658-16102677 | None:intergenic | 30.0% |
| !! | ATGACTTCAATTTGGTAATG+TGG | - | chr8_3:16102724-16102743 | Msa1279220:intron | 30.0% |
| TGAGCAAATTCTATGTCTAA+TGG | - | chr8_3:16102956-16102975 | Msa1279220:intron | 30.0% | |
| ACATTAACTAACCATCATAG+TGG | + | chr8_3:16103061-16103080 | None:intergenic | 30.0% | |
| ! | TAGATCTTTAGGGACTAATT+TGG | - | chr8_3:16103188-16103207 | Msa1279220:intron | 30.0% |
| GTTCTTAAGAGTTAAGAAGA+AGG | + | chr8_3:16103309-16103328 | None:intergenic | 30.0% | |
| ! | GTAATTTGCACATCAATATG+TGG | + | chr8_3:16103565-16103584 | None:intergenic | 30.0% |
| !! | AAACTTTAGAGTCTAGACAA+TGG | + | chr8_3:16103825-16103844 | None:intergenic | 30.0% |
| GACAGTTTAATATGATTCAG+TGG | - | chr8_3:16103870-16103889 | Msa1279220:intron | 30.0% | |
| AGTTTAATATGATTCAGTGG+TGG | - | chr8_3:16103873-16103892 | Msa1279220:intron | 30.0% | |
| CATGTGTCAAAACTCAAAAT+CGG | + | chr8_3:16103940-16103959 | None:intergenic | 30.0% | |
| GATTAGTGAGCGTATAATTT+AGG | - | chr8_3:16104377-16104396 | Msa1279220:intron | 30.0% | |
| ! | TTTTGTAATGTAGGCAACTT+TGG | - | chr8_3:16104574-16104593 | Msa1279220:intron | 30.0% |
| ! | TCTGGAATAGCTGTTAATAT+AGG | - | chr8_3:16104620-16104639 | Msa1279220:intron | 30.0% |
| CAAGAGATATATTGTTAAGC+AGG | + | chr8_3:16104706-16104725 | None:intergenic | 30.0% | |
| CATGAAATACACCAATTGTT+AGG | - | chr8_3:16104726-16104745 | Msa1279220:intron | 30.0% | |
| ! | GTTTTCACATTCCTAACAAT+TGG | + | chr8_3:16104740-16104759 | None:intergenic | 30.0% |
| GGAATGTGAAAACATTGAAA+AGG | - | chr8_3:16104747-16104766 | Msa1279220:intron | 30.0% | |
| CTCAAAAGAGAAATTAGTTC+AGG | + | chr8_3:16104988-16105007 | None:intergenic | 30.0% | |
| !! | GTGTATTTTGTTTGTCAGTT+TGG | - | chr8_3:16105092-16105111 | Msa1279220:intron | 30.0% |
| ! | CAAATGTGTCTTTTGTTAGT+TGG | - | chr8_3:16105119-16105138 | Msa1279220:intron | 30.0% |
| ! | TGGTCTTTCATTTGTTAGTT+TGG | - | chr8_3:16105144-16105163 | Msa1279220:intron | 30.0% |
| ! | GTTAATGATAGGGTATTTCT+AGG | + | chr8_3:16105305-16105324 | None:intergenic | 30.0% |
| GATGCAGAATGTTAATGATA+GGG | + | chr8_3:16105315-16105334 | None:intergenic | 30.0% | |
| CTATCATTAACATTCTGCAT+CGG | - | chr8_3:16105314-16105333 | Msa1279220:intron | 30.0% | |
| TATCATTAACATTCTGCATC+GGG | - | chr8_3:16105315-16105334 | Msa1279220:intron | 30.0% | |
| ! | TCGTTTAGGTTATAACACAA+GGG | + | chr8_3:16105369-16105388 | None:intergenic | 30.0% |
| ! | TTCGTTTAGGTTATAACACA+AGG | + | chr8_3:16105370-16105389 | None:intergenic | 30.0% |
| ATGCATATATGCTCAATAAG+GGG | + | chr8_3:16105427-16105446 | None:intergenic | 30.0% | |
| CAATGCATATATGCTCAATA+AGG | + | chr8_3:16105429-16105448 | None:intergenic | 30.0% | |
| AAAAAAGCAAATATTGGGAC+TGG | + | chr8_3:16105731-16105750 | None:intergenic | 30.0% | |
| ! | TGGTTTGAAATCAGAAAGAA+CGG | + | chr8_3:16106084-16106103 | None:intergenic | 30.0% |
| ! | CTTTTGTAATATTCTTCTGG+AGG | - | chr8_3:16106173-16106192 | Msa1279220:intron | 30.0% |
| GTGATAAATATGGTTAAGCT+AGG | + | chr8_3:16106332-16106351 | None:intergenic | 30.0% | |
| !! | AAGATTTTTAACTCGACTCT+TGG | - | chr8_3:16106586-16106605 | Msa1279220:intron | 30.0% |
