AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041950 MtrunA17_Chr7g0265331 93.159 497 9 1 1 472 1 497 0.0 933
Msa1041950 MtrunA17_Chr1g0179751 66.390 482 126 7 17 468 46 521 0.0 627
Msa1041950 MtrunA17_Chr2g0320621 58.125 480 171 5 10 463 9 484 0.0 542
Msa1041950 MtrunA17_Chr4g0027681 56.144 472 178 5 28 472 25 494 0.0 530
Msa1041950 MtrunA17_Chr1g0189381 38.261 460 240 9 37 468 31 474 1.83e-98 304
Msa1041950 MtrunA17_Chr7g0249451 38.411 453 236 10 42 467 38 474 2.51e-94 293
Msa1041950 MtrunA17_Chr7g0221681 37.701 435 233 9 37 443 34 458 1.40e-93 291
Msa1041950 MtrunA17_Chr4g0019931 57.377 122 52 0 86 207 1 122 1.24e-40 141
Msa1041950 MtrunA17_Chr4g0053721 29.124 388 199 14 75 416 74 431 2.37e-36 142
Msa1041950 MtrunA17_Chr5g0401601 28.382 377 206 13 80 416 87 439 1.09e-34 137
Msa1041950 MtrunA17_Chr1g0159791 26.972 393 213 12 68 415 46 409 8.50e-34 131
Msa1041950 MtrunA17_Chr6g0484731 24.942 429 256 14 41 425 154 560 1.18e-31 127
Msa1041950 MtrunA17_Chr4g0010951 28.676 408 203 16 77 415 57 445 1.53e-30 123
Msa1041950 MtrunA17_Chr8g0371371 26.950 423 250 15 48 434 78 477 3.86e-29 120
Msa1041950 MtrunA17_Chr3g0130741 25.485 412 216 18 68 430 73 442 6.20e-28 115
Msa1041950 MtrunA17_Chr5g0430861 67.949 78 22 1 207 281 27 104 8.58e-28 106
Msa1041950 MtrunA17_Chr2g0308001 29.428 367 211 14 82 416 59 409 1.10e-27 114
Msa1041950 MtrunA17_Chr3g0130931 28.150 373 206 17 80 416 103 449 3.12e-27 113
Msa1041950 MtrunA17_Chr2g0307991 28.726 369 206 15 82 416 60 405 4.02e-27 112
Msa1041950 MtrunA17_Chr5g0406001 26.151 478 275 21 45 467 72 526 9.52e-26 110
Msa1041950 MtrunA17_Chr2g0310831 28.338 367 215 15 80 416 93 441 6.85e-25 106
Msa1041950 MtrunA17_Chr1g0212321 26.456 412 239 15 36 415 107 486 1.30e-24 106
Msa1041950 MtrunA17_Chr5g0442921 26.720 378 223 15 80 416 190 554 2.34e-24 106
Msa1041950 MtrunA17_Chr3g0095891 31.560 282 166 11 80 346 96 365 2.47e-24 105
Msa1041950 MtrunA17_Chr8g0384731 23.810 399 224 17 77 430 69 432 5.11e-24 103
Msa1041950 MtrunA17_Chr5g0435871 27.913 369 213 15 80 416 88 435 5.94e-24 103
Msa1041950 MtrunA17_Chr3g0087851 25.474 369 232 10 76 416 84 437 9.67e-24 103
Msa1041950 MtrunA17_Chr2g0310821 29.839 372 191 19 80 416 107 443 1.77e-23 102
Msa1041950 MtrunA17_Chr2g0310801 28.533 368 210 16 80 416 89 434 1.87e-23 102
Msa1041950 MtrunA17_Chr8g0371351 24.948 485 275 19 45 466 64 522 3.19e-23 102
Msa1041950 MtrunA17_Chr8g0352671 27.346 373 214 16 79 416 87 437 3.30e-23 101
Msa1041950 MtrunA17_Chr7g0275731 25.000 368 223 12 80 416 140 485 6.08e-23 101
Msa1041950 MtrunA17_Chr5g0415951 27.419 372 220 14 76 416 83 435 6.67e-23 100
Msa1041950 MtrunA17_Chr5g0395911 27.660 376 208 16 79 416 65 414 9.71e-23 100
Msa1041950 MtrunA17_Chr2g0333991 27.493 371 212 15 79 414 86 434 1.32e-22 100
Msa1041950 MtrunA17_Chr5g0435971 27.642 369 214 15 80 416 85 432 1.62e-22 99.8
Msa1041950 MtrunA17_Chr4g0023351 32.114 246 141 9 82 317 59 288 2.10e-22 97.1
Msa1041950 MtrunA17_Chr3g0078321 25.581 387 210 15 79 416 56 413 2.93e-22 98.6
Msa1041950 MtrunA17_Chr1g0165201 25.948 343 201 14 80 392 127 446 5.34e-22 98.6
Msa1041950 MtrunA17_Chr1g0210201 26.005 423 251 15 28 415 72 467 5.37e-22 98.6
Msa1041950 MtrunA17_Chr3g0124421 25.616 406 251 13 45 415 61 450 9.08e-22 98.2
Msa1041950 MtrunA17_Chr8g0386441 27.586 377 202 17 80 416 85 430 1.93e-21 96.7
Msa1041950 MtrunA17_Chr5g0419291 25.962 416 241 16 35 415 45 428 9.02e-21 94.4
Msa1041950 MtrunA17_Chr8g0352661 28.307 378 205 18 80 416 85 437 3.10e-20 92.8
Msa1041950 MtrunA17_Chr4g0001991 29.650 371 196 18 86 417 175 519 8.92e-20 92.0
Msa1041950 MtrunA17_Chr2g0291201 30.214 374 200 17 80 415 101 451 9.94e-20 91.7
Msa1041950 MtrunA17_Chr2g0311451 27.078 373 215 15 79 416 86 436 1.04e-19 91.3
Msa1041950 MtrunA17_Chr7g0239001 27.451 357 196 17 86 408 64 391 2.23e-19 90.5
Msa1041950 MtrunA17_Chr5g0395931 29.323 266 153 11 79 332 86 328 7.35e-19 88.6
Msa1041950 MtrunA17_Chr6g0484901 24.658 365 214 13 82 415 157 491 1.50e-18 88.2
Msa1041950 MtrunA17_Chr5g0395871 25.745 369 219 15 80 416 80 425 4.98e-18 86.3
Msa1041950 MtrunA17_Chr5g0425141 24.000 375 225 13 78 415 98 449 7.56e-18 86.3
Msa1041950 MtrunA17_Chr2g0307461 30.275 327 182 16 64 368 52 354 2.93e-17 84.0
Msa1041950 MtrunA17_Chr6g0457401 25.974 385 236 12 65 416 69 437 3.13e-17 84.0
Msa1041950 MtrunA17_Chr2g0312941 23.426 397 214 16 76 411 82 449 1.03e-16 82.4
Msa1041950 MtrunA17_Chr7g0267171 26.510 298 166 12 80 347 89 363 5.47e-16 80.1
Msa1041950 MtrunA17_Chr3g0112051 23.433 367 215 17 86 418 78 412 1.67e-15 78.6
Msa1041950 MtrunA17_Chr6g0486981 23.450 371 226 13 82 416 89 437 2.80e-15 77.8
Msa1041950 MtrunA17_Chr3g0110191 24.227 388 206 16 86 420 91 443 5.10e-15 77.0
Msa1041950 MtrunA17_Chr3g0099901 26.923 286 179 11 80 357 141 404 8.36e-15 76.6
Msa1041950 MtrunA17_Chr2g0309561 25.159 314 191 9 66 342 104 410 9.54e-15 76.6
Msa1041950 MtrunA17_Chr8g0353261 24.163 418 246 19 35 416 52 434 1.03e-14 75.9
Msa1041950 MtrunA17_Chr3g0099891 26.354 277 161 8 80 345 116 360 1.07e-14 76.3
Msa1041950 MtrunA17_Chr6g0487471 26.221 389 197 21 80 416 85 435 4.90e-14 73.9
Msa1041950 MtrunA17_Chr1g0164401 22.764 369 219 16 82 416 93 429 4.55e-13 70.9
Msa1041950 MtrunA17_Chr4g0061641 29.455 275 156 12 82 342 56 306 1.55e-11 65.9
Msa1041950 MtrunA17_Chr5g0395891 32.195 205 107 10 141 332 20 205 4.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041950 AT2G36670.2 59.236 471 157 5 24 464 38 503 0.0 560
Msa1041950 AT5G22850.1 57.627 472 170 6 22 467 24 491 0.0 558
Msa1041950 AT2G36670.1 58.613 476 157 6 24 464 38 508 0.0 554
Msa1041950 AT2G36670.4 59.709 412 137 3 77 463 29 436 5.66e-175 498
Msa1041950 AT2G36670.3 59.709 412 137 3 77 463 29 436 5.66e-175 498
Msa1041950 AT1G08210.1 52.893 484 197 7 5 463 10 487 1.08e-166 479
Msa1041950 AT1G08210.3 52.893 484 197 7 5 463 58 535 1.70e-166 481
Msa1041950 AT1G08210.4 52.893 484 197 7 5 463 44 521 1.84e-166 480
Msa1041950 AT1G08210.2 50.000 512 198 8 5 464 10 515 1.83e-160 464
Msa1041950 AT1G05840.1 40.633 411 209 8 39 422 43 445 8.89e-101 310
Msa1041950 AT3G02740.1 37.723 448 235 12 41 461 50 480 1.04e-97 303
Msa1041950 AT3G02740.2 38.235 408 214 10 81 461 9 405 7.83e-91 283
Msa1041950 AT5G36260.1 37.389 452 241 11 39 462 41 478 6.98e-90 282
Msa1041950 AT1G65240.1 35.683 454 239 12 42 466 40 469 2.64e-81 260
Msa1041950 AT3G42550.1 33.053 475 224 16 12 451 10 425 2.18e-68 225
Msa1041950 AT5G43100.2 28.726 369 207 14 80 416 74 418 7.26e-37 142
Msa1041950 AT5G43100.1 28.440 436 243 18 80 471 74 484 8.66e-37 143
Msa1041950 AT3G25700.1 27.835 388 212 16 80 417 82 451 1.94e-31 126
Msa1041950 AT3G50050.1 28.109 402 218 15 56 416 66 437 1.10e-30 125
Msa1041950 AT2G17760.1 27.100 369 213 14 81 415 103 449 2.70e-30 123
Msa1041950 AT4G33490.2 26.044 407 217 17 68 424 48 420 1.17e-29 120
Msa1041950 AT1G44130.1 26.546 388 206 15 77 416 44 400 2.73e-29 119
Msa1041950 AT1G49050.1 24.093 386 231 12 77 415 198 568 1.94e-27 115
Msa1041950 AT1G49050.2 23.822 382 229 12 81 415 29 395 2.20e-27 114
Msa1041950 AT1G77480.1 26.684 386 222 10 77 422 62 426 4.28e-27 114
Msa1041950 AT1G77480.2 26.913 379 216 10 77 415 62 419 1.15e-26 112
Msa1041950 AT5G10080.1 28.571 371 213 14 81 415 99 453 9.54e-26 110
Msa1041950 AT3G51360.1 25.974 385 220 17 71 416 78 436 1.20e-25 109
Msa1041950 AT3G51360.9 25.974 385 220 17 71 416 88 446 1.33e-25 109
Msa1041950 AT4G33490.1 30.112 269 156 12 68 331 45 286 1.36e-25 108
Msa1041950 AT3G51360.7 25.594 379 215 17 78 416 1 352 1.49e-25 108
Msa1041950 AT2G42980.1 25.526 380 228 14 80 416 158 525 2.05e-25 109
Msa1041950 AT3G51350.1 24.703 421 259 14 29 415 56 452 2.70e-25 109
Msa1041950 AT1G01300.1 27.446 368 214 13 80 416 140 485 1.01e-24 107
Msa1041950 AT2G03200.1 26.053 380 211 13 80 415 105 458 4.04e-24 105
Msa1041950 AT3G51340.2 25.815 368 226 13 77 415 98 447 5.35e-24 105
Msa1041950 AT4G30040.1 29.630 297 171 13 76 357 79 352 5.57e-24 104
Msa1041950 AT1G25510.1 27.835 388 214 15 59 415 131 483 7.36e-24 104
Msa1041950 AT3G51360.5 28.526 312 183 14 71 368 88 373 4.25e-23 101
Msa1041950 AT3G59080.1 25.722 381 224 16 80 416 168 533 4.57e-23 102
Msa1041950 AT3G51360.4 28.526 312 183 14 71 368 78 363 5.01e-23 101
Msa1041950 AT3G51360.6 28.526 312 183 14 71 368 88 373 5.53e-23 101
Msa1041950 AT3G51360.10 28.526 312 183 14 71 368 78 363 6.72e-23 101
Msa1041950 AT3G51360.2 29.032 279 165 12 71 342 88 340 8.05e-23 99.8
Msa1041950 AT5G02190.1 29.964 277 155 12 91 348 82 338 8.92e-23 100
Msa1041950 AT1G09750.1 27.642 369 216 13 79 416 101 449 1.10e-22 100
Msa1041950 AT1G49050.3 24.549 277 187 7 77 346 198 459 1.34e-22 100
Msa1041950 AT3G51340.3 27.143 280 180 8 77 349 98 360 3.17e-22 99.0
Msa1041950 AT3G51340.4 27.143 280 180 8 77 349 98 360 4.74e-22 98.2
Msa1041950 AT3G51340.1 24.021 383 226 12 77 415 98 459 6.53e-22 99.0
Msa1041950 AT3G18490.1 28.108 370 203 16 80 415 160 500 7.37e-22 98.6
Msa1041950 AT4G35880.1 25.661 378 206 18 81 415 106 451 2.64e-21 97.1
Msa1041950 AT4G35880.2 29.119 261 152 11 81 331 106 343 4.72e-21 95.9
Msa1041950 AT3G61820.1 26.521 411 241 18 42 415 97 483 6.80e-21 95.5
Msa1041950 AT5G10770.1 26.975 367 216 13 80 416 130 474 7.78e-21 95.5
Msa1041950 AT2G35615.1 30.389 283 164 9 80 343 83 351 8.54e-21 95.1
Msa1041950 AT3G54400.1 30.282 284 164 13 82 357 88 345 1.56e-20 94.0
Msa1041950 AT1G64830.1 28.814 413 241 19 35 416 39 429 1.69e-20 94.0
Msa1041950 AT2G23945.1 29.375 320 186 15 35 342 52 343 2.38e-20 94.0
Msa1041950 AT3G20015.1 27.078 421 229 19 37 410 76 465 2.87e-20 93.6
Msa1041950 AT3G51330.3 26.954 371 219 12 81 416 101 454 2.92e-20 93.6
Msa1041950 AT3G51330.1 27.027 370 218 12 81 415 101 453 4.53e-20 93.6
Msa1041950 AT3G12700.1 26.568 271 173 8 72 331 96 351 4.95e-20 92.8
Msa1041950 AT1G66180.1 24.282 383 213 16 86 419 76 430 2.10e-18 87.8
Msa1041950 AT3G51330.2 26.816 358 210 12 81 403 101 441 2.62e-17 84.7
Msa1041950 AT4G30030.1 27.626 257 155 9 82 332 78 309 3.29e-17 84.0
Msa1041950 AT2G39710.1 27.675 271 156 12 86 340 69 315 3.73e-17 84.0
Msa1041950 AT1G31450.1 28.117 377 214 13 80 416 83 442 5.64e-17 83.6
Msa1041950 AT5G37540.1 23.560 382 217 15 86 417 84 440 1.68e-15 79.0
Msa1041950 AT5G33340.1 27.540 374 208 17 80 416 88 435 5.58e-15 77.4
Msa1041950 AT3G59080.2 24.211 380 195 16 80 416 168 497 6.19e-15 77.4
Msa1041950 AT5G07030.1 26.703 367 211 17 82 416 115 455 1.60e-13 72.8
Msa1041950 AT3G25700.2 30.435 138 86 3 80 214 82 212 1.75e-13 72.0
Msa1041950 AT3G51360.3 23.795 332 190 16 121 416 6 310 2.15e-13 72.0
Msa1041950 AT3G51360.8 23.795 332 190 16 121 416 6 310 2.15e-13 72.0
Msa1041950 AT5G10760.1 25.337 371 206 18 80 415 130 464 2.44e-13 72.4
Msa1041950 AT2G28225.1 26.073 303 178 11 77 369 62 328 3.65e-13 71.6
Msa1041950 AT2G28030.1 27.063 303 163 14 81 369 60 318 4.20e-13 71.2
