AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167710 MtrunA17_Chr7g0265331 97.384 497 10 1 1 494 1 497 0.0 981
Msa1167710 MtrunA17_Chr1g0179751 69.502 482 133 7 17 490 46 521 0.0 664
Msa1167710 MtrunA17_Chr2g0320621 62.826 460 164 4 10 465 9 465 0.0 577
Msa1167710 MtrunA17_Chr4g0027681 58.898 472 187 5 28 494 25 494 0.0 563
Msa1167710 MtrunA17_Chr1g0189381 39.440 464 251 9 37 490 31 474 3.12e-105 322
Msa1167710 MtrunA17_Chr7g0249451 38.277 499 265 12 1 489 9 474 3.93e-99 306
Msa1167710 MtrunA17_Chr7g0221681 38.864 440 243 10 37 465 34 458 7.85e-98 303
Msa1167710 MtrunA17_Chr4g0053721 31.525 387 213 14 75 438 74 431 1.46e-44 166
Msa1167710 MtrunA17_Chr5g0401601 31.117 376 219 13 80 438 87 439 2.82e-43 162
Msa1167710 MtrunA17_Chr1g0159791 28.718 390 232 12 68 437 46 409 5.19e-39 146
Msa1167710 MtrunA17_Chr4g0019931 56.557 122 50 1 86 204 1 122 5.35e-38 135
Msa1167710 MtrunA17_Chr4g0010951 29.557 406 226 15 77 438 57 446 9.60e-36 138
Msa1167710 MtrunA17_Chr6g0484731 26.047 430 272 14 41 447 154 560 1.56e-35 139
Msa1167710 MtrunA17_Chr3g0130741 26.895 409 236 17 68 452 73 442 5.97e-32 127
Msa1167710 MtrunA17_Chr3g0130931 29.867 375 219 19 80 438 103 449 1.20e-30 124
Msa1167710 MtrunA17_Chr8g0371371 27.059 425 269 15 48 456 78 477 2.99e-30 123
Msa1167710 MtrunA17_Chr2g0307991 29.032 372 223 15 82 438 60 405 7.53e-29 118
Msa1167710 MtrunA17_Chr5g0406001 26.763 482 289 21 45 489 72 526 1.20e-28 119
Msa1167710 MtrunA17_Chr8g0384731 24.688 401 240 16 77 452 69 432 3.95e-28 116
Msa1167710 MtrunA17_Chr2g0310831 29.839 372 225 17 80 438 93 441 5.15e-28 116
Msa1167710 MtrunA17_Chr2g0308001 30.189 371 225 17 82 438 59 409 5.45e-28 116
Msa1167710 MtrunA17_Chr2g0310801 30.811 370 221 18 80 438 89 434 6.21e-28 115
Msa1167710 MtrunA17_Chr5g0430861 67.949 78 22 1 204 278 27 104 8.49e-28 107
Msa1167710 MtrunA17_Chr1g0212321 26.942 412 259 14 36 437 107 486 1.18e-27 115
Msa1167710 MtrunA17_Chr8g0352671 28.267 375 230 17 79 438 87 437 5.72e-27 113
Msa1167710 MtrunA17_Chr8g0371351 25.820 488 289 19 45 488 64 522 6.13e-27 114
Msa1167710 MtrunA17_Chr2g0310821 30.481 374 208 20 80 438 107 443 2.91e-26 111
Msa1167710 MtrunA17_Chr3g0095891 28.989 376 236 14 80 437 96 458 2.07e-25 108
Msa1167710 MtrunA17_Chr2g0291201 30.481 374 221 15 80 437 101 451 2.35e-25 108
Msa1167710 MtrunA17_Chr5g0395911 28.684 380 221 18 79 438 65 414 2.51e-25 107
Msa1167710 MtrunA17_Chr5g0435871 27.763 371 233 16 80 438 88 435 2.77e-25 108
Msa1167710 MtrunA17_Chr1g0210201 25.532 423 275 12 28 437 72 467 3.26e-25 108
Msa1167710 MtrunA17_Chr7g0275731 26.359 368 238 12 80 437 140 484 3.94e-25 108
Msa1167710 MtrunA17_Chr3g0078321 26.667 390 224 16 79 438 56 413 2.60e-24 105
Msa1167710 MtrunA17_Chr1g0165201 25.948 343 223 12 80 414 127 446 3.96e-24 105
Msa1167710 MtrunA17_Chr8g0386441 28.075 374 226 17 80 438 85 430 6.58e-24 103
Msa1167710 MtrunA17_Chr5g0435971 28.032 371 232 17 80 438 85 432 6.83e-24 103
Msa1167710 MtrunA17_Chr5g0442921 26.632 383 239 15 80 438 190 554 1.20e-23 104
Msa1167710 MtrunA17_Chr8g0352661 29.067 375 228 18 80 438 85 437 3.21e-23 102
Msa1167710 MtrunA17_Chr3g0124421 26.277 411 264 13 45 437 61 450 4.86e-23 102
Msa1167710 MtrunA17_Chr3g0087851 25.806 372 249 13 76 438 84 437 6.70e-23 101
Msa1167710 MtrunA17_Chr5g0419291 26.667 420 255 20 35 437 45 428 2.00e-22 99.8
Msa1167710 MtrunA17_Chr2g0312941 25.126 398 228 17 76 433 82 449 2.32e-22 99.8
Msa1167710 MtrunA17_Chr5g0415951 26.790 377 238 14 76 438 83 435 1.67e-21 97.1
Msa1167710 MtrunA17_Chr5g0395931 27.778 378 228 19 79 438 86 436 1.83e-21 96.7
Msa1167710 MtrunA17_Chr6g0484901 25.205 365 234 11 82 437 157 491 1.20e-20 94.7
Msa1167710 MtrunA17_Chr7g0239001 27.320 388 224 19 86 439 64 427 1.94e-20 93.6
Msa1167710 MtrunA17_Chr3g0099891 25.469 373 231 11 79 437 115 454 3.03e-20 93.2
Msa1167710 MtrunA17_Chr4g0023351 31.276 243 144 9 82 314 59 288 7.25e-20 90.1
Msa1167710 MtrunA17_Chr7g0267171 26.000 400 231 16 80 437 89 465 8.00e-20 92.0
Msa1167710 MtrunA17_Chr2g0333991 27.056 377 228 17 79 436 86 434 9.67e-20 91.7
Msa1167710 MtrunA17_Chr2g0307461 27.561 410 230 18 64 437 52 430 1.08e-19 91.3
Msa1167710 MtrunA17_Chr5g0425141 24.538 379 240 14 78 437 98 449 1.60e-19 91.7
Msa1167710 MtrunA17_Chr4g0001991 30.400 375 210 20 86 439 175 519 3.32e-19 90.5
Msa1167710 MtrunA17_Chr6g0457401 26.854 391 247 15 65 438 69 437 4.89e-19 89.4
Msa1167710 MtrunA17_Chr5g0395871 27.688 372 230 18 80 438 80 425 1.39e-18 88.2
Msa1167710 MtrunA17_Chr2g0309561 23.317 416 264 12 66 437 104 508 1.43e-18 88.6
Msa1167710 MtrunA17_Chr3g0110191 25.065 387 226 15 86 442 91 443 1.59e-18 87.8
Msa1167710 MtrunA17_Chr5g0434411 27.034 381 222 17 86 438 86 438 3.48e-18 87.0
Msa1167710 MtrunA17_Chr8g0353261 24.528 424 259 21 35 438 52 434 3.00e-17 84.0
Msa1167710 MtrunA17_Chr3g0099901 26.158 367 240 13 80 437 141 485 4.93e-17 83.6
