AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167760 MtrunA17_Chr7g0265331 97.384 497 10 1 1 494 1 497 0.0 981
Msa1167760 MtrunA17_Chr1g0179751 69.502 482 133 7 17 490 46 521 0.0 664
Msa1167760 MtrunA17_Chr2g0320621 62.826 460 164 4 10 465 9 465 0.0 577
Msa1167760 MtrunA17_Chr4g0027681 58.898 472 187 5 28 494 25 494 0.0 563
Msa1167760 MtrunA17_Chr1g0189381 39.440 464 251 9 37 490 31 474 3.12e-105 322
Msa1167760 MtrunA17_Chr7g0249451 38.277 499 265 12 1 489 9 474 3.93e-99 306
Msa1167760 MtrunA17_Chr7g0221681 38.864 440 243 10 37 465 34 458 7.85e-98 303
Msa1167760 MtrunA17_Chr4g0053721 31.525 387 213 14 75 438 74 431 1.46e-44 166
Msa1167760 MtrunA17_Chr5g0401601 31.117 376 219 13 80 438 87 439 2.82e-43 162
Msa1167760 MtrunA17_Chr1g0159791 28.718 390 232 12 68 437 46 409 5.19e-39 146
Msa1167760 MtrunA17_Chr4g0019931 56.557 122 50 1 86 204 1 122 5.35e-38 135
Msa1167760 MtrunA17_Chr4g0010951 29.557 406 226 15 77 438 57 446 9.60e-36 138
Msa1167760 MtrunA17_Chr6g0484731 26.047 430 272 14 41 447 154 560 1.56e-35 139
Msa1167760 MtrunA17_Chr3g0130741 26.895 409 236 17 68 452 73 442 5.97e-32 127
Msa1167760 MtrunA17_Chr3g0130931 29.867 375 219 19 80 438 103 449 1.20e-30 124
Msa1167760 MtrunA17_Chr8g0371371 27.059 425 269 15 48 456 78 477 2.99e-30 123
Msa1167760 MtrunA17_Chr2g0307991 29.032 372 223 15 82 438 60 405 7.53e-29 118
Msa1167760 MtrunA17_Chr5g0406001 26.763 482 289 21 45 489 72 526 1.20e-28 119
Msa1167760 MtrunA17_Chr8g0384731 24.688 401 240 16 77 452 69 432 3.95e-28 116
Msa1167760 MtrunA17_Chr2g0310831 29.839 372 225 17 80 438 93 441 5.15e-28 116
Msa1167760 MtrunA17_Chr2g0308001 30.189 371 225 17 82 438 59 409 5.45e-28 116
Msa1167760 MtrunA17_Chr2g0310801 30.811 370 221 18 80 438 89 434 6.21e-28 115
Msa1167760 MtrunA17_Chr5g0430861 67.949 78 22 1 204 278 27 104 8.49e-28 107
Msa1167760 MtrunA17_Chr1g0212321 26.942 412 259 14 36 437 107 486 1.18e-27 115
Msa1167760 MtrunA17_Chr8g0352671 28.267 375 230 17 79 438 87 437 5.72e-27 113
Msa1167760 MtrunA17_Chr8g0371351 25.820 488 289 19 45 488 64 522 6.13e-27 114
Msa1167760 MtrunA17_Chr2g0310821 30.481 374 208 20 80 438 107 443 2.91e-26 111
Msa1167760 MtrunA17_Chr3g0095891 28.989 376 236 14 80 437 96 458 2.07e-25 108
Msa1167760 MtrunA17_Chr2g0291201 30.481 374 221 15 80 437 101 451 2.35e-25 108
Msa1167760 MtrunA17_Chr5g0395911 28.684 380 221 18 79 438 65 414 2.51e-25 107
Msa1167760 MtrunA17_Chr5g0435871 27.763 371 233 16 80 438 88 435 2.77e-25 108
Msa1167760 MtrunA17_Chr1g0210201 25.532 423 275 12 28 437 72 467 3.26e-25 108
Msa1167760 MtrunA17_Chr7g0275731 26.359 368 238 12 80 437 140 484 3.94e-25 108
Msa1167760 MtrunA17_Chr3g0078321 26.667 390 224 16 79 438 56 413 2.60e-24 105
Msa1167760 MtrunA17_Chr1g0165201 25.948 343 223 12 80 414 127 446 3.96e-24 105
Msa1167760 MtrunA17_Chr8g0386441 28.075 374 226 17 80 438 85 430 6.58e-24 103
Msa1167760 MtrunA17_Chr5g0435971 28.032 371 232 17 80 438 85 432 6.83e-24 103
Msa1167760 MtrunA17_Chr5g0442921 26.632 383 239 15 80 438 190 554 1.20e-23 104
Msa1167760 MtrunA17_Chr8g0352661 29.067 375 228 18 80 438 85 437 3.21e-23 102
Msa1167760 MtrunA17_Chr3g0124421 26.277 411 264 13 45 437 61 450 4.86e-23 102
Msa1167760 MtrunA17_Chr3g0087851 25.806 372 249 13 76 438 84 437 6.70e-23 101
Msa1167760 MtrunA17_Chr5g0419291 26.667 420 255 20 35 437 45 428 2.00e-22 99.8
Msa1167760 MtrunA17_Chr2g0312941 25.126 398 228 17 76 433 82 449 2.32e-22 99.8
Msa1167760 MtrunA17_Chr5g0415951 26.790 377 238 14 76 438 83 435 1.67e-21 97.1
Msa1167760 MtrunA17_Chr5g0395931 27.778 378 228 19 79 438 86 436 1.83e-21 96.7
Msa1167760 MtrunA17_Chr6g0484901 25.205 365 234 11 82 437 157 491 1.20e-20 94.7
Msa1167760 MtrunA17_Chr7g0239001 27.320 388 224 19 86 439 64 427 1.94e-20 93.6
Msa1167760 MtrunA17_Chr3g0099891 25.469 373 231 11 79 437 115 454 3.03e-20 93.2
Msa1167760 MtrunA17_Chr4g0023351 31.276 243 144 9 82 314 59 288 7.25e-20 90.1
Msa1167760 MtrunA17_Chr7g0267171 26.000 400 231 16 80 437 89 465 8.00e-20 92.0
Msa1167760 MtrunA17_Chr2g0333991 27.056 377 228 17 79 436 86 434 9.67e-20 91.7
Msa1167760 MtrunA17_Chr2g0307461 27.561 410 230 18 64 437 52 430 1.08e-19 91.3
Msa1167760 MtrunA17_Chr5g0425141 24.538 379 240 14 78 437 98 449 1.60e-19 91.7
Msa1167760 MtrunA17_Chr4g0001991 30.400 375 210 20 86 439 175 519 3.32e-19 90.5
Msa1167760 MtrunA17_Chr6g0457401 26.854 391 247 15 65 438 69 437 4.89e-19 89.4
Msa1167760 MtrunA17_Chr5g0395871 27.688 372 230 18 80 438 80 425 1.39e-18 88.2
Msa1167760 MtrunA17_Chr2g0309561 23.317 416 264 12 66 437 104 508 1.43e-18 88.6
Msa1167760 MtrunA17_Chr3g0110191 25.065 387 226 15 86 442 91 443 1.59e-18 87.8
Msa1167760 MtrunA17_Chr5g0434411 27.034 381 222 17 86 438 86 438 3.48e-18 87.0
Msa1167760 MtrunA17_Chr8g0353261 24.528 424 259 21 35 438 52 434 3.00e-17 84.0
Msa1167760 MtrunA17_Chr3g0099901 26.158 367 240 13 80 437 141 485 4.93e-17 83.6
Msa1167760 MtrunA17_Chr2g0311451 26.913 379 230 18 79 438 86 436 6.73e-17 82.8
Msa1167760 MtrunA17_Chr6g0486981 24.129 373 243 14 82 438 89 437 5.04e-16 80.1
Msa1167760 MtrunA17_Chr6g0487471 26.166 386 223 20 80 438 85 435 1.13e-15 79.3
Msa1167760 MtrunA17_Chr1g0164401 23.670 376 229 18 82 438 93 429 9.30e-15 76.3
Msa1167760 MtrunA17_Chr1g0179091 25.745 369 213 15 80 438 50 367 7.15e-14 73.2
Msa1167760 MtrunA17_Chr5g0395891 28.076 317 189 16 138 438 20 313 9.81e-14 72.0
Msa1167760 MtrunA17_Chr5g0434441 26.615 387 230 22 86 444 73 433 1.21e-13 72.8
Msa1167760 MtrunA17_Chr4g0061641 27.989 368 228 18 82 438 56 397 1.08e-12 69.7
Msa1167760 MtrunA17_Chr3g0133071 26.525 377 227 19 79 438 95 438 3.23e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167760 AT2G36670.2 62.553 470 163 5 24 485 38 502 0.0 599
Msa1167760 AT2G36670.1 61.895 475 163 6 24 485 38 507 0.0 593
Msa1167760 AT5G22850.1 60.593 472 178 6 22 489 24 491 0.0 590
Msa1167760 AT2G36670.4 63.350 412 144 3 77 485 29 436 0.0 537
Msa1167760 AT2G36670.3 63.350 412 144 3 77 485 29 436 0.0 537
Msa1167760 AT1G08210.1 55.464 485 205 8 5 485 10 487 3.66e-175 502
Msa1167760 AT1G08210.4 55.464 485 205 8 5 485 44 521 4.09e-175 503
Msa1167760 AT1G08210.3 55.464 485 205 8 5 485 58 535 5.15e-175 503
Msa1167760 AT1G08210.2 52.539 512 205 9 5 485 10 514 3.86e-169 487
Msa1167760 AT1G05840.1 41.106 416 222 9 39 444 43 445 9.10e-104 319
Msa1167760 AT3G02740.1 38.496 452 248 12 41 483 50 480 2.30e-102 315
Msa1167760 AT3G02740.2 39.078 412 227 10 81 483 9 405 8.81e-96 296
Msa1167760 AT5G36260.1 38.596 456 252 12 39 484 41 478 9.13e-95 296
Msa1167760 AT1G65240.1 36.761 457 252 12 42 488 40 469 2.43e-86 274
Msa1167760 AT3G42550.1 36.134 476 230 17 12 473 10 425 2.38e-80 257
Msa1167760 AT5G43100.2 30.978 368 222 13 80 438 74 418 3.28e-47 171
Msa1167760 AT5G43100.1 30.345 435 258 17 80 493 74 484 5.14e-47 172
Msa1167760 AT3G50050.1 30.424 401 232 15 56 438 66 437 5.27e-39 150
Msa1167760 AT1G44130.1 27.865 384 228 12 77 438 44 400 1.12e-37 143
Msa1167760 AT3G25700.1 28.682 387 232 14 80 439 82 451 2.53e-35 137