Msa1041950 AT2G28040.2 25.763 295 174 12 82 369 56 312 6.81e-13 70.5
Msa1041950 AT2G28040.1 25.763 295 174 12 82 369 65 321 8.29e-13 70.5
Msa1041950 AT2G28220.1 24.242 297 183 11 81 369 66 328 3.32e-11 65.5

Find 141 sgRNAs with CRISPR-Local

Find 779 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAGTTTCCACATACTAAT+TGG 0.138204 7_1:-79635175 None:intergenic
ACTGGTTCTTGGTGAAATTT+TGG 0.154711 7_1:+79625967 Msa1041950:CDS
ACTGCGGATCTCACTGTAAA+AGG 0.201454 7_1:+79635192 Msa1041950:three_prime_UTR
TCGGCATACCCTTCATAATT+AGG 0.214703 7_1:+79635096 Msa1041950:three_prime_UTR
CTGGTTTCCTTTGGAAATAA+TGG 0.224910 7_1:-79628224 None:intergenic
CACCTATCAGTCTGGGGATT+TGG 0.259412 7_1:+79625805 Msa1041950:CDS
AAGAGTCGAAAGCTATTCTT+TGG 0.271201 7_1:+79635038 Msa1041950:three_prime_UTR
ATACTGGAAGTGATATATTA+TGG 0.272156 7_1:+79624910 Msa1041950:CDS
AGTGGAGTATAAACAATATT+TGG 0.278370 7_1:-79625992 None:intergenic
TGCCCCAAATCTAGTGGTTT+AGG 0.287877 7_1:+79624957 Msa1041950:CDS
CACCCCTAAACCACTAGATT+TGG 0.292899 7_1:-79624961 None:intergenic
ACCCCTAAACCACTAGATTT+GGG 0.310974 7_1:-79624960 None:intergenic
CTATTCTTTGGAAAACATAC+TGG 0.315547 7_1:+79635050 Msa1041950:three_prime_UTR
AAAGAAAGAATGAAATGAAT+AGG 0.319679 7_1:-79624422 None:intergenic
GCCCCAAATCTAGTGGTTTA+GGG 0.324310 7_1:+79624958 Msa1041950:CDS
TGATATACTTCTGAAGTTGA+TGG 0.326352 7_1:+79635248 Msa1041950:three_prime_UTR
CGTTCCTTTGTTGGTGGCTT+TGG 0.331860 7_1:+79624520 Msa1041950:CDS
TCCTTTGGAAATAATGGGTT+TGG 0.336132 7_1:-79628218 None:intergenic
AGTGTTCTCTCATTGCTTAA+AGG 0.338954 7_1:+79625922 Msa1041950:CDS
TGGTTTCCTTTGGAAATAAT+GGG 0.357720 7_1:-79628223 None:intergenic
CAAAGGAAACCAGTGTTATC+TGG 0.358026 7_1:+79628234 Msa1041950:CDS
GTGTTCTCTCATTGCTTAAA+GGG 0.374201 7_1:+79625923 Msa1041950:CDS
GACTTAGCTAATCAACGAAT+TGG 0.375931 7_1:+79634734 Msa1041950:CDS
ATCTTGCAAGACGGCGGTGC+TGG 0.375992 7_1:+79624683 Msa1041950:CDS
CAGATAACACTGGTTTCCTT+TGG 0.377630 7_1:-79628233 None:intergenic
GGGGATGGAAGTGGGACGTC+TGG 0.382505 7_1:+79625443 Msa1041950:CDS
AAAAGAGAACATACTGTAAT+GGG 0.384501 7_1:-79626018 None:intergenic
AAATATGCGCGTTCCTTTGT+TGG 0.394571 7_1:+79624511 Msa1041950:exon
CTCTCATTGCTTAAAGGGAC+AGG 0.395990 7_1:+79625928 Msa1041950:CDS
GTTATATGTATACTTGCTCT+TGG 0.400490 7_1:+79635385 Msa1041950:three_prime_UTR
TCTCCAAGTTGCAACTTGTA+AGG 0.402644 7_1:+79634952 Msa1041950:CDS
AGTTACAACACAACATTGAT+TGG 0.410709 7_1:-79635316 None:intergenic
CTTCAAAGCATTGCGGTCAA+TGG 0.410851 7_1:+79627020 Msa1041950:CDS
AGGTGTAGCACCTATCAGTC+TGG 0.411075 7_1:+79625797 Msa1041950:intron
AAGCAATGAGAGAACACTTT+GGG 0.415774 7_1:-79625917 None:intergenic
CGCAATGGCGGTGACGGTTA+CGG 0.415896 7_1:+79624544 Msa1041950:CDS
CGAGGAACTATAATTGATTC+CGG 0.417921 7_1:+79627089 Msa1041950:CDS
AAGAAAGAATGAAATGAATA+GGG 0.419438 7_1:-79624421 None:intergenic
ACCTCCGATCCTTACTTAGT+TGG 0.422270 7_1:+79624731 Msa1041950:CDS
GGAGGAGGCATACTGGTTCT+TGG 0.423837 7_1:+79625956 Msa1041950:CDS
GAGTTCATCCACTGCTGCGC+TGG 0.433717 7_1:+79625325 Msa1041950:CDS
AGTTCAACTTGGTGGTTAAG+AGG 0.434274 7_1:-79624617 None:intergenic
TGAACGTAAAATTCTTTAGC+AGG 0.437141 7_1:-79624882 None:intergenic
AAGGGACAGGGCAGTGGAGG+AGG 0.437682 7_1:+79625941 Msa1041950:CDS
GCAAATACATCTTGATCGAT+TGG 0.441686 7_1:-79627053 None:intergenic
GATCAAGATGTATTTGCAAC+AGG 0.445817 7_1:+79627059 Msa1041950:CDS
AGTCGATGTTTATTTATTGT+CGG 0.453220 7_1:+79635077 Msa1041950:three_prime_UTR
GAAAAGAGAACATACTGTAA+TGG 0.456462 7_1:-79626019 None:intergenic
CCTCCGATCCTTACTTAGTT+GGG 0.457265 7_1:+79624732 Msa1041950:CDS
AGGGCTCTGTTGTTGAGAAA+TGG 0.457570 7_1:+79635212 Msa1041950:three_prime_UTR
GTGTTCTTATGCGGTTCAAA+CGG 0.458370 7_1:+79625367 Msa1041950:CDS
CAAATACATCTTGATCGATT+GGG 0.458939 7_1:-79627052 None:intergenic
CGGACAGAAAAGGCAGTTGA+TGG 0.459842 7_1:+79625830 Msa1041950:CDS
AGTAAGGATCGGAGGTTCCT+TGG 0.460466 7_1:-79624724 None:intergenic
AGCAACGGTAATGTAATAGA+TGG 0.461628 7_1:-79624477 None:intergenic
TACAAGTCAGTGCTCTTCTC+AGG 0.463939 7_1:+79625391 Msa1041950:CDS
GAACTTACAGCATTGAGAAA+AGG 0.465695 7_1:-79627149 None:intergenic
GCAGTTTCCACATACTAATT+GGG 0.466227 7_1:-79635174 None:intergenic
TACCCTTCATAATTAGGAAC+GGG 0.468220 7_1:+79635102 Msa1041950:three_prime_UTR
TGCTTAAAGGGACAGGGCAG+TGG 0.470903 7_1:+79625935 Msa1041950:CDS
AGCCAAATCCCCAGACTGAT+AGG 0.472138 7_1:-79625807 None:intergenic
AGAATTGAAATAACCTGGTT+GGG 0.473934 7_1:-79628258 None:intergenic
ATGGCATACCCAACTAAGTA+AGG 0.478104 7_1:-79624740 None:intergenic
AACTTGGTGGTTAAGAGGGA+TGG 0.484441 7_1:-79624612 None:intergenic
TTTCAGTATGGGGATGGAAG+TGG 0.485519 7_1:+79625434 Msa1041950:CDS
TGAAGATTTAAATTATAATG+AGG 0.489504 7_1:-79627002 None:intergenic
TATGCGCGTTCCTTTGTTGG+TGG 0.491394 7_1:+79624514 Msa1041950:exon
GGGCAGTGGAGGAGGCATAC+TGG 0.491596 7_1:+79625949 Msa1041950:CDS
CTGCGGATCTCACTGTAAAA+GGG 0.494612 7_1:+79635193 Msa1041950:three_prime_UTR
GAGAGGTGAAGTCAAGTCAA+TGG 0.495653 7_1:-79624387 None:intergenic
AATCCTTACAAGTTGCAACT+TGG 0.495945 7_1:-79634955 None:intergenic
CCCCGGAAAACCGCCGCATA+CGG 0.497048 7_1:-79624567 None:intergenic
ACTCCCGTTCCTAATTATGA+AGG 0.498900 7_1:-79635105 None:intergenic
TTTGGCCGCAATGGCGGTGA+CGG 0.499664 7_1:+79624538 Msa1041950:CDS
GCTGGTTTCCTGCTCTGATC+CGG 0.500916 7_1:+79625343 Msa1041950:CDS
TGTGGCTACGAGCAAGAGTA+AGG 0.501253 7_1:+79634875 Msa1041950:CDS
TCCAAACCCATTATTTCCAA+AGG 0.504188 7_1:+79628217 Msa1041950:CDS
GAGAATTGAAATAACCTGGT+TGG 0.510837 7_1:-79628259 None:intergenic
TATTCTTTGGAAAACATACT+GGG 0.512983 7_1:+79635051 Msa1041950:three_prime_UTR
GTTGGTGGCTTTGGCCGCAA+TGG 0.524773 7_1:+79624529 Msa1041950:CDS
GGTGCTGCAATGTGGTGCAT+TGG 0.527548 7_1:+79634329 Msa1041950:CDS
GAGTGGTGAGTTCAACTTGG+TGG 0.527798 7_1:-79624625 None:intergenic
AATTGATTCCGGTACTACAT+TGG 0.535206 7_1:+79627100 Msa1041950:CDS
CACAGAGACATTTACAGCTA+AGG 0.535686 7_1:-79634856 None:intergenic
GCAGGAAACCAGCGCAGCAG+TGG 0.535985 7_1:-79625333 None:intergenic
GGATTTGGCTCGGACAGAAA+AGG 0.537030 7_1:+79625820 Msa1041950:CDS
GGTGTAGCACCTATCAGTCT+GGG 0.537155 7_1:+79625798 Msa1041950:intron
CACAACATTGATTGGTAGAG+TGG 0.537521 7_1:-79635308 None:intergenic
TTCAGTATGGGGATGGAAGT+GGG 0.538847 7_1:+79625435 Msa1041950:CDS
ATTCTTGACTTCTCAGTCCA+AGG 0.539154 7_1:+79624707 Msa1041950:CDS
AAGGATGCATACCTCAGTGC+AGG 0.544723 7_1:+79634894 Msa1041950:CDS
ATCAGTCTGGGGATTTGGCT+CGG 0.545545 7_1:+79625810 Msa1041950:CDS
GTTGCAACTTGTAAGGATTG+TGG 0.554985 7_1:+79634959 Msa1041950:CDS
GTTTATAGTCTGACATCAGA+TGG 0.555614 7_1:-79635409 None:intergenic
TAGCTAATCAACGAATTGGA+TGG 0.564681 7_1:+79634738 Msa1041950:CDS
TGAGAGTGGTGAGTTCAACT+TGG 0.565316 7_1:-79624628 None:intergenic
TTAAAGGGACAGGGCAGTGG+AGG 0.565332 7_1:+79625938 Msa1041950:CDS
AAGGTATGCCAATGTAGTAC+CGG 0.566914 7_1:-79627108 None:intergenic
AGAACACACCGGATCAGAGC+AGG 0.568832 7_1:-79625351 None:intergenic
TTGGTAGAGTGGAAGTGCTC+TGG 0.570808 7_1:-79635297 None:intergenic
GTTCAACTTGGTGGTTAAGA+GGG 0.578619 7_1:-79624616 None:intergenic
TAAGCAATGAGAGAACACTT+TGG 0.581749 7_1:-79625918 None:intergenic
AATAATTGCCCCAAATCTAG+TGG 0.582700 7_1:+79624951 Msa1041950:CDS
ACATACTGTAATGGGACAAG+TGG 0.583639 7_1:-79626010 None:intergenic
GGTGGCTTTGGCCGCAATGG+CGG 0.587107 7_1:+79624532 Msa1041950:CDS
CTCCCGTTCCTAATTATGAA+GGG 0.591005 7_1:-79635104 None:intergenic
CCCCAAATCTAGTGGTTTAG+GGG 0.592630 7_1:+79624959 Msa1041950:CDS
AGTGTTATCTGGTCCCAACC+AGG 0.596045 7_1:+79628245 Msa1041950:CDS
GCGGCCAAAGCCACCAACAA+AGG 0.599752 7_1:-79624524 None:intergenic
CGCAGCAGTGGATGAACTCG+CGG 0.603450 7_1:-79625321 None:intergenic
GCTCGAATCTTGCAAGACGG+CGG 0.607214 7_1:+79624677 Msa1041950:CDS
ACAAGTGTCATCACAAGGCA+TGG 0.607410 7_1:+79625892 Msa1041950:CDS
TCTCATTGCTTAAAGGGACA+GGG 0.615083 7_1:+79625929 Msa1041950:CDS
TGATCCGGTGTGTTCTTATG+CGG 0.615317 7_1:+79625358 Msa1041950:CDS
TTTAAATCTTCAAAGCATTG+CGG 0.618339 7_1:+79627013 Msa1041950:CDS
ATACCCTTCATAATTAGGAA+CGG 0.625211 7_1:+79635101 Msa1041950:three_prime_UTR
CCCCTAAACCACTAGATTTG+GGG 0.625821 7_1:-79624959 None:intergenic
CCCAACTAAGTAAGGATCGG+AGG 0.631666 7_1:-79624732 None:intergenic
GATCATAAGCTTCTTGAACA+AGG 0.632728 7_1:-79627127 None:intergenic
GATATAACAGACAAAGCACC+AGG 0.635071 7_1:-79625869 None:intergenic
ATACCCAACTAAGTAAGGAT+CGG 0.635525 7_1:-79624735 None:intergenic
GGCGCTCGAATCTTGCAAGA+CGG 0.636787 7_1:+79624674 Msa1041950:CDS
CTTAGCTGTAAATGTCTCTG+TGG 0.642439 7_1:+79634857 Msa1041950:CDS
TCAAGAGAAAGATAACTCCC+CGG 0.649451 7_1:-79624584 None:intergenic
GGTTAACTCACAATCATAGT+CGG 0.650073 7_1:-79634762 None:intergenic
CGTAACCGTCACCGCCATTG+CGG 0.659994 7_1:-79624543 None:intergenic
TATAGGATGGTGCTGCAATG+TGG 0.667848 7_1:+79634321 Msa1041950:intron
CTAGAGGGAATATATCACCT+AGG 0.670693 7_1:-79628360 None:intergenic
GCTCGCGACATAGCTCGTCA+CGG 0.680562 7_1:+79624653 Msa1041950:CDS
TATGTCGCGAGCTTTGAGAG+TGG 0.684708 7_1:-79624642 None:intergenic
ATATCACAAGTGTCATCACA+AGG 0.690052 7_1:+79625887 Msa1041950:CDS
TTTGCAACAGGTAACAATCG+AGG 0.690870 7_1:+79627071 Msa1041950:CDS
CAATTAGTATGTGGAAACTG+CGG 0.692656 7_1:+79635176 Msa1041950:three_prime_UTR
ATTCTTTGGAAAACATACTG+GGG 0.695529 7_1:+79635052 Msa1041950:three_prime_UTR
GTGTAGCACCTATCAGTCTG+GGG 0.699129 7_1:+79625799 Msa1041950:CDS
GGAGAGAACGCTGATGTGTG+AGG 0.705847 7_1:-79634934 None:intergenic
TGGTTGGGACCAGATAACAC+TGG 0.716713 7_1:-79628243 None:intergenic
CACTCATCTGTCCTGCACTG+AGG 0.721081 7_1:-79634905 None:intergenic
GTGTTGTAACTGTAACTCAG+TGG 0.758256 7_1:+79635328 Msa1041950:three_prime_UTR
TGAACCGCATAAGAACACAC+CGG 0.788703 7_1:-79625362 None:intergenic
TTTGGAAAATTGTGACACAG+TGG 0.790362 7_1:-79628200 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTAATAATTTTA+AGG - chr7_1:79628883-79628902 None:intergenic 0.0%
!!! ATATTATTTTAATAATTTTA+AGG - chr7_1:79628883-79628902 None:intergenic 0.0%
!!! ACTATTATATTTTAGATTTA+AGG + chr7_1:79625232-79625251 Msa1041950:intron 10.0%
!!! CTATTATATTTTAGATTTAA+GGG + chr7_1:79625233-79625252 Msa1041950:intron 10.0%
!!! TATTATATTTTAGATTTAAG+GGG + chr7_1:79625234-79625253 Msa1041950:intron 10.0%
!! GATGTAATAAATATTTAAAA+AGG - chr7_1:79626213-79626232 None:intergenic 10.0%
!!! TTTTTTTTTTTCTTTTCTAT+AGG + chr7_1:79628060-79628079 Msa1041950:intron 10.0%
!!! TTTTTTTTTTCTTTTCTATA+GGG + chr7_1:79628061-79628080 Msa1041950:intron 10.0%
!!! TTGATTTTTGAAAAAAAAAA+AGG - chr7_1:79631454-79631473 None:intergenic 10.0%
!! ATTGTTTAATTATATAACTT+CGG + chr7_1:79632339-79632358 Msa1041950:intron 10.0%
!!! ATTTGTTTTAATAATAGCAA+CGG - chr7_1:79624495-79624514 None:intergenic 15.0%
!!! ATTATATTTTAGATTTAAGG+GGG + chr7_1:79625235-79625254 Msa1041950:intron 15.0%
!! TGTTAAAATATAAAATACTG+CGG + chr7_1:79625665-79625684 Msa1041950:intron 15.0%
!! TTTGAATTGAATATAGAAAT+TGG + chr7_1:79626838-79626857 Msa1041950:intron 15.0%
!! TGAAGATTTAAATTATAATG+AGG - chr7_1:79627005-79627024 None:intergenic 15.0%