Msa1167710 MtrunA17_Chr2g0311451 26.913 379 230 18 79 438 86 436 6.73e-17 82.8
Msa1167710 MtrunA17_Chr6g0486981 24.129 373 243 14 82 438 89 437 5.04e-16 80.1
Msa1167710 MtrunA17_Chr6g0487471 26.166 386 223 20 80 438 85 435 1.13e-15 79.3
Msa1167710 MtrunA17_Chr1g0164401 23.670 376 229 18 82 438 93 429 9.30e-15 76.3
Msa1167710 MtrunA17_Chr1g0179091 25.745 369 213 15 80 438 50 367 7.15e-14 73.2
Msa1167710 MtrunA17_Chr5g0395891 28.076 317 189 16 138 438 20 313 9.81e-14 72.0
Msa1167710 MtrunA17_Chr5g0434441 26.615 387 230 22 86 444 73 433 1.21e-13 72.8
Msa1167710 MtrunA17_Chr4g0061641 27.989 368 228 18 82 438 56 397 1.08e-12 69.7
Msa1167710 MtrunA17_Chr3g0133071 26.525 377 227 19 79 438 95 438 3.23e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167710 AT2G36670.2 62.553 470 163 5 24 485 38 502 0.0 599
Msa1167710 AT2G36670.1 61.895 475 163 6 24 485 38 507 0.0 593
Msa1167710 AT5G22850.1 60.593 472 178 6 22 489 24 491 0.0 590
Msa1167710 AT2G36670.4 63.350 412 144 3 77 485 29 436 0.0 537
Msa1167710 AT2G36670.3 63.350 412 144 3 77 485 29 436 0.0 537
Msa1167710 AT1G08210.1 55.464 485 205 8 5 485 10 487 3.66e-175 502
Msa1167710 AT1G08210.4 55.464 485 205 8 5 485 44 521 4.09e-175 503
Msa1167710 AT1G08210.3 55.464 485 205 8 5 485 58 535 5.15e-175 503
Msa1167710 AT1G08210.2 52.539 512 205 9 5 485 10 514 3.86e-169 487
Msa1167710 AT1G05840.1 41.106 416 222 9 39 444 43 445 9.10e-104 319
Msa1167710 AT3G02740.1 38.496 452 248 12 41 483 50 480 2.30e-102 315
Msa1167710 AT3G02740.2 39.078 412 227 10 81 483 9 405 8.81e-96 296
Msa1167710 AT5G36260.1 38.596 456 252 12 39 484 41 478 9.13e-95 296
Msa1167710 AT1G65240.1 36.761 457 252 12 42 488 40 469 2.43e-86 274
Msa1167710 AT3G42550.1 36.134 476 230 17 12 473 10 425 2.38e-80 257
Msa1167710 AT5G43100.2 30.978 368 222 13 80 438 74 418 3.28e-47 171
Msa1167710 AT5G43100.1 30.345 435 258 17 80 493 74 484 5.14e-47 172
Msa1167710 AT3G50050.1 30.424 401 232 15 56 438 66 437 5.27e-39 150
Msa1167710 AT1G44130.1 27.865 384 228 12 77 438 44 400 1.12e-37 143
Msa1167710 AT3G25700.1 28.682 387 232 14 80 439 82 451 2.53e-35 137
Msa1167710 AT4G33490.2 27.543 403 238 17 68 446 48 420 2.10e-34 134
Msa1167710 AT3G51350.1 25.768 423 274 15 29 437 56 452 1.15e-30 125
Msa1167710 AT1G77480.1 27.735 393 231 12 77 444 62 426 1.20e-30 124
Msa1167710 AT1G49050.2 25.840 387 237 13 81 437 29 395 3.66e-30 122
Msa1167710 AT1G77480.2 27.979 386 225 12 77 437 62 419 4.00e-30 122
Msa1167710 AT1G49050.1 25.840 387 245 13 77 437 198 568 4.03e-30 124
Msa1167710 AT3G51360.1 27.835 388 231 19 71 438 78 436 5.97e-30 122
Msa1167710 AT3G51360.7 27.559 381 227 19 78 438 1 352 7.24e-30 121
Msa1167710 AT3G51360.9 27.835 388 231 19 71 438 88 446 8.36e-30 122
Msa1167710 AT2G17760.1 27.321 377 224 14 81 437 103 449 1.02e-29 122
Msa1167710 AT1G25510.1 28.608 388 233 14 59 437 131 483 8.26e-28 116
Msa1167710 AT5G10080.1 28.075 374 233 13 81 437 99 453 1.36e-27 116
Msa1167710 AT3G51340.2 25.936 374 240 13 77 437 98 447 1.17e-26 113
Msa1167710 AT4G33490.1 27.679 336 203 14 68 386 45 357 1.27e-26 112
Msa1167710 AT3G51360.10 28.198 383 220 20 71 427 78 431 2.57e-26 111
Msa1167710 AT1G01300.1 28.455 369 231 13 80 438 140 485 2.86e-26 112
Msa1167710 AT3G51360.6 28.198 383 220 20 71 427 88 441 3.65e-26 111
Msa1167710 AT3G51330.3 28.418 373 233 13 81 438 101 454 3.71e-26 111
Msa1167710 AT2G03200.1 26.702 382 228 15 80 437 105 458 6.53e-26 110
Msa1167710 AT3G51330.1 28.495 372 232 13 81 437 101 453 7.14e-26 111
Msa1167710 AT5G02190.1 28.010 382 225 20 91 440 82 445 2.47e-25 108
Msa1167710 AT3G54400.1 28.883 367 222 17 82 438 88 425 2.62e-25 108
Msa1167710 AT2G23945.1 27.251 422 263 16 35 437 52 448 3.14e-25 108
Msa1167710 AT3G18490.1 29.189 370 221 15 80 437 160 500 3.18e-25 108
Msa1167710 AT3G51360.5 29.412 323 185 15 71 376 88 384 4.22e-25 107
Msa1167710 AT1G09750.1 28.495 372 231 14 79 438 101 449 4.59e-25 108
Msa1167710 AT3G51360.4 29.412 323 185 15 71 376 78 374 4.68e-25 107
Msa1167710 AT5G10770.1 28.142 366 235 12 80 438 130 474 5.59e-25 108
Msa1167710 AT4G30040.1 28.528 326 187 15 76 379 79 380 7.45e-24 104
Msa1167710 AT3G12700.1 23.298 382 262 12 72 438 96 461 3.62e-23 102
Msa1167710 AT3G51330.2 28.333 360 224 13 81 425 101 441 3.63e-23 102
Msa1167710 AT3G51340.3 26.814 317 198 11 77 380 98 393 2.89e-22 99.4
Msa1167710 AT3G61820.1 27.670 412 257 18 42 437 97 483 2.94e-22 100
Msa1167710 AT4G35880.1 25.789 380 225 17 81 437 106 451 2.95e-22 100
Msa1167710 AT2G42980.1 25.781 384 244 16 80 438 158 525 2.99e-22 100
Msa1167710 AT3G51360.2 29.391 279 161 13 71 339 88 340 3.10e-22 98.2
Msa1167710 AT1G49050.3 24.908 273 188 6 77 343 198 459 3.33e-22 99.8
Msa1167710 AT3G59080.1 26.302 384 240 15 80 438 168 533 1.23e-21 98.6
Msa1167710 AT2G35615.1 27.225 382 235 14 80 438 83 444 1.44e-21 97.8
Msa1167710 AT3G20015.1 27.358 424 246 19 37 432 76 465 2.45e-21 97.1