Msa1167760 AT4G33490.2 27.543 403 238 17 68 446 48 420 2.10e-34 134
Msa1167760 AT3G51350.1 25.768 423 274 15 29 437 56 452 1.15e-30 125
Msa1167760 AT1G77480.1 27.735 393 231 12 77 444 62 426 1.20e-30 124
Msa1167760 AT1G49050.2 25.840 387 237 13 81 437 29 395 3.66e-30 122
Msa1167760 AT1G77480.2 27.979 386 225 12 77 437 62 419 4.00e-30 122
Msa1167760 AT1G49050.1 25.840 387 245 13 77 437 198 568 4.03e-30 124
Msa1167760 AT3G51360.1 27.835 388 231 19 71 438 78 436 5.97e-30 122
Msa1167760 AT3G51360.7 27.559 381 227 19 78 438 1 352 7.24e-30 121
Msa1167760 AT3G51360.9 27.835 388 231 19 71 438 88 446 8.36e-30 122
Msa1167760 AT2G17760.1 27.321 377 224 14 81 437 103 449 1.02e-29 122
Msa1167760 AT1G25510.1 28.608 388 233 14 59 437 131 483 8.26e-28 116
Msa1167760 AT5G10080.1 28.075 374 233 13 81 437 99 453 1.36e-27 116
Msa1167760 AT3G51340.2 25.936 374 240 13 77 437 98 447 1.17e-26 113
Msa1167760 AT4G33490.1 27.679 336 203 14 68 386 45 357 1.27e-26 112
Msa1167760 AT3G51360.10 28.198 383 220 20 71 427 78 431 2.57e-26 111
Msa1167760 AT1G01300.1 28.455 369 231 13 80 438 140 485 2.86e-26 112
Msa1167760 AT3G51360.6 28.198 383 220 20 71 427 88 441 3.65e-26 111
Msa1167760 AT3G51330.3 28.418 373 233 13 81 438 101 454 3.71e-26 111
Msa1167760 AT2G03200.1 26.702 382 228 15 80 437 105 458 6.53e-26 110
Msa1167760 AT3G51330.1 28.495 372 232 13 81 437 101 453 7.14e-26 111
Msa1167760 AT5G02190.1 28.010 382 225 20 91 440 82 445 2.47e-25 108
Msa1167760 AT3G54400.1 28.883 367 222 17 82 438 88 425 2.62e-25 108
Msa1167760 AT2G23945.1 27.251 422 263 16 35 437 52 448 3.14e-25 108
Msa1167760 AT3G18490.1 29.189 370 221 15 80 437 160 500 3.18e-25 108
Msa1167760 AT3G51360.5 29.412 323 185 15 71 376 88 384 4.22e-25 107
Msa1167760 AT1G09750.1 28.495 372 231 14 79 438 101 449 4.59e-25 108
Msa1167760 AT3G51360.4 29.412 323 185 15 71 376 78 374 4.68e-25 107
Msa1167760 AT5G10770.1 28.142 366 235 12 80 438 130 474 5.59e-25 108
Msa1167760 AT4G30040.1 28.528 326 187 15 76 379 79 380 7.45e-24 104
Msa1167760 AT3G12700.1 23.298 382 262 12 72 438 96 461 3.62e-23 102
Msa1167760 AT3G51330.2 28.333 360 224 13 81 425 101 441 3.63e-23 102
Msa1167760 AT3G51340.3 26.814 317 198 11 77 380 98 393 2.89e-22 99.4
Msa1167760 AT3G61820.1 27.670 412 257 18 42 437 97 483 2.94e-22 100
Msa1167760 AT4G35880.1 25.789 380 225 17 81 437 106 451 2.95e-22 100
Msa1167760 AT2G42980.1 25.781 384 244 16 80 438 158 525 2.99e-22 100
Msa1167760 AT3G51360.2 29.391 279 161 13 71 339 88 340 3.10e-22 98.2
Msa1167760 AT1G49050.3 24.908 273 188 6 77 343 198 459 3.33e-22 99.8
Msa1167760 AT3G59080.1 26.302 384 240 15 80 438 168 533 1.23e-21 98.6
Msa1167760 AT2G35615.1 27.225 382 235 14 80 438 83 444 1.44e-21 97.8
Msa1167760 AT3G20015.1 27.358 424 246 19 37 432 76 465 2.45e-21 97.1
Msa1167760 AT3G51340.4 26.786 280 178 8 77 346 98 360 2.77e-21 96.3
Msa1167760 AT3G51340.1 25.000 384 243 15 77 437 98 459 4.49e-21 96.7
Msa1167760 AT5G45120.1 25.899 417 231 18 82 439 83 480 6.69e-21 95.9
Msa1167760 AT4G30030.1 24.332 374 237 14 82 439 78 421 9.55e-21 95.1
Msa1167760 AT1G66180.1 24.682 393 221 17 86 441 76 430 1.72e-20 94.4
Msa1167760 AT1G64830.1 28.941 425 247 20 35 438 39 429 5.23e-20 92.8
Msa1167760 AT4G35880.2 28.846 260 151 11 81 328 106 343 6.39e-20 92.4
Msa1167760 AT5G37540.1 24.282 383 235 14 86 439 84 440 9.41e-20 92.0
Msa1167760 AT2G39710.1 26.316 399 217 19 86 440 69 434 1.03e-19 92.0
Msa1167760 AT3G52500.1 24.583 480 266 19 23 438 21 468 2.76e-19 90.9
Msa1167760 AT2G28225.1 24.865 370 237 13 77 438 62 398 2.00e-18 87.8
Msa1167760 AT1G31450.1 28.421 380 231 14 80 438 83 442 2.20e-18 87.8
Msa1167760 AT3G51360.3 25.749 334 206 17 118 438 6 310 3.34e-18 86.7
Msa1167760 AT3G51360.8 25.749 334 206 17 118 438 6 310 3.34e-18 86.7
Msa1167760 AT2G28040.1 24.528 371 230 16 82 442 65 395 1.86e-16 81.6
Msa1167760 AT2G28040.2 24.528 371 230 16 82 442 56 386 2.03e-16 81.6
Msa1167760 AT2G28220.1 24.599 374 235 16 80 442 65 402 2.29e-16 81.6
Msa1167760 AT5G33340.1 27.660 376 227 17 80 438 88 435 3.60e-16 81.3
Msa1167760 AT2G28030.1 27.476 313 172 14 81 379 60 331 4.05e-16 80.5
Msa1167760 AT3G59080.2 24.869 382 212 15 80 438 168 497 5.50e-15 77.8
Msa1167760 AT5G10760.1 25.867 375 221 18 80 437 130 464 1.03e-14 76.6
Msa1167760 AT1G79720.1 25.464 377 235 16 82 439 135 484 6.86e-14 74.3
Msa1167760 AT2G28010.1 23.990 396 233 17 69 442 47 396 8.01e-14 73.6
Msa1167760 AT5G07030.1 26.720 378 219 19 82 438 115 455 1.51e-13 73.2
Msa1167760 AT3G25700.2 29.630 135 88 3 80 211 82 212 2.17e-11 65.9

Find 148 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAGTTTCCACATACTAAT+TGG 0.138204 7_4:+60237177 None:intergenic
ACTGGTTCTTGGTGAAATTT+TGG 0.154711 7_4:-60240628 Msa1167760:CDS
ACTGCGGATCTCACTGTAAA+AGG 0.201454 7_4:-60237160 Msa1167760:three_prime_UTR
TCGGCATACCCTTCATAATT+AGG 0.214703 7_4:-60237256 Msa1167760:three_prime_UTR
CTGGTTTCCTTTGGAAATAA+TGG 0.224910 7_4:+60238372 None:intergenic
GAACAGTATCTTATACATTA+TGG 0.258657 7_4:-60238169 Msa1167760:CDS
CACCTATCAGTCTGGGGATT+TGG 0.259412 7_4:-60240790 Msa1167760:CDS
AAGAGTCGAAAGCTATTCTT+TGG 0.271201 7_4:-60237314 Msa1167760:three_prime_UTR
ATACTGGAAGTGATATATTA+TGG 0.272156 7_4:-60241673 Msa1167760:CDS
AGTGGAGTATAAACAATATT+TGG 0.278370 7_4:+60240603 None:intergenic
TGCCCCAAATCTAGTGGTTT+AGG 0.279897 7_4:-60241635 Msa1167760:CDS
TCTAGTCAGTTTAAATTTCA+TGG 0.291876 7_4:-60238218 Msa1167760:CDS
CACCCCTAAACCACTAGATT+TGG 0.292899 7_4:+60241631 None:intergenic
GCCCCAAATCTAGTGGTTTA+GGG 0.294640 7_4:-60241634 Msa1167760:CDS
ACCCCTAAACCACTAGATTT+GGG 0.310974 7_4:+60241632 None:intergenic
CTATTCTTTGGAAAACATAC+TGG 0.315547 7_4:-60237302 Msa1167760:three_prime_UTR
CGTTCCTTTGTTGGTGGCTT+TGG 0.316845 7_4:-60242063 Msa1167760:CDS
TGATATACTTCTGAAGTTGA+TGG 0.326352 7_4:-60237104 Msa1167760:three_prime_UTR
TCCTTTGGAAATAATGGGTT+TGG 0.336132 7_4:+60238378 None:intergenic
AGTGTTCTCTCATTGCTTAA+AGG 0.338954 7_4:-60240673 Msa1167760:CDS
TCTTATACATTATGGTTTCC+TGG 0.344892 7_4:-60238161 Msa1167760:intron
TGGTTTCCTTTGGAAATAAT+GGG 0.357720 7_4:+60238373 None:intergenic
CAAAGGAAACCAGTGTTATC+TGG 0.358026 7_4:-60238362 Msa1167760:CDS
GTGTTCTCTCATTGCTTAAA+GGG 0.374201 7_4:-60240672 Msa1167760:CDS
GACTTAGCTAATCAACGAAT+TGG 0.375931 7_4:-60237618 Msa1167760:CDS
ATCTTGCAAGACGGCGGTGC+TGG 0.375992 7_4:-60241900 Msa1167760:CDS
CAGATAACACTGGTTTCCTT+TGG 0.377630 7_4:+60238363 None:intergenic
GGGGATGGAAGTGGGACGTC+TGG 0.382505 7_4:-60241152 Msa1167760:CDS
AAAAGAGAACATACTGTAAT+GGG 0.384501 7_4:+60240577 None:intergenic
CTCTCATTGCTTAAAGGGAC+AGG 0.395990 7_4:-60240667 Msa1167760:CDS
GTTATATGTATACTTGCTCT+TGG 0.400490 7_4:-60236967 Msa1167760:three_prime_UTR
TCTCCAAGTTGCAACTTGTA+AGG 0.402644 7_4:-60237400 Msa1167760:CDS
AGTTACAACACAACATTGAT+TGG 0.410709 7_4:+60237036 None:intergenic
CTTCAAAGCATTGCGGTCAA+TGG 0.410851 7_4:-60239575 Msa1167760:CDS
AGGTGTAGCACCTATCAGTC+TGG 0.411075 7_4:-60240798 Msa1167760:CDS
AAGCAATGAGAGAACACTTT+GGG 0.415774 7_4:+60240678 None:intergenic