!! TTATTAAGAAAAAATAGTGA+CGG - chr7_1:79627292-79627311 None:intergenic 15.0%
!! TAAATTACAGTTAATATTTG+CGG - chr7_1:79627914-79627933 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+CGG - chr7_1:79628744-79628763 None:intergenic 15.0%
!!! TTAATAATTTTAAGGAGAAA+TGG - chr7_1:79628875-79628894 None:intergenic 15.0%
!!! AATTACTTCAATTTTTGTTT+AGG + chr7_1:79630933-79630952 Msa1041950:intron 15.0%
!! AAGTTAGATAATTATTTGAA+TGG - chr7_1:79631159-79631178 None:intergenic 15.0%
!! TTTAAAAATTAAGAACTAGT+GGG - chr7_1:79631756-79631775 None:intergenic 15.0%
!!! ACTAGTTCTTAATTTTTAAA+GGG + chr7_1:79631756-79631775 Msa1041950:intron 15.0%
!! TCATATAAATTAGAATTTAG+AGG - chr7_1:79632283-79632302 None:intergenic 15.0%
!! AAAACATAAAAAATTGTTTG+GGG - chr7_1:79632792-79632811 None:intergenic 15.0%
!! CAAAACATAAAAAATTGTTT+GGG - chr7_1:79632793-79632812 None:intergenic 15.0%
!! ACAAAACATAAAAAATTGTT+TGG - chr7_1:79632794-79632813 None:intergenic 15.0%
!! ATTTATCCTTAATGTATTTA+GGG + chr7_1:79632956-79632975 Msa1041950:intron 15.0%
!!! TAATACCATATTAATTTGAA+CGG - chr7_1:79628744-79628763 None:intergenic 15.0%
!!! TTAATAATTTTAAGGAGAAA+TGG - chr7_1:79628875-79628894 None:intergenic 15.0%
!! AAAATCAATACTAAAATTAC+CGG - chr7_1:79634653-79634672 None:intergenic 15.0%
!! AAGAAAGAATGAAATGAATA+GGG - chr7_1:79624424-79624443 None:intergenic 20.0%
!! AAAGAAAGAATGAAATGAAT+AGG - chr7_1:79624425-79624444 None:intergenic 20.0%
!!! TATTTTACTAAAGTGAAGAT+GGG + chr7_1:79624855-79624874 Msa1041950:CDS 20.0%
!!! TAATTAGAAGTTTAGAACAT+GGG + chr7_1:79625082-79625101 Msa1041950:intron 20.0%
!! CTATCAAGCTTAATTATAAT+TGG + chr7_1:79625105-79625124 Msa1041950:intron 20.0%
!! AGATAATAAACCATAAAAGA+TGG + chr7_1:79625191-79625210 Msa1041950:intron 20.0%
!!! TAGGTGAAATTTTGAAATAT+TGG + chr7_1:79625736-79625755 Msa1041950:intron 20.0%
!!! TTGGTTTTAATTGATCTTAT+TGG + chr7_1:79625755-79625774 Msa1041950:intron 20.0%
!!! TGGTTTTAATTGATCTTATT+GGG + chr7_1:79625756-79625775 Msa1041950:intron 20.0%
!! TTAAAGATTAATTGCTTGTT+TGG + chr7_1:79626140-79626159 Msa1041950:intron 20.0%
!!! GTAATGTTTCTAATTTTGTT+TGG + chr7_1:79626327-79626346 Msa1041950:intron 20.0%
!!! AATGTAGAAAATTTTGTTCT+TGG - chr7_1:79626519-79626538 None:intergenic 20.0%
!!! TCAATACAGTATTTTTATGA+AGG + chr7_1:79626541-79626560 Msa1041950:intron 20.0%
!!! CAATACAGTATTTTTATGAA+GGG + chr7_1:79626542-79626561 Msa1041950:intron 20.0%
!! ATTGAATATAGAAATTGGTA+TGG + chr7_1:79626843-79626862 Msa1041950:intron 20.0%
!! ATATTAAGTTCTTAAAATGC+TGG + chr7_1:79626882-79626901 Msa1041950:intron 20.0%
!! TGATAAATAAATTTGGAGAA+CGG - chr7_1:79627245-79627264 None:intergenic 20.0%
!! TTCTCCAAATTTATTTATCA+GGG + chr7_1:79627245-79627264 Msa1041950:intron 20.0%
!! TAAAATAAACTGTAATGACT+TGG + chr7_1:79627309-79627328 Msa1041950:intron 20.0%
!! AAGGTCAGATTATTAATTTA+AGG + chr7_1:79627364-79627383 Msa1041950:intron 20.0%
!! ACAATAAATCATATATACCA+AGG + chr7_1:79627484-79627503 Msa1041950:intron 20.0%
!! GAAATTCAAATTTAACAGTT+TGG - chr7_1:79628462-79628481 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG + chr7_1:79628758-79628777 Msa1041950:intron 20.0%
!! TTCGATAATATATGATTCTA+CGG - chr7_1:79628956-79628975 None:intergenic 20.0%
!! TAGAATCATATATTATCGAA+GGG + chr7_1:79628956-79628975 Msa1041950:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - chr7_1:79629468-79629487 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG - chr7_1:79629469-79629488 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG + chr7_1:79629468-79629487 Msa1041950:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG + chr7_1:79629469-79629488 Msa1041950:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - chr7_1:79629563-79629582 None:intergenic 20.0%
!! TTGTATATTAGCAAATCTTA+TGG - chr7_1:79629649-79629668 None:intergenic 20.0%
!!! TAAGATTTGCTAATATACAA+AGG + chr7_1:79629649-79629668 Msa1041950:intron 20.0%
!! ATTAAGAATCGTTATTACAA+TGG - chr7_1:79630304-79630323 None:intergenic 20.0%
!!! TTTTATATCTTGTACCATTT+AGG + chr7_1:79630570-79630589 Msa1041950:intron 20.0%
!! ACAAAAATTGAAGTAATTCT+TGG - chr7_1:79630931-79630950 None:intergenic 20.0%
!! TTAAAAATTAAGAACTAGTG+GGG - chr7_1:79631755-79631774 None:intergenic 20.0%
!!! CTTTAAAAATTAAGAACTAG+TGG - chr7_1:79631757-79631776 None:intergenic 20.0%
!!! CACTAGTTCTTAATTTTTAA+AGG + chr7_1:79631755-79631774 Msa1041950:intron 20.0%
!!! AACTTTTGATTCATATATCT+TGG + chr7_1:79632302-79632321 Msa1041950:intron 20.0%
!!! ATTTTTAAACTTGAGTAACT+TGG - chr7_1:79632373-79632392 None:intergenic 20.0%
!! TATGCAATAAGGAAAATAAA+TGG - chr7_1:79632618-79632637 None:intergenic 20.0%
!! AAACTTGTAAATATGCAATA+AGG - chr7_1:79632629-79632648 None:intergenic 20.0%
!! TTATTGCATATTTACAAGTT+TGG + chr7_1:79632628-79632647 Msa1041950:intron 20.0%
!! GATTTATCCTTAATGTATTT+AGG + chr7_1:79632955-79632974 Msa1041950:intron 20.0%
!! GAAATTCAAATTTAACAGTT+TGG - chr7_1:79628462-79628481 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG + chr7_1:79628758-79628777 Msa1041950:intron 20.0%
!! TTCGATAATATATGATTCTA+CGG - chr7_1:79628956-79628975 None:intergenic 20.0%
!! TAGAATCATATATTATCGAA+GGG + chr7_1:79628956-79628975 Msa1041950:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - chr7_1:79629468-79629487 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG - chr7_1:79629469-79629488 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG + chr7_1:79629468-79629487 Msa1041950:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG + chr7_1:79629469-79629488 Msa1041950:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - chr7_1:79629563-79629582 None:intergenic 20.0%
!!! ATGCATTACTTGTTTTTTAT+AGG + chr7_1:79634304-79634323 Msa1041950:intron 20.0%
!!! ATTACTTGTTTTTTATAGGA+TGG + chr7_1:79634308-79634327 Msa1041950:intron 20.0%
!! ATACAAAAATCTTATCTTTG+AGG - chr7_1:79634712-79634731 None:intergenic 20.0%
!! TTAAGATTATGACAATGTAA+AGG - chr7_1:79634814-79634833 None:intergenic 20.0%
!! ACATTGTCATAATCTTAAAT+TGG + chr7_1:79634816-79634835 Msa1041950:intron 20.0%
! ACTAAGAATTAATCTTGTTC+AGG + chr7_1:79624829-79624848 Msa1041950:intron 25.0%
!! GTATTTTACTAAAGTGAAGA+TGG + chr7_1:79624854-79624873 Msa1041950:CDS 25.0%
! ATACTGGAAGTGATATATTA+TGG + chr7_1:79624910-79624929 Msa1041950:CDS 25.0%
!! GTAATTAGAAGTTTAGAACA+TGG + chr7_1:79625081-79625100 Msa1041950:intron 25.0%
! AACCATAAAAGATGGTTAAA+AGG + chr7_1:79625199-79625218 Msa1041950:intron 25.0%
! ACCATAAAAGATGGTTAAAA+GGG + chr7_1:79625200-79625219 Msa1041950:intron 25.0%
!!! GGTAATGCTTAATGTTATTT+TGG + chr7_1:79625256-79625275 Msa1041950:intron 25.0%
!! ATGTTATTGATGGTATGATA+GGG + chr7_1:79625570-79625589 Msa1041950:intron 25.0%
! ATATATGAAATCTTGTCACT+AGG + chr7_1:79625717-79625736 Msa1041950:intron 25.0%
! AGTGGAGTATAAACAATATT+TGG - chr7_1:79625995-79626014 None:intergenic 25.0%
! AAAAGAGAACATACTGTAAT+GGG - chr7_1:79626021-79626040 None:intergenic 25.0%
! ATCAATGTGATGCAAAATTA+GGG - chr7_1:79626094-79626113 None:intergenic 25.0%
! TATCAATGTGATGCAAAATT+AGG - chr7_1:79626095-79626114 None:intergenic 25.0%
! TTTGCATCACATTGATATTA+AGG + chr7_1:79626098-79626117 Msa1041950:intron 25.0%
! TTGCATCACATTGATATTAA+GGG + chr7_1:79626099-79626118 Msa1041950:intron 25.0%
!!! CTCGATTACAATTTTTTGAA+AGG + chr7_1:79626397-79626416 Msa1041950:intron 25.0%
! AAACAGTTAGTACAATGAAA+TGG - chr7_1:79626430-79626449 None:intergenic 25.0%
! TTTCATTGTACTAACTGTTT+AGG + chr7_1:79626430-79626449 Msa1041950:intron 25.0%
! TTCATTGTACTAACTGTTTA+GGG + chr7_1:79626431-79626450 Msa1041950:intron 25.0%
! ATTCTTGTTGCAAAAGTAAT+AGG + chr7_1:79626458-79626477 Msa1041950:intron 25.0%
!! TTGCATTCTATTTTCTCTTT+TGG + chr7_1:79626666-79626685 Msa1041950:intron 25.0%
!! TGCATTCTATTTTCTCTTTT+GGG + chr7_1:79626667-79626686 Msa1041950:intron 25.0%
! AAGAAAACAATGCATTGTTA+AGG - chr7_1:79626710-79626729 None:intergenic 25.0%
!! AAAATGAAAATGCATGGTTT+TGG + chr7_1:79626733-79626752 Msa1041950:intron 25.0%
!! ATTAGAACAATTGTGTTGTT+TGG - chr7_1:79626803-79626822 None:intergenic 25.0%
! TTATTTGACAATGGGAATAA+TGG - chr7_1:79626913-79626932 None:intergenic 25.0%
!!! TTTAAATCTTCAAAGCATTG+CGG + chr7_1:79627013-79627032 Msa1041950:CDS 25.0%
! GTTCTCCAAATTTATTTATC+AGG + chr7_1:79627244-79627263 Msa1041950:intron 25.0%
! TGTTCCCTGATAAATAAATT+TGG - chr7_1:79627252-79627271 None:intergenic 25.0%
! TATATGACAAGTCTTCTTTA+TGG + chr7_1:79627452-79627471 Msa1041950:intron 25.0%
! ATATGACAAGTCTTCTTTAT+GGG + chr7_1:79627453-79627472 Msa1041950:intron 25.0%
!!! TTCACAAAACAAAGTTTTGT+GGG - chr7_1:79627568-79627587 None:intergenic 25.0%
!! TTTCACAAAACAAAGTTTTG+TGG - chr7_1:79627569-79627588 None:intergenic 25.0%
!!! AAACTTTGTTTTGTGAAAAC+AGG + chr7_1:79627571-79627590 Msa1041950:intron 25.0%
!!! AACTTTGTTTTGTGAAAACA+GGG + chr7_1:79627572-79627591 Msa1041950:intron 25.0%
! ACTATGATGAAGTTACATTA+AGG + chr7_1:79627686-79627705 Msa1041950:intron 25.0%
! AATGTTTACCTGAAAAATAG+TGG + chr7_1:79627787-79627806 Msa1041950:intron 25.0%
! TTACGTTAACAAAAAAGAAG+TGG + chr7_1:79627931-79627950 Msa1041950:intron 25.0%
!!! ACATCTAGAACTTTTTTTGA+CGG - chr7_1:79627990-79628009 None:intergenic 25.0%
! TGAAATTTAAACTGACTAGA+GGG - chr7_1:79628378-79628397 None:intergenic 25.0%
! ATGAAATTTAAACTGACTAG+AGG - chr7_1:79628379-79628398 None:intergenic 25.0%
! TCTAGTCAGTTTAAATTTCA+TGG + chr7_1:79628378-79628397 Msa1041950:intron 25.0%
! CTAGTCAGTTTAAATTTCAT+GGG + chr7_1:79628379-79628398 Msa1041950:intron 25.0%
!!! GTATCTTATACTGTTGTTTT+TGG + chr7_1:79628432-79628451 Msa1041950:intron 25.0%
!!! ATAATTTTAAGGAGAAATGG+TGG - chr7_1:79628872-79628891 None:intergenic 25.0%
! GTAGAATCATATATTATCGA+AGG + chr7_1:79628955-79628974 Msa1041950:intron 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + chr7_1:79629058-79629077 Msa1041950:intron 25.0%
! GTTTCTTAATTGGATATATC+CGG + chr7_1:79629236-79629255 Msa1041950:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG + chr7_1:79629470-79629489 Msa1041950:intron 25.0%
!! TTTAGAATACACCTATGAAA+AGG - chr7_1:79629778-79629797 None:intergenic 25.0%
! AGTAACATATTGAACCTAAA+TGG - chr7_1:79630587-79630606 None:intergenic 25.0%
! AATATGTGATTGCAAGTTTA+CGG + chr7_1:79630821-79630840 Msa1041950:intron 25.0%
!!! CTGAAATTTTTTGCAATTCA+TGG - chr7_1:79631201-79631220 None:intergenic 25.0%
! CATGAATTGCAAAAAATTTC+AGG + chr7_1:79631199-79631218 Msa1041950:intron 25.0%
! AAAAATCAAATACAACCGAT+TGG + chr7_1:79631465-79631484 Msa1041950:intron 25.0%
! TAAAGAAGTTATATCCTCAT+TGG - chr7_1:79631586-79631605 None:intergenic 25.0%
! ATGAGGATATAACTTCTTTA+AGG + chr7_1:79631586-79631605 Msa1041950:intron 25.0%
! TATGAACTTGGTTTATACAT+TGG - chr7_1:79631628-79631647 None:intergenic 25.0%
! TAAAAATTAAGAACTAGTGG+GGG - chr7_1:79631754-79631773 None:intergenic 25.0%
! CTATGATCACTTTAACATTT+AGG + chr7_1:79631893-79631912 Msa1041950:intron 25.0%
! CGATAAATAACGAAACATAT+AGG - chr7_1:79631927-79631946 None:intergenic 25.0%