| !! | AGATTTTTAACTCGACTCTT+GGG | - | chr8_3:16106587-16106606 | Msa1279220:intron | 30.0% |
| ATTCCATTTGACATATAAGG+TGG | + | chr8_3:16106659-16106678 | None:intergenic | 30.0% | |
| CTGATTCCATTTGACATATA+AGG | + | chr8_3:16106662-16106681 | None:intergenic | 30.0% | |
| GTGAATGTTTAAGAGTTAAG+TGG | + | chr8_3:16106755-16106774 | None:intergenic | 30.0% | |
| ! | TTTTGTGTCCAGCTTATTTA+TGG | - | chr8_3:16106872-16106891 | Msa1279220:intron | 30.0% |
| TTTGCTCAAATCACCATATT+CGG | + | chr8_3:16107020-16107039 | None:intergenic | 30.0% | |
| ! | CCTTTTCATTCTATACAAAC+TGG | + | chr8_3:16107160-16107179 | None:intergenic | 30.0% |
| CCAGTTTGTATAGAATGAAA+AGG | - | chr8_3:16107157-16107176 | Msa1279220:CDS | 30.0% | |
| GACTCAGTAATGTGTATTAT+TGG | - | chr8_3:16107281-16107300 | Msa1279220:exon | 30.0% | |
| AAGATTGATGGAGAAACTAA+AGG | - | chr8_3:16107349-16107368 | Msa1279220:five_prime_UTR | 30.0% | |
| GAAACTAAAGGAAGCAAATT+TGG | - | chr8_3:16107361-16107380 | Msa1279220:five_prime_UTR | 30.0% | |
| ! | TGATGATGATGATGAAGAGT+TGG | + | chr8_3:16101738-16101757 | None:intergenic | 35.0% |
| ATAAACCCAAAGGATGATGA+TGG | + | chr8_3:16101775-16101794 | None:intergenic | 35.0% | |
| AGTGAGTCAAATAAACCCAA+AGG | + | chr8_3:16101785-16101804 | None:intergenic | 35.0% | |
| !!! | GTGTCGTTTAAGCATGTTTT+TGG | - | chr8_3:16102111-16102130 | Msa1279220:intron | 35.0% |
| !!! | TTAAGCATGTTTTTGGTCAC+CGG | - | chr8_3:16102118-16102137 | Msa1279220:intron | 35.0% |
| !! | GGTTCTGGATATTGCAAATT+TGG | - | chr8_3:16102365-16102384 | Msa1279220:intron | 35.0% |
| CTGGATATTGCAAATTTGGA+TGG | - | chr8_3:16102369-16102388 | Msa1279220:intron | 35.0% | |
| AAAAGCTCTTTCTTTGCAAG+TGG | - | chr8_3:16102670-16102689 | Msa1279220:intron | 35.0% | |
| ! | AAGCTATAGCTATGGTTCTA+TGG | - | chr8_3:16102698-16102717 | Msa1279220:intron | 35.0% |
| TGGAAACGCCAATATATACT+AGG | - | chr8_3:16102744-16102763 | Msa1279220:intron | 35.0% | |
| TGTCGAAGCCTAGTATATAT+TGG | + | chr8_3:16102755-16102774 | None:intergenic | 35.0% | |
| !!! | CATTTTTTCGCAACTGTCTA+TGG | - | chr8_3:16102773-16102792 | Msa1279220:intron | 35.0% |
| ! | ATACAGTAGCAATTGAGTTG+TGG | - | chr8_3:16102890-16102909 | Msa1279220:intron | 35.0% |
| ! | TAGCAATTGAGTTGTGGAAA+GGG | - | chr8_3:16102896-16102915 | Msa1279220:intron | 35.0% |
| TAACCATCATAGTGGCATAA+TGG | + | chr8_3:16103053-16103072 | None:intergenic | 35.0% | |
| TACCATGTATGTCCTTATGT+AGG | + | chr8_3:16103156-16103175 | None:intergenic | 35.0% | |
| !! | ATTTTAGTGAAGCCCATTGA+TGG | - | chr8_3:16103283-16103302 | Msa1279220:intron | 35.0% |
| TTAAGAAGAAGGCCATCAAT+GGG | + | chr8_3:16103298-16103317 | None:intergenic | 35.0% | |
| ! | TTTTTGGATGCATTTCCATG+TGG | - | chr8_3:16103363-16103382 | Msa1279220:CDS | 35.0% |
| CACATCAATATGTGGTTTCT+TGG | + | chr8_3:16103557-16103576 | None:intergenic | 35.0% | |
| ACTTGAAGAAGAAAACTGCA+TGG | + | chr8_3:16103594-16103613 | None:intergenic | 35.0% | |
| ! | GTTTTGCATACATGATCATC+AGG | - | chr8_3:16103841-16103860 | Msa1279220:intron | 35.0% |
| !!! | CGATTTTGAGTTTTGACACA+TGG | - | chr8_3:16103938-16103957 | Msa1279220:intron | 35.0% |
| !! | AACCAGGTAGCATATTTTAG+TGG | - | chr8_3:16104129-16104148 | Msa1279220:intron | 35.0% |