Msa1167710 AT3G51340.4 26.786 280 178 8 77 346 98 360 2.77e-21 96.3
Msa1167710 AT3G51340.1 25.000 384 243 15 77 437 98 459 4.49e-21 96.7
Msa1167710 AT5G45120.1 25.899 417 231 18 82 439 83 480 6.69e-21 95.9
Msa1167710 AT4G30030.1 24.332 374 237 14 82 439 78 421 9.55e-21 95.1
Msa1167710 AT1G66180.1 24.682 393 221 17 86 441 76 430 1.72e-20 94.4
Msa1167710 AT1G64830.1 28.941 425 247 20 35 438 39 429 5.23e-20 92.8
Msa1167710 AT4G35880.2 28.846 260 151 11 81 328 106 343 6.39e-20 92.4
Msa1167710 AT5G37540.1 24.282 383 235 14 86 439 84 440 9.41e-20 92.0
Msa1167710 AT2G39710.1 26.316 399 217 19 86 440 69 434 1.03e-19 92.0
Msa1167710 AT3G52500.1 24.583 480 266 19 23 438 21 468 2.76e-19 90.9
Msa1167710 AT2G28225.1 24.865 370 237 13 77 438 62 398 2.00e-18 87.8
Msa1167710 AT1G31450.1 28.421 380 231 14 80 438 83 442 2.20e-18 87.8
Msa1167710 AT3G51360.3 25.749 334 206 17 118 438 6 310 3.34e-18 86.7
Msa1167710 AT3G51360.8 25.749 334 206 17 118 438 6 310 3.34e-18 86.7
Msa1167710 AT2G28040.1 24.528 371 230 16 82 442 65 395 1.86e-16 81.6
Msa1167710 AT2G28040.2 24.528 371 230 16 82 442 56 386 2.03e-16 81.6
Msa1167710 AT2G28220.1 24.599 374 235 16 80 442 65 402 2.29e-16 81.6
Msa1167710 AT5G33340.1 27.660 376 227 17 80 438 88 435 3.60e-16 81.3
Msa1167710 AT2G28030.1 27.476 313 172 14 81 379 60 331 4.05e-16 80.5
Msa1167710 AT3G59080.2 24.869 382 212 15 80 438 168 497 5.50e-15 77.8
Msa1167710 AT5G10760.1 25.867 375 221 18 80 437 130 464 1.03e-14 76.6
Msa1167710 AT1G79720.1 25.464 377 235 16 82 439 135 484 6.86e-14 74.3
Msa1167710 AT2G28010.1 23.990 396 233 17 69 442 47 396 8.01e-14 73.6
Msa1167710 AT5G07030.1 26.720 378 219 19 82 438 115 455 1.51e-13 73.2
Msa1167710 AT3G25700.2 29.630 135 88 3 80 211 82 212 2.17e-11 65.9

Find 148 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAGTTTCCACATACTAAT+TGG 0.138204 7_4:+60200386 None:intergenic
ACTGGTTCTTGGTGAAATTT+TGG 0.154711 7_4:-60203838 Msa1167710:CDS
ACTGCGGATCTCACTGTAAA+AGG 0.201454 7_4:-60200369 Msa1167710:three_prime_UTR
TCGGCATACCCTTCATAATT+AGG 0.214703 7_4:-60200465 Msa1167710:three_prime_UTR
CTGGTTTCCTTTGGAAATAA+TGG 0.224910 7_4:+60201581 None:intergenic
GAACAGTATCTTATACATTA+TGG 0.258657 7_4:-60201378 Msa1167710:CDS
CACCTATCAGTCTGGGGATT+TGG 0.259412 7_4:-60204000 Msa1167710:CDS
AAGAGTCGAAAGCTATTCTT+TGG 0.271201 7_4:-60200523 Msa1167710:three_prime_UTR
ATACTGGAAGTGATATATTA+TGG 0.272156 7_4:-60204881 Msa1167710:CDS
AGTGGAGTATAAACAATATT+TGG 0.278370 7_4:+60203813 None:intergenic
TGCCCCAAATCTAGTGGTTT+AGG 0.279897 7_4:-60204843 Msa1167710:CDS
TCTAGTCAGTTTAAATTTCA+TGG 0.291876 7_4:-60201427 Msa1167710:CDS
CACCCCTAAACCACTAGATT+TGG 0.292899 7_4:+60204839 None:intergenic
GCCCCAAATCTAGTGGTTTA+GGG 0.294640 7_4:-60204842 Msa1167710:CDS
ACCCCTAAACCACTAGATTT+GGG 0.310974 7_4:+60204840 None:intergenic
CTATTCTTTGGAAAACATAC+TGG 0.315547 7_4:-60200511 Msa1167710:three_prime_UTR
CGTTCCTTTGTTGGTGGCTT+TGG 0.316845 7_4:-60205271 Msa1167710:CDS
TGATATACTTCTGAAGTTGA+TGG 0.326352 7_4:-60200313 Msa1167710:three_prime_UTR
TCCTTTGGAAATAATGGGTT+TGG 0.336132 7_4:+60201587 None:intergenic
AGTGTTCTCTCATTGCTTAA+AGG 0.338954 7_4:-60203883 Msa1167710:CDS
TCTTATACATTATGGTTTCC+TGG 0.344892 7_4:-60201370 Msa1167710:intron
TGGTTTCCTTTGGAAATAAT+GGG 0.357720 7_4:+60201582 None:intergenic
CAAAGGAAACCAGTGTTATC+TGG 0.358026 7_4:-60201571 Msa1167710:CDS
GTGTTCTCTCATTGCTTAAA+GGG 0.374201 7_4:-60203882 Msa1167710:CDS
GACTTAGCTAATCAACGAAT+TGG 0.375931 7_4:-60200827 Msa1167710:CDS
ATCTTGCAAGACGGCGGTGC+TGG 0.375992 7_4:-60205108 Msa1167710:CDS
CAGATAACACTGGTTTCCTT+TGG 0.377630 7_4:+60201572 None:intergenic
GGGGATGGAAGTGGGACGTC+TGG 0.382505 7_4:-60204362 Msa1167710:CDS
AAAAGAGAACATACTGTAAT+GGG 0.384501 7_4:+60203787 None:intergenic
CTCTCATTGCTTAAAGGGAC+AGG 0.395990 7_4:-60203877 Msa1167710:CDS
GTTATATGTATACTTGCTCT+TGG 0.400490 7_4:-60200176 Msa1167710:three_prime_UTR
TCTCCAAGTTGCAACTTGTA+AGG 0.402644 7_4:-60200609 Msa1167710:CDS
AGTTACAACACAACATTGAT+TGG 0.410709 7_4:+60200245 None:intergenic
CTTCAAAGCATTGCGGTCAA+TGG 0.410851 7_4:-60202785 Msa1167710:CDS
AGGTGTAGCACCTATCAGTC+TGG 0.411075 7_4:-60204008 Msa1167710:CDS
AAGCAATGAGAGAACACTTT+GGG 0.415774 7_4:+60203888 None:intergenic
CGCAATGGCGGTGACGGTTA+CGG 0.415896 7_4:-60205247 Msa1167710:CDS
CGAGGAACTATAATTGATTC+CGG 0.417921 7_4:-60202716 Msa1167710:CDS
ACCTCCGATCCTTACTTAGT+TGG 0.422270 7_4:-60205060 Msa1167710:CDS
GGAGGAGGCATACTGGTTCT+TGG 0.423837 7_4:-60203849 Msa1167710:CDS
GAGTTCATCCACTGCTGCGC+TGG 0.433717 7_4:-60204480 Msa1167710:CDS
AGTTCAACTTGGTGGTTAAG+AGG 0.434274 7_4:+60205174 None:intergenic
TGAACGTAAAATTCTTTAGC+AGG 0.437141 7_4:+60204909 None:intergenic
AAGGGACAGGGCAGTGGAGG+AGG 0.437682 7_4:-60203864 Msa1167710:CDS
TAATGTATAAGATACTGTTC+TGG 0.437790 7_4:+60201381 None:intergenic
GCAAATACATCTTGATCGAT+TGG 0.441686 7_4:+60202752 None:intergenic
GATCAAGATGTATTTGCAAC+AGG 0.445817 7_4:-60202746 Msa1167710:CDS