!!! TTGTCTTATTTTTCGAACTT+GGG - chr7_1:79632034-79632053 None:intergenic 25.0%
!! AGAATTTTTGTTCTTAGACT+TGG + chr7_1:79632088-79632107 Msa1041950:intron 25.0%
!! GAATTTTTGTTCTTAGACTT+GGG + chr7_1:79632089-79632108 Msa1041950:intron 25.0%
!! TGTAACAAACTAAACTTGTT+TGG + chr7_1:79632811-79632830 Msa1041950:intron 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG + chr7_1:79633029-79633048 Msa1041950:intron 25.0%
!!! ATAATTTTAAGGAGAAATGG+TGG - chr7_1:79628872-79628891 None:intergenic 25.0%
! GTAGAATCATATATTATCGA+AGG + chr7_1:79628955-79628974 Msa1041950:intron 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + chr7_1:79629058-79629077 Msa1041950:intron 25.0%
! GTTTCTTAATTGGATATATC+CGG + chr7_1:79629236-79629255 Msa1041950:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG + chr7_1:79629470-79629489 Msa1041950:intron 25.0%
! ATATGCAATAAAGGAAATGA+TGG - chr7_1:79634786-79634805 None:intergenic 25.0%
!! TGTGCATATAATAGTTTTCA+TGG + chr7_1:79634989-79635008 Msa1041950:CDS 25.0%
! AACATTATCTACAAAAACTG+GGG - chr7_1:79635017-79635036 None:intergenic 25.0%
! GAACATTATCTACAAAAACT+GGG - chr7_1:79635018-79635037 None:intergenic 25.0%
! TGAACATTATCTACAAAAAC+TGG - chr7_1:79635019-79635038 None:intergenic 25.0%
!! TATTCTTTGGAAAACATACT+GGG + chr7_1:79635051-79635070 Msa1041950:three_prime_UTR 25.0%
! AGTCGATGTTTATTTATTGT+CGG + chr7_1:79635077-79635096 Msa1041950:three_prime_UTR 25.0%
ATAGGGAAAACTAAAAAGAG+AGG - chr7_1:79624407-79624426 None:intergenic 30.0%
TGAACGTAAAATTCTTTAGC+AGG - chr7_1:79624885-79624904 None:intergenic 30.0%
! TTTTACGTTCAGATTGATAC+TGG + chr7_1:79624894-79624913 Msa1041950:CDS 30.0%
CCATAAAAGATGGTTAAAAG+GGG + chr7_1:79625201-79625220 Msa1041950:intron 30.0%
!!! TATGTATTTTGACGTGATCA+TGG + chr7_1:79625484-79625503 Msa1041950:CDS 30.0%
!!! ATGTATTTTGACGTGATCAT+GGG + chr7_1:79625485-79625504 Msa1041950:CDS 30.0%
AATCCTCATGATGTTATTGA+TGG + chr7_1:79625560-79625579 Msa1041950:intron 30.0%
ATACCATCAATAACATCATG+AGG - chr7_1:79625566-79625585 None:intergenic 30.0%
! GATGTTATTGATGGTATGAT+AGG + chr7_1:79625569-79625588 Msa1041950:intron 30.0%
GAAAAGAGAACATACTGTAA+TGG - chr7_1:79626022-79626041 None:intergenic 30.0%
ATAGGAGAAGAAAACATTGA+AGG - chr7_1:79626052-79626071 None:intergenic 30.0%
! AATGTTTTCTTCTCCTATCT+CGG + chr7_1:79626054-79626073 Msa1041950:intron 30.0%
! AAAATTTGTTCAACCGAGAT+AGG - chr7_1:79626070-79626089 None:intergenic 30.0%
!! AATCACTCTGAAATTTATCC+AGG + chr7_1:79626173-79626192 Msa1041950:intron 30.0%
!! ATCACTCTGAAATTTATCCA+GGG + chr7_1:79626174-79626193 Msa1041950:intron 30.0%
AGAAACATTACGTAAGCTAA+GGG - chr7_1:79626318-79626337 None:intergenic 30.0%
TAGAAACATTACGTAAGCTA+AGG - chr7_1:79626319-79626338 None:intergenic 30.0%
AGTTAGTACAATGAAATGGA+AGG - chr7_1:79626426-79626445 None:intergenic 30.0%
! AAAATTTTGTTCTTGGCAAG+AGG - chr7_1:79626512-79626531 None:intergenic 30.0%
GATTCACATTCATTTACCAA+GGG - chr7_1:79626628-79626647 None:intergenic 30.0%
CTTAGCAAAATGAAAATGCA+TGG + chr7_1:79626727-79626746 Msa1041950:intron 30.0%
ACTGCAAGTTATTTGACAAT+GGG - chr7_1:79626921-79626940 None:intergenic 30.0%
AACTGCAAGTTATTTGACAA+TGG - chr7_1:79626922-79626941 None:intergenic 30.0%
CAAATACATCTTGATCGATT+GGG - chr7_1:79627055-79627074 None:intergenic 30.0%
GTGTTTCAAAAGTTTAAGAG+AGG - chr7_1:79627182-79627201 None:intergenic 30.0%
CTAGAACATGTTTAATACTG+AGG - chr7_1:79627394-79627413 None:intergenic 30.0%
TAATTGCTTACCTCACAAAT+TGG + chr7_1:79627527-79627546 Msa1041950:intron 30.0%
AATTGCTTACCTCACAAATT+GGG + chr7_1:79627528-79627547 Msa1041950:intron 30.0%
!!! ACTTTGTTTTGTGAAAACAG+GGG + chr7_1:79627573-79627592 Msa1041950:intron 30.0%
AACCATCAATTTAGACAGTA+AGG + chr7_1:79627656-79627675 Msa1041950:intron 30.0%
TCTGTAATAAAGTTCACTCA+TGG - chr7_1:79627753-79627772 None:intergenic 30.0%
CAAGATTCAATGCTATCATT+TGG - chr7_1:79627862-79627881 None:intergenic 30.0%
!!! ATCTAGAACTTTTTTTGACG+GGG - chr7_1:79627988-79628007 None:intergenic 30.0%
!!! CATCTAGAACTTTTTTTGAC+GGG - chr7_1:79627989-79628008 None:intergenic 30.0%
CTAGATGTTACATTATGCAT+TGG + chr7_1:79628002-79628021 Msa1041950:intron 30.0%
!! CACTGATTTACATATCTCAA+CGG + chr7_1:79628162-79628181 Msa1041950:intron 30.0%
! TGGTTTCCTTTGGAAATAAT+GGG - chr7_1:79628226-79628245 None:intergenic 30.0%
AGAATTGAAATAACCTGGTT+GGG - chr7_1:79628261-79628280 None:intergenic 30.0%
TGACATCTCAGAAATCATAA+TGG - chr7_1:79628319-79628338 None:intergenic 30.0%
!! ATGATTTCTGAGATGTCATT+TGG + chr7_1:79628321-79628340 Msa1041950:intron 30.0%
AACAGTATAAGATACTGTTC+TGG - chr7_1:79628427-79628446 None:intergenic 30.0%
AGAATTACACCCTCAAAATA+TGG + chr7_1:79628664-79628683 Msa1041950:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG + chr7_1:79628736-79628755 Msa1041950:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG - chr7_1:79628814-79628833 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG + chr7_1:79628819-79628838 Msa1041950:intron 30.0%
GAATATGAACTTAAGACCAA+GGG + chr7_1:79628978-79628997 Msa1041950:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG - chr7_1:79629160-79629179 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG + chr7_1:79629177-79629196 Msa1041950:intron 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG + chr7_1:79629226-79629245 Msa1041950:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG - chr7_1:79629499-79629518 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG - chr7_1:79629500-79629519 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG - chr7_1:79629529-79629548 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG - chr7_1:79629530-79629549 None:intergenic 30.0%
!!! AAACCATTTTGAAGTCAAGT+GGG - chr7_1:79629604-79629623 None:intergenic 30.0%
ATCTATACTCTATGTTGAGT+GGG - chr7_1:79629943-79629962 None:intergenic 30.0%
! TTAGAGAGTGTATCTCTAAA+TGG - chr7_1:79630246-79630265 None:intergenic 30.0%
AATTCATGGACAAGAAAACA+AGG - chr7_1:79631187-79631206 None:intergenic 30.0%
ACTAGAAGAACAAGTCTATA+TGG - chr7_1:79631230-79631249 None:intergenic 30.0%
!! TCTTCTAGTTCACCATAAAA+AGG + chr7_1:79631241-79631260 Msa1041950:intron 30.0%
! ATGTGAAAGTTGCCTTTTTA+TGG - chr7_1:79631256-79631275 None:intergenic 30.0%
GAGTACTATCGAGTTATAAA+CGG + chr7_1:79631283-79631302 Msa1041950:intron 30.0%
!! ATGGATATGATTTTAGTGAC+TGG + chr7_1:79631329-79631348 Msa1041950:intron 30.0%
AAAAAGGAACTAAAACCTGA+TGG - chr7_1:79631438-79631457 None:intergenic 30.0%
GTCTAACAAAACATGAAACT+TGG - chr7_1:79631515-79631534 None:intergenic 30.0%
! ATTGCTAAAGAGTATGAACT+TGG - chr7_1:79631640-79631659 None:intergenic 30.0%
CTTTAACTAAAGAATAGTGG+GGG - chr7_1:79631835-79631854 None:intergenic 30.0%
CCTTTAACTAAAGAATAGTG+GGG - chr7_1:79631836-79631855 None:intergenic 30.0%
CCCTTTAACTAAAGAATAGT+GGG - chr7_1:79631837-79631856 None:intergenic 30.0%
CCCACTATTCTTTAGTTAAA+GGG + chr7_1:79631834-79631853 Msa1041950:intron 30.0%
CCACTATTCTTTAGTTAAAG+GGG + chr7_1:79631835-79631854 Msa1041950:intron 30.0%
!!! CTTGTCTTATTTTTCGAACT+TGG - chr7_1:79632035-79632054 None:intergenic 30.0%
GTTCGAAAAATAAGACAAGT+TGG + chr7_1:79632036-79632055 Msa1041950:intron 30.0%
! TTATTGATGACTGTGAACTT+TGG - chr7_1:79632179-79632198 None:intergenic 30.0%
CACACAACTAATAACATAGA+AGG + chr7_1:79632438-79632457 Msa1041950:intron 30.0%
TAAACATTGATATCACGTTC+TGG - chr7_1:79632709-79632728 None:intergenic 30.0%
!!! GCAAGGTTGTTATTTTGTTA+TGG - chr7_1:79632753-79632772 None:intergenic 30.0%
ACATAAAAAATTGTTTGGGG+CGG - chr7_1:79632789-79632808 None:intergenic 30.0%
AGTTGTCCCTAAATACATTA+AGG - chr7_1:79632965-79632984 None:intergenic 30.0%
AGAATTACACCCTCAAAATA+TGG + chr7_1:79628664-79628683 Msa1041950:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG + chr7_1:79628736-79628755 Msa1041950:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG - chr7_1:79628814-79628833 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG + chr7_1:79628819-79628838 Msa1041950:intron 30.0%
GAATATGAACTTAAGACCAA+GGG + chr7_1:79628978-79628997 Msa1041950:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG - chr7_1:79629160-79629179 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG + chr7_1:79629177-79629196 Msa1041950:intron 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG + chr7_1:79629226-79629245 Msa1041950:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG - chr7_1:79629499-79629518 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG - chr7_1:79629500-79629519 None:intergenic 30.0%
CTATGAAAAAACTAGTGTGT+GGG - chr7_1:79629529-79629548 None:intergenic 30.0%
ACTATGAAAAAACTAGTGTG+TGG - chr7_1:79629530-79629549 None:intergenic 30.0%
GTGTTCCAACATATACATTA+TGG + chr7_1:79634183-79634202 Msa1041950:intron 30.0%
GGAAACCATAATGTATATGT+TGG - chr7_1:79634191-79634210 None:intergenic 30.0%
ACATATACATTATGGTTTCC+TGG + chr7_1:79634191-79634210 Msa1041950:intron 30.0%
! ATTTTTCTTCTTGCCTAAGT+AGG + chr7_1:79634242-79634261 Msa1041950:intron 30.0%
TCTCTCGTTTGATTATGATA+CGG + chr7_1:79634456-79634475 Msa1041950:intron 30.0%
AGACATATCCACTATTCAAT+AGG - chr7_1:79634579-79634598 None:intergenic 30.0%
! AGATCATTACTCTTGTTATC+CGG + chr7_1:79634631-79634650 Msa1041950:intron 30.0%
! AAGGAGCATATATGCAATAA+AGG - chr7_1:79634795-79634814 None:intergenic 30.0%
! CTATTCTTTGGAAAACATAC+TGG + chr7_1:79635050-79635069 Msa1041950:three_prime_UTR 30.0%
! ATTCTTTGGAAAACATACTG+GGG + chr7_1:79635052-79635071 Msa1041950:three_prime_UTR 30.0%
ATACCCTTCATAATTAGGAA+CGG + chr7_1:79635101-79635120 Msa1041950:three_prime_UTR 30.0%
! ATCTTTTCCCAATTAGTATG+TGG + chr7_1:79635167-79635186 Msa1041950:three_prime_UTR 30.0%
!! TGATATACTTCTGAAGTTGA+TGG + chr7_1:79635248-79635267 Msa1041950:three_prime_UTR 30.0%
AGTTACAACACAACATTGAT+TGG - chr7_1:79635319-79635338 None:intergenic 30.0%
GTTATATGTATACTTGCTCT+TGG + chr7_1:79635385-79635404 Msa1041950:three_prime_UTR 30.0%
AGCAACGGTAATGTAATAGA+TGG - chr7_1:79624480-79624499 None:intergenic 35.0%
ATACCCAACTAAGTAAGGAT+CGG - chr7_1:79624738-79624757 None:intergenic 35.0%
GCATGAAGATTGAGAAAGAA+TGG - chr7_1:79624762-79624781 None:intergenic 35.0%
CTCAATCTTCATGCATTCTT+TGG + chr7_1:79624768-79624787 Msa1041950:intron 35.0%
AATAATTGCCCCAAATCTAG+TGG + chr7_1:79624951-79624970 Msa1041950:CDS 35.0%
! CCCCTTTTAACCATCTTTTA+TGG - chr7_1:79625204-79625223 None:intergenic 35.0%
!! TCTTCATCTACCGTTGTTTT+TGG + chr7_1:79625527-79625546 Msa1041950:CDS 35.0%
!!! CTTCATCTACCGTTGTTTTT+GGG + chr7_1:79625528-79625547 Msa1041950:CDS 35.0%
CAATAACATCATGAGGATTG+AGG - chr7_1:79625559-79625578 None:intergenic 35.0%
TCTTATTGGGATGATTGTTC+TGG + chr7_1:79625769-79625788 Msa1041950:intron 35.0%
!! GGATGATTGTTCTGGAAAAT+AGG + chr7_1:79625777-79625796 Msa1041950:intron 35.0%
!!! AAGGCAGTTGATGGAATTTT+TGG + chr7_1:79625839-79625858 Msa1041950:CDS 35.0%
!!! AGGCAGTTGATGGAATTTTT+GGG + chr7_1:79625840-79625859 Msa1041950:CDS 35.0%