| !!! | ACCAGGTAGCATATTTTAGT+GGG | - | chr8_3:16104130-16104149 | Msa1279220:intron | 35.0% |
| TAAGATTTGGATCTGAGTGT+TGG | - | chr8_3:16104195-16104214 | Msa1279220:intron | 35.0% | |
| ! | ATACTCCTTAAAGAGGTACA+AGG | + | chr8_3:16104288-16104307 | None:intergenic | 35.0% |
| TGTGTTAAGGATCAAGATCA+GGG | + | chr8_3:16104312-16104331 | None:intergenic | 35.0% | |
| TATGCTGCAAATCAAACTTC+TGG | - | chr8_3:16104602-16104621 | Msa1279220:intron | 35.0% | |
| AGATAAATAGGAGGGTTCAA+GGG | + | chr8_3:16104921-16104940 | None:intergenic | 35.0% | |
| AAGATAAATAGGAGGGTTCA+AGG | + | chr8_3:16104922-16104941 | None:intergenic | 35.0% | |
| !! | GAGTAGTTAGCTTGTTAGTT+AGG | + | chr8_3:16104958-16104977 | None:intergenic | 35.0% |
| CACACTTTCAAGGAACAAAA+GGG | + | chr8_3:16105018-16105037 | None:intergenic | 35.0% | |
| TCACACTTTCAAGGAACAAA+AGG | + | chr8_3:16105019-16105038 | None:intergenic | 35.0% | |
| !! | TTTTGTTCCTTGAAAGTGTG+AGG | - | chr8_3:16105018-16105037 | Msa1279220:intron | 35.0% |
| ! | GTGTCTTTTGTTAGTTGGTT+TGG | - | chr8_3:16105124-16105143 | Msa1279220:intron | 35.0% |
| TGACATCTCATCACATGTTT+AGG | - | chr8_3:16105238-16105257 | Msa1279220:intron | 35.0% | |
| GACATCTCATCACATGTTTA+GGG | - | chr8_3:16105239-16105258 | Msa1279220:intron | 35.0% | |
| CGATGCAGAATGTTAATGAT+AGG | + | chr8_3:16105316-16105335 | None:intergenic | 35.0% | |
| ! | TTTAGGTTATAACACAAGGG+CGG | + | chr8_3:16105366-16105385 | None:intergenic | 35.0% |
| AAATGGTAAAGTGATGCGAA+AGG | - | chr8_3:16105464-16105483 | Msa1279220:intron | 35.0% | |
| !! | AAGCTGTGTTAAGTTGAATG+TGG | - | chr8_3:16105753-16105772 | Msa1279220:intron | 35.0% |
| ! | CTGTTTTCATGTAACCAACA+AGG | + | chr8_3:16105789-16105808 | None:intergenic | 35.0% |
| CTAATTCTGCAGAATGACAA+TGG | + | chr8_3:16106409-16106428 | None:intergenic | 35.0% | |
| ! | GTTTAGGACTGTTGTCTTAT+CGG | - | chr8_3:16106445-16106464 | Msa1279220:intron | 35.0% |
| ! | TTTAGGACTGTTGTCTTATC+GGG | - | chr8_3:16106446-16106465 | Msa1279220:intron | 35.0% |
| CTTCCACCTTATATGTCAAA+TGG | - | chr8_3:16106653-16106672 | Msa1279220:intron | 35.0% | |
| ! | TCACATTTTCCTTGCTTCAT+AGG | - | chr8_3:16106771-16106790 | Msa1279220:intron | 35.0% |
| TCATGTCACCATAAATAAGC+TGG | + | chr8_3:16106883-16106902 | None:intergenic | 35.0% | |
| AGTCTAAACTCAACCGAATA+TGG | - | chr8_3:16107004-16107023 | Msa1279220:CDS | 35.0% | |
| ! | TTGCTGATAAGAAGCCTTAT+AGG | - | chr8_3:16107131-16107150 | Msa1279220:CDS | 35.0% |
| ATACAAACTGGATGCCTATA+AGG | + | chr8_3:16107148-16107167 | None:intergenic | 35.0% | |
| TCTGATAATACATCAGCTTG+TGG | + | chr8_3:16107251-16107270 | None:intergenic | 35.0% | |
| ! | TGATGATGATGAAGAGTTGG+AGG | + | chr8_3:16101735-16101754 | None:intergenic | 40.0% |
| ATCACACCATCATCATCCTT+TGG | - | chr8_3:16101766-16101785 | Msa1279220:three_prime_UTR | 40.0% | |
| TCACACCATCATCATCCTTT+GGG | - | chr8_3:16101767-16101786 | Msa1279220:three_prime_UTR | 40.0% | |
| TTGTCTCAGATAACGAACTC+TGG | - | chr8_3:16101894-16101913 | Msa1279220:exon | 40.0% | |
| TGTCTCAGATAACGAACTCT+GGG | - | chr8_3:16101895-16101914 | Msa1279220:exon | 40.0% | |