AGTCGATGTTTATTTATTGT+CGG 0.453220 7_4:-60200484 Msa1167710:three_prime_UTR
GAAAAGAGAACATACTGTAA+TGG 0.456462 7_4:+60203786 None:intergenic
CCTCCGATCCTTACTTAGTT+GGG 0.457265 7_4:-60205059 Msa1167710:intron
AAATATGTGCGTTCCTTTGT+TGG 0.457373 7_4:-60205280 Msa1167710:exon
AGGGCTCTGTTGTTGAGAAA+TGG 0.457570 7_4:-60200349 Msa1167710:three_prime_UTR
GTGTTCTTATGCGGTTCAAA+CGG 0.458370 7_4:-60204438 Msa1167710:CDS
CAAATACATCTTGATCGATT+GGG 0.458939 7_4:+60202753 None:intergenic
CGGACAGAAAAGGCAGTTGA+TGG 0.459842 7_4:-60203975 Msa1167710:CDS
AGTAAGGATCGGAGGTTCCT+TGG 0.460466 7_4:+60205067 None:intergenic
AGCAACGGTAATGTAATAGA+TGG 0.461628 7_4:+60205314 None:intergenic
TACAAGTCAGTGCTCTTCTC+AGG 0.463939 7_4:-60204414 Msa1167710:CDS
GAACTTACAGCATTGAGAAA+AGG 0.465695 7_4:+60202656 None:intergenic
GCAGTTTCCACATACTAATT+GGG 0.466227 7_4:+60200387 None:intergenic
TACCCTTCATAATTAGGAAC+GGG 0.468220 7_4:-60200459 Msa1167710:three_prime_UTR
TGCTTAAAGGGACAGGGCAG+TGG 0.470903 7_4:-60203870 Msa1167710:CDS
AGCCAAATCCCCAGACTGAT+AGG 0.472138 7_4:+60203998 None:intergenic
CTAGTCAGTTTAAATTTCAT+GGG 0.472537 7_4:-60201426 Msa1167710:CDS
GAGAGGTGAAGTCAAGTCAA+TGG 0.473716 7_4:+60205400 None:intergenic
AGAATTGAAATAACCTGGTT+GGG 0.473934 7_4:+60201547 None:intergenic
ATGGCATACCCAACTAAGTA+AGG 0.478104 7_4:+60205051 None:intergenic
AACTTGGTGGTTAAGAGGGA+TGG 0.484441 7_4:+60205179 None:intergenic
TTTCAGTATGGGGATGGAAG+TGG 0.485519 7_4:-60204371 Msa1167710:CDS
TGAAGATTTAAATTATAATG+AGG 0.489504 7_4:+60202803 None:intergenic
GGGCAGTGGAGGAGGCATAC+TGG 0.491596 7_4:-60203856 Msa1167710:CDS
CTGCGGATCTCACTGTAAAA+GGG 0.494612 7_4:-60200368 Msa1167710:three_prime_UTR
AATCCTTACAAGTTGCAACT+TGG 0.495945 7_4:+60200606 None:intergenic
CCCCGGAAAACCGCCGCATA+CGG 0.497048 7_4:+60205224 None:intergenic
ACTCCCGTTCCTAATTATGA+AGG 0.498900 7_4:+60200456 None:intergenic
TTTGGCCGCAATGGCGGTGA+CGG 0.499664 7_4:-60205253 Msa1167710:CDS
ATGAAATTTAAACTGACTAG+AGG 0.499853 7_4:+60201429 None:intergenic
GCTGGTTTCCTGCTCTGATC+CGG 0.500916 7_4:-60204462 Msa1167710:CDS
TGTGGCTACGAGCAAGAGTA+AGG 0.501253 7_4:-60200686 Msa1167710:CDS
TCCAAACCCATTATTTCCAA+AGG 0.504188 7_4:-60201588 Msa1167710:CDS
TTTCATGGGTGGAGCATCCA+TGG 0.509541 7_4:-60201412 Msa1167710:CDS
GAGAATTGAAATAACCTGGT+TGG 0.510837 7_4:+60201546 None:intergenic
TATTCTTTGGAAAACATACT+GGG 0.512983 7_4:-60200510 Msa1167710:three_prime_UTR
GTTGGTGGCTTTGGCCGCAA+TGG 0.524773 7_4:-60205262 Msa1167710:CDS
GGTGCTGCAATGTGGTGCAT+TGG 0.527548 7_4:-60201232 Msa1167710:CDS
GAGTGGTGAGTTCAACTTGG+TGG 0.527798 7_4:+60205166 None:intergenic
GTCAGTTTAAATTTCATGGG+TGG 0.529169 7_4:-60201423 Msa1167710:CDS
AATTGATTCCGGTACTACAT+TGG 0.535206 7_4:-60202705 Msa1167710:CDS
CACAGAGACATTTACAGCTA+AGG 0.535686 7_4:+60200705 None:intergenic
GCAGGAAACCAGCGCAGCAG+TGG 0.535985 7_4:+60204472 None:intergenic
GGATTTGGCTCGGACAGAAA+AGG 0.537030 7_4:-60203985 Msa1167710:CDS
GGTGTAGCACCTATCAGTCT+GGG 0.537155 7_4:-60204007 Msa1167710:CDS
CACAACATTGATTGGTAGAG+TGG 0.537521 7_4:+60200253 None:intergenic
TTCAGTATGGGGATGGAAGT+GGG 0.538847 7_4:-60204370 Msa1167710:CDS
ATTCTTGACTTCTCAGTCCA+AGG 0.539154 7_4:-60205084 Msa1167710:CDS
AAGGATGCATACCTCAGTGC+AGG 0.544723 7_4:-60200667 Msa1167710:CDS
ATCAGTCTGGGGATTTGGCT+CGG 0.545545 7_4:-60203995 Msa1167710:CDS
TATGTGCGTTCCTTTGTTGG+TGG 0.552020 7_4:-60205277 Msa1167710:CDS
GTTGCAACTTGTAAGGATTG+TGG 0.554985 7_4:-60200602 Msa1167710:CDS
GTTTATAGTCTGACATCAGA+TGG 0.555614 7_4:+60200152 None:intergenic
TAGCTAATCAACGAATTGGA+TGG 0.564681 7_4:-60200823 Msa1167710:CDS
TGAGAGTGGTGAGTTCAACT+TGG 0.565316 7_4:+60205163 None:intergenic
TTAAAGGGACAGGGCAGTGG+AGG 0.565332 7_4:-60203867 Msa1167710:CDS
AAGGTATGCCAATGTAGTAC+CGG 0.566914 7_4:+60202697 None:intergenic
AGAACACACCGGATCAGAGC+AGG 0.568832 7_4:+60204454 None:intergenic
TTGGTAGAGTGGAAGTGCTC+TGG 0.570808 7_4:+60200264 None:intergenic
CCCCAAATCTAGTGGTTTAG+GGG 0.574664 7_4:-60204841 Msa1167710:intron
GTTCAACTTGGTGGTTAAGA+GGG 0.578619 7_4:+60205175 None:intergenic
TAAGCAATGAGAGAACACTT+TGG 0.581749 7_4:+60203887 None:intergenic
ACATACTGTAATGGGACAAG+TGG 0.583639 7_4:+60203795 None:intergenic
GGTGGCTTTGGCCGCAATGG+CGG 0.587107 7_4:-60205259 Msa1167710:CDS
CTCCCGTTCCTAATTATGAA+GGG 0.591005 7_4:+60200457 None:intergenic
TGAAATTTAAACTGACTAGA+GGG 0.591214 7_4:+60201430 None:intergenic
AGTGTTATCTGGTCCCAACC+AGG 0.596045 7_4:-60201560 Msa1167710:intron
GCGGCCAAAGCCACCAACAA+AGG 0.599752 7_4:+60205267 None:intergenic
AATACTTGCCCCAAATCTAG+TGG 0.602756 7_4:-60204849 Msa1167710:CDS
CGCAGCAGTGGATGAACTCG+CGG 0.603450 7_4:+60204484 None:intergenic
GCTCGAATCTTGCAAGACGG+CGG 0.607214 7_4:-60205114 Msa1167710:CDS
ACAAGTGTCATCACAAGGCA+TGG 0.607410 7_4:-60203913 Msa1167710:CDS
TCTCATTGCTTAAAGGGACA+GGG 0.615083 7_4:-60203876 Msa1167710:CDS
TGATCCGGTGTGTTCTTATG+CGG 0.615317 7_4:-60204447 Msa1167710:CDS
TTTAAATCTTCAAAGCATTG+CGG 0.618339 7_4:-60202792 Msa1167710:CDS