!!! GTTGATGGAATTTTTGGGTT+TGG + chr7_1:79625845-79625864 Msa1041950:CDS 35.0%
ATATCACAAGTGTCATCACA+AGG + chr7_1:79625887-79625906 Msa1041950:CDS 35.0%
AAGCAATGAGAGAACACTTT+GGG - chr7_1:79625920-79625939 None:intergenic 35.0%
TAAGCAATGAGAGAACACTT+TGG - chr7_1:79625921-79625940 None:intergenic 35.0%
AGTGTTCTCTCATTGCTTAA+AGG + chr7_1:79625922-79625941 Msa1041950:CDS 35.0%
GTGTTCTCTCATTGCTTAAA+GGG + chr7_1:79625923-79625942 Msa1041950:CDS 35.0%
!! ACTGGTTCTTGGTGAAATTT+TGG + chr7_1:79625967-79625986 Msa1041950:CDS 35.0%
!! GAAACATAAAGCACTGTTAG+TGG + chr7_1:79626248-79626267 Msa1041950:intron 35.0%
TGGTACTGTAAATCGATGTT+TGG + chr7_1:79626347-79626366 Msa1041950:intron 35.0%
TGTTGCAAAAGTAATAGGTC+TGG + chr7_1:79626463-79626482 Msa1041950:intron 35.0%
GTTGCAAAAGTAATAGGTCT+GGG + chr7_1:79626464-79626483 Msa1041950:intron 35.0%
GTCTGGGTATTTGTATGTTT+GGG + chr7_1:79626480-79626499 Msa1041950:intron 35.0%
AAGAAACCAACATCTGTGTT+AGG - chr7_1:79626586-79626605 None:intergenic 35.0%
GGATTCACATTCATTTACCA+AGG - chr7_1:79626629-79626648 None:intergenic 35.0%
TGGTAAATGAATGTGAATCC+TGG + chr7_1:79626629-79626648 Msa1041950:intron 35.0%
GCAAATACATCTTGATCGAT+TGG - chr7_1:79627056-79627075 None:intergenic 35.0%
GATCAAGATGTATTTGCAAC+AGG + chr7_1:79627059-79627078 Msa1041950:CDS 35.0%
! CGAGGAACTATAATTGATTC+CGG + chr7_1:79627089-79627108 Msa1041950:CDS 35.0%
! AATTGATTCCGGTACTACAT+TGG + chr7_1:79627100-79627119 Msa1041950:CDS 35.0%
GATCATAAGCTTCTTGAACA+AGG - chr7_1:79627130-79627149 None:intergenic 35.0%
! GAACTTACAGCATTGAGAAA+AGG - chr7_1:79627152-79627171 None:intergenic 35.0%
! CTGTAATGACTTGGAGTAAT+AGG + chr7_1:79627318-79627337 Msa1041950:intron 35.0%
ATTGCTTACCTCACAAATTG+GGG + chr7_1:79627529-79627548 Msa1041950:intron 35.0%
AAAATACTCCCCAATTTGTG+AGG - chr7_1:79627540-79627559 None:intergenic 35.0%
AGTTGAAGTGTGTGAAAAAG+TGG - chr7_1:79627607-79627626 None:intergenic 35.0%
CTCCTTACTGTCTAAATTGA+TGG - chr7_1:79627661-79627680 None:intergenic 35.0%
GTAGCAGAAACATTAGAAAG+GGG - chr7_1:79627814-79627833 None:intergenic 35.0%
GGTAGCAGAAACATTAGAAA+GGG - chr7_1:79627815-79627834 None:intergenic 35.0%
TGGTAGCAGAAACATTAGAA+AGG - chr7_1:79627816-79627835 None:intergenic 35.0%
! TTTCTAATGTTTCTGCTACC+AGG + chr7_1:79627815-79627834 Msa1041950:intron 35.0%
ATGCTATCATTTGGACTCTT+GGG - chr7_1:79627853-79627872 None:intergenic 35.0%
AATGCTATCATTTGGACTCT+TGG - chr7_1:79627854-79627873 None:intergenic 35.0%
AGATATGTAAATCAGTGCAC+GGG - chr7_1:79628159-79628178 None:intergenic 35.0%
GAGATATGTAAATCAGTGCA+CGG - chr7_1:79628160-79628179 None:intergenic 35.0%
TTTGGAAAATTGTGACACAG+TGG - chr7_1:79628203-79628222 None:intergenic 35.0%
TCCAAACCCATTATTTCCAA+AGG + chr7_1:79628217-79628236 Msa1041950:CDS 35.0%
!! TCCTTTGGAAATAATGGGTT+TGG - chr7_1:79628221-79628240 None:intergenic 35.0%
! CTGGTTTCCTTTGGAAATAA+TGG - chr7_1:79628227-79628246 None:intergenic 35.0%
GAGAATTGAAATAACCTGGT+TGG - chr7_1:79628262-79628281 None:intergenic 35.0%
GTCAGAGAATTGAAATAACC+TGG - chr7_1:79628266-79628285 None:intergenic 35.0%
GTCAGTTTAAATTTCATGGG+TGG + chr7_1:79628382-79628401 Msa1041950:intron 35.0%
!!! CTGTTCTGGTTTTAAAACCA+TGG - chr7_1:79628413-79628432 None:intergenic 35.0%
CTTCGGTAGATGATAGAATT+TGG - chr7_1:79628484-79628503 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG - chr7_1:79628501-79628520 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG - chr7_1:79628618-79628637 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG - chr7_1:79628676-79628695 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG - chr7_1:79628677-79628696 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG - chr7_1:79628811-79628830 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG - chr7_1:79628828-79628847 None:intergenic 35.0%
GGAATATGAACTTAAGACCA+AGG + chr7_1:79628977-79628996 Msa1041950:intron 35.0%
AAGAACACTCTTAATACCGA+AGG + chr7_1:79629012-79629031 Msa1041950:intron 35.0%
AGAACACTCTTAATACCGAA+GGG + chr7_1:79629013-79629032 Msa1041950:intron 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + chr7_1:79629061-79629080 Msa1041950:intron 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + chr7_1:79629062-79629081 Msa1041950:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + chr7_1:79629107-79629126 Msa1041950:intron 35.0%
! TTTCGGTGCAAAGAATCAAA+TGG + chr7_1:79629124-79629143 Msa1041950:intron 35.0%
! TTCGGTGCAAAGAATCAAAT+GGG + chr7_1:79629125-79629144 Msa1041950:intron 35.0%
GTAACAAAAAACGAGTGACT+TGG + chr7_1:79629176-79629195 Msa1041950:intron 35.0%
AACAAAAAACGAGTGACTTG+GGG + chr7_1:79629178-79629197 Msa1041950:intron 35.0%
AAACAAAACGCGTTTGCTTA+AGG - chr7_1:79629220-79629239 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG - chr7_1:79629258-79629277 None:intergenic 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG + chr7_1:79629258-79629277 Msa1041950:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG + chr7_1:79629263-79629282 Msa1041950:intron 35.0%
!!! AACCATTTTGAAGTCAAGTG+GGG - chr7_1:79629603-79629622 None:intergenic 35.0%
!!! GAAACCATTTTGAAGTCAAG+TGG - chr7_1:79629605-79629624 None:intergenic 35.0%
!! TATGCTAAGGTTCAAGTTGT+TGG - chr7_1:79629680-79629699 None:intergenic 35.0%
TCTATACTCTATGTTGAGTG+GGG - chr7_1:79629942-79629961 None:intergenic 35.0%
GATCTATACTCTATGTTGAG+TGG - chr7_1:79629944-79629963 None:intergenic 35.0%
GGTAAAAACAAGTCATGAAG+TGG - chr7_1:79630048-79630067 None:intergenic 35.0%
! TACCCATTGAACCTATTTCT+TGG + chr7_1:79630064-79630083 Msa1041950:intron 35.0%
! ACCCATTGAACCTATTTCTT+GGG + chr7_1:79630065-79630084 Msa1041950:intron 35.0%
TCCCAAGAAATAGGTTCAAT+GGG - chr7_1:79630069-79630088 None:intergenic 35.0%
ATCCCAAGAAATAGGTTCAA+TGG - chr7_1:79630070-79630089 None:intergenic 35.0%
CTATTAAGTCCTTTCGTCAA+AGG + chr7_1:79630174-79630193 Msa1041950:intron 35.0%
ATGGTAAGAGACGATAGATA+AGG - chr7_1:79630285-79630304 None:intergenic 35.0%
AAACTAGTGAAGAAGCAAGT+TGG - chr7_1:79630417-79630436 None:intergenic 35.0%
ATCTCAGATTCATTCCATAG+TGG + chr7_1:79630451-79630470 Msa1041950:intron 35.0%
!! GACTCTAAGATTACTTCACT+AGG - chr7_1:79630610-79630629 None:intergenic 35.0%
TCATGACTCTTTCTATAGCA+TGG + chr7_1:79630639-79630658 Msa1041950:intron 35.0%
TGTGCAAGTTTACTAGTAGA+CGG - chr7_1:79630678-79630697 None:intergenic 35.0%
GTCGGATTTAATACATTCAG+TGG + chr7_1:79630720-79630739 Msa1041950:intron 35.0%
ACAGAATATACGAGCATCAT+TGG - chr7_1:79630761-79630780 None:intergenic 35.0%
AAGTGTAAGAACACTTGAGA+TGG - chr7_1:79630794-79630813 None:intergenic 35.0%
ATCTCAAGTGTTCTTACACT+TGG + chr7_1:79630793-79630812 Msa1041950:intron 35.0%
AAAATTTCATGCCATTCCTC+AGG + chr7_1:79631121-79631140 Msa1041950:intron 35.0%
CTAAATAAACTCCTGAGGAA+TGG - chr7_1:79631135-79631154 None:intergenic 35.0%
ATGGTCTAAATAAACTCCTG+AGG - chr7_1:79631140-79631159 None:intergenic 35.0%
TAACTCGATAGTACTCCAAA+AGG - chr7_1:79631279-79631298 None:intergenic 35.0%
TACTATCGAGTTATAAACGG+CGG + chr7_1:79631286-79631305 Msa1041950:intron 35.0%
! TAAAGGGACTAGTACTCTTA+TGG + chr7_1:79631310-79631329 Msa1041950:intron 35.0%
! GTCTAAAACCTTTGACTACA+AGG + chr7_1:79631388-79631407 Msa1041950:intron 35.0%
CTCATAGTTGCAAAACCAAT+CGG - chr7_1:79631483-79631502 None:intergenic 35.0%
CAAGATGTTATAGAACCTCA+AGG - chr7_1:79631679-79631698 None:intergenic 35.0%
CCCCACTATTCTTTAGTTAA+AGG + chr7_1:79631833-79631852 Msa1041950:intron 35.0%
CCCCTTTAACTAAAGAATAG+TGG - chr7_1:79631838-79631857 None:intergenic 35.0%
CCTATGAATGTGTATTCATC+GGG - chr7_1:79631954-79631973 None:intergenic 35.0%
GCCTATGAATGTGTATTCAT+CGG - chr7_1:79631955-79631974 None:intergenic 35.0%
ACTAGTAAGTTCAACTCTCT+TGG + chr7_1:79631978-79631997 Msa1041950:intron 35.0%
CTAGTAAGTTCAACTCTCTT+GGG + chr7_1:79631979-79631998 Msa1041950:intron 35.0%
TAGTAAGTTCAACTCTCTTG+GGG + chr7_1:79631980-79631999 Msa1041950:intron 35.0%
TCTGGACTATATTAAGATCC+TGG - chr7_1:79632007-79632026 None:intergenic 35.0%
GGAAAAAGATTGCACTTTGA+TGG - chr7_1:79632484-79632503 None:intergenic 35.0%
GCGGAAAATAAAATAACGCA+AGG - chr7_1:79632770-79632789 None:intergenic 35.0%
ACCTCAATAAGTAACTTCTC+CGG + chr7_1:79632987-79633006 Msa1041950:intron 35.0%
TTTCGATATGCTATGTCTAC+CGG - chr7_1:79633009-79633028 None:intergenic 35.0%
CTTCGGTAGATGATAGAATT+TGG - chr7_1:79628484-79628503 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG - chr7_1:79628501-79628520 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG - chr7_1:79628618-79628637 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG - chr7_1:79628676-79628695 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG - chr7_1:79628677-79628696 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG - chr7_1:79628811-79628830 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG - chr7_1:79628828-79628847 None:intergenic 35.0%
GGAATATGAACTTAAGACCA+AGG + chr7_1:79628977-79628996 Msa1041950:intron 35.0%
AAGAACACTCTTAATACCGA+AGG + chr7_1:79629012-79629031 Msa1041950:intron 35.0%
AGAACACTCTTAATACCGAA+GGG + chr7_1:79629013-79629032 Msa1041950:intron 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + chr7_1:79629061-79629080 Msa1041950:intron 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + chr7_1:79629062-79629081 Msa1041950:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + chr7_1:79629107-79629126 Msa1041950:intron 35.0%
! TTTCGGTGCAAAGAATCAAA+TGG + chr7_1:79629124-79629143 Msa1041950:intron 35.0%
! TTCGGTGCAAAGAATCAAAT+GGG + chr7_1:79629125-79629144 Msa1041950:intron 35.0%
GTAACAAAAAACGAGTGACT+TGG + chr7_1:79629176-79629195 Msa1041950:intron 35.0%
AACAAAAAACGAGTGACTTG+GGG + chr7_1:79629178-79629197 Msa1041950:intron 35.0%
AAACAAAACGCGTTTGCTTA+AGG - chr7_1:79629220-79629239 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG - chr7_1:79629258-79629277 None:intergenic 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG + chr7_1:79629258-79629277 Msa1041950:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG + chr7_1:79629263-79629282 Msa1041950:intron 35.0%
AAGAGAAAGACATAGTTACC+AGG - chr7_1:79634212-79634231 None:intergenic 35.0%
ATGCATCAGACAATTATCAG+TGG - chr7_1:79634290-79634309 None:intergenic 35.0%
! CAGAAGGGATACACAATTTT+AGG + chr7_1:79634365-79634384 Msa1041950:CDS 35.0%
CTCTCGTTTGATTATGATAC+GGG + chr7_1:79634457-79634476 Msa1041950:intron 35.0%
TATTCAATAGGCCCACAAAT+GGG - chr7_1:79634567-79634586 None:intergenic 35.0%
GACTTAGCTAATCAACGAAT+TGG + chr7_1:79634734-79634753 Msa1041950:CDS 35.0%
TAGCTAATCAACGAATTGGA+TGG + chr7_1:79634738-79634757 Msa1041950:CDS 35.0%
GGTTAACTCACAATCATAGT+CGG - chr7_1:79634765-79634784 None:intergenic 35.0%
AATCCTTACAAGTTGCAACT+TGG - chr7_1:79634958-79634977 None:intergenic 35.0%
AAGAGTCGAAAGCTATTCTT+TGG + chr7_1:79635038-79635057 Msa1041950:three_prime_UTR 35.0%
TACCCTTCATAATTAGGAAC+GGG + chr7_1:79635102-79635121 Msa1041950:three_prime_UTR 35.0%