| ! | TAGAGTGAAAGTGTATAGGC+TGG | + | chr8_3:16101940-16101959 | None:intergenic | 40.0% |
| !!! | TAAGCATGTTTTTGGTCACC+GGG | - | chr8_3:16102119-16102138 | Msa1279220:intron | 40.0% |
| TAACCGTCGATGATAACAGT+GGG | + | chr8_3:16102156-16102175 | None:intergenic | 40.0% | |
| AAAATTACCACGTGCCATAG+TGG | - | chr8_3:16102227-16102246 | Msa1279220:CDS | 40.0% | |
| TAAATTACCACTATGGCACG+TGG | + | chr8_3:16102237-16102256 | None:intergenic | 40.0% | |
| CAAACATTGTCGCACGAAAT+AGG | + | chr8_3:16102271-16102290 | None:intergenic | 40.0% | |
| CGACAATGTTTGTGCTTCAT+AGG | - | chr8_3:16102279-16102298 | Msa1279220:CDS | 40.0% | |
| TGTTATTGTGTAGGTGGTTC+TGG | - | chr8_3:16102350-16102369 | Msa1279220:intron | 40.0% | |
| CAAATTTGGATGGAGCAAAG+AGG | - | chr8_3:16102379-16102398 | Msa1279220:intron | 40.0% | |
| ! | GTAGCAATTGAGTTGTGGAA+AGG | - | chr8_3:16102895-16102914 | Msa1279220:intron | 40.0% |
| !! | TGAGTGATTGTTGTTTCTGC+AGG | - | chr8_3:16102985-16103004 | Msa1279220:CDS | 40.0% |
| !! | TTGTTGTTTCTGCAGGATGA+AGG | - | chr8_3:16102992-16103011 | Msa1279220:CDS | 40.0% |
| TTGCCATTATGCCACTATGA+TGG | - | chr8_3:16103047-16103066 | Msa1279220:CDS | 40.0% | |
| AAACCCTTCAGTCCTACATA+AGG | - | chr8_3:16103141-16103160 | Msa1279220:intron | 40.0% | |
| TGTCCTTATGTAGGACTGAA+GGG | + | chr8_3:16103147-16103166 | None:intergenic | 40.0% | |
| ATGTCCTTATGTAGGACTGA+AGG | + | chr8_3:16103148-16103167 | None:intergenic | 40.0% | |
| GTCCTACATAAGGACATACA+TGG | - | chr8_3:16103151-16103170 | Msa1279220:intron | 40.0% | |
| GACTGAGTAAACCCCTAAAT+TGG | + | chr8_3:16103260-16103279 | None:intergenic | 40.0% | |
| GTTAAGAAGAAGGCCATCAA+TGG | + | chr8_3:16103299-16103318 | None:intergenic | 40.0% | |
| ATTGGTTAAGGTTTGCCACA+TGG | + | chr8_3:16103381-16103400 | None:intergenic | 40.0% | |
| TATGTATGTGCCACATACGT+AGG | + | chr8_3:16103650-16103669 | None:intergenic | 40.0% | |
| GAAGGAAAGGGATCTCTAAA+TGG | + | chr8_3:16104011-16104030 | None:intergenic | 40.0% | |
| TCTTGATGCTTTGGCTGATT+CGG | + | chr8_3:16104043-16104062 | None:intergenic | 40.0% | |
| TCCCACTAAAATATGCTACC+TGG | + | chr8_3:16104134-16104153 | None:intergenic | 40.0% | |
| !! | TTGGATCTGAGTGTTGGATT+TGG | - | chr8_3:16104201-16104220 | Msa1279220:intron | 40.0% |
| !! | ATCTGAGTGTTGGATTTGGA+GGG | - | chr8_3:16104205-16104224 | Msa1279220:intron | 40.0% |
| TAGGTCCTTGTACCTCTTTA+AGG | - | chr8_3:16104280-16104299 | Msa1279220:CDS | 40.0% | |
| TCAGGGAATACTCCTTAAAG+AGG | + | chr8_3:16104295-16104314 | None:intergenic | 40.0% | |
| CTGTGTTAAGGATCAAGATC+AGG | + | chr8_3:16104313-16104332 | None:intergenic | 40.0% | |
| GAGAATACGGAACTGTGTTA+AGG | + | chr8_3:16104325-16104344 | None:intergenic | 40.0% | |
| AACATCACCTCACACTTTCA+AGG | + | chr8_3:16105028-16105047 | None:intergenic | 40.0% | |
| CATATATGCTCAATAAGGGG+AGG | + | chr8_3:16105424-16105443 | None:intergenic | 40.0% | |
| ! | CTTGGAGCACTAAAACTTAC+AGG | - | chr8_3:16105507-16105526 | Msa1279220:intron | 40.0% |
| !! | TTTGATGCCACAAAGGTACT+TGG | - | chr8_3:16105643-16105662 | Msa1279220:intron | 40.0% |
| !! | TTGATGCCACAAAGGTACTT+GGG | - | chr8_3:16105644-16105663 | Msa1279220:intron | 40.0% |
| ! | CATGTAACCAACAAGGTATC+AGG | + | chr8_3:16105782-16105801 | None:intergenic | 40.0% |