CGCAATGGCGGTGACGGTTA+CGG 0.415896 7_4:-60242039 Msa1167760:CDS
CGAGGAACTATAATTGATTC+CGG 0.417921 7_4:-60239506 Msa1167760:CDS
ACCTCCGATCCTTACTTAGT+TGG 0.422270 7_4:-60241852 Msa1167760:CDS
GGAGGAGGCATACTGGTTCT+TGG 0.423837 7_4:-60240639 Msa1167760:CDS
GAGTTCATCCACTGCTGCGC+TGG 0.433717 7_4:-60241270 Msa1167760:CDS
AGTTCAACTTGGTGGTTAAG+AGG 0.434274 7_4:+60241966 None:intergenic
TGAACGTAAAATTCTTTAGC+AGG 0.437141 7_4:+60241701 None:intergenic
AAGGGACAGGGCAGTGGAGG+AGG 0.437682 7_4:-60240654 Msa1167760:CDS
TAATGTATAAGATACTGTTC+TGG 0.437790 7_4:+60238172 None:intergenic
GCAAATACATCTTGATCGAT+TGG 0.441686 7_4:+60239542 None:intergenic
GATCAAGATGTATTTGCAAC+AGG 0.445817 7_4:-60239536 Msa1167760:CDS
AGTCGATGTTTATTTATTGT+CGG 0.453220 7_4:-60237275 Msa1167760:three_prime_UTR
GAAAAGAGAACATACTGTAA+TGG 0.456462 7_4:+60240576 None:intergenic
CCTCCGATCCTTACTTAGTT+GGG 0.457265 7_4:-60241851 Msa1167760:intron
AAATATGTGCGTTCCTTTGT+TGG 0.457373 7_4:-60242072 Msa1167760:exon
AGGGCTCTGTTGTTGAGAAA+TGG 0.457570 7_4:-60237140 Msa1167760:three_prime_UTR
GTGTTCTTATGCGGTTCAAA+CGG 0.458370 7_4:-60241228 Msa1167760:CDS
CAAATACATCTTGATCGATT+GGG 0.458939 7_4:+60239543 None:intergenic
CGGACAGAAAAGGCAGTTGA+TGG 0.459842 7_4:-60240765 Msa1167760:CDS
AGTAAGGATCGGAGGTTCCT+TGG 0.460466 7_4:+60241859 None:intergenic
AGCAACGGTAATGTAATAGA+TGG 0.461628 7_4:+60242106 None:intergenic
TACAAGTCAGTGCTCTTCTC+AGG 0.463939 7_4:-60241204 Msa1167760:CDS
GAACTTACAGCATTGAGAAA+AGG 0.465695 7_4:+60239446 None:intergenic
GCAGTTTCCACATACTAATT+GGG 0.466227 7_4:+60237178 None:intergenic
TACCCTTCATAATTAGGAAC+GGG 0.468220 7_4:-60237250 Msa1167760:three_prime_UTR
TGCTTAAAGGGACAGGGCAG+TGG 0.470903 7_4:-60240660 Msa1167760:CDS
AGCCAAATCCCCAGACTGAT+AGG 0.472138 7_4:+60240788 None:intergenic
CTAGTCAGTTTAAATTTCAT+GGG 0.472537 7_4:-60238217 Msa1167760:CDS
GAGAGGTGAAGTCAAGTCAA+TGG 0.473716 7_4:+60242192 None:intergenic
AGAATTGAAATAACCTGGTT+GGG 0.473934 7_4:+60238338 None:intergenic
ATGGCATACCCAACTAAGTA+AGG 0.478104 7_4:+60241843 None:intergenic
AACTTGGTGGTTAAGAGGGA+TGG 0.484441 7_4:+60241971 None:intergenic
TTTCAGTATGGGGATGGAAG+TGG 0.485519 7_4:-60241161 Msa1167760:CDS
TGAAGATTTAAATTATAATG+AGG 0.489504 7_4:+60239593 None:intergenic
GGGCAGTGGAGGAGGCATAC+TGG 0.491596 7_4:-60240646 Msa1167760:CDS
CTGCGGATCTCACTGTAAAA+GGG 0.494612 7_4:-60237159 Msa1167760:three_prime_UTR
AATCCTTACAAGTTGCAACT+TGG 0.495945 7_4:+60237397 None:intergenic
CCCCGGAAAACCGCCGCATA+CGG 0.497048 7_4:+60242016 None:intergenic
ACTCCCGTTCCTAATTATGA+AGG 0.498900 7_4:+60237247 None:intergenic
TTTGGCCGCAATGGCGGTGA+CGG 0.499664 7_4:-60242045 Msa1167760:CDS
ATGAAATTTAAACTGACTAG+AGG 0.499853 7_4:+60238220 None:intergenic
GCTGGTTTCCTGCTCTGATC+CGG 0.500916 7_4:-60241252 Msa1167760:CDS
TGTGGCTACGAGCAAGAGTA+AGG 0.501253 7_4:-60237477 Msa1167760:CDS
TCCAAACCCATTATTTCCAA+AGG 0.504188 7_4:-60238379 Msa1167760:CDS
TTTCATGGGTGGAGCATCCA+TGG 0.509541 7_4:-60238203 Msa1167760:CDS
GAGAATTGAAATAACCTGGT+TGG 0.510837 7_4:+60238337 None:intergenic
TATTCTTTGGAAAACATACT+GGG 0.512983 7_4:-60237301 Msa1167760:three_prime_UTR
GTTGGTGGCTTTGGCCGCAA+TGG 0.524773 7_4:-60242054 Msa1167760:CDS
GGTGCTGCAATGTGGTGCAT+TGG 0.527548 7_4:-60238023 Msa1167760:CDS
GAGTGGTGAGTTCAACTTGG+TGG 0.527798 7_4:+60241958 None:intergenic
GTCAGTTTAAATTTCATGGG+TGG 0.529169 7_4:-60238214 Msa1167760:CDS
AATTGATTCCGGTACTACAT+TGG 0.535206 7_4:-60239495 Msa1167760:CDS
CACAGAGACATTTACAGCTA+AGG 0.535686 7_4:+60237496 None:intergenic
GCAGGAAACCAGCGCAGCAG+TGG 0.535985 7_4:+60241262 None:intergenic
GGATTTGGCTCGGACAGAAA+AGG 0.537030 7_4:-60240775 Msa1167760:CDS
GGTGTAGCACCTATCAGTCT+GGG 0.537155 7_4:-60240797 Msa1167760:CDS
CACAACATTGATTGGTAGAG+TGG 0.537521 7_4:+60237044 None:intergenic
TTCAGTATGGGGATGGAAGT+GGG 0.538847 7_4:-60241160 Msa1167760:CDS
ATTCTTGACTTCTCAGTCCA+AGG 0.539154 7_4:-60241876 Msa1167760:CDS
AAGGATGCATACCTCAGTGC+AGG 0.544723 7_4:-60237458 Msa1167760:CDS
ATCAGTCTGGGGATTTGGCT+CGG 0.545545 7_4:-60240785 Msa1167760:CDS
TATGTGCGTTCCTTTGTTGG+TGG 0.552020 7_4:-60242069 Msa1167760:CDS
GTTGCAACTTGTAAGGATTG+TGG 0.554985 7_4:-60237393 Msa1167760:CDS
GTTTATAGTCTGACATCAGA+TGG 0.555614 7_4:+60236943 None:intergenic
TAGCTAATCAACGAATTGGA+TGG 0.564681 7_4:-60237614 Msa1167760:CDS
TGAGAGTGGTGAGTTCAACT+TGG 0.565316 7_4:+60241955 None:intergenic
TTAAAGGGACAGGGCAGTGG+AGG 0.565332 7_4:-60240657 Msa1167760:CDS
AAGGTATGCCAATGTAGTAC+CGG 0.566914 7_4:+60239487 None:intergenic
AGAACACACCGGATCAGAGC+AGG 0.568832 7_4:+60241244 None:intergenic
TTGGTAGAGTGGAAGTGCTC+TGG 0.570808 7_4:+60237055 None:intergenic
CCCCAAATCTAGTGGTTTAG+GGG 0.574664 7_4:-60241633 Msa1167760:intron
GTTCAACTTGGTGGTTAAGA+GGG 0.578619 7_4:+60241967 None:intergenic
TAAGCAATGAGAGAACACTT+TGG 0.581749 7_4:+60240677 None:intergenic
ACATACTGTAATGGGACAAG+TGG 0.583639 7_4:+60240585 None:intergenic
GGTGGCTTTGGCCGCAATGG+CGG 0.587107 7_4:-60242051 Msa1167760:CDS
CTCCCGTTCCTAATTATGAA+GGG 0.591005 7_4:+60237248 None:intergenic
TGAAATTTAAACTGACTAGA+GGG 0.591214 7_4:+60238221 None:intergenic
AGTGTTATCTGGTCCCAACC+AGG 0.596045 7_4:-60238351 Msa1167760:intron
GCGGCCAAAGCCACCAACAA+AGG 0.599752 7_4:+60242059 None:intergenic
AATACTTGCCCCAAATCTAG+TGG 0.602756 7_4:-60241641 Msa1167760:CDS
CGCAGCAGTGGATGAACTCG+CGG 0.603450 7_4:+60241274 None:intergenic
GCTCGAATCTTGCAAGACGG+CGG 0.607214 7_4:-60241906 Msa1167760:CDS
ACAAGTGTCATCACAAGGCA+TGG 0.607410 7_4:-60240703 Msa1167760:CDS
TCTCATTGCTTAAAGGGACA+GGG 0.615083 7_4:-60240666 Msa1167760:CDS
TGATCCGGTGTGTTCTTATG+CGG 0.615317 7_4:-60241237 Msa1167760:CDS
TTTAAATCTTCAAAGCATTG+CGG 0.618339 7_4:-60239582 Msa1167760:CDS
ATACCCTTCATAATTAGGAA+CGG 0.625211 7_4:-60237251 Msa1167760:three_prime_UTR
CCCCTAAACCACTAGATTTG+GGG 0.625821 7_4:+60241633 None:intergenic
CCCAACTAAGTAAGGATCGG+AGG 0.631666 7_4:+60241851 None:intergenic
GATCATAAGCTTCTTGAACA+AGG 0.632728 7_4:+60239468 None:intergenic
GATATAACAGACAAAGCACC+AGG 0.635071 7_4:+60240726 None:intergenic
ATACCCAACTAAGTAAGGAT+CGG 0.635525 7_4:+60241848 None:intergenic
GGCGCTCGAATCTTGCAAGA+CGG 0.636787 7_4:-60241909 Msa1167760:CDS
CTTAGCTGTAAATGTCTCTG+TGG 0.642439 7_4:-60237495 Msa1167760:CDS
TCAAGAGAAAGATAACTCCC+CGG 0.649451 7_4:+60241999 None:intergenic
GGTTAACTCACAATCATAGT+CGG 0.650073 7_4:+60237590 None:intergenic
CGTAACCGTCACCGCCATTG+CGG 0.659994 7_4:+60242040 None:intergenic
TATAGGATGGTGCTGCAATG+TGG 0.667848 7_4:-60238031 Msa1167760:intron
CTAGAGGGAATATATCACCT+AGG 0.670693 7_4:+60238236 None:intergenic
GCTCGCGACATAGCTCGTCA+CGG 0.680562 7_4:-60241930 Msa1167760:CDS
TATGTCGCGAGCTTTGAGAG+TGG 0.684708 7_4:+60241941 None:intergenic
ATATCACAAGTGTCATCACA+AGG 0.690052 7_4:-60240708 Msa1167760:CDS
TTTGCAACAGGTAACAATCG+AGG 0.690870 7_4:-60239524 Msa1167760:CDS
CAATTAGTATGTGGAAACTG+CGG 0.692656 7_4:-60237176 Msa1167760:three_prime_UTR
ATTCTTTGGAAAACATACTG+GGG 0.695529 7_4:-60237300 Msa1167760:three_prime_UTR
GTGTAGCACCTATCAGTCTG+GGG 0.699129 7_4:-60240796 Msa1167760:CDS
GGAGAGAACGCTGATGTGTG+AGG 0.705847 7_4:+60237418 None:intergenic