GCAGTTTCCACATACTAATT+GGG - chr7_1:79635177-79635196 None:intergenic 35.0%
CAATTAGTATGTGGAAACTG+CGG + chr7_1:79635176-79635195 Msa1041950:three_prime_UTR 35.0%
GTTTATAGTCTGACATCAGA+TGG - chr7_1:79635412-79635431 None:intergenic 35.0%
AAATATGCGCGTTCCTTTGT+TGG + chr7_1:79624511-79624530 Msa1041950:exon 40.0%
TCAAGAGAAAGATAACTCCC+CGG - chr7_1:79624587-79624606 None:intergenic 40.0%
! GTTCAACTTGGTGGTTAAGA+GGG - chr7_1:79624619-79624638 None:intergenic 40.0%
! AGTTCAACTTGGTGGTTAAG+AGG - chr7_1:79624620-79624639 None:intergenic 40.0%
ATTCTTGACTTCTCAGTCCA+AGG + chr7_1:79624707-79624726 Msa1041950:CDS 40.0%
ATGGCATACCCAACTAAGTA+AGG - chr7_1:79624743-79624762 None:intergenic 40.0%
ACCCCTAAACCACTAGATTT+GGG - chr7_1:79624963-79624982 None:intergenic 40.0%
CGCTCTGCAGTAAATAGTAA+GGG - chr7_1:79625051-79625070 None:intergenic 40.0%
TCGCTCTGCAGTAAATAGTA+AGG - chr7_1:79625052-79625071 None:intergenic 40.0%
GTGTTCTTATGCGGTTCAAA+CGG + chr7_1:79625367-79625386 Msa1041950:CDS 40.0%
! TGCAGCTACACTTTTCAGTA+TGG + chr7_1:79625422-79625441 Msa1041950:CDS 40.0%
! GCAGCTACACTTTTCAGTAT+GGG + chr7_1:79625423-79625442 Msa1041950:CDS 40.0%
! CAGCTACACTTTTCAGTATG+GGG + chr7_1:79625424-79625443 Msa1041950:CDS 40.0%
! TACACTTTTCAGTATGGGGA+TGG + chr7_1:79625428-79625447 Msa1041950:CDS 40.0%
! GATATAACAGACAAAGCACC+AGG - chr7_1:79625872-79625891 None:intergenic 40.0%
TCTCATTGCTTAAAGGGACA+GGG + chr7_1:79625929-79625948 Msa1041950:CDS 40.0%
! ACATACTGTAATGGGACAAG+TGG - chr7_1:79626013-79626032 None:intergenic 40.0%
AAGGATGCAAATACTTTCCC+TGG - chr7_1:79626194-79626213 None:intergenic 40.0%
! AAGCTAAGGGTACAAAATGG+TGG - chr7_1:79626305-79626324 None:intergenic 40.0%
! CGTAAGCTAAGGGTACAAAA+TGG - chr7_1:79626308-79626327 None:intergenic 40.0%
GGTCTGGGTATTTGTATGTT+TGG + chr7_1:79626479-79626498 Msa1041950:intron 40.0%
!! AAGGGTATCAGAGAAGAACA+TGG - chr7_1:79626610-79626629 None:intergenic 40.0%
ATGTTCTTCTCTGATACCCT+TGG + chr7_1:79626609-79626628 Msa1041950:intron 40.0%
GCAAATGCTTTACTACTTCC+AGG - chr7_1:79626650-79626669 None:intergenic 40.0%
ACAATGCATTGTTAAGGCCA+GGG - chr7_1:79626704-79626723 None:intergenic 40.0%
AACAATGCATTGTTAAGGCC+AGG - chr7_1:79626705-79626724 None:intergenic 40.0%
GTCTTATCAGACATAATGCC+TGG + chr7_1:79626961-79626980 Msa1041950:intron 40.0%
TTTGCAACAGGTAACAATCG+AGG + chr7_1:79627071-79627090 Msa1041950:CDS 40.0%
AAGGTATGCCAATGTAGTAC+CGG - chr7_1:79627111-79627130 None:intergenic 40.0%
! GCTTTTCTGTCTCAATCAGA+AGG + chr7_1:79627345-79627364 Msa1041950:intron 40.0%
ATATGTCCAATCCGCAAAGA+CGG + chr7_1:79627420-79627439 Msa1041950:intron 40.0%
TAGACCTTAAACCGTCTTTG+CGG - chr7_1:79627434-79627453 None:intergenic 40.0%
AAGTGTGTGAAAAAGTGGCA+AGG - chr7_1:79627602-79627621 None:intergenic 40.0%
!! AAAGGGGTCCACTATTTTTC+AGG - chr7_1:79627798-79627817 None:intergenic 40.0%
CTGCAACGTAAATCAATGTC+TGG + chr7_1:79627956-79627975 Msa1041950:intron 40.0%
CTATAGGGTGTGTTTAACAG+AGG + chr7_1:79628076-79628095 Msa1041950:intron 40.0%
!! CAGATAACACTGGTTTCCTT+TGG - chr7_1:79628236-79628255 None:intergenic 40.0%
CAAAGGAAACCAGTGTTATC+TGG + chr7_1:79628234-79628253 Msa1041950:CDS 40.0%
! GATTTTTGCTCATTCAGCCT+AGG + chr7_1:79628343-79628362 Msa1041950:intron 40.0%
CTAGAGGGAATATATCACCT+AGG - chr7_1:79628363-79628382 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG + chr7_1:79628492-79628511 Msa1041950:intron 40.0%
AGTCTACCTTGCACAACTTT+GGG - chr7_1:79628564-79628583 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG - chr7_1:79628565-79628584 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - chr7_1:79628619-79628638 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG - chr7_1:79628729-79628748 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG - chr7_1:79628770-79628789 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG - chr7_1:79628792-79628811 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - chr7_1:79628853-79628872 None:intergenic 40.0%
AACTTAAGACCAAGGGACTA+TGG + chr7_1:79628985-79629004 Msa1041950:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG - chr7_1:79628997-79629016 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG + chr7_1:79629022-79629041 Msa1041950:intron 40.0%
GAGAAGAGAGGAAAAAACAC+AGG + chr7_1:79629084-79629103 Msa1041950:intron 40.0%
TCGGTGCAAAGAATCAAATG+GGG + chr7_1:79629126-79629145 Msa1041950:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG + chr7_1:79629246-79629265 Msa1041950:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG + chr7_1:79629264-79629283 Msa1041950:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG + chr7_1:79629409-79629428 Msa1041950:intron 40.0%
!!! ACCATTTTGAAGTCAAGTGG+GGG - chr7_1:79629602-79629621 None:intergenic 40.0%
CAACTTGAACCTTAGCATAG+TGG + chr7_1:79629681-79629700 Msa1041950:intron 40.0%
! TTGAACCTTAGCATAGTGGA+AGG + chr7_1:79629685-79629704 Msa1041950:intron 40.0%
GAATACCTTCCACTATGCTA+AGG - chr7_1:79629693-79629712 None:intergenic 40.0%
CCTATGAAAAGGTTTGTGTG+TGG - chr7_1:79629767-79629786 None:intergenic 40.0%
! CCACACACAAACCTTTTCAT+AGG + chr7_1:79629764-79629783 Msa1041950:intron 40.0%
! CTAGAGCATTCGTTAAAACC+GGG - chr7_1:79629833-79629852 None:intergenic 40.0%
! CCTAGAGCATTCGTTAAAAC+CGG - chr7_1:79629834-79629853 None:intergenic 40.0%
ATTCTGCCTCGAAATTCCAT+AGG + chr7_1:79629855-79629874 Msa1041950:intron 40.0%
CCTATACGAATGTGGAACTT+AGG - chr7_1:79629886-79629905 None:intergenic 40.0%
CCTAAGTTCCACATTCGTAT+AGG + chr7_1:79629883-79629902 Msa1041950:intron 40.0%
TAGACTCACCTATACGAATG+TGG - chr7_1:79629894-79629913 None:intergenic 40.0%
TCGTATAGGTGAGTCTATCA+AGG + chr7_1:79629897-79629916 Msa1041950:intron 40.0%
CGTATAGGTGAGTCTATCAA+GGG + chr7_1:79629898-79629917 Msa1041950:intron 40.0%
CAAGAAACATCCAGTAGGAT+GGG - chr7_1:79630144-79630163 None:intergenic 40.0%
AAGTCCAAGAAACATCCAGT+AGG - chr7_1:79630149-79630168 None:intergenic 40.0%
TTAGCTGATCCTTTGACGAA+AGG - chr7_1:79630186-79630205 None:intergenic 40.0%
GAGTGTATCTCTAAATGGAG+CGG - chr7_1:79630241-79630260 None:intergenic 40.0%
CTTAATCTTTGCAATAGCCG+CGG + chr7_1:79630318-79630337 Msa1041950:intron 40.0%
AATTCATTGCGATAGTACCG+CGG - chr7_1:79630338-79630357 None:intergenic 40.0%
TCGCAATGAATTAACACAGC+CGG + chr7_1:79630346-79630365 Msa1041950:intron 40.0%
TGAATTAACACAGCCGGTAA+CGG + chr7_1:79630352-79630371 Msa1041950:intron 40.0%
!! GATATTGACTCAGTCCACTA+TGG - chr7_1:79630468-79630487 None:intergenic 40.0%
CAAGTTTACTAGTAGACGGA+TGG - chr7_1:79630674-79630693 None:intergenic 40.0%
TTTCACGACATCGACAATGT+CGG + chr7_1:79630702-79630721 Msa1041950:intron 40.0%
! AGGCAACTTTCACATCCTTT+TGG + chr7_1:79631261-79631280 Msa1041950:intron 40.0%
AGTTATAAACGGCGGCTAAA+GGG + chr7_1:79631294-79631313 Msa1041950:intron 40.0%
AAGGCTTTCCTTGTAGTCAA+AGG - chr7_1:79631399-79631418 None:intergenic 40.0%
!! TGGTACGGTTGATGAATACA+AGG - chr7_1:79631418-79631437 None:intergenic 40.0%
TATTCATCAACCGTACCATC+AGG + chr7_1:79631420-79631439 Msa1041950:intron 40.0%
GGAACTAAAACCTGATGGTA+CGG - chr7_1:79631433-79631452 None:intergenic 40.0%
CCTCATTGGATGCTGAATTA+TGG - chr7_1:79631572-79631591 None:intergenic 40.0%
CCATAATTCAGCATCCAATG+AGG + chr7_1:79631569-79631588 Msa1041950:intron 40.0%
! TTAGCTTTCTTACCTCCTTG+AGG + chr7_1:79631661-79631680 Msa1041950:intron 40.0%
GATGTTATAGAACCTCAAGG+AGG - chr7_1:79631676-79631695 None:intergenic 40.0%
CCCGATGAATACACATTCAT+AGG + chr7_1:79631951-79631970 Msa1041950:intron 40.0%
! TTTTCGAACTTGGGATTGTC+TGG - chr7_1:79632025-79632044 None:intergenic 40.0%
!! TCTTTTTCCACAAGAGTGCA+TGG + chr7_1:79632495-79632514 Msa1041950:intron 40.0%
ACCGGAGAAGTTACTTATTG+AGG - chr7_1:79632991-79633010 None:intergenic 40.0%
CATCTACCGAAGTTGTTACT+AGG + chr7_1:79628492-79628511 Msa1041950:intron 40.0%
AGTCTACCTTGCACAACTTT+GGG - chr7_1:79628564-79628583 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG - chr7_1:79628565-79628584 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - chr7_1:79628619-79628638 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG - chr7_1:79628729-79628748 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG - chr7_1:79628770-79628789 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG - chr7_1:79628792-79628811 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - chr7_1:79628853-79628872 None:intergenic 40.0%
AACTTAAGACCAAGGGACTA+TGG + chr7_1:79628985-79629004 Msa1041950:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG - chr7_1:79628997-79629016 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG + chr7_1:79629022-79629041 Msa1041950:intron 40.0%
GAGAAGAGAGGAAAAAACAC+AGG + chr7_1:79629084-79629103 Msa1041950:intron 40.0%
TCGGTGCAAAGAATCAAATG+GGG + chr7_1:79629126-79629145 Msa1041950:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG + chr7_1:79629246-79629265 Msa1041950:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG + chr7_1:79629264-79629283 Msa1041950:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG + chr7_1:79629409-79629428 Msa1041950:intron 40.0%
! TGGTTTCCAAAAAGTGCAGA+AGG + chr7_1:79634349-79634368 Msa1041950:CDS 40.0%
! GGTTTCCAAAAAGTGCAGAA+GGG + chr7_1:79634350-79634369 Msa1041950:CDS 40.0%
! TGTATCCCTTCTGCACTTTT+TGG - chr7_1:79634358-79634377 None:intergenic 40.0%
AGCACCATGTTGCTCTTAAA+GGG - chr7_1:79634497-79634516 None:intergenic 40.0%
TAGCACCATGTTGCTCTTAA+AGG - chr7_1:79634498-79634517 None:intergenic 40.0%
!! AACATGGTGCTATACAGTTC+CGG + chr7_1:79634506-79634525 Msa1041950:intron 40.0%
CTATTCAATAGGCCCACAAA+TGG - chr7_1:79634568-79634587 None:intergenic 40.0%
TTTGTGGGCCTATTGAATAG+TGG + chr7_1:79634568-79634587 Msa1041950:intron 40.0%
CACAGAGACATTTACAGCTA+AGG - chr7_1:79634859-79634878 None:intergenic 40.0%
CTTAGCTGTAAATGTCTCTG+TGG + chr7_1:79634857-79634876 Msa1041950:CDS 40.0%
TCTCCAAGTTGCAACTTGTA+AGG + chr7_1:79634952-79634971 Msa1041950:CDS 40.0%
GTTGCAACTTGTAAGGATTG+TGG + chr7_1:79634959-79634978 Msa1041950:CDS 40.0%
TCGGCATACCCTTCATAATT+AGG + chr7_1:79635096-79635115 Msa1041950:three_prime_UTR 40.0%
CTCCCGTTCCTAATTATGAA+GGG - chr7_1:79635107-79635126 None:intergenic 40.0%
ACTCCCGTTCCTAATTATGA+AGG - chr7_1:79635108-79635127 None:intergenic 40.0%
CGCAGTTTCCACATACTAAT+TGG - chr7_1:79635178-79635197 None:intergenic 40.0%
! CACAACATTGATTGGTAGAG+TGG - chr7_1:79635311-79635330 None:intergenic 40.0%
GTGTTGTAACTGTAACTCAG+TGG + chr7_1:79635328-79635347 Msa1041950:three_prime_UTR 40.0%
! AACTTGGTGGTTAAGAGGGA+TGG - chr7_1:79624615-79624634 None:intergenic 45.0%
TGAGAGTGGTGAGTTCAACT+TGG - chr7_1:79624631-79624650 None:intergenic 45.0%
ACCTCCGATCCTTACTTAGT+TGG + chr7_1:79624731-79624750 Msa1041950:CDS 45.0%
CCTCCGATCCTTACTTAGTT+GGG + chr7_1:79624732-79624751 Msa1041950:CDS 45.0%
TGCCCCAAATCTAGTGGTTT+AGG + chr7_1:79624957-79624976 Msa1041950:CDS 45.0%
GCCCCAAATCTAGTGGTTTA+GGG + chr7_1:79624958-79624977 Msa1041950:CDS 45.0%
CCCCTAAACCACTAGATTTG+GGG - chr7_1:79624962-79624981 None:intergenic 45.0%