| TAGCTCAGCTTCATAGTCAT+AGG | + | chr8_3:16105828-16105847 | None:intergenic | 40.0% | |
| ! | CATCATTTGAAGCCGTTGAA+GGG | - | chr8_3:16105864-16105883 | Msa1279220:intron | 40.0% |
| GAGTGTAAACTTCCCTTCAA+CGG | + | chr8_3:16105879-16105898 | None:intergenic | 40.0% | |
| AGGGAAGTTTACACTCTCAA+AGG | - | chr8_3:16105883-16105902 | Msa1279220:CDS | 40.0% | |
| AGTTTACACTCTCAAAGGAG+CGG | - | chr8_3:16105888-16105907 | Msa1279220:CDS | 40.0% | |
| AACGGAAGTGAAAAGGTAAC+AGG | + | chr8_3:16106066-16106085 | None:intergenic | 40.0% | |
| CAGAAAGAACGGAAGTGAAA+AGG | + | chr8_3:16106073-16106092 | None:intergenic | 40.0% | |
| !! | TCTGGAGGCATTCAACTAAT+TGG | - | chr8_3:16106188-16106207 | Msa1279220:intron | 40.0% |
| CATTCTGCAGAATTAGCAAG+TGG | - | chr8_3:16106413-16106432 | Msa1279220:intron | 40.0% | |
| AATTAGCAAGTGGCAGTGAT+TGG | - | chr8_3:16106423-16106442 | Msa1279220:intron | 40.0% | |
| TATATGGGTAGTCTGTGTCA+TGG | + | chr8_3:16106561-16106580 | None:intergenic | 40.0% | |
| TGGGTTCATATACTTCAGAG+AGG | - | chr8_3:16106606-16106625 | Msa1279220:intron | 40.0% | |
| TACTTCAGAGAGGTTAGAGA+AGG | - | chr8_3:16106616-16106635 | Msa1279220:intron | 40.0% | |
| !! | TGGTTTGGTGCAAAGCTTAT+TGG | - | chr8_3:16106716-16106735 | Msa1279220:intron | 40.0% |
| AAGTGAAGTCCTATGAAGCA+AGG | + | chr8_3:16106783-16106802 | None:intergenic | 40.0% | |
| ACAAACAATCAGCTCTACAG+TGG | + | chr8_3:16106919-16106938 | None:intergenic | 40.0% | |
| ! | TGCTTCTTTGTTATGCACCA+GGG | + | chr8_3:16106973-16106992 | None:intergenic | 40.0% |
| ! | TTGCTTCTTTGTTATGCACC+AGG | + | chr8_3:16106974-16106993 | None:intergenic | 40.0% |
| TTCGGTTGAGTTTAGACTTC+TGG | + | chr8_3:16107002-16107021 | None:intergenic | 40.0% | |
| ! | TGATGATGAAGAGTTGGAGG+AGG | + | chr8_3:16101732-16101751 | None:intergenic | 45.0% |
| AGAGCTTGGCAGCATGTTTA+GGG | + | chr8_3:16101847-16101866 | None:intergenic | 45.0% | |
| ACATGCTTAAACGACACGTG+TGG | + | chr8_3:16102108-16102127 | None:intergenic | 45.0% | |
| CTAACCGTCGATGATAACAG+TGG | + | chr8_3:16102157-16102176 | None:intergenic | 45.0% | |
| AGCAAAGAGGATCGTCCATT+GGG | - | chr8_3:16102392-16102411 | Msa1279220:intron | 45.0% | |
| AAGGTAGCAATTCGTCCCAA+TGG | + | chr8_3:16102410-16102429 | None:intergenic | 45.0% | |
| ! | GGGACGAATTGCTACCTTTT+TGG | - | chr8_3:16102412-16102431 | Msa1279220:intron | 45.0% |
| TAAAGCACAGACATGGCATG+CGG | + | chr8_3:16102632-16102651 | None:intergenic | 45.0% | |
| AAGGCAGTAAAGCACAGACA+TGG | + | chr8_3:16102639-16102658 | None:intergenic | 45.0% | |
| TGGCAAGCAAGCTATAGCTA+TGG | - | chr8_3:16102690-16102709 | Msa1279220:intron | 45.0% | |
| ! | TTTTCGCAACTGTCTATGGC+AGG | - | chr8_3:16102777-16102796 | Msa1279220:intron | 45.0% |
| GGTGAAACCAAGTTCTCAAG+CGG | - | chr8_3:16103013-16103032 | Msa1279220:CDS | 45.0% | |
| ACAACAACCGCTTGAGAACT+TGG | + | chr8_3:16103023-16103042 | None:intergenic | 45.0% | |
| ACTATAAGTCAGGGACTGCA+TGG | + | chr8_3:16103478-16103497 | None:intergenic | 45.0% | |
| AAGCTGCTGTCTTGATGCTT+TGG | + | chr8_3:16104052-16104071 | None:intergenic | 45.0% | |
| !! | GATCTGAGTGTTGGATTTGG+AGG | - | chr8_3:16104204-16104223 | Msa1279220:intron | 45.0% |