TGGTTGGGACCAGATAACAC+TGG 0.716713 7_4:+60238353 None:intergenic
CACTCATCTGTCCTGCACTG+AGG 0.721081 7_4:+60237447 None:intergenic
GTGTTGTAACTGTAACTCAG+TGG 0.758256 7_4:-60237024 Msa1167760:three_prime_UTR
TGAACCGCATAAGAACACAC+CGG 0.788703 7_4:+60241233 None:intergenic
TTTGGAAAATTGTGACACAG+TGG 0.790362 7_4:+60238396 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATTATATTTTAGATTTA+AGG - chr7_4:60237735-60237754 Msa1167760:intron 10.0%
!!! CTATTATATTTTAGATTTAA+GGG - chr7_4:60237736-60237755 Msa1167760:intron 10.0%
!!! TATTATATTTTAGATTTAAG+GGG - chr7_4:60237737-60237756 Msa1167760:intron 10.0%
!! GATGTAATAAATATTTAAAA+AGG + chr7_4:60238716-60238735 None:intergenic 10.0%
!!! TTTTTTTTTTTCTTTTCTAT+AGG - chr7_4:60240562-60240581 Msa1167760:intron 10.0%
!!! TTTTTTTTTTCTTTTCTATA+GGG - chr7_4:60240563-60240582 Msa1167760:intron 10.0%
!!! ATTTGTTTTAATAATAGCAA+CGG + chr7_4:60237010-60237029 None:intergenic 15.0%
!! AAATAATAAACCATAAAAGA+TGG - chr7_4:60237694-60237713 Msa1167760:intron 15.0%
!!! ATTATATTTTAGATTTAAGG+GGG - chr7_4:60237738-60237757 Msa1167760:intron 15.0%
!! TTTGAATTGAATATAGAAAT+TGG - chr7_4:60239341-60239360 Msa1167760:intron 15.0%
!! TGAAGATTTAAATTATAATG+AGG + chr7_4:60239508-60239527 None:intergenic 15.0%
!! TTATTAAGAAAAAATAGTGA+CGG + chr7_4:60239795-60239814 None:intergenic 15.0%
!! TAAATTACAGTTAATATTTG+CGG + chr7_4:60240417-60240436 None:intergenic 15.0%
!! AAAATCAATACTAAAATTAC+CGG + chr7_4:60241399-60241418 None:intergenic 15.0%
!! AAGAAAGAATGAAATGAATA+GGG + chr7_4:60236943-60236962 None:intergenic 20.0%
!! AAAGAAAGAATGAAATGAAT+AGG + chr7_4:60236944-60236963 None:intergenic 20.0%
!!! TATTTTACTAAAGTGAAGAT+GGG - chr7_4:60237370-60237389 Msa1167760:CDS 20.0%
!!! TAATTAGAAGTTTAGAACAT+GGG - chr7_4:60237588-60237607 Msa1167760:intron 20.0%
!!! TAGGTGAAATTTTGAAATAT+TGG - chr7_4:60238239-60238258 Msa1167760:CDS 20.0%
!!! TTGGTTTTAATTGATCTTAT+TGG - chr7_4:60238258-60238277 Msa1167760:intron 20.0%
!!! TGGTTTTAATTGATCTTATT+GGG - chr7_4:60238259-60238278 Msa1167760:intron 20.0%
!! TTAAAGATTAATTGCTTGTT+TGG - chr7_4:60238643-60238662 Msa1167760:intron 20.0%
!!! GTAATGTTTCTAATTTTGTT+TGG - chr7_4:60238830-60238849 Msa1167760:intron 20.0%
!!! AATGTAGAAAATTTTGTTCT+TGG + chr7_4:60239022-60239041 None:intergenic 20.0%
!!! TCAATACAGTATTTTTATGA+AGG - chr7_4:60239044-60239063 Msa1167760:intron 20.0%
!!! CAATACAGTATTTTTATGAA+GGG - chr7_4:60239045-60239064 Msa1167760:intron 20.0%
!! ATTGAATATAGAAATTGGTA+TGG - chr7_4:60239346-60239365 Msa1167760:intron 20.0%
!! ATATTAAGTTCTTAAAATGC+TGG - chr7_4:60239385-60239404 Msa1167760:intron 20.0%
!! TGATAAATAAATTTGGAGAA+CGG + chr7_4:60239748-60239767 None:intergenic 20.0%
!! TTCTCCAAATTTATTTATCA+GGG - chr7_4:60239748-60239767 Msa1167760:intron 20.0%
!! TAAAATAAACTGTAATGACT+TGG - chr7_4:60239812-60239831 Msa1167760:intron 20.0%
!! AAGGTCAGATTATTAATTTA+AGG - chr7_4:60239867-60239886 Msa1167760:intron 20.0%
!! ACAATAAATCATATATACCA+AGG - chr7_4:60239987-60240006 Msa1167760:intron 20.0%
!!! ATGCATTACTTGTTTTTTAT+AGG - chr7_4:60241050-60241069 Msa1167760:intron 20.0%
!!! ATTACTTGTTTTTTATAGGA+TGG - chr7_4:60241054-60241073 Msa1167760:intron 20.0%
!! ATACAAAAATCTTATCTTTG+AGG + chr7_4:60241458-60241477 None:intergenic 20.0%
!! TTAAGATTATGACAATGTAA+AGG + chr7_4:60241560-60241579 None:intergenic 20.0%
!! ACATTGTCATAATCTTAAAT+TGG - chr7_4:60241562-60241581 Msa1167760:intron 20.0%
! ACTAAGAATTAATCTTGTTC+AGG - chr7_4:60237344-60237363 Msa1167760:exon 25.0%
!! GTATTTTACTAAAGTGAAGA+TGG - chr7_4:60237369-60237388 Msa1167760:CDS 25.0%
! ATACTGGAAGTGATATATTA+TGG - chr7_4:60237425-60237444 Msa1167760:CDS 25.0%
!! GTAATTAGAAGTTTAGAACA+TGG - chr7_4:60237587-60237606 Msa1167760:intron 25.0%
! GCTATCAAGCTTAATTATAA+TGG - chr7_4:60237610-60237629 Msa1167760:CDS 25.0%
! AACCATAAAAGATGGTTAAA+AGG - chr7_4:60237702-60237721 Msa1167760:intron 25.0%
! ACCATAAAAGATGGTTAAAA+GGG - chr7_4:60237703-60237722 Msa1167760:intron 25.0%
!!! GGTAATGCTTAATGTTATTT+TGG - chr7_4:60237759-60237778 Msa1167760:intron 25.0%
!! ATGTTATTGATGGTATGATA+GGG - chr7_4:60238073-60238092 Msa1167760:intron 25.0%
! ATATATGAAATCTTGTCACT+AGG - chr7_4:60238220-60238239 Msa1167760:CDS 25.0%
! AGTGGAGTATAAACAATATT+TGG + chr7_4:60238498-60238517 None:intergenic 25.0%
! AAAAGAGAACATACTGTAAT+GGG + chr7_4:60238524-60238543 None:intergenic 25.0%
! ATCAATGTGATGCAAAATTA+GGG + chr7_4:60238597-60238616 None:intergenic 25.0%
! TATCAATGTGATGCAAAATT+AGG + chr7_4:60238598-60238617 None:intergenic 25.0%
!! TTTGCATCACATTGATAATA+AGG - chr7_4:60238601-60238620 Msa1167760:intron 25.0%
!! TTGCATCACATTGATAATAA+GGG - chr7_4:60238602-60238621 Msa1167760:intron 25.0%
!!! CTCGATTACAATTTTTTGAA+AGG - chr7_4:60238900-60238919 Msa1167760:intron 25.0%
! AAACAGTTAGTACAATGAAA+TGG + chr7_4:60238933-60238952 None:intergenic 25.0%
! TTTCATTGTACTAACTGTTT+AGG - chr7_4:60238933-60238952 Msa1167760:intron 25.0%
! TTCATTGTACTAACTGTTTA+GGG - chr7_4:60238934-60238953 Msa1167760:intron 25.0%
! ATTCTTGTTGCAAAAGTAAT+AGG - chr7_4:60238961-60238980 Msa1167760:intron 25.0%
!! TTGCATTCTATTTTCTCTTT+TGG - chr7_4:60239169-60239188 Msa1167760:intron 25.0%
!! TGCATTCTATTTTCTCTTTT+GGG - chr7_4:60239170-60239189 Msa1167760:intron 25.0%
! AAGAAAACAATGCATTGTTA+AGG + chr7_4:60239213-60239232 None:intergenic 25.0%
!! AAAATGAAAATGCATGGTTT+TGG - chr7_4:60239236-60239255 Msa1167760:intron 25.0%
!! ATTAGAACAATTGTGTTGTT+TGG + chr7_4:60239306-60239325 None:intergenic 25.0%
! TTATTTGACAATGGGAATAA+TGG + chr7_4:60239416-60239435 None:intergenic 25.0%
!!! TTTAAATCTTCAAAGCATTG+CGG - chr7_4:60239516-60239535 Msa1167760:CDS 25.0%
! GTTCTCCAAATTTATTTATC+AGG - chr7_4:60239747-60239766 Msa1167760:intron 25.0%
! TGTTCCCTGATAAATAAATT+TGG + chr7_4:60239755-60239774 None:intergenic 25.0%
! TATATGACAAGTCTTCTTTA+TGG - chr7_4:60239955-60239974 Msa1167760:intron 25.0%
! ATATGACAAGTCTTCTTTAT+GGG - chr7_4:60239956-60239975 Msa1167760:intron 25.0%
!!! TTCACAAAACAAAGTTTTGT+GGG + chr7_4:60240071-60240090 None:intergenic 25.0%
!! TTTCACAAAACAAAGTTTTG+TGG + chr7_4:60240072-60240091 None:intergenic 25.0%
!!! AAACTTTGTTTTGTGAAAAC+AGG - chr7_4:60240074-60240093 Msa1167760:intron 25.0%
!!! AACTTTGTTTTGTGAAAACA+GGG - chr7_4:60240075-60240094 Msa1167760:intron 25.0%
! ACTATGATGAAGTTACATTA+AGG - chr7_4:60240189-60240208 Msa1167760:intron 25.0%
! AATGTTTACCTGAAAAATAG+TGG - chr7_4:60240290-60240309 Msa1167760:intron 25.0%
! TTACGTTAACAAAAAAGAAG+TGG - chr7_4:60240434-60240453 Msa1167760:intron 25.0%
!!! ACATCTAGAACTTTTTTTGA+CGG + chr7_4:60240493-60240512 None:intergenic 25.0%
! TGAAATTTAAACTGACTAGA+GGG + chr7_4:60240880-60240899 None:intergenic 25.0%
! ATGAAATTTAAACTGACTAG+AGG + chr7_4:60240881-60240900 None:intergenic 25.0%
! TCTAGTCAGTTTAAATTTCA+TGG - chr7_4:60240880-60240899 Msa1167760:intron 25.0%
! CTAGTCAGTTTAAATTTCAT+GGG - chr7_4:60240881-60240900 Msa1167760:intron 25.0%
! TAATGTATAAGATACTGTTC+TGG + chr7_4:60240929-60240948 None:intergenic 25.0%
! GAACAGTATCTTATACATTA+TGG - chr7_4:60240929-60240948 Msa1167760:intron 25.0%