CCCCAAATCTAGTGGTTTAG+GGG + chr7_1:79624959-79624978 Msa1041950:CDS 45.0%
CACCCCTAAACCACTAGATT+TGG - chr7_1:79624964-79624983 None:intergenic 45.0%
TGATCCGGTGTGTTCTTATG+CGG + chr7_1:79625358-79625377 Msa1041950:CDS 45.0%
TGAACCGCATAAGAACACAC+CGG - chr7_1:79625365-79625384 None:intergenic 45.0%
TACAAGTCAGTGCTCTTCTC+AGG + chr7_1:79625391-79625410 Msa1041950:CDS 45.0%
TTTCAGTATGGGGATGGAAG+TGG + chr7_1:79625434-79625453 Msa1041950:CDS 45.0%
TTCAGTATGGGGATGGAAGT+GGG + chr7_1:79625435-79625454 Msa1041950:CDS 45.0%
GAGGACTCACCCAAAAACAA+CGG - chr7_1:79625540-79625559 None:intergenic 45.0%
AGTGTGCTCAATGTAGGGTT+GGG + chr7_1:79625595-79625614 Msa1041950:intron 45.0%
!!! GGAATTTTTGGGTTTGGTCC+TGG + chr7_1:79625851-79625870 Msa1041950:CDS 45.0%
ACAAGTGTCATCACAAGGCA+TGG + chr7_1:79625892-79625911 Msa1041950:CDS 45.0%
CTCTCATTGCTTAAAGGGAC+AGG + chr7_1:79625928-79625947 Msa1041950:CDS 45.0%
CAACATCTGTGTTAGGAGAG+GGG - chr7_1:79626579-79626598 None:intergenic 45.0%
CCAACATCTGTGTTAGGAGA+GGG - chr7_1:79626580-79626599 None:intergenic 45.0%
ACCAACATCTGTGTTAGGAG+AGG - chr7_1:79626581-79626600 None:intergenic 45.0%
! TTTGGGTGTTTTTCATGCCC+TGG + chr7_1:79626684-79626703 Msa1041950:intron 45.0%
CCTGAAATTCGATCAACACC+AGG - chr7_1:79626982-79627001 None:intergenic 45.0%
!! CCTGGTGTTGATCGAATTTC+AGG + chr7_1:79626979-79626998 Msa1041950:intron 45.0%
!! CTTCAAAGCATTGCGGTCAA+TGG + chr7_1:79627020-79627039 Msa1041950:CDS 45.0%
CTTAAACCGTCTTTGCGGAT+TGG - chr7_1:79627429-79627448 None:intergenic 45.0%
CAATCCGCAAAGACGGTTTA+AGG + chr7_1:79627427-79627446 Msa1041950:intron 45.0%
ATCGTGACTCATGAGTACCT+TGG - chr7_1:79627504-79627523 None:intergenic 45.0%
AACACACTGCCATTGCAGTA+AGG + chr7_1:79627719-79627738 Msa1041950:intron 45.0%
GAATCTTGAGACTAGACACC+TGG + chr7_1:79627874-79627893 Msa1041950:intron 45.0%
TGTAAATCAGTGCACGGGAA+AGG - chr7_1:79628154-79628173 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + chr7_1:79628533-79628552 Msa1041950:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - chr7_1:79628603-79628622 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + chr7_1:79628696-79628715 Msa1041950:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG + chr7_1:79628780-79628799 Msa1041950:intron 45.0%
GCACTACGACCACTCAAATA+TGG + chr7_1:79628841-79628860 Msa1041950:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - chr7_1:79629031-79629050 None:intergenic 45.0%
! GGGTGAGCTCTCCTTTTATA+GGG + chr7_1:79629146-79629165 Msa1041950:intron 45.0%
! GATATGCTTTTGGATCGGGT+CGG + chr7_1:79629268-79629287 Msa1041950:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + chr7_1:79629306-79629325 Msa1041950:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG + chr7_1:79629408-79629427 Msa1041950:intron 45.0%
! GCGTACCCAATTTTGTGAAC+GGG - chr7_1:79629417-79629436 None:intergenic 45.0%
! GGCGTACCCAATTTTGTGAA+CGG - chr7_1:79629418-79629437 None:intergenic 45.0%
TCACAAAATTGGGTACGCCA+AGG + chr7_1:79629419-79629438 Msa1041950:intron 45.0%
CACAAAATTGGGTACGCCAA+GGG + chr7_1:79629420-79629439 Msa1041950:intron 45.0%
ATGGGAAAAGTGACCTCCAA+GGG - chr7_1:79629450-79629469 None:intergenic 45.0%
TATGGGAAAAGTGACCTCCA+AGG - chr7_1:79629451-79629470 None:intergenic 45.0%
TCCCCCACTTGACTTCAAAA+TGG + chr7_1:79629598-79629617 Msa1041950:intron 45.0%
! CTAAAAGCCCGTGCGTTTTA+AGG + chr7_1:79629793-79629812 Msa1041950:intron 45.0%
!! CCGGTTTTAACGAATGCTCT+AGG + chr7_1:79629831-79629850 Msa1041950:intron 45.0%
GACTGGAGATCCCAAGAAAT+AGG - chr7_1:79630078-79630097 None:intergenic 45.0%
! TACCATCACTTGTGGGCTAT+AGG + chr7_1:79630111-79630130 Msa1041950:intron 45.0%
CCAAGAAACATCCAGTAGGA+TGG - chr7_1:79630145-79630164 None:intergenic 45.0%
CCATCCTACTGGATGTTTCT+TGG + chr7_1:79630142-79630161 Msa1041950:intron 45.0%
TTCATGGGAGAAACCGTTAC+CGG - chr7_1:79630368-79630387 None:intergenic 45.0%
GTAACGGTTTCTCCCATGAA+GGG + chr7_1:79630368-79630387 Msa1041950:intron 45.0%
GCTAGCTGAAATCCCTTCAT+GGG - chr7_1:79630383-79630402 None:intergenic 45.0%
TGCTAGCTGAAATCCCTTCA+TGG - chr7_1:79630384-79630403 None:intergenic 45.0%
TGCACATTGAGCATCACTAG+AGG - chr7_1:79630511-79630530 None:intergenic 45.0%
GAGTTATAAACGGCGGCTAA+AGG + chr7_1:79631293-79631312 Msa1041950:intron 45.0%
! AATGGGAGCACGACATTAGT+GGG - chr7_1:79631796-79631815 None:intergenic 45.0%
! TAATGGGAGCACGACATTAG+TGG - chr7_1:79631797-79631816 None:intergenic 45.0%
TTGTGTACCATGCACTCTTG+TGG - chr7_1:79632505-79632524 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + chr7_1:79628533-79628552 Msa1041950:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - chr7_1:79628603-79628622 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + chr7_1:79628696-79628715 Msa1041950:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG + chr7_1:79628780-79628799 Msa1041950:intron 45.0%
GCACTACGACCACTCAAATA+TGG + chr7_1:79628841-79628860 Msa1041950:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - chr7_1:79629031-79629050 None:intergenic 45.0%
! GGGTGAGCTCTCCTTTTATA+GGG + chr7_1:79629146-79629165 Msa1041950:intron 45.0%
! GATATGCTTTTGGATCGGGT+CGG + chr7_1:79629268-79629287 Msa1041950:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + chr7_1:79629306-79629325 Msa1041950:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG + chr7_1:79629408-79629427 Msa1041950:intron 45.0%
! GCGTACCCAATTTTGTGAAC+GGG - chr7_1:79629417-79629436 None:intergenic 45.0%
! GGCGTACCCAATTTTGTGAA+CGG - chr7_1:79629418-79629437 None:intergenic 45.0%
TCACAAAATTGGGTACGCCA+AGG + chr7_1:79629419-79629438 Msa1041950:intron 45.0%
CACAAAATTGGGTACGCCAA+GGG + chr7_1:79629420-79629439 Msa1041950:intron 45.0%
ATGGGAAAAGTGACCTCCAA+GGG - chr7_1:79629450-79629469 None:intergenic 45.0%
TATGGGAAAAGTGACCTCCA+AGG - chr7_1:79629451-79629470 None:intergenic 45.0%
CACGAGAACTACTCCTACTT+AGG - chr7_1:79634258-79634277 None:intergenic 45.0%
!! TATAGGATGGTGCTGCAATG+TGG + chr7_1:79634321-79634340 Msa1041950:intron 45.0%
! TTCCCCCTTTAAGAGCAACA+TGG + chr7_1:79634490-79634509 Msa1041950:intron 45.0%
CACCATGTTGCTCTTAAAGG+GGG - chr7_1:79634495-79634514 None:intergenic 45.0%
GCACCATGTTGCTCTTAAAG+GGG - chr7_1:79634496-79634515 None:intergenic 45.0%
GAAGGATCAGACCCATTTGT+GGG + chr7_1:79634553-79634572 Msa1041950:intron 45.0%
ACTGCGGATCTCACTGTAAA+AGG + chr7_1:79635192-79635211 Msa1041950:three_prime_UTR 45.0%
CTGCGGATCTCACTGTAAAA+GGG + chr7_1:79635193-79635212 Msa1041950:three_prime_UTR 45.0%
AGGGCTCTGTTGTTGAGAAA+TGG + chr7_1:79635212-79635231 Msa1041950:three_prime_UTR 45.0%
!! TTATATTTAATATTATTAGT+TGG - chr7_1:79627632-79627651 None:intergenic 5.0%
TATGCGCGTTCCTTTGTTGG+TGG + chr7_1:79624514-79624533 Msa1041950:exon 50.0%
!! CGTTCCTTTGTTGGTGGCTT+TGG + chr7_1:79624520-79624539 Msa1041950:CDS 50.0%
GAGTGGTGAGTTCAACTTGG+TGG - chr7_1:79624628-79624647 None:intergenic 50.0%
!! TATGTCGCGAGCTTTGAGAG+TGG - chr7_1:79624645-79624664 None:intergenic 50.0%
AGTAAGGATCGGAGGTTCCT+TGG - chr7_1:79624727-79624746 None:intergenic 50.0%
CCCAACTAAGTAAGGATCGG+AGG - chr7_1:79624735-79624754 None:intergenic 50.0%
! AGGGAGAGTGTGCTCAATGT+AGG + chr7_1:79625589-79625608 Msa1041950:intron 50.0%
! GGGAGAGTGTGCTCAATGTA+GGG + chr7_1:79625590-79625609 Msa1041950:intron 50.0%
GAGTGTGCTCAATGTAGGGT+TGG + chr7_1:79625594-79625613 Msa1041950:intron 50.0%
AGGTGTAGCACCTATCAGTC+TGG + chr7_1:79625797-79625816 Msa1041950:intron 50.0%
GGTGTAGCACCTATCAGTCT+GGG + chr7_1:79625798-79625817 Msa1041950:intron 50.0%
GTGTAGCACCTATCAGTCTG+GGG + chr7_1:79625799-79625818 Msa1041950:CDS 50.0%
CACCTATCAGTCTGGGGATT+TGG + chr7_1:79625805-79625824 Msa1041950:CDS 50.0%
AGCCAAATCCCCAGACTGAT+AGG - chr7_1:79625810-79625829 None:intergenic 50.0%
ATCAGTCTGGGGATTTGGCT+CGG + chr7_1:79625810-79625829 Msa1041950:CDS 50.0%
!! GGATTTGGCTCGGACAGAAA+AGG + chr7_1:79625820-79625839 Msa1041950:CDS 50.0%
CGGACAGAAAAGGCAGTTGA+TGG + chr7_1:79625830-79625849 Msa1041950:CDS 50.0%
CCCTCTCCTAACACAGATGT+TGG + chr7_1:79626577-79626596 Msa1041950:intron 50.0%
GAGACACAGCCTTACTGCAA+TGG - chr7_1:79627731-79627750 None:intergenic 50.0%
TTGGACTCTTGGGTAGATGC+TGG - chr7_1:79627843-79627862 None:intergenic 50.0%
! GCGGCTAGTCACATATATCC+AGG - chr7_1:79627895-79627914 None:intergenic 50.0%
TGGTTGGGACCAGATAACAC+TGG - chr7_1:79628246-79628265 None:intergenic 50.0%
AGTGTTATCTGGTCCCAACC+AGG + chr7_1:79628245-79628264 Msa1041950:CDS 50.0%
! TTTCATGGGTGGAGCATCCA+TGG + chr7_1:79628393-79628412 Msa1041950:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + chr7_1:79628508-79628527 Msa1041950:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - chr7_1:79628529-79628548 None:intergenic 50.0%
GCACTACCCAAAGTTGTGCA+AGG + chr7_1:79628555-79628574 Msa1041950:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - chr7_1:79628597-79628616 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - chr7_1:79628600-79628619 None:intergenic 50.0%
! GGGGTGAGCTCTCCTTTTAT+AGG + chr7_1:79629145-79629164 Msa1041950:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG + chr7_1:79629487-79629506 Msa1041950:intron 50.0%
GAAGTCAAGTGGGGGATTGT+TGG - chr7_1:79629594-79629613 None:intergenic 50.0%
AAAACCGGGATACACGTGCA+GGG - chr7_1:79629819-79629838 None:intergenic 50.0%
TAAAACCGGGATACACGTGC+AGG - chr7_1:79629820-79629839 None:intergenic 50.0%
GCCTCGAAATTCCATAGGAC+TGG + chr7_1:79629860-79629879 Msa1041950:intron 50.0%
GCCAGTCCTATGGAATTTCG+AGG - chr7_1:79629864-79629883 None:intergenic 50.0%
TGGAACTTAGGCCAGTCCTA+TGG - chr7_1:79629874-79629893 None:intergenic 50.0%
CATGATCCTGCAGCGAAAGA+AGG - chr7_1:79629992-79630011 None:intergenic 50.0%
CTTGGGATCTCCAGTCATGT+AGG + chr7_1:79630082-79630101 Msa1041950:intron 50.0%
GGATCTCCAGTCATGTAGGT+CGG + chr7_1:79630086-79630105 Msa1041950:intron 50.0%
GATCTCCAGTCATGTAGGTC+GGG + chr7_1:79630087-79630106 Msa1041950:intron 50.0%
GTCGGGTTACCATCACTTGT+GGG + chr7_1:79630104-79630123 Msa1041950:intron 50.0%
TGCCTATAGCCCACAAGTGA+TGG - chr7_1:79630116-79630135 None:intergenic 50.0%
AGGCATTAGTCCCATCCTAC+TGG + chr7_1:79630131-79630150 Msa1041950:intron 50.0%
! GGTAACGGTTTCTCCCATGA+AGG + chr7_1:79630367-79630386 Msa1041950:intron 50.0%
GAGCATCATTGGCAGCACTT+AGG - chr7_1:79630750-79630769 None:intergenic 50.0%
! ATGGGAGCACGACATTAGTG+GGG - chr7_1:79631795-79631814 None:intergenic 50.0%
!! AGAATAGTGGGGGCACTAGT+GGG - chr7_1:79631825-79631844 None:intergenic 50.0%
!! AAGAATAGTGGGGGCACTAG+TGG - chr7_1:79631826-79631845 None:intergenic 50.0%
! TACTAGGTTGAGTCACGACC+AGG + chr7_1:79628508-79628527 Msa1041950:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - chr7_1:79628529-79628548 None:intergenic 50.0%
GCACTACCCAAAGTTGTGCA+AGG + chr7_1:79628555-79628574 Msa1041950:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - chr7_1:79628597-79628616 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - chr7_1:79628600-79628619 None:intergenic 50.0%