| TGGTAAAGTGATGCGAAAGG+TGG | - | chr8_3:16105467-16105486 | Msa1279220:intron | 45.0% | |
| GGTAAAGTGATGCGAAAGGT+GGG | - | chr8_3:16105468-16105487 | Msa1279220:intron | 45.0% | |
| TACCTCTTTCAGTGTGCGAA+CGG | + | chr8_3:16105586-16105605 | None:intergenic | 45.0% | |
| ! | GCATCATTTGAAGCCGTTGA+AGG | - | chr8_3:16105863-16105882 | Msa1279220:intron | 45.0% |
| TCAAAGGAGCGGTTTCAAAC+AGG | - | chr8_3:16105899-16105918 | Msa1279220:CDS | 45.0% | |
| CAAGCAAAGCTGCTAAAGAG+TGG | + | chr8_3:16106030-16106049 | None:intergenic | 45.0% | |
| ATGGTCCATACAGAGAGCTA+TGG | + | chr8_3:16106390-16106409 | None:intergenic | 45.0% | |
| !! | CAAGTGGCAGTGATTGGTTT+AGG | - | chr8_3:16106429-16106448 | Msa1279220:intron | 45.0% |
| ! | CTTCTTTGTTATGCACCAGG+GGG | + | chr8_3:16106971-16106990 | None:intergenic | 45.0% |
| ! | GCTTCTTTGTTATGCACCAG+GGG | + | chr8_3:16106972-16106991 | None:intergenic | 45.0% |
| GGTTGAGTTTAGACTTCTGG+CGG | + | chr8_3:16106999-16107018 | None:intergenic | 45.0% | |
| GTTGGAGGAGGAGTTTGTGT+TGG | + | chr8_3:16101720-16101739 | None:intergenic | 50.0% | |
| CAGAGCTTGGCAGCATGTTT+AGG | + | chr8_3:16101848-16101867 | None:intergenic | 50.0% | |
| TCTGCCTCGTTTGCAAGTCA+TGG | - | chr8_3:16101864-16101883 | Msa1279220:three_prime_UTR | 50.0% | |
| ! | ATCGCCATGACTTGCAAACG+AGG | + | chr8_3:16101871-16101890 | None:intergenic | 50.0% |
| CCTCCCACTGTTATCATCGA+CGG | - | chr8_3:16102150-16102169 | Msa1279220:intron | 50.0% | |
| GAGCAAAGAGGATCGTCCAT+TGG | - | chr8_3:16102391-16102410 | Msa1279220:intron | 50.0% | |
| CGGTGTCTGCAAGAAGGAAA+GGG | + | chr8_3:16104023-16104042 | None:intergenic | 50.0% | |
| ! | TCGGTGTCTGCAAGAAGGAA+AGG | + | chr8_3:16104024-16104043 | None:intergenic | 50.0% |
| !! | CTGATTCGGTGTCTGCAAGA+AGG | + | chr8_3:16104029-16104048 | None:intergenic | 50.0% |
| ! | TGGTTGAGAGCACAAACAGC+AGG | + | chr8_3:16104114-16104133 | None:intergenic | 50.0% |
| ! | TGCTGTTTGTGCTCTCAACC+AGG | - | chr8_3:16104113-16104132 | Msa1279220:intron | 50.0% |
| GATTTGAGTGACCAGAGCGA+TGG | + | chr8_3:16104858-16104877 | None:intergenic | 50.0% | |
| TAGGAGGGTTCAAGGGTAGA+GGG | + | chr8_3:16104914-16104933 | None:intergenic | 50.0% | |
| ATAGGAGGGTTCAAGGGTAG+AGG | + | chr8_3:16104915-16104934 | None:intergenic | 50.0% | |
| !! | ATGCCACAAAGGTACTTGGG+AGG | - | chr8_3:16105647-16105666 | Msa1279220:intron | 50.0% |
| TGTCCTCCCAAGTACCTTTG+TGG | + | chr8_3:16105653-16105672 | None:intergenic | 50.0% | |
| GGTACTTGGGAGGACAAAAG+TGG | - | chr8_3:16105657-16105676 | Msa1279220:intron | 50.0% | |
| GTGGTTGCCTGATACCTTGT+TGG | - | chr8_3:16105772-16105791 | Msa1279220:intron | 50.0% | |
| TTATTCCAGCCACGTCTTGC+TGG | - | chr8_3:16105929-16105948 | Msa1279220:intron | 50.0% | |
| TATTCCAGCCACGTCTTGCT+GGG | - | chr8_3:16105930-16105949 | Msa1279220:intron | 50.0% | |
| CCATACAGAGAGCTATGGCA+TGG | + | chr8_3:16106385-16106404 | None:intergenic | 50.0% | |
| CCATGCCATAGCTCTCTGTA+TGG | - | chr8_3:16106382-16106401 | Msa1279220:intron | 50.0% | |
| AGGACTGTTGTCTTATCGGG+AGG | - | chr8_3:16106449-16106468 | Msa1279220:intron | 50.0% | |