ATACCCTTCATAATTAGGAA+CGG 0.625211 7_4:-60200460 Msa1167710:three_prime_UTR
CCCCTAAACCACTAGATTTG+GGG 0.625821 7_4:+60204841 None:intergenic
CCCAACTAAGTAAGGATCGG+AGG 0.631666 7_4:+60205059 None:intergenic
GATCATAAGCTTCTTGAACA+AGG 0.632728 7_4:+60202678 None:intergenic
GATATAACAGACAAAGCACC+AGG 0.635071 7_4:+60203936 None:intergenic
ATACCCAACTAAGTAAGGAT+CGG 0.635525 7_4:+60205056 None:intergenic
GGCGCTCGAATCTTGCAAGA+CGG 0.636787 7_4:-60205117 Msa1167710:CDS
CTTAGCTGTAAATGTCTCTG+TGG 0.642439 7_4:-60200704 Msa1167710:CDS
TCAAGAGAAAGATAACTCCC+CGG 0.649451 7_4:+60205207 None:intergenic
GGTTAACTCACAATCATAGT+CGG 0.650073 7_4:+60200799 None:intergenic
CGTAACCGTCACCGCCATTG+CGG 0.659994 7_4:+60205248 None:intergenic
TATAGGATGGTGCTGCAATG+TGG 0.667848 7_4:-60201240 Msa1167710:intron
CTAGAGGGAATATATCACCT+AGG 0.670693 7_4:+60201445 None:intergenic
GCTCGCGACATAGCTCGTCA+CGG 0.680562 7_4:-60205138 Msa1167710:CDS
TATGTCGCGAGCTTTGAGAG+TGG 0.684708 7_4:+60205149 None:intergenic
ATATCACAAGTGTCATCACA+AGG 0.690052 7_4:-60203918 Msa1167710:CDS
TTTGCAACAGGTAACAATCG+AGG 0.690870 7_4:-60202734 Msa1167710:CDS
CAATTAGTATGTGGAAACTG+CGG 0.692656 7_4:-60200385 Msa1167710:three_prime_UTR
ATTCTTTGGAAAACATACTG+GGG 0.695529 7_4:-60200509 Msa1167710:three_prime_UTR
GTGTAGCACCTATCAGTCTG+GGG 0.699129 7_4:-60204006 Msa1167710:CDS
GGAGAGAACGCTGATGTGTG+AGG 0.705847 7_4:+60200627 None:intergenic
TGGTTGGGACCAGATAACAC+TGG 0.716713 7_4:+60201562 None:intergenic
CACTCATCTGTCCTGCACTG+AGG 0.721081 7_4:+60200656 None:intergenic
GTGTTGTAACTGTAACTCAG+TGG 0.758256 7_4:-60200233 Msa1167710:three_prime_UTR
TGAACCGCATAAGAACACAC+CGG 0.788703 7_4:+60204443 None:intergenic
TTTGGAAAATTGTGACACAG+TGG 0.790362 7_4:+60201605 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACTATTATATTTTAGATTTA+AGG - chr7_4:60200942-60200961 Msa1167710:intron 10.0%
!!! CTATTATATTTTAGATTTAA+GGG - chr7_4:60200943-60200962 Msa1167710:intron 10.0%
!!! TATTATATTTTAGATTTAAG+GGG - chr7_4:60200944-60200963 Msa1167710:intron 10.0%
!! GATGTAATAAATATTTAAAA+AGG + chr7_4:60201923-60201942 None:intergenic 10.0%
!!! TTTTTTTTTTTCTTTTCTAT+AGG - chr7_4:60203770-60203789 Msa1167710:intron 10.0%
!!! TTTTTTTTTTCTTTTCTATA+GGG - chr7_4:60203771-60203790 Msa1167710:intron 10.0%
!!! ATTTGTTTTAATAATAGCAA+CGG + chr7_4:60200219-60200238 None:intergenic 15.0%
!! AAATAATAAACCATAAAAGA+TGG - chr7_4:60200901-60200920 Msa1167710:intron 15.0%
!!! ATTATATTTTAGATTTAAGG+GGG - chr7_4:60200945-60200964 Msa1167710:intron 15.0%
!! TTTGAATTGAATATAGAAAT+TGG - chr7_4:60202548-60202567 Msa1167710:intron 15.0%
!! TGAAGATTTAAATTATAATG+AGG + chr7_4:60202715-60202734 None:intergenic 15.0%
!! TTATTAAGAAAAAATAGTGA+CGG + chr7_4:60203002-60203021 None:intergenic 15.0%
!! TAAATTACAGTTAATATTTG+CGG + chr7_4:60203624-60203643 None:intergenic 15.0%
!! AAAATCAATACTAAAATTAC+CGG + chr7_4:60204607-60204626 None:intergenic 15.0%
!! AAGAAAGAATGAAATGAATA+GGG + chr7_4:60200152-60200171 None:intergenic 20.0%
!! AAAGAAAGAATGAAATGAAT+AGG + chr7_4:60200153-60200172 None:intergenic 20.0%
!!! TATTTTACTAAAGTGAAGAT+GGG - chr7_4:60200579-60200598 Msa1167710:CDS 20.0%
!!! TAATTAGAAGTTTAGAACAT+GGG - chr7_4:60200797-60200816 Msa1167710:intron 20.0%
!!! TAGGTGAAATTTTGAAATAT+TGG - chr7_4:60201446-60201465 Msa1167710:CDS 20.0%
!!! TTGGTTTTAATTGATCTTAT+TGG - chr7_4:60201465-60201484 Msa1167710:intron 20.0%
!!! TGGTTTTAATTGATCTTATT+GGG - chr7_4:60201466-60201485 Msa1167710:intron 20.0%
!! TTAAAGATTAATTGCTTGTT+TGG - chr7_4:60201850-60201869 Msa1167710:intron 20.0%
!!! GTAATGTTTCTAATTTTGTT+TGG - chr7_4:60202037-60202056 Msa1167710:intron 20.0%
!!! AATGTAGAAAATTTTGTTCT+TGG + chr7_4:60202229-60202248 None:intergenic 20.0%
!!! TCAATACAGTATTTTTATGA+AGG - chr7_4:60202251-60202270 Msa1167710:intron 20.0%
!!! CAATACAGTATTTTTATGAA+GGG - chr7_4:60202252-60202271 Msa1167710:intron 20.0%
!! ATTGAATATAGAAATTGGTA+TGG - chr7_4:60202553-60202572 Msa1167710:intron 20.0%
!! ATATTAAGTTCTTAAAATGC+TGG - chr7_4:60202592-60202611 Msa1167710:intron 20.0%
!! TGATAAATAAATTTGGAGAA+CGG + chr7_4:60202955-60202974 None:intergenic 20.0%
!! TTCTCCAAATTTATTTATCA+GGG - chr7_4:60202955-60202974 Msa1167710:intron 20.0%
!! TAAAATAAACTGTAATGACT+TGG - chr7_4:60203019-60203038 Msa1167710:intron 20.0%
!! AAGGTCAGATTATTAATTTA+AGG - chr7_4:60203074-60203093 Msa1167710:intron 20.0%
!! ACAATAAATCATATATACCA+AGG - chr7_4:60203194-60203213 Msa1167710:intron 20.0%
!!! ATGCATTACTTGTTTTTTAT+AGG - chr7_4:60204258-60204277 Msa1167710:intron 20.0%
!!! ATTACTTGTTTTTTATAGGA+TGG - chr7_4:60204262-60204281 Msa1167710:intron 20.0%
!! ATACAAAAATCTTATCTTTG+AGG + chr7_4:60204666-60204685 None:intergenic 20.0%
!! TTAAGATTATGACAATGTAA+AGG + chr7_4:60204768-60204787 None:intergenic 20.0%
!! ACATTGTCATAATCTTAAAT+TGG - chr7_4:60204770-60204789 Msa1167710:intron 20.0%
! ACTAAGAATTAATCTTGTTC+AGG - chr7_4:60200553-60200572 Msa1167710:exon 25.0%