! GGGGTGAGCTCTCCTTTTAT+AGG + chr7_1:79629145-79629164 Msa1041950:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG + chr7_1:79629487-79629506 Msa1041950:intron 50.0%
!! ATGGTGCTATACAGTTCCGG+TGG + chr7_1:79634509-79634528 Msa1041950:intron 50.0%
GGAAGGATCAGACCCATTTG+TGG + chr7_1:79634552-79634571 Msa1041950:intron 50.0%
! TAAATTGGTGCTCGCTGCTC+AGG + chr7_1:79634831-79634850 Msa1041950:intron 50.0%
TGTGGCTACGAGCAAGAGTA+AGG + chr7_1:79634875-79634894 Msa1041950:CDS 50.0%
AAGGATGCATACCTCAGTGC+AGG + chr7_1:79634894-79634913 Msa1041950:CDS 50.0%
!! TTGGTAGAGTGGAAGTGCTC+TGG - chr7_1:79635300-79635319 None:intergenic 50.0%
GGCGCTCGAATCTTGCAAGA+CGG + chr7_1:79624674-79624693 Msa1041950:CDS 55.0%
GCTCGAATCTTGCAAGACGG+CGG + chr7_1:79624677-79624696 Msa1041950:CDS 55.0%
! GCTGGTTTCCTGCTCTGATC+CGG + chr7_1:79625343-79625362 Msa1041950:CDS 55.0%
AGAACACACCGGATCAGAGC+AGG - chr7_1:79625354-79625373 None:intergenic 55.0%
TGCTTAAAGGGACAGGGCAG+TGG + chr7_1:79625935-79625954 Msa1041950:CDS 55.0%
TTAAAGGGACAGGGCAGTGG+AGG + chr7_1:79625938-79625957 Msa1041950:CDS 55.0%
!! GGAGGAGGCATACTGGTTCT+TGG + chr7_1:79625956-79625975 Msa1041950:CDS 55.0%
CTTGGGTAGATGCTGGATCC+TGG - chr7_1:79627836-79627855 None:intergenic 55.0%
CGGTTACGTACCGTATCGAG+TGG - chr7_1:79628709-79628728 None:intergenic 55.0%
ACAAGTCGGAGGGAGAAGAG+AGG + chr7_1:79629072-79629091 Msa1041950:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG + chr7_1:79629486-79629505 Msa1041950:intron 55.0%
TGCAGGGCCTTAAAACGCAC+GGG - chr7_1:79629803-79629822 None:intergenic 55.0%
GTGCAGGGCCTTAAAACGCA+CGG - chr7_1:79629804-79629823 None:intergenic 55.0%
TGAGTGGGGTACACAGCTAC+AGG - chr7_1:79629928-79629947 None:intergenic 55.0%
CCTGCAGCGAAAGAAGGATG+AGG - chr7_1:79629986-79630005 None:intergenic 55.0%
CCTCATCCTTCTTTCGCTGC+AGG + chr7_1:79629983-79630002 Msa1041950:intron 55.0%
GGTAACCCGACCTACATGAC+TGG - chr7_1:79630095-79630114 None:intergenic 55.0%
GGTCGGGTTACCATCACTTG+TGG + chr7_1:79630103-79630122 Msa1041950:intron 55.0%
! TGGGAGCACGACATTAGTGG+GGG - chr7_1:79631794-79631813 None:intergenic 55.0%
! GCACTAGTGGGGGCTCTAAT+GGG - chr7_1:79631813-79631832 None:intergenic 55.0%
!! AATAGTGGGGGCACTAGTGG+GGG - chr7_1:79631823-79631842 None:intergenic 55.0%
!! GAATAGTGGGGGCACTAGTG+GGG - chr7_1:79631824-79631843 None:intergenic 55.0%
GTTCAACTCTCTTGGGGTCC+AGG + chr7_1:79631986-79632005 Msa1041950:intron 55.0%
CGGTTACGTACCGTATCGAG+TGG - chr7_1:79628709-79628728 None:intergenic 55.0%
ACAAGTCGGAGGGAGAAGAG+AGG + chr7_1:79629072-79629091 Msa1041950:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG + chr7_1:79629486-79629505 Msa1041950:intron 55.0%
! GGTGCTGCAATGTGGTGCAT+TGG + chr7_1:79634329-79634348 Msa1041950:CDS 55.0%
CACTCATCTGTCCTGCACTG+AGG - chr7_1:79634908-79634927 None:intergenic 55.0%
GGAGAGAACGCTGATGTGTG+AGG - chr7_1:79634937-79634956 None:intergenic 55.0%
GCGGCCAAAGCCACCAACAA+AGG - chr7_1:79624527-79624546 None:intergenic 60.0%
!! GTTGGTGGCTTTGGCCGCAA+TGG + chr7_1:79624529-79624548 Msa1041950:CDS 60.0%
TTTGGCCGCAATGGCGGTGA+CGG + chr7_1:79624538-79624557 Msa1041950:CDS 60.0%
CGTAACCGTCACCGCCATTG+CGG - chr7_1:79624546-79624565 None:intergenic 60.0%
! CGCAATGGCGGTGACGGTTA+CGG + chr7_1:79624544-79624563 Msa1041950:CDS 60.0%
GTGACGGTTACGGCCGTATG+CGG + chr7_1:79624554-79624573 Msa1041950:CDS 60.0%
GCTCGCGACATAGCTCGTCA+CGG + chr7_1:79624653-79624672 Msa1041950:CDS 60.0%
ATCTTGCAAGACGGCGGTGC+TGG + chr7_1:79624683-79624702 Msa1041950:CDS 60.0%
CGCAGCAGTGGATGAACTCG+CGG - chr7_1:79625324-79625343 None:intergenic 60.0%
GAGTTCATCCACTGCTGCGC+TGG + chr7_1:79625325-79625344 Msa1041950:CDS 60.0%
CTGTGTTAGGAGAGGGGAGC+TGG - chr7_1:79626573-79626592 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - chr7_1:79628592-79628611 None:intergenic 60.0%
AAGGCCCTGCACGTGTATCC+CGG + chr7_1:79629812-79629831 Msa1041950:intron 60.0%
! GGCACTAGTGGGGGCTCTAA+TGG - chr7_1:79631814-79631833 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - chr7_1:79628592-79628611 None:intergenic 60.0%
!! GGTGGCTTTGGCCGCAATGG+CGG + chr7_1:79624532-79624551 Msa1041950:CDS 65.0%
ACGGTTACGGCCGTATGCGG+CGG + chr7_1:79624557-79624576 Msa1041950:CDS 65.0%
! GGCCGTATGCGGCGGTTTTC+CGG + chr7_1:79624565-79624584 Msa1041950:CDS 65.0%
! GCCGTATGCGGCGGTTTTCC+GGG + chr7_1:79624566-79624585 Msa1041950:CDS 65.0%
CCCCGGAAAACCGCCGCATA+CGG - chr7_1:79624570-79624589 None:intergenic 65.0%
! CCGTATGCGGCGGTTTTCCG+GGG + chr7_1:79624567-79624586 Msa1041950:CDS 65.0%
GCAGGAAACCAGCGCAGCAG+TGG - chr7_1:79625336-79625355 None:intergenic 65.0%
GGGGATGGAAGTGGGACGTC+TGG + chr7_1:79625443-79625462 Msa1041950:CDS 65.0%
AAGGGACAGGGCAGTGGAGG+AGG + chr7_1:79625941-79625960 Msa1041950:CDS 65.0%
! GGGCAGTGGAGGAGGCATAC+TGG + chr7_1:79625949-79625968 Msa1041950:CDS 65.0%
CTATCAACCACGCCGCCTCC+AGG + chr7_1:79628582-79628601 Msa1041950:intron 65.0%
! GTACGCCAAGGGCACACCCT+TGG + chr7_1:79629431-79629450 Msa1041950:intron 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - chr7_1:79629439-79629458 None:intergenic 65.0%
CTATCAACCACGCCGCCTCC+AGG + chr7_1:79628582-79628601 Msa1041950:intron 65.0%
! GTACGCCAAGGGCACACCCT+TGG + chr7_1:79629431-79629450 Msa1041950:intron 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - chr7_1:79629439-79629458 None:intergenic 65.0%
AGTTCCGGTGGTCCACCGCA+GGG + chr7_1:79634521-79634540 Msa1041950:intron 65.0%
TCCTTCCCTAGACCCCCCTG+CGG - chr7_1:79634539-79634558 None:intergenic 65.0%
! CGCCAAGGGCACACCCTTGG+AGG + chr7_1:79629434-79629453 Msa1041950:intron 70.0%
! CGCCAAGGGCACACCCTTGG+AGG + chr7_1:79629434-79629453 Msa1041950:intron 70.0%
CAGTTCCGGTGGTCCACCGC+AGG + chr7_1:79634520-79634539 Msa1041950:intron 70.0%
GTTCCGGTGGTCCACCGCAG+GGG + chr7_1:79634522-79634541 Msa1041950:intron 70.0%
TTCCGGTGGTCCACCGCAGG+GGG + chr7_1:79634523-79634542 Msa1041950:intron 70.0%
GTCCACCGCAGGGGGGTCTA+GGG + chr7_1:79634531-79634550 Msa1041950:intron 70.0%
TTCCCTAGACCCCCCTGCGG+TGG - chr7_1:79634536-79634555 None:intergenic 70.0%
ACCGCAGGGGGGTCTAGGGA+AGG + chr7_1:79634535-79634554 Msa1041950:intron 70.0%
TCCGGTGGTCCACCGCAGGG+GGG + chr7_1:79634524-79634543 Msa1041950:intron 75.0%
ACCCCCCTGCGGTGGACCAC+CGG - chr7_1:79634528-79634547 None:intergenic 75.0%
GGTCCACCGCAGGGGGGTCT+AGG + chr7_1:79634530-79634549 Msa1041950:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 79624390 79635465 79624390 ID=Msa1041950;Name=Msa1041950
chr7_1 mRNA 79624390 79635465 79624390 ID=Msa1041950-mRNA-1;Parent=Msa1041950;Name=Msa1041950-mRNA-1;_AED=0.21;_eAED=0.21;_QI=105|0.9|0.90|1|0.6|0.63|11|437|472
chr7_1 exon 79624390 79624430 79624390 ID=Msa1041950-mRNA-1:exon:21568;Parent=Msa1041950-mRNA-1
chr7_1 exon 79624451 79624753 79624451 ID=Msa1041950-mRNA-1:exon:21569;Parent=Msa1041950-mRNA-1
chr7_1 exon 79624851 79624980 79624851 ID=Msa1041950-mRNA-1:exon:21570;Parent=Msa1041950-mRNA-1
chr7_1 exon 79625299 79625549 79625299 ID=Msa1041950-mRNA-1:exon:21571;Parent=Msa1041950-mRNA-1
chr7_1 exon 79625799 79626026 79625799 ID=Msa1041950-mRNA-1:exon:21572;Parent=Msa1041950-mRNA-1
chr7_1 exon 79627001 79627163 79627001 ID=Msa1041950-mRNA-1:exon:21573;Parent=Msa1041950-mRNA-1
chr7_1 exon 79628193 79628266 79628193 ID=Msa1041950-mRNA-1:exon:21574;Parent=Msa1041950-mRNA-1
chr7_1 exon 79628360 79628381 79628360 ID=Msa1041950-mRNA-1:exon:21575;Parent=Msa1041950-mRNA-1
chr7_1 exon 79634326 79634389 79634326 ID=Msa1041950-mRNA-1:exon:21576;Parent=Msa1041950-mRNA-1
chr7_1 exon 79634702 79634773 79634702 ID=Msa1041950-mRNA-1:exon:21577;Parent=Msa1041950-mRNA-1
chr7_1 exon 79634853 79635465 79634853 ID=Msa1041950-mRNA-1:exon:21578;Parent=Msa1041950-mRNA-1
chr7_1 five_prime_UTR 79624390 79624430 79624390 ID=Msa1041950-mRNA-1:five_prime_utr;Parent=Msa1041950-mRNA-1
chr7_1 five_prime_UTR 79624451 79624514 79624451 ID=Msa1041950-mRNA-1:five_prime_utr;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79624515 79624753 79624515 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79624851 79624980 79624851 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79625299 79625549 79625299 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79625799 79626026 79625799 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79627001 79627163 79627001 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79628193 79628266 79628193 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79628360 79628381 79628360 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79634326 79634389 79634326 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79634702 79634773 79634702 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 CDS 79634853 79635028 79634853 ID=Msa1041950-mRNA-1:cds;Parent=Msa1041950-mRNA-1
chr7_1 three_prime_UTR 79635029 79635465 79635029 ID=Msa1041950-mRNA-1:three_prime_utr;Parent=Msa1041950-mRNA-1
Gene Sequence

>Msa1041950

ATGCGCGTTCCTTTGTTGGTGGCTTTGGCCGCAATGGCGGTGACGGTTACGGCCGTATGCGGCGGTTTTCCGGGGAGTTATCTTTCTCTTGAACGAACCATCCCTCTTAACCACCAAGTTGAACTCACCACTCTCAAAGCTCGCGACATAGCTCGTCACGGCGCTCGAATCTTGCAAGACGGCGGTGCTGGCATTCTTGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTAGTTGGGTTGTATTTTACTAAAGTGAAGATGGGTTCTCCTGCTAAAGAATTTTACGTTCAGATTGATACTGGAAGTGATATATTATGGCTTAATTGCAATACTTGCAATAATTGCCCCAAATCTAGTGGTTTAGGGATTGATCTCAATTACTTTGACACCGCGAGTTCATCCACTGCTGCGCTGGTTTCCTGCTCTGATCCGGTGTGTTCTTATGCGGTTCAAACGGCTACAAGTCAGTGCTCTTCTCAGGCTAATCAGTGCAGCTACACTTTTCAGTATGGGGATGGAAGTGGGACGTCTGGATATTATGTTTATGATGCTATGTATTTTGACGTGATCATGGGTCAGTCTGTGTTTTCTAACTCTTCATCTACCGTTGTTTTTGGGTGTAGCACCTATCAGTCTGGGGATTTGGCTCGGACAGAAAAGGCAGTTGATGGAATTTTTGGGTTTGGTCCTGGTGCTTTGTCTGTTATATCACAAGTGTCATCACAAGGCATGGCACCCAAAGTGTTCTCTCATTGCTTAAAGGGACAGGGCAGTGGAGGAGGCATACTGGTTCTTGGTGAAATTTTGGAGCCAAATATTGTTTATACTCCACTTGTCCCATTACAGCCTCATTATAATTTAAATCTTCAAAGCATTGCGGTCAATGGACAAATTCTCCCAATCGATCAAGATGTATTTGCAACAGGTAACAATCGAGGAACTATAATTGATTCCGGTACTACATTGGCATACCTTGTTCAAGAAGCTTATGATCCTTTTCTCAATGCTATAACTACCACTGTGTCACAATTTTCCAAACCCATTATTTCCAAAGGAAACCAGTGTTATCTGGTCCCAACCAGCCTAGGTGATATATTCCCTCTAGATGGTGCTGCAATGTGGTGCATTGGTTTCCAAAAAGTGCAGAAGGGATACACAATTTTAGGAGATCTTGTCCTCAAAGATAAGATTTTTGTATACGACTTAGCTAATCAACGAATTGGATGGACCGACTATGATTGTTCCTTAGCTGTAAATGTCTCTGTGGCTACGAGCAAGAGTAAGGATGCATACCTCAGTGCAGGACAGATGAGTGTTAGCTCCTCACACATCAGCGTTCTCTCCAAGTTGCAACTTGTAAGGATTGTGGCTTTTCTTGTGCATATAATAGTTTTCATGGAGCCCCAGTTTTTGTAG
Protein sequence

>Msa1041950

MRVPLLVALAAMAVTVTAVCGGFPGSYLSLERTIPLNHQVELTTLKARDIARHGARILQDGGAGILDFSVQGTSDPYLVGLYFTKVKMGSPAKEFYVQIDTGSDILWLNCNTCNNCPKSSGLGIDLNYFDTASSSTAALVSCSDPVCSYAVQTATSQCSSQANQCSYTFQYGDGSGTSGYYVYDAMYFDVIMGQSVFSNSSSTVVFGCSTYQSGDLARTEKAVDGIFGFGPGALSVISQVSSQGMAPKVFSHCLKGQGSGGGILVLGEILEPNIVYTPLVPLQPHYNLNLQSIAVNGQILPIDQDVFATGNNRGTIIDSGTTLAYLVQEAYDPFLNAITTTVSQFSKPIISKGNQCYLVPTSLGDIFPLDGAAMWCIGFQKVQKGYTILGDLVLKDKIFVYDLANQRIGWTDYDCSLAVNVSVATSKSKDAYLSAGQMSVSSSHISVLSKLQLVRIVAFLVHIIVFMEPQFL*