| GGACTGTTGTCTTATCGGGA+GGG | - | chr8_3:16106450-16106469 | Msa1279220:intron | 50.0% | |
| GAGGGTCTGCATGTTTACCA+GGG | - | chr8_3:16106468-16106487 | Msa1279220:intron | 50.0% | |
| ! | GCATGTTTACCAGGGTTAGC+AGG | - | chr8_3:16106476-16106495 | Msa1279220:intron | 50.0% |
| GGAAGTTTACCTGCTAACCC+TGG | + | chr8_3:16106488-16106507 | None:intergenic | 50.0% | |
| GGTGCAGATACTGCATGGTT+TGG | - | chr8_3:16106701-16106720 | Msa1279220:intron | 50.0% | |
| ! | GGAGGAGTTTGTGTTGGTGG+TGG | + | chr8_3:16101714-16101733 | None:intergenic | 55.0% |
| GGAGGAGGAGTTTGTGTTGG+TGG | + | chr8_3:16101717-16101736 | None:intergenic | 55.0% | |
| CTTGCAAACGAGGCAGAGCT+TGG | + | chr8_3:16101861-16101880 | None:intergenic | 55.0% | |
| CCGTCGATGATAACAGTGGG+AGG | + | chr8_3:16102153-16102172 | None:intergenic | 55.0% | |
| TGGCAGGTGCGAGTCATTCT+TGG | - | chr8_3:16102793-16102812 | Msa1279220:intron | 55.0% | |
| ATGCTGTGCGCCTACGTATG+TGG | - | chr8_3:16103637-16103656 | Msa1279220:intron | 55.0% | |
| AAAGCTCAGAGCCATCGCTC+TGG | - | chr8_3:16104844-16104863 | Msa1279220:CDS | 55.0% | |
| AGGAGGGTTCAAGGGTAGAG+GGG | + | chr8_3:16104913-16104932 | None:intergenic | 55.0% | |
| AGTGATGCGAAAGGTGGGTG+TGG | - | chr8_3:16105473-16105492 | Msa1279220:intron | 55.0% | |
| AAGGTGGGTGTGGAGGTTGT+TGG | - | chr8_3:16105483-16105502 | Msa1279220:intron | 55.0% | |
| AGGTGGGTGTGGAGGTTGTT+GGG | - | chr8_3:16105484-16105503 | Msa1279220:intron | 55.0% | |
| CACCGTTCGCACACTGAAAG+AGG | - | chr8_3:16105581-16105600 | Msa1279220:intron | 55.0% | |
| ATTCCAGCCACGTCTTGCTG+GGG | - | chr8_3:16105931-16105950 | Msa1279220:intron | 55.0% | |
| ACTTACACCCCAGCAAGACG+TGG | + | chr8_3:16105941-16105960 | None:intergenic | 55.0% | |
| GGAGGGTCTGCATGTTTACC+AGG | - | chr8_3:16106467-16106486 | Msa1279220:intron | 55.0% | |
| AGAGTCATCCCTCCTCCACA+CGG | - | chr8_3:16106680-16106699 | Msa1279220:intron | 55.0% | |
| TATCTGCACCGTGTGGAGGA+GGG | + | chr8_3:16106691-16106710 | None:intergenic | 55.0% | |
| CATGCAGTATCTGCACCGTG+TGG | + | chr8_3:16106698-16106717 | None:intergenic | 55.0% | |
| CACACGGTGCAGATACTGCA+TGG | - | chr8_3:16106696-16106715 | Msa1279220:intron | 55.0% | |
| ! | TTTGTTATGCACCAGGGGGC+AGG | + | chr8_3:16106967-16106986 | None:intergenic | 55.0% |
| !! | GCGATGGCTCTGAGCTTTCG+AGG | + | chr8_3:16104842-16104861 | None:intergenic | 60.0% |
| GAGGGTTCAAGGGTAGAGGG+GGG | + | chr8_3:16104911-16104930 | None:intergenic | 60.0% | |
| GGAGGGTTCAAGGGTAGAGG+GGG | + | chr8_3:16104912-16104931 | None:intergenic | 60.0% | |
| GATGCGAAAGGTGGGTGTGG+AGG | - | chr8_3:16105476-16105495 | Msa1279220:intron | 60.0% | |
| GGTGTGGAGGTTGTTGGGCT+TGG | - | chr8_3:16105489-16105508 | Msa1279220:intron | 60.0% | |
| GTATCTGCACCGTGTGGAGG+AGG | + | chr8_3:16106692-16106711 | None:intergenic | 60.0% | |
| GCAGTATCTGCACCGTGTGG+AGG | + | chr8_3:16106695-16106714 | None:intergenic | 60.0% | |
| TGAGTACCTTTCCTGCCCCC+TGG | - | chr8_3:16106953-16106972 | Msa1279220:CDS | 60.0% | |
| TATGCACCAGGGGGCAGGAA+AGG | + | chr8_3:16106962-16106981 | None:intergenic | 60.0% | |
| !! | ATAGTGGCGGTGGCGGGTAG+TGG | - | chr8_3:16101551-16101570 | Msa1279220:three_prime_UTR | 65.0% |