!! GTATTTTACTAAAGTGAAGA+TGG - chr7_4:60200578-60200597 Msa1167710:CDS 25.0%
! ATACTGGAAGTGATATATTA+TGG - chr7_4:60200634-60200653 Msa1167710:CDS 25.0%
!! GTAATTAGAAGTTTAGAACA+TGG - chr7_4:60200796-60200815 Msa1167710:intron 25.0%
! GCTATCAAGCTTAATTATAA+TGG - chr7_4:60200819-60200838 Msa1167710:CDS 25.0%
! AACCATAAAAGATGGTTAAA+AGG - chr7_4:60200909-60200928 Msa1167710:intron 25.0%
! ACCATAAAAGATGGTTAAAA+GGG - chr7_4:60200910-60200929 Msa1167710:intron 25.0%
!!! GGTAATGCTTAATGTTATTT+TGG - chr7_4:60200966-60200985 Msa1167710:intron 25.0%
!! ATGTTATTGATGGTATGATA+GGG - chr7_4:60201280-60201299 Msa1167710:intron 25.0%
! ATATATGAAATCTTGTCACT+AGG - chr7_4:60201427-60201446 Msa1167710:CDS 25.0%
! AGTGGAGTATAAACAATATT+TGG + chr7_4:60201705-60201724 None:intergenic 25.0%
! AAAAGAGAACATACTGTAAT+GGG + chr7_4:60201731-60201750 None:intergenic 25.0%
! ATCAATGTGATGCAAAATTA+GGG + chr7_4:60201804-60201823 None:intergenic 25.0%
! TATCAATGTGATGCAAAATT+AGG + chr7_4:60201805-60201824 None:intergenic 25.0%
!! TTTGCATCACATTGATAATA+AGG - chr7_4:60201808-60201827 Msa1167710:intron 25.0%
!! TTGCATCACATTGATAATAA+GGG - chr7_4:60201809-60201828 Msa1167710:intron 25.0%
!!! CTCGATTACAATTTTTTGAA+AGG - chr7_4:60202107-60202126 Msa1167710:intron 25.0%
! AAACAGTTAGTACAATGAAA+TGG + chr7_4:60202140-60202159 None:intergenic 25.0%
! TTTCATTGTACTAACTGTTT+AGG - chr7_4:60202140-60202159 Msa1167710:intron 25.0%
! TTCATTGTACTAACTGTTTA+GGG - chr7_4:60202141-60202160 Msa1167710:intron 25.0%
! ATTCTTGTTGCAAAAGTAAT+AGG - chr7_4:60202168-60202187 Msa1167710:intron 25.0%
!! TTGCATTCTATTTTCTCTTT+TGG - chr7_4:60202376-60202395 Msa1167710:intron 25.0%
!! TGCATTCTATTTTCTCTTTT+GGG - chr7_4:60202377-60202396 Msa1167710:intron 25.0%
! AAGAAAACAATGCATTGTTA+AGG + chr7_4:60202420-60202439 None:intergenic 25.0%
!! AAAATGAAAATGCATGGTTT+TGG - chr7_4:60202443-60202462 Msa1167710:intron 25.0%
!! ATTAGAACAATTGTGTTGTT+TGG + chr7_4:60202513-60202532 None:intergenic 25.0%
! TTATTTGACAATGGGAATAA+TGG + chr7_4:60202623-60202642 None:intergenic 25.0%
!!! TTTAAATCTTCAAAGCATTG+CGG - chr7_4:60202723-60202742 Msa1167710:CDS 25.0%
! GTTCTCCAAATTTATTTATC+AGG - chr7_4:60202954-60202973 Msa1167710:intron 25.0%
! TGTTCCCTGATAAATAAATT+TGG + chr7_4:60202962-60202981 None:intergenic 25.0%
! TATATGACAAGTCTTCTTTA+TGG - chr7_4:60203162-60203181 Msa1167710:intron 25.0%
! ATATGACAAGTCTTCTTTAT+GGG - chr7_4:60203163-60203182 Msa1167710:intron 25.0%
!!! TTCACAAAACAAAGTTTTGT+GGG + chr7_4:60203278-60203297 None:intergenic 25.0%
!! TTTCACAAAACAAAGTTTTG+TGG + chr7_4:60203279-60203298 None:intergenic 25.0%
!!! AAACTTTGTTTTGTGAAAAC+AGG - chr7_4:60203281-60203300 Msa1167710:intron 25.0%
!!! AACTTTGTTTTGTGAAAACA+GGG - chr7_4:60203282-60203301 Msa1167710:intron 25.0%
! ACTATGATGAAGTTACATTA+AGG - chr7_4:60203396-60203415 Msa1167710:intron 25.0%
! AATGTTTACCTGAAAAATAG+TGG - chr7_4:60203497-60203516 Msa1167710:intron 25.0%
! TTACGTTAACAAAAAAGAAG+TGG - chr7_4:60203641-60203660 Msa1167710:intron 25.0%
!!! ACATCTAGAACTTTTTTTGA+CGG + chr7_4:60203700-60203719 None:intergenic 25.0%
! TGAAATTTAAACTGACTAGA+GGG + chr7_4:60204088-60204107 None:intergenic 25.0%
! ATGAAATTTAAACTGACTAG+AGG + chr7_4:60204089-60204108 None:intergenic 25.0%
! TCTAGTCAGTTTAAATTTCA+TGG - chr7_4:60204088-60204107 Msa1167710:intron 25.0%
! CTAGTCAGTTTAAATTTCAT+GGG - chr7_4:60204089-60204108 Msa1167710:intron 25.0%
! TAATGTATAAGATACTGTTC+TGG + chr7_4:60204137-60204156 None:intergenic 25.0%
! GAACAGTATCTTATACATTA+TGG - chr7_4:60204137-60204156 Msa1167710:intron 25.0%
! ATATGCAATAAAGGAAATGA+TGG + chr7_4:60204740-60204759 None:intergenic 25.0%
!! TGTGCATATAATAGTTTTCA+TGG - chr7_4:60204943-60204962 Msa1167710:CDS 25.0%
! AACATTATCTACAAAAACTG+GGG + chr7_4:60204971-60204990 None:intergenic 25.0%
! GAACATTATCTACAAAAACT+GGG + chr7_4:60204972-60204991 None:intergenic 25.0%
! TGAACATTATCTACAAAAAC+TGG + chr7_4:60204973-60204992 None:intergenic 25.0%
!! TATTCTTTGGAAAACATACT+GGG - chr7_4:60205005-60205024 Msa1167710:intron 25.0%
! AGTCGATGTTTATTTATTGT+CGG - chr7_4:60205031-60205050 Msa1167710:intron 25.0%
ATAGGGAAAACTAAAAAGAG+AGG + chr7_4:60200135-60200154 None:intergenic 30.0%
TGAACGTAAAATTCTTTAGC+AGG + chr7_4:60200609-60200628 None:intergenic 30.0%
! TTTTACGTTCAGATTGATAC+TGG - chr7_4:60200618-60200637 Msa1167710:CDS 30.0%
CCATAAAAGATGGTTAAAAG+GGG - chr7_4:60200911-60200930 Msa1167710:intron 30.0%
!!! TATGTATTTTGACGTGATCA+TGG - chr7_4:60201194-60201213 Msa1167710:CDS 30.0%
!!! ATGTATTTTGACGTGATCAT+GGG - chr7_4:60201195-60201214 Msa1167710:CDS 30.0%
AATCCTCATGATGTTATTGA+TGG - chr7_4:60201270-60201289 Msa1167710:intron 30.0%
ATACCATCAATAACATCATG+AGG + chr7_4:60201276-60201295 None:intergenic 30.0%
! GATGTTATTGATGGTATGAT+AGG - chr7_4:60201279-60201298 Msa1167710:intron 30.0%
GAAAAGAGAACATACTGTAA+TGG + chr7_4:60201732-60201751 None:intergenic 30.0%