! ATATGCAATAAAGGAAATGA+TGG + chr7_4:60241532-60241551 None:intergenic 25.0%
!! TGTGCATATAATAGTTTTCA+TGG - chr7_4:60241735-60241754 Msa1167760:CDS 25.0%
! AACATTATCTACAAAAACTG+GGG + chr7_4:60241763-60241782 None:intergenic 25.0%
! GAACATTATCTACAAAAACT+GGG + chr7_4:60241764-60241783 None:intergenic 25.0%
! TGAACATTATCTACAAAAAC+TGG + chr7_4:60241765-60241784 None:intergenic 25.0%
!! TATTCTTTGGAAAACATACT+GGG - chr7_4:60241797-60241816 Msa1167760:intron 25.0%
! AGTCGATGTTTATTTATTGT+CGG - chr7_4:60241823-60241842 Msa1167760:intron 25.0%
ATAGGGAAAACTAAAAAGAG+AGG + chr7_4:60236926-60236945 None:intergenic 30.0%
TGAACGTAAAATTCTTTAGC+AGG + chr7_4:60237400-60237419 None:intergenic 30.0%
! TTTTACGTTCAGATTGATAC+TGG - chr7_4:60237409-60237428 Msa1167760:CDS 30.0%
CCATAAAAGATGGTTAAAAG+GGG - chr7_4:60237704-60237723 Msa1167760:intron 30.0%
!!! TATGTATTTTGACGTGATCA+TGG - chr7_4:60237987-60238006 Msa1167760:CDS 30.0%
!!! ATGTATTTTGACGTGATCAT+GGG - chr7_4:60237988-60238007 Msa1167760:CDS 30.0%
AATCCTCATGATGTTATTGA+TGG - chr7_4:60238063-60238082 Msa1167760:intron 30.0%
ATACCATCAATAACATCATG+AGG + chr7_4:60238069-60238088 None:intergenic 30.0%
! GATGTTATTGATGGTATGAT+AGG - chr7_4:60238072-60238091 Msa1167760:intron 30.0%
GAAAAGAGAACATACTGTAA+TGG + chr7_4:60238525-60238544 None:intergenic 30.0%
ATAGGAGAAGAAAACATTGA+AGG + chr7_4:60238555-60238574 None:intergenic 30.0%
! AATGTTTTCTTCTCCTATCT+CGG - chr7_4:60238557-60238576 Msa1167760:intron 30.0%
! AAAATTTGTTCAACCGAGAT+AGG + chr7_4:60238573-60238592 None:intergenic 30.0%
!! AATCACTCTGAAATTTATCC+AGG - chr7_4:60238676-60238695 Msa1167760:intron 30.0%
!! ATCACTCTGAAATTTATCCA+GGG - chr7_4:60238677-60238696 Msa1167760:intron 30.0%
AGAAACATTACGTAAGCTAA+GGG + chr7_4:60238821-60238840 None:intergenic 30.0%
TAGAAACATTACGTAAGCTA+AGG + chr7_4:60238822-60238841 None:intergenic 30.0%
AGTTAGTACAATGAAATGGA+AGG + chr7_4:60238929-60238948 None:intergenic 30.0%
! AAAATTTTGTTCTTGGCAAG+AGG + chr7_4:60239015-60239034 None:intergenic 30.0%
GATTCACATTCATTTACCAA+GGG + chr7_4:60239131-60239150 None:intergenic 30.0%
CTTAGCAAAATGAAAATGCA+TGG - chr7_4:60239230-60239249 Msa1167760:intron 30.0%
ACTGCAAGTTATTTGACAAT+GGG + chr7_4:60239424-60239443 None:intergenic 30.0%
AACTGCAAGTTATTTGACAA+TGG + chr7_4:60239425-60239444 None:intergenic 30.0%
CAAATACATCTTGATCGATT+GGG + chr7_4:60239558-60239577 None:intergenic 30.0%
GTGTTTCAAAAGTTTAAGAG+AGG + chr7_4:60239685-60239704 None:intergenic 30.0%
CTAGAACATGTTTAATACTG+AGG + chr7_4:60239897-60239916 None:intergenic 30.0%
TAATTGCTTACCTCACAAAT+TGG - chr7_4:60240030-60240049 Msa1167760:intron 30.0%
AATTGCTTACCTCACAAATT+GGG - chr7_4:60240031-60240050 Msa1167760:intron 30.0%
!!! ACTTTGTTTTGTGAAAACAG+GGG - chr7_4:60240076-60240095 Msa1167760:intron 30.0%
AACCATCAATTTAGACAGTA+AGG - chr7_4:60240159-60240178 Msa1167760:intron 30.0%
TCTGTAATAAAGTTCACTCA+TGG + chr7_4:60240256-60240275 None:intergenic 30.0%
CAAGATTCAATGCTATCATT+TGG + chr7_4:60240365-60240384 None:intergenic 30.0%
!!! ATCTAGAACTTTTTTTGACG+GGG + chr7_4:60240491-60240510 None:intergenic 30.0%
!!! CATCTAGAACTTTTTTTGAC+GGG + chr7_4:60240492-60240511 None:intergenic 30.0%
CTAGATGTTACATTATGCAT+TGG - chr7_4:60240505-60240524 Msa1167760:intron 30.0%
!! CACTGATTTACATATCTCAA+CGG - chr7_4:60240664-60240683 Msa1167760:CDS 30.0%
! TGGTTTCCTTTGGAAATAAT+GGG + chr7_4:60240728-60240747 None:intergenic 30.0%
AGAATTGAAATAACCTGGTT+GGG + chr7_4:60240763-60240782 None:intergenic 30.0%
TGACATCTCAGAAATCATAA+TGG + chr7_4:60240821-60240840 None:intergenic 30.0%
!! ATGATTTCTGAGATGTCATT+TGG - chr7_4:60240823-60240842 Msa1167760:intron 30.0%
TCTTATACATTATGGTTTCC+TGG - chr7_4:60240937-60240956 Msa1167760:intron 30.0%
! ATTTTTCTTCTTGCCTAAGT+AGG - chr7_4:60240988-60241007 Msa1167760:intron 30.0%
TCTCTCGTTTGATTATGATA+CGG - chr7_4:60241202-60241221 Msa1167760:CDS 30.0%
AGACATATCCACTATTCAAT+AGG + chr7_4:60241325-60241344 None:intergenic 30.0%
! AGATCATTACTCTTGTTATC+CGG - chr7_4:60241377-60241396 Msa1167760:intron 30.0%
! AAGGAGCATATATGCAATAA+AGG + chr7_4:60241541-60241560 None:intergenic 30.0%
! CTATTCTTTGGAAAACATAC+TGG - chr7_4:60241796-60241815 Msa1167760:intron 30.0%
! ATTCTTTGGAAAACATACTG+GGG - chr7_4:60241798-60241817 Msa1167760:intron 30.0%
ATACCCTTCATAATTAGGAA+CGG - chr7_4:60241847-60241866 Msa1167760:intron 30.0%
! ATCTTTTCCCAATTAGTATG+TGG - chr7_4:60241913-60241932 Msa1167760:CDS 30.0%
!! TGATATACTTCTGAAGTTGA+TGG - chr7_4:60241994-60242013 Msa1167760:CDS 30.0%
AGTTACAACACAACATTGAT+TGG + chr7_4:60242065-60242084 None:intergenic 30.0%
GTTATATGTATACTTGCTCT+TGG - chr7_4:60242131-60242150 Msa1167760:five_prime_UTR 30.0%
AGCAACGGTAATGTAATAGA+TGG + chr7_4:60236995-60237014 None:intergenic 35.0%
AAATATGTGCGTTCCTTTGT+TGG - chr7_4:60237026-60237045 Msa1167760:three_prime_UTR 35.0%
ATACCCAACTAAGTAAGGAT+CGG + chr7_4:60237253-60237272 None:intergenic 35.0%
GCATGAAGATTGAGAAAGAA+TGG + chr7_4:60237277-60237296 None:intergenic 35.0%
CTCAATCTTCATGCATTCTT+TGG - chr7_4:60237283-60237302 Msa1167760:three_prime_UTR 35.0%
! CCCCTTTTAACCATCTTTTA+TGG + chr7_4:60237707-60237726 None:intergenic 35.0%
!! TCTTCATCTACCGTTGTTTT+TGG - chr7_4:60238030-60238049 Msa1167760:intron 35.0%
!!! CTTCATCTACCGTTGTTTTT+GGG - chr7_4:60238031-60238050 Msa1167760:intron 35.0%
CAATAACATCATGAGGATTG+AGG + chr7_4:60238062-60238081 None:intergenic 35.0%
TCTTATTGGGATGATTGTTC+TGG - chr7_4:60238272-60238291 Msa1167760:intron 35.0%
!! GGATGATTGTTCTGGAAAAT+AGG - chr7_4:60238280-60238299 Msa1167760:intron 35.0%
!!! AAGGCAGTTGATGGAATTTT+TGG - chr7_4:60238342-60238361 Msa1167760:intron 35.0%
!!! AGGCAGTTGATGGAATTTTT+GGG - chr7_4:60238343-60238362 Msa1167760:intron 35.0%
!!! GTTGATGGAATTTTTGGGTT+TGG - chr7_4:60238348-60238367 Msa1167760:intron 35.0%
ATATCACAAGTGTCATCACA+AGG - chr7_4:60238390-60238409 Msa1167760:CDS 35.0%
AAGCAATGAGAGAACACTTT+GGG + chr7_4:60238423-60238442 None:intergenic 35.0%
TAAGCAATGAGAGAACACTT+TGG + chr7_4:60238424-60238443 None:intergenic 35.0%
AGTGTTCTCTCATTGCTTAA+AGG - chr7_4:60238425-60238444 Msa1167760:intron 35.0%
GTGTTCTCTCATTGCTTAAA+GGG - chr7_4:60238426-60238445 Msa1167760:intron 35.0%
!! ACTGGTTCTTGGTGAAATTT+TGG - chr7_4:60238470-60238489 Msa1167760:intron 35.0%
!! GAAACATAAAGCACTGTTAG+TGG - chr7_4:60238751-60238770 Msa1167760:intron 35.0%
TGGTACTGTAAATCGATGTT+TGG - chr7_4:60238850-60238869 Msa1167760:intron 35.0%
TGTTGCAAAAGTAATAGGTC+TGG - chr7_4:60238966-60238985 Msa1167760:intron 35.0%
GTTGCAAAAGTAATAGGTCT+GGG - chr7_4:60238967-60238986 Msa1167760:intron 35.0%
GTCTGGGTATTTGTATGTTT+GGG - chr7_4:60238983-60239002 Msa1167760:intron 35.0%
AAGAAACCAACATCTGTGTT+AGG + chr7_4:60239089-60239108 None:intergenic 35.0%
GGATTCACATTCATTTACCA+AGG + chr7_4:60239132-60239151 None:intergenic 35.0%
TGGTAAATGAATGTGAATCC+TGG - chr7_4:60239132-60239151 Msa1167760:intron 35.0%
GCAAATACATCTTGATCGAT+TGG + chr7_4:60239559-60239578 None:intergenic 35.0%
GATCAAGATGTATTTGCAAC+AGG - chr7_4:60239562-60239581 Msa1167760:CDS 35.0%