| !! | TAGTGGCGGTGGCGGGTAGT+GGG | - | chr8_3:16101552-16101571 | Msa1279220:three_prime_UTR | 65.0% |
| !! | GGTGGCGGGTAGTGGGTCAA+TGG | - | chr8_3:16101559-16101578 | Msa1279220:three_prime_UTR | 65.0% |
| CAGTGGGAGGAAGTCGCTCC+CGG | + | chr8_3:16102140-16102159 | None:intergenic | 65.0% | |
| ACACCCCAGCAAGACGTGGC+TGG | + | chr8_3:16105937-16105956 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 16101551 | 16107385 | 16101551 | ID=Msa1279220;Name=Msa1279220 |
| chr8_3 | mRNA | 16101551 | 16107385 | 16101551 | ID=Msa1279220-mRNA-1;Parent=Msa1279220;Name=Msa1279220-mRNA-1;_AED=0.17;_eAED=0.17;_QI=102|0.7|0.90|1|0.7|0.90|11|356|442 |
| chr8_3 | exon | 16101551 | 16101984 | 16101551 | ID=Msa1279220-mRNA-1:exon:6305;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16102194 | 16102312 | 16102194 | ID=Msa1279220-mRNA-1:exon:6304;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16102439 | 16102572 | 16102439 | ID=Msa1279220-mRNA-1:exon:6303;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16102982 | 16103127 | 16102982 | ID=Msa1279220-mRNA-1:exon:6302;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16103334 | 16103476 | 16103334 | ID=Msa1279220-mRNA-1:exon:6301;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16104268 | 16104349 | 16104268 | ID=Msa1279220-mRNA-1:exon:6300;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16104802 | 16104899 | 16104802 | ID=Msa1279220-mRNA-1:exon:6299;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16105868 | 16105929 | 16105868 | ID=Msa1279220-mRNA-1:exon:6298;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16105995 | 16106040 | 16105995 | ID=Msa1279220-mRNA-1:exon:6297;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16106503 | 16106573 | 16106503 | ID=Msa1279220-mRNA-1:exon:6296;Parent=Msa1279220-mRNA-1 |
| chr8_3 | exon | 16106934 | 16107385 | 16106934 | ID=Msa1279220-mRNA-1:exon:6295;Parent=Msa1279220-mRNA-1 |
| chr8_3 | five_prime_UTR | 16107284 | 16107385 | 16107284 | ID=Msa1279220-mRNA-1:five_prime_utr;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16106934 | 16107283 | 16106934 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16106503 | 16106573 | 16106503 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16105995 | 16106040 | 16105995 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16105868 | 16105929 | 16105868 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16104802 | 16104899 | 16104802 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16104268 | 16104349 | 16104268 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16103334 | 16103476 | 16103334 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16102982 | 16103127 | 16102982 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16102439 | 16102572 | 16102439 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16102194 | 16102312 | 16102194 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | CDS | 16101907 | 16101984 | 16101907 | ID=Msa1279220-mRNA-1:cds;Parent=Msa1279220-mRNA-1 |
| chr8_3 | three_prime_UTR | 16101551 | 16101906 | 16101551 | ID=Msa1279220-mRNA-1:three_prime_utr;Parent=Msa1279220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