ATAGGAGAAGAAAACATTGA+AGG + chr7_4:60201762-60201781 None:intergenic 30.0%
! AATGTTTTCTTCTCCTATCT+CGG - chr7_4:60201764-60201783 Msa1167710:intron 30.0%
! AAAATTTGTTCAACCGAGAT+AGG + chr7_4:60201780-60201799 None:intergenic 30.0%
!! AATCACTCTGAAATTTATCC+AGG - chr7_4:60201883-60201902 Msa1167710:intron 30.0%
!! ATCACTCTGAAATTTATCCA+GGG - chr7_4:60201884-60201903 Msa1167710:intron 30.0%
AGAAACATTACGTAAGCTAA+GGG + chr7_4:60202028-60202047 None:intergenic 30.0%
TAGAAACATTACGTAAGCTA+AGG + chr7_4:60202029-60202048 None:intergenic 30.0%
AGTTAGTACAATGAAATGGA+AGG + chr7_4:60202136-60202155 None:intergenic 30.0%
! AAAATTTTGTTCTTGGCAAG+AGG + chr7_4:60202222-60202241 None:intergenic 30.0%
GATTCACATTCATTTACCAA+GGG + chr7_4:60202338-60202357 None:intergenic 30.0%
CTTAGCAAAATGAAAATGCA+TGG - chr7_4:60202437-60202456 Msa1167710:intron 30.0%
ACTGCAAGTTATTTGACAAT+GGG + chr7_4:60202631-60202650 None:intergenic 30.0%
AACTGCAAGTTATTTGACAA+TGG + chr7_4:60202632-60202651 None:intergenic 30.0%
CAAATACATCTTGATCGATT+GGG + chr7_4:60202765-60202784 None:intergenic 30.0%
GTGTTTCAAAAGTTTAAGAG+AGG + chr7_4:60202892-60202911 None:intergenic 30.0%
CTAGAACATGTTTAATACTG+AGG + chr7_4:60203104-60203123 None:intergenic 30.0%
TAATTGCTTACCTCACAAAT+TGG - chr7_4:60203237-60203256 Msa1167710:intron 30.0%
AATTGCTTACCTCACAAATT+GGG - chr7_4:60203238-60203257 Msa1167710:intron 30.0%
!!! ACTTTGTTTTGTGAAAACAG+GGG - chr7_4:60203283-60203302 Msa1167710:intron 30.0%
AACCATCAATTTAGACAGTA+AGG - chr7_4:60203366-60203385 Msa1167710:intron 30.0%
TCTGTAATAAAGTTCACTCA+TGG + chr7_4:60203463-60203482 None:intergenic 30.0%
CAAGATTCAATGCTATCATT+TGG + chr7_4:60203572-60203591 None:intergenic 30.0%
!!! ATCTAGAACTTTTTTTGACG+GGG + chr7_4:60203698-60203717 None:intergenic 30.0%
!!! CATCTAGAACTTTTTTTGAC+GGG + chr7_4:60203699-60203718 None:intergenic 30.0%
CTAGATGTTACATTATGCAT+TGG - chr7_4:60203712-60203731 Msa1167710:intron 30.0%
!! CACTGATTTACATATCTCAA+CGG - chr7_4:60203872-60203891 Msa1167710:CDS 30.0%
! TGGTTTCCTTTGGAAATAAT+GGG + chr7_4:60203936-60203955 None:intergenic 30.0%
AGAATTGAAATAACCTGGTT+GGG + chr7_4:60203971-60203990 None:intergenic 30.0%
TGACATCTCAGAAATCATAA+TGG + chr7_4:60204029-60204048 None:intergenic 30.0%
!! ATGATTTCTGAGATGTCATT+TGG - chr7_4:60204031-60204050 Msa1167710:intron 30.0%
TCTTATACATTATGGTTTCC+TGG - chr7_4:60204145-60204164 Msa1167710:intron 30.0%
! ATTTTTCTTCTTGCCTAAGT+AGG - chr7_4:60204196-60204215 Msa1167710:intron 30.0%
TCTCTCGTTTGATTATGATA+CGG - chr7_4:60204410-60204429 Msa1167710:CDS 30.0%
AGACATATCCACTATTCAAT+AGG + chr7_4:60204533-60204552 None:intergenic 30.0%
! AGATCATTACTCTTGTTATC+CGG - chr7_4:60204585-60204604 Msa1167710:intron 30.0%
! AAGGAGCATATATGCAATAA+AGG + chr7_4:60204749-60204768 None:intergenic 30.0%
! CTATTCTTTGGAAAACATAC+TGG - chr7_4:60205004-60205023 Msa1167710:intron 30.0%
! ATTCTTTGGAAAACATACTG+GGG - chr7_4:60205006-60205025 Msa1167710:intron 30.0%
ATACCCTTCATAATTAGGAA+CGG - chr7_4:60205055-60205074 Msa1167710:intron 30.0%
! ATCTTTTCCCAATTAGTATG+TGG - chr7_4:60205121-60205140 Msa1167710:CDS 30.0%
!! TGATATACTTCTGAAGTTGA+TGG - chr7_4:60205202-60205221 Msa1167710:CDS 30.0%
AGTTACAACACAACATTGAT+TGG + chr7_4:60205273-60205292 None:intergenic 30.0%
GTTATATGTATACTTGCTCT+TGG - chr7_4:60205339-60205358 Msa1167710:five_prime_UTR 30.0%
AGCAACGGTAATGTAATAGA+TGG + chr7_4:60200204-60200223 None:intergenic 35.0%
AAATATGTGCGTTCCTTTGT+TGG - chr7_4:60200235-60200254 Msa1167710:three_prime_UTR 35.0%
ATACCCAACTAAGTAAGGAT+CGG + chr7_4:60200462-60200481 None:intergenic 35.0%
GCATGAAGATTGAGAAAGAA+TGG + chr7_4:60200486-60200505 None:intergenic 35.0%
CTCAATCTTCATGCATTCTT+TGG - chr7_4:60200492-60200511 Msa1167710:three_prime_UTR 35.0%
! CCCCTTTTAACCATCTTTTA+TGG + chr7_4:60200914-60200933 None:intergenic 35.0%
!! TCTTCATCTACCGTTGTTTT+TGG - chr7_4:60201237-60201256 Msa1167710:CDS 35.0%
!!! CTTCATCTACCGTTGTTTTT+GGG - chr7_4:60201238-60201257 Msa1167710:CDS 35.0%
CAATAACATCATGAGGATTG+AGG + chr7_4:60201269-60201288 None:intergenic 35.0%
TCTTATTGGGATGATTGTTC+TGG - chr7_4:60201479-60201498 Msa1167710:intron 35.0%
!! GGATGATTGTTCTGGAAAAT+AGG - chr7_4:60201487-60201506 Msa1167710:intron 35.0%
!!! AAGGCAGTTGATGGAATTTT+TGG - chr7_4:60201549-60201568 Msa1167710:intron 35.0%
!!! AGGCAGTTGATGGAATTTTT+GGG - chr7_4:60201550-60201569 Msa1167710:intron 35.0%
!!! GTTGATGGAATTTTTGGGTT+TGG - chr7_4:60201555-60201574 Msa1167710:intron 35.0%
ATATCACAAGTGTCATCACA+AGG - chr7_4:60201597-60201616 Msa1167710:CDS 35.0%
AAGCAATGAGAGAACACTTT+GGG + chr7_4:60201630-60201649 None:intergenic 35.0%
TAAGCAATGAGAGAACACTT+TGG + chr7_4:60201631-60201650 None:intergenic 35.0%
AGTGTTCTCTCATTGCTTAA+AGG - chr7_4:60201632-60201651 Msa1167710:intron 35.0%
GTGTTCTCTCATTGCTTAAA+GGG - chr7_4:60201633-60201652 Msa1167710:intron 35.0%
!! ACTGGTTCTTGGTGAAATTT+TGG - chr7_4:60201677-60201696 Msa1167710:intron 35.0%