! CGAGGAACTATAATTGATTC+CGG - chr7_4:60239592-60239611 Msa1167760:CDS 35.0%
! AATTGATTCCGGTACTACAT+TGG - chr7_4:60239603-60239622 Msa1167760:intron 35.0%
GATCATAAGCTTCTTGAACA+AGG + chr7_4:60239633-60239652 None:intergenic 35.0%
! GAACTTACAGCATTGAGAAA+AGG + chr7_4:60239655-60239674 None:intergenic 35.0%
! CTGTAATGACTTGGAGTAAT+AGG - chr7_4:60239821-60239840 Msa1167760:intron 35.0%
ATTGCTTACCTCACAAATTG+GGG - chr7_4:60240032-60240051 Msa1167760:intron 35.0%
AAAATACTCCCCAATTTGTG+AGG + chr7_4:60240043-60240062 None:intergenic 35.0%
AGTTGAAGTGTGTGAAAAAG+TGG + chr7_4:60240110-60240129 None:intergenic 35.0%
CTCCTTACTGTCTAAATTGA+TGG + chr7_4:60240164-60240183 None:intergenic 35.0%
GTAGCAGAAACATTAGAAAG+GGG + chr7_4:60240317-60240336 None:intergenic 35.0%
GGTAGCAGAAACATTAGAAA+GGG + chr7_4:60240318-60240337 None:intergenic 35.0%
TGGTAGCAGAAACATTAGAA+AGG + chr7_4:60240319-60240338 None:intergenic 35.0%
! TTTCTAATGTTTCTGCTACC+AGG - chr7_4:60240318-60240337 Msa1167760:intron 35.0%
ATGCTATCATTTGGACTCTT+GGG + chr7_4:60240356-60240375 None:intergenic 35.0%
AATGCTATCATTTGGACTCT+TGG + chr7_4:60240357-60240376 None:intergenic 35.0%
AGATATGTAAATCAGTGCAC+GGG + chr7_4:60240661-60240680 None:intergenic 35.0%
GAGATATGTAAATCAGTGCA+CGG + chr7_4:60240662-60240681 None:intergenic 35.0%
TTTGGAAAATTGTGACACAG+TGG + chr7_4:60240705-60240724 None:intergenic 35.0%
TCCAAACCCATTATTTCCAA+AGG - chr7_4:60240719-60240738 Msa1167760:CDS 35.0%
!! TCCTTTGGAAATAATGGGTT+TGG + chr7_4:60240723-60240742 None:intergenic 35.0%
! CTGGTTTCCTTTGGAAATAA+TGG + chr7_4:60240729-60240748 None:intergenic 35.0%
GAGAATTGAAATAACCTGGT+TGG + chr7_4:60240764-60240783 None:intergenic 35.0%
GTCAGAGAATTGAAATAACC+TGG + chr7_4:60240768-60240787 None:intergenic 35.0%
GTCAGTTTAAATTTCATGGG+TGG - chr7_4:60240884-60240903 Msa1167760:intron 35.0%
!!! CTGTTCTGGTTTTAAAACCA+TGG + chr7_4:60240915-60240934 None:intergenic 35.0%
AAGAGAAAGACATAGTTACC+AGG + chr7_4:60240958-60240977 None:intergenic 35.0%
ATGCATCAGACAATTATCAG+TGG + chr7_4:60241036-60241055 None:intergenic 35.0%
! CAGAAGGGATACACAATTTT+AGG - chr7_4:60241111-60241130 Msa1167760:CDS 35.0%
! AAGGGATACACAATTTTAGG+AGG - chr7_4:60241114-60241133 Msa1167760:CDS 35.0%
!! AATTTTAGGAGGTTAGAAGC+TGG - chr7_4:60241125-60241144 Msa1167760:CDS 35.0%
CTCTCGTTTGATTATGATAC+GGG - chr7_4:60241203-60241222 Msa1167760:CDS 35.0%
TATTCAATAGGCCCACAAAT+GGG + chr7_4:60241313-60241332 None:intergenic 35.0%
GACTTAGCTAATCAACGAAT+TGG - chr7_4:60241480-60241499 Msa1167760:intron 35.0%
TAGCTAATCAACGAATTGGA+TGG - chr7_4:60241484-60241503 Msa1167760:intron 35.0%
GGTTAACTCACAATCATAGT+CGG + chr7_4:60241511-60241530 None:intergenic 35.0%
AATCCTTACAAGTTGCAACT+TGG + chr7_4:60241704-60241723 None:intergenic 35.0%
AAGAGTCGAAAGCTATTCTT+TGG - chr7_4:60241784-60241803 Msa1167760:intron 35.0%
TACCCTTCATAATTAGGAAC+GGG - chr7_4:60241848-60241867 Msa1167760:intron 35.0%
GCAGTTTCCACATACTAATT+GGG + chr7_4:60241923-60241942 None:intergenic 35.0%
CAATTAGTATGTGGAAACTG+CGG - chr7_4:60241922-60241941 Msa1167760:CDS 35.0%
GTTTATAGTCTGACATCAGA+TGG + chr7_4:60242158-60242177 None:intergenic 35.0%
TCAAGAGAAAGATAACTCCC+CGG + chr7_4:60237102-60237121 None:intergenic 40.0%
! GTTCAACTTGGTGGTTAAGA+GGG + chr7_4:60237134-60237153 None:intergenic 40.0%
! AGTTCAACTTGGTGGTTAAG+AGG + chr7_4:60237135-60237154 None:intergenic 40.0%
ATTCTTGACTTCTCAGTCCA+AGG - chr7_4:60237222-60237241 Msa1167760:three_prime_UTR 40.0%
ATGGCATACCCAACTAAGTA+AGG + chr7_4:60237258-60237277 None:intergenic 40.0%
AATACTTGCCCCAAATCTAG+TGG - chr7_4:60237457-60237476 Msa1167760:CDS 40.0%
ACCCCTAAACCACTAGATTT+GGG + chr7_4:60237469-60237488 None:intergenic 40.0%
CGCTCTGCAGTAAATAGTAA+GGG + chr7_4:60237557-60237576 None:intergenic 40.0%
TCGCTCTGCAGTAAATAGTA+AGG + chr7_4:60237558-60237577 None:intergenic 40.0%
GTGTTCTTATGCGGTTCAAA+CGG - chr7_4:60237870-60237889 Msa1167760:intron 40.0%
! TGCAGCTACACTTTTCAGTA+TGG - chr7_4:60237925-60237944 Msa1167760:intron 40.0%
! GCAGCTACACTTTTCAGTAT+GGG - chr7_4:60237926-60237945 Msa1167760:intron 40.0%
! CAGCTACACTTTTCAGTATG+GGG - chr7_4:60237927-60237946 Msa1167760:intron 40.0%
! TACACTTTTCAGTATGGGGA+TGG - chr7_4:60237931-60237950 Msa1167760:intron 40.0%
! GATATAACAGACAAAGCACC+AGG + chr7_4:60238375-60238394 None:intergenic 40.0%
TCTCATTGCTTAAAGGGACA+GGG - chr7_4:60238432-60238451 Msa1167760:intron 40.0%
! ACATACTGTAATGGGACAAG+TGG + chr7_4:60238516-60238535 None:intergenic 40.0%
AAGGATGCAAATACTTTCCC+TGG + chr7_4:60238697-60238716 None:intergenic 40.0%
! AAGCTAAGGGTACAAAATGG+TGG + chr7_4:60238808-60238827 None:intergenic 40.0%
! CGTAAGCTAAGGGTACAAAA+TGG + chr7_4:60238811-60238830 None:intergenic 40.0%
GGTCTGGGTATTTGTATGTT+TGG - chr7_4:60238982-60239001 Msa1167760:intron 40.0%
!! AAGGGTATCAGAGAAGAACA+TGG + chr7_4:60239113-60239132 None:intergenic 40.0%
ATGTTCTTCTCTGATACCCT+TGG - chr7_4:60239112-60239131 Msa1167760:intron 40.0%
GCAAATGCTTTACTACTTCC+AGG + chr7_4:60239153-60239172 None:intergenic 40.0%
ACAATGCATTGTTAAGGCCA+GGG + chr7_4:60239207-60239226 None:intergenic 40.0%
AACAATGCATTGTTAAGGCC+AGG + chr7_4:60239208-60239227 None:intergenic 40.0%
GTCTTATCAGACATAATGCC+TGG - chr7_4:60239464-60239483 Msa1167760:CDS 40.0%
TTTGCAACAGGTAACAATCG+AGG - chr7_4:60239574-60239593 Msa1167760:CDS 40.0%
AAGGTATGCCAATGTAGTAC+CGG + chr7_4:60239614-60239633 None:intergenic 40.0%
! GCTTTTCTGTCTCAATCAGA+AGG - chr7_4:60239848-60239867 Msa1167760:intron 40.0%
ATATGTCCAATCCGCAAAGA+CGG - chr7_4:60239923-60239942 Msa1167760:intron 40.0%
TAGACCTTAAACCGTCTTTG+CGG + chr7_4:60239937-60239956 None:intergenic 40.0%
AAGTGTGTGAAAAAGTGGCA+AGG + chr7_4:60240105-60240124 None:intergenic 40.0%
!! AAAGGGGTCCACTATTTTTC+AGG + chr7_4:60240301-60240320 None:intergenic 40.0%
CTGCAACGTAAATCAATGTC+TGG - chr7_4:60240459-60240478 Msa1167760:intron 40.0%
CTATAGGGTGTGTTTAACAG+AGG - chr7_4:60240578-60240597 Msa1167760:intron 40.0%
!! CAGATAACACTGGTTTCCTT+TGG + chr7_4:60240738-60240757 None:intergenic 40.0%
CAAAGGAAACCAGTGTTATC+TGG - chr7_4:60240736-60240755 Msa1167760:CDS 40.0%
! GATTTTTGCTCATTCAGCCT+AGG - chr7_4:60240845-60240864 Msa1167760:intron 40.0%
CTAGAGGGAATATATCACCT+AGG + chr7_4:60240865-60240884 None:intergenic 40.0%
! TGGTTTCCAAAAAGTGCAGA+AGG - chr7_4:60241095-60241114 Msa1167760:CDS 40.0%
! GGTTTCCAAAAAGTGCAGAA+GGG - chr7_4:60241096-60241115 Msa1167760:CDS 40.0%
! TGTATCCCTTCTGCACTTTT+TGG + chr7_4:60241104-60241123 None:intergenic 40.0%
AGCACCATGTTGCTCTTAAA+GGG + chr7_4:60241243-60241262 None:intergenic 40.0%
TAGCACCATGTTGCTCTTAA+AGG + chr7_4:60241244-60241263 None:intergenic 40.0%
!! AACATGGTGCTATACAGTTC+CGG - chr7_4:60241252-60241271 Msa1167760:CDS 40.0%
CTATTCAATAGGCCCACAAA+TGG + chr7_4:60241314-60241333 None:intergenic 40.0%
TTTGTGGGCCTATTGAATAG+TGG - chr7_4:60241314-60241333 Msa1167760:intron 40.0%
CACAGAGACATTTACAGCTA+AGG + chr7_4:60241605-60241624 None:intergenic 40.0%
CTTAGCTGTAAATGTCTCTG+TGG - chr7_4:60241603-60241622 Msa1167760:intron 40.0%
TCTCCAAGTTGCAACTTGTA+AGG - chr7_4:60241698-60241717 Msa1167760:CDS 40.0%
GTTGCAACTTGTAAGGATTG+TGG - chr7_4:60241705-60241724 Msa1167760:CDS 40.0%
TCGGCATACCCTTCATAATT+AGG - chr7_4:60241842-60241861 Msa1167760:intron 40.0%
CTCCCGTTCCTAATTATGAA+GGG + chr7_4:60241853-60241872 None:intergenic 40.0%
ACTCCCGTTCCTAATTATGA+AGG + chr7_4:60241854-60241873 None:intergenic 40.0%
CGCAGTTTCCACATACTAAT+TGG + chr7_4:60241924-60241943 None:intergenic 40.0%
! CACAACATTGATTGGTAGAG+TGG + chr7_4:60242057-60242076 None:intergenic 40.0%
GTGTTGTAACTGTAACTCAG+TGG - chr7_4:60242074-60242093 Msa1167760:exon 40.0%
TATGTGCGTTCCTTTGTTGG+TGG - chr7_4:60237029-60237048 Msa1167760:three_prime_UTR 45.0%
! AACTTGGTGGTTAAGAGGGA+TGG + chr7_4:60237130-60237149 None:intergenic 45.0%
TGAGAGTGGTGAGTTCAACT+TGG + chr7_4:60237146-60237165 None:intergenic 45.0%
ACCTCCGATCCTTACTTAGT+TGG - chr7_4:60237246-60237265 Msa1167760:three_prime_UTR 45.0%
CCTCCGATCCTTACTTAGTT+GGG - chr7_4:60237247-60237266 Msa1167760:three_prime_UTR 45.0%
TGCCCCAAATCTAGTGGTTT+AGG - chr7_4:60237463-60237482 Msa1167760:CDS 45.0%
GCCCCAAATCTAGTGGTTTA+GGG - chr7_4:60237464-60237483 Msa1167760:CDS 45.0%
CCCCTAAACCACTAGATTTG+GGG + chr7_4:60237468-60237487 None:intergenic 45.0%
CCCCAAATCTAGTGGTTTAG+GGG - chr7_4:60237465-60237484 Msa1167760:CDS 45.0%
CACCCCTAAACCACTAGATT+TGG + chr7_4:60237470-60237489 None:intergenic 45.0%
TGATCCGGTGTGTTCTTATG+CGG - chr7_4:60237861-60237880 Msa1167760:intron 45.0%
TGAACCGCATAAGAACACAC+CGG + chr7_4:60237868-60237887 None:intergenic 45.0%
TACAAGTCAGTGCTCTTCTC+AGG - chr7_4:60237894-60237913 Msa1167760:intron 45.0%
TTTCAGTATGGGGATGGAAG+TGG - chr7_4:60237937-60237956 Msa1167760:intron 45.0%
TTCAGTATGGGGATGGAAGT+GGG - chr7_4:60237938-60237957 Msa1167760:intron 45.0%
GAGGACTCACCCAAAAACAA+CGG + chr7_4:60238043-60238062 None:intergenic 45.0%
AGTGTGCTCAATGTAGGGTT+GGG - chr7_4:60238098-60238117 Msa1167760:intron 45.0%
!!! GGAATTTTTGGGTTTGGTCC+TGG - chr7_4:60238354-60238373 Msa1167760:CDS 45.0%
ACAAGTGTCATCACAAGGCA+TGG - chr7_4:60238395-60238414 Msa1167760:CDS 45.0%
CTCTCATTGCTTAAAGGGAC+AGG - chr7_4:60238431-60238450 Msa1167760:intron 45.0%
CAACATCTGTGTTAGGAGAG+GGG + chr7_4:60239082-60239101 None:intergenic 45.0%
CCAACATCTGTGTTAGGAGA+GGG + chr7_4:60239083-60239102 None:intergenic 45.0%
ACCAACATCTGTGTTAGGAG+AGG + chr7_4:60239084-60239103 None:intergenic 45.0%
! TTTGGGTGTTTTTCATGCCC+TGG - chr7_4:60239187-60239206 Msa1167760:intron 45.0%
CCTGAAATTCGATCAACACC+AGG + chr7_4:60239485-60239504 None:intergenic 45.0%
!! CCTGGTGTTGATCGAATTTC+AGG - chr7_4:60239482-60239501 Msa1167760:CDS 45.0%
!! CTTCAAAGCATTGCGGTCAA+TGG - chr7_4:60239523-60239542 Msa1167760:CDS 45.0%
CTTAAACCGTCTTTGCGGAT+TGG + chr7_4:60239932-60239951 None:intergenic 45.0%
CAATCCGCAAAGACGGTTTA+AGG - chr7_4:60239930-60239949 Msa1167760:intron 45.0%
ATCGTGACTCATGAGTACCT+TGG + chr7_4:60240007-60240026 None:intergenic 45.0%
AACACACTGCCATTGCAGTA+AGG - chr7_4:60240222-60240241 Msa1167760:intron 45.0%
GAATCTTGAGACTAGACACC+TGG - chr7_4:60240377-60240396 Msa1167760:intron 45.0%
TGTAAATCAGTGCACGGGAA+AGG + chr7_4:60240656-60240675 None:intergenic 45.0%
CACGAGAACTACTCCTACTT+AGG + chr7_4:60241004-60241023 None:intergenic 45.0%
!! TATAGGATGGTGCTGCAATG+TGG - chr7_4:60241067-60241086 Msa1167760:intron 45.0%
! TTCCCCCTTTAAGAGCAACA+TGG - chr7_4:60241236-60241255 Msa1167760:CDS 45.0%
CACCATGTTGCTCTTAAAGG+GGG + chr7_4:60241241-60241260 None:intergenic 45.0%
GCACCATGTTGCTCTTAAAG+GGG + chr7_4:60241242-60241261 None:intergenic 45.0%
GAAGGATCAGACCCATTTGT+GGG - chr7_4:60241299-60241318 Msa1167760:CDS 45.0%
ACTGCGGATCTCACTGTAAA+AGG - chr7_4:60241938-60241957 Msa1167760:CDS 45.0%
CTGCGGATCTCACTGTAAAA+GGG - chr7_4:60241939-60241958 Msa1167760:CDS 45.0%
AGGGCTCTGTTGTTGAGAAA+TGG - chr7_4:60241958-60241977 Msa1167760:CDS 45.0%
!! TTATATTTAATATTATTAGT+TGG + chr7_4:60240135-60240154 None:intergenic 5.0%
!! CGTTCCTTTGTTGGTGGCTT+TGG - chr7_4:60237035-60237054 Msa1167760:three_prime_UTR 50.0%
GAGTGGTGAGTTCAACTTGG+TGG + chr7_4:60237143-60237162 None:intergenic 50.0%
!! TATGTCGCGAGCTTTGAGAG+TGG + chr7_4:60237160-60237179 None:intergenic 50.0%
AGTAAGGATCGGAGGTTCCT+TGG + chr7_4:60237242-60237261 None:intergenic 50.0%
CCCAACTAAGTAAGGATCGG+AGG + chr7_4:60237250-60237269 None:intergenic 50.0%
! AGGGAGAGTGTGCTCAATGT+AGG - chr7_4:60238092-60238111 Msa1167760:intron 50.0%
! GGGAGAGTGTGCTCAATGTA+GGG - chr7_4:60238093-60238112 Msa1167760:intron 50.0%
GAGTGTGCTCAATGTAGGGT+TGG - chr7_4:60238097-60238116 Msa1167760:intron 50.0%
AGGTGTAGCACCTATCAGTC+TGG - chr7_4:60238300-60238319 Msa1167760:intron 50.0%
GGTGTAGCACCTATCAGTCT+GGG - chr7_4:60238301-60238320 Msa1167760:intron 50.0%
GTGTAGCACCTATCAGTCTG+GGG - chr7_4:60238302-60238321 Msa1167760:intron 50.0%
CACCTATCAGTCTGGGGATT+TGG - chr7_4:60238308-60238327 Msa1167760:intron 50.0%
AGCCAAATCCCCAGACTGAT+AGG + chr7_4:60238313-60238332 None:intergenic 50.0%
ATCAGTCTGGGGATTTGGCT+CGG - chr7_4:60238313-60238332 Msa1167760:intron 50.0%
!! GGATTTGGCTCGGACAGAAA+AGG - chr7_4:60238323-60238342 Msa1167760:intron 50.0%
CGGACAGAAAAGGCAGTTGA+TGG - chr7_4:60238333-60238352 Msa1167760:intron 50.0%
CCCTCTCCTAACACAGATGT+TGG - chr7_4:60239080-60239099 Msa1167760:intron 50.0%
GAGACACAGCCTTACTGCAA+TGG + chr7_4:60240234-60240253 None:intergenic 50.0%
TTGGACTCTTGGGTAGATGC+TGG + chr7_4:60240346-60240365 None:intergenic 50.0%
TGGTTGGGACCAGATAACAC+TGG + chr7_4:60240748-60240767 None:intergenic 50.0%
AGTGTTATCTGGTCCCAACC+AGG - chr7_4:60240747-60240766 Msa1167760:CDS 50.0%
! TTTCATGGGTGGAGCATCCA+TGG - chr7_4:60240895-60240914 Msa1167760:intron 50.0%
!! ATGGTGCTATACAGTTCCGG+TGG - chr7_4:60241255-60241274 Msa1167760:CDS 50.0%
GGAAGGATCAGACCCATTTG+TGG - chr7_4:60241298-60241317 Msa1167760:CDS 50.0%
! TAAATTGGTGCTCGCTGCTC+AGG - chr7_4:60241577-60241596 Msa1167760:intron 50.0%
TGTGGCTACGAGCAAGAGTA+AGG - chr7_4:60241621-60241640 Msa1167760:intron 50.0%
AAGGATGCATACCTCAGTGC+AGG - chr7_4:60241640-60241659 Msa1167760:CDS 50.0%
!! TTGGTAGAGTGGAAGTGCTC+TGG + chr7_4:60242046-60242065 None:intergenic 50.0%
GGCGCTCGAATCTTGCAAGA+CGG - chr7_4:60237189-60237208 Msa1167760:three_prime_UTR 55.0%
GCTCGAATCTTGCAAGACGG+CGG - chr7_4:60237192-60237211 Msa1167760:three_prime_UTR 55.0%
! GCTGGTTTCCTGCTCTGATC+CGG - chr7_4:60237846-60237865 Msa1167760:intron 55.0%
AGAACACACCGGATCAGAGC+AGG + chr7_4:60237857-60237876 None:intergenic 55.0%
TGCTTAAAGGGACAGGGCAG+TGG - chr7_4:60238438-60238457 Msa1167760:intron 55.0%
TTAAAGGGACAGGGCAGTGG+AGG - chr7_4:60238441-60238460 Msa1167760:intron 55.0%
!! GGAGGAGGCATACTGGTTCT+TGG - chr7_4:60238459-60238478 Msa1167760:intron 55.0%
CTTGGGTAGATGCTGGATCC+TGG + chr7_4:60240339-60240358 None:intergenic 55.0%
! GGTGCTGCAATGTGGTGCAT+TGG - chr7_4:60241075-60241094 Msa1167760:CDS 55.0%
CACTCATCTGTCCTGCACTG+AGG + chr7_4:60241654-60241673 None:intergenic 55.0%
GGAGAGAACGCTGATGTGTG+AGG + chr7_4:60241683-60241702 None:intergenic 55.0%
GCGGCCAAAGCCACCAACAA+AGG + chr7_4:60237042-60237061 None:intergenic 60.0%
!! GTTGGTGGCTTTGGCCGCAA+TGG - chr7_4:60237044-60237063 Msa1167760:three_prime_UTR 60.0%
TTTGGCCGCAATGGCGGTGA+CGG - chr7_4:60237053-60237072 Msa1167760:three_prime_UTR 60.0%
CGTAACCGTCACCGCCATTG+CGG + chr7_4:60237061-60237080 None:intergenic 60.0%
! CGCAATGGCGGTGACGGTTA+CGG - chr7_4:60237059-60237078 Msa1167760:three_prime_UTR 60.0%
GTGACGGTTACGGCCGTATG+CGG - chr7_4:60237069-60237088 Msa1167760:three_prime_UTR 60.0%
GCTCGCGACATAGCTCGTCA+CGG - chr7_4:60237168-60237187 Msa1167760:three_prime_UTR 60.0%
ATCTTGCAAGACGGCGGTGC+TGG - chr7_4:60237198-60237217 Msa1167760:three_prime_UTR 60.0%
CGCAGCAGTGGATGAACTCG+CGG + chr7_4:60237827-60237846 None:intergenic 60.0%
GAGTTCATCCACTGCTGCGC+TGG - chr7_4:60237828-60237847 Msa1167760:intron 60.0%
CTGTGTTAGGAGAGGGGAGC+TGG + chr7_4:60239076-60239095 None:intergenic 60.0%
!! GGTGGCTTTGGCCGCAATGG+CGG - chr7_4:60237047-60237066 Msa1167760:three_prime_UTR 65.0%
ACGGTTACGGCCGTATGCGG+CGG - chr7_4:60237072-60237091 Msa1167760:three_prime_UTR 65.0%
! GGCCGTATGCGGCGGTTTTC+CGG - chr7_4:60237080-60237099 Msa1167760:three_prime_UTR 65.0%
! GCCGTATGCGGCGGTTTTCC+GGG - chr7_4:60237081-60237100 Msa1167760:three_prime_UTR 65.0%
CCCCGGAAAACCGCCGCATA+CGG + chr7_4:60237085-60237104 None:intergenic 65.0%
! CCGTATGCGGCGGTTTTCCG+GGG - chr7_4:60237082-60237101 Msa1167760:three_prime_UTR 65.0%
GCAGGAAACCAGCGCAGCAG+TGG + chr7_4:60237839-60237858 None:intergenic 65.0%
GGGGATGGAAGTGGGACGTC+TGG - chr7_4:60237946-60237965 Msa1167760:intron 65.0%
AAGGGACAGGGCAGTGGAGG+AGG - chr7_4:60238444-60238463 Msa1167760:intron 65.0%
! GGGCAGTGGAGGAGGCATAC+TGG - chr7_4:60238452-60238471 Msa1167760:intron 65.0%
AGTTCCGGTGGTCCACCGCA+GGG - chr7_4:60241267-60241286 Msa1167760:CDS 65.0%
TCCTTCCCTAGACCCCCCTG+CGG + chr7_4:60241285-60241304 None:intergenic 65.0%
CAGTTCCGGTGGTCCACCGC+AGG - chr7_4:60241266-60241285 Msa1167760:CDS 70.0%
GTTCCGGTGGTCCACCGCAG+GGG - chr7_4:60241268-60241287 Msa1167760:CDS 70.0%
TTCCGGTGGTCCACCGCAGG+GGG - chr7_4:60241269-60241288 Msa1167760:CDS 70.0%
GTCCACCGCAGGGGGGTCTA+GGG - chr7_4:60241277-60241296 Msa1167760:CDS 70.0%
TTCCCTAGACCCCCCTGCGG+TGG + chr7_4:60241282-60241301 None:intergenic 70.0%
ACCGCAGGGGGGTCTAGGGA+AGG - chr7_4:60241281-60241300 Msa1167760:CDS 70.0%
TCCGGTGGTCCACCGCAGGG+GGG - chr7_4:60241270-60241289 Msa1167760:CDS 75.0%
ACCCCCCTGCGGTGGACCAC+CGG + chr7_4:60241274-60241293 None:intergenic 75.0%
GGTCCACCGCAGGGGGGTCT+AGG - chr7_4:60241276-60241295 Msa1167760:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60236909 60242211 60236909 ID=Msa1167760;Name=Msa1167760
chr7_4 mRNA 60236909 60242211 60236909 ID=Msa1167760-mRNA-1;Parent=Msa1167760;Name=Msa1167760-mRNA-1;_AED=0.15;_eAED=0.15;_QI=101|1|1|1|0.9|0.81|11|437|494
chr7_4 exon 60236909 60237521 60236909 ID=Msa1167760-mRNA-1:exon:18845;Parent=Msa1167760-mRNA-1
chr7_4 exon 60237601 60237672 60237601 ID=Msa1167760-mRNA-1:exon:18844;Parent=Msa1167760-mRNA-1
chr7_4 exon 60237985 60238048 60237985 ID=Msa1167760-mRNA-1:exon:18843;Parent=Msa1167760-mRNA-1
chr7_4 exon 60238162 60238258 60238162 ID=Msa1167760-mRNA-1:exon:18842;Parent=Msa1167760-mRNA-1
chr7_4 exon 60238352 60238425 60238352 ID=Msa1167760-mRNA-1:exon:18841;Parent=Msa1167760-mRNA-1
chr7_4 exon 60239454 60239616 60239454 ID=Msa1167760-mRNA-1:exon:18840;Parent=Msa1167760-mRNA-1
chr7_4 exon 60240591 60240818 60240591 ID=Msa1167760-mRNA-1:exon:18839;Parent=Msa1167760-mRNA-1
chr7_4 exon 60241068 60241318 60241068 ID=Msa1167760-mRNA-1:exon:18838;Parent=Msa1167760-mRNA-1
chr7_4 exon 60241634 60241754 60241634 ID=Msa1167760-mRNA-1:exon:18837;Parent=Msa1167760-mRNA-1
chr7_4 exon 60241852 60242165 60241852 ID=Msa1167760-mRNA-1:exon:18836;Parent=Msa1167760-mRNA-1
chr7_4 exon 60242186 60242211 60242186 ID=Msa1167760-mRNA-1:exon:18835;Parent=Msa1167760-mRNA-1
chr7_4 five_prime_UTR 60242186 60242211 60242186 ID=Msa1167760-mRNA-1:five_prime_utr;Parent=Msa1167760-mRNA-1
chr7_4 five_prime_UTR 60242091 60242165 60242091 ID=Msa1167760-mRNA-1:five_prime_utr;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60241852 60242090 60241852 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60241634 60241754 60241634 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60241068 60241318 60241068 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60240591 60240818 60240591 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60239454 60239616 60239454 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60238352 60238425 60238352 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60238162 60238258 60238162 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60237985 60238048 60237985 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60237601 60237672 60237601 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 CDS 60237346 60237521 60237346 ID=Msa1167760-mRNA-1:cds;Parent=Msa1167760-mRNA-1
chr7_4 three_prime_UTR 60236909 60237345 60236909 ID=Msa1167760-mRNA-1:three_prime_utr;Parent=Msa1167760-mRNA-1
Gene Sequence

>Msa1167760

ATGTGCGTTCCTTTGTTGGTGGCTTTGGCCGCAATGGCGGTGACGGTTACGGCCGTATGCGGCGGTTTTCCGGGGAGTTATCTTTCTCTTGAACGAACCATCCCTCTTAACCACCAAGTTGAACTCACCACTCTCAAAGCTCGCGACATAGCTCGTCACGGCGCTCGAATCTTGCAAGACGGCGGTGCTGGCATTCTTGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTAGTTGGGTTGTATTTTACTAAAGTGAAGATGGGTTCTCCTGCTAAAGAATTTTACGTTCAGATTGATACTGGAAGTGATATATTATGGCTTAATTGCAATACTTGCCCCAAATCTAGTGGTTTAGGGATTGATCTCAATTACTTTGACACCGCGAGTTCATCCACTGCTGCGCTGGTTTCCTGCTCTGATCCGGTGTGTTCTTATGCGGTTCAAACGGCTACAAGTCAGTGCTCTTCTCAGGCTAATCAGTGCAGCTACACTTTTCAGTATGGGGATGGAAGTGGGACGTCTGGATATTATGTTTATGATGCTATGTATTTTGACGTGATCATGGGTCAGTCTGTGTTTTCTAACTCTTCATCTACCGTTGTTTTTGGGTGTAGCACCTATCAGTCTGGGGATTTGGCTCGGACAGAAAAGGCAGTTGATGGAATTTTTGGGTTTGGTCCTGGTGCTTTGTCTGTTATATCACAAGTGTCATCACAAGGCATGGCACCCAAAGTGTTCTCTCATTGCTTAAAGGGACAGGGCAGTGGAGGAGGCATACTGGTTCTTGGTGAAATTTTGGAGCCAAATATTGTTTATACTCCACTTGTCCCATTACAGCCTCATTATAATTTAAATCTTCAAAGCATTGCGGTCAATGGACAAATTCTCCCAATCGATCAAGATGTATTTGCAACAGGTAACAATCGAGGAACTATAATTGATTCCGGTACTACATTGGCATACCTTGTTCAAGAAGCTTATGATCCTTTTCTCAATGCTATAACTACCACTGTGTCACAATTTTCCAAACCCATTATTTCCAAAGGAAACCAGTGTTATCTGGTCCCAACCAGCCTAGGTGATATATTCCCTCTAGTCAGTTTAAATTTCATGGGTGGAGCATCCATGGTTTTAAAACCAGAACAGTATCTTATACATTATGGTTTCCTGGATGGTGCTGCAATGTGGTGCATTGGTTTCCAAAAAGTGCAGAAGGGATACACAATTTTAGGAGATCTTGTCCTCAAAGATAAGATTTTTGTATACGACTTAGCTAATCAACGAATTGGATGGACCGACTATGATTGTTCCTTAGCTGTAAATGTCTCTGTGGCTACGAGCAAGAGTAAGGATGCATACCTCAGTGCAGGACAGATGAGTGTTAGCTCCTCACACATCAGCGTTCTCTCCAAGTTGCAACTTGTAAGGATTGTGGCTTTTCTTGTGCATATAATAGTTTTCATGGAGCCCCAGTTTTTGTAG
Protein sequence

>Msa1167760

MCVPLLVALAAMAVTVTAVCGGFPGSYLSLERTIPLNHQVELTTLKARDIARHGARILQDGGAGILDFSVQGTSDPYLVGLYFTKVKMGSPAKEFYVQIDTGSDILWLNCNTCPKSSGLGIDLNYFDTASSSTAALVSCSDPVCSYAVQTATSQCSSQANQCSYTFQYGDGSGTSGYYVYDAMYFDVIMGQSVFSNSSSTVVFGCSTYQSGDLARTEKAVDGIFGFGPGALSVISQVSSQGMAPKVFSHCLKGQGSGGGILVLGEILEPNIVYTPLVPLQPHYNLNLQSIAVNGQILPIDQDVFATGNNRGTIIDSGTTLAYLVQEAYDPFLNAITTTVSQFSKPIISKGNQCYLVPTSLGDIFPLVSLNFMGGASMVLKPEQYLIHYGFLDGAAMWCIGFQKVQKGYTILGDLVLKDKIFVYDLANQRIGWTDYDCSLAVNVSVATSKSKDAYLSAGQMSVSSSHISVLSKLQLVRIVAFLVHIIVFMEPQFL*