!! GAAACATAAAGCACTGTTAG+TGG - chr7_4:60201958-60201977 Msa1167710:intron 35.0%
TGGTACTGTAAATCGATGTT+TGG - chr7_4:60202057-60202076 Msa1167710:intron 35.0%
TGTTGCAAAAGTAATAGGTC+TGG - chr7_4:60202173-60202192 Msa1167710:intron 35.0%
GTTGCAAAAGTAATAGGTCT+GGG - chr7_4:60202174-60202193 Msa1167710:intron 35.0%
GTCTGGGTATTTGTATGTTT+GGG - chr7_4:60202190-60202209 Msa1167710:intron 35.0%
AAGAAACCAACATCTGTGTT+AGG + chr7_4:60202296-60202315 None:intergenic 35.0%
GGATTCACATTCATTTACCA+AGG + chr7_4:60202339-60202358 None:intergenic 35.0%
TGGTAAATGAATGTGAATCC+TGG - chr7_4:60202339-60202358 Msa1167710:intron 35.0%
GCAAATACATCTTGATCGAT+TGG + chr7_4:60202766-60202785 None:intergenic 35.0%
GATCAAGATGTATTTGCAAC+AGG - chr7_4:60202769-60202788 Msa1167710:CDS 35.0%
! CGAGGAACTATAATTGATTC+CGG - chr7_4:60202799-60202818 Msa1167710:CDS 35.0%
! AATTGATTCCGGTACTACAT+TGG - chr7_4:60202810-60202829 Msa1167710:intron 35.0%
GATCATAAGCTTCTTGAACA+AGG + chr7_4:60202840-60202859 None:intergenic 35.0%
! GAACTTACAGCATTGAGAAA+AGG + chr7_4:60202862-60202881 None:intergenic 35.0%
! CTGTAATGACTTGGAGTAAT+AGG - chr7_4:60203028-60203047 Msa1167710:intron 35.0%
ATTGCTTACCTCACAAATTG+GGG - chr7_4:60203239-60203258 Msa1167710:intron 35.0%
AAAATACTCCCCAATTTGTG+AGG + chr7_4:60203250-60203269 None:intergenic 35.0%
AGTTGAAGTGTGTGAAAAAG+TGG + chr7_4:60203317-60203336 None:intergenic 35.0%
CTCCTTACTGTCTAAATTGA+TGG + chr7_4:60203371-60203390 None:intergenic 35.0%
GTAGCAGAAACATTAGAAAG+GGG + chr7_4:60203524-60203543 None:intergenic 35.0%
GGTAGCAGAAACATTAGAAA+GGG + chr7_4:60203525-60203544 None:intergenic 35.0%
TGGTAGCAGAAACATTAGAA+AGG + chr7_4:60203526-60203545 None:intergenic 35.0%
! TTTCTAATGTTTCTGCTACC+AGG - chr7_4:60203525-60203544 Msa1167710:intron 35.0%
ATGCTATCATTTGGACTCTT+GGG + chr7_4:60203563-60203582 None:intergenic 35.0%
AATGCTATCATTTGGACTCT+TGG + chr7_4:60203564-60203583 None:intergenic 35.0%
AGATATGTAAATCAGTGCAC+GGG + chr7_4:60203869-60203888 None:intergenic 35.0%
GAGATATGTAAATCAGTGCA+CGG + chr7_4:60203870-60203889 None:intergenic 35.0%
TTTGGAAAATTGTGACACAG+TGG + chr7_4:60203913-60203932 None:intergenic 35.0%
TCCAAACCCATTATTTCCAA+AGG - chr7_4:60203927-60203946 Msa1167710:CDS 35.0%
!! TCCTTTGGAAATAATGGGTT+TGG + chr7_4:60203931-60203950 None:intergenic 35.0%
! CTGGTTTCCTTTGGAAATAA+TGG + chr7_4:60203937-60203956 None:intergenic 35.0%
GAGAATTGAAATAACCTGGT+TGG + chr7_4:60203972-60203991 None:intergenic 35.0%
GTCAGAGAATTGAAATAACC+TGG + chr7_4:60203976-60203995 None:intergenic 35.0%
GTCAGTTTAAATTTCATGGG+TGG - chr7_4:60204092-60204111 Msa1167710:intron 35.0%
!!! CTGTTCTGGTTTTAAAACCA+TGG + chr7_4:60204123-60204142 None:intergenic 35.0%
AAGAGAAAGACATAGTTACC+AGG + chr7_4:60204166-60204185 None:intergenic 35.0%
ATGCATCAGACAATTATCAG+TGG + chr7_4:60204244-60204263 None:intergenic 35.0%
! CAGAAGGGATACACAATTTT+AGG - chr7_4:60204319-60204338 Msa1167710:CDS 35.0%
! AAGGGATACACAATTTTAGG+AGG - chr7_4:60204322-60204341 Msa1167710:CDS 35.0%
!! AATTTTAGGAGGTTAGAAGC+TGG - chr7_4:60204333-60204352 Msa1167710:CDS 35.0%
CTCTCGTTTGATTATGATAC+GGG - chr7_4:60204411-60204430 Msa1167710:CDS 35.0%
TATTCAATAGGCCCACAAAT+GGG + chr7_4:60204521-60204540 None:intergenic 35.0%
GACTTAGCTAATCAACGAAT+TGG - chr7_4:60204688-60204707 Msa1167710:intron 35.0%
TAGCTAATCAACGAATTGGA+TGG - chr7_4:60204692-60204711 Msa1167710:intron 35.0%
GGTTAACTCACAATCATAGT+CGG + chr7_4:60204719-60204738 None:intergenic 35.0%
AATCCTTACAAGTTGCAACT+TGG + chr7_4:60204912-60204931 None:intergenic 35.0%
AAGAGTCGAAAGCTATTCTT+TGG - chr7_4:60204992-60205011 Msa1167710:intron 35.0%
TACCCTTCATAATTAGGAAC+GGG - chr7_4:60205056-60205075 Msa1167710:intron 35.0%
GCAGTTTCCACATACTAATT+GGG + chr7_4:60205131-60205150 None:intergenic 35.0%
CAATTAGTATGTGGAAACTG+CGG - chr7_4:60205130-60205149 Msa1167710:CDS 35.0%
GTTTATAGTCTGACATCAGA+TGG + chr7_4:60205366-60205385 None:intergenic 35.0%
TCAAGAGAAAGATAACTCCC+CGG + chr7_4:60200311-60200330 None:intergenic 40.0%
! GTTCAACTTGGTGGTTAAGA+GGG + chr7_4:60200343-60200362 None:intergenic 40.0%
! AGTTCAACTTGGTGGTTAAG+AGG + chr7_4:60200344-60200363 None:intergenic 40.0%
ATTCTTGACTTCTCAGTCCA+AGG - chr7_4:60200431-60200450 Msa1167710:three_prime_UTR 40.0%
ATGGCATACCCAACTAAGTA+AGG + chr7_4:60200467-60200486 None:intergenic 40.0%
AATACTTGCCCCAAATCTAG+TGG - chr7_4:60200666-60200685 Msa1167710:CDS 40.0%
ACCCCTAAACCACTAGATTT+GGG + chr7_4:60200678-60200697 None:intergenic 40.0%
CGCTCTGCAGTAAATAGTAA+GGG + chr7_4:60200766-60200785 None:intergenic 40.0%
TCGCTCTGCAGTAAATAGTA+AGG + chr7_4:60200767-60200786 None:intergenic 40.0%
GTGTTCTTATGCGGTTCAAA+CGG - chr7_4:60201077-60201096 Msa1167710:intron 40.0%
! TGCAGCTACACTTTTCAGTA+TGG - chr7_4:60201132-60201151 Msa1167710:intron 40.0%
! GCAGCTACACTTTTCAGTAT+GGG - chr7_4:60201133-60201152 Msa1167710:intron 40.0%
! CAGCTACACTTTTCAGTATG+GGG - chr7_4:60201134-60201153 Msa1167710:intron 40.0%
! TACACTTTTCAGTATGGGGA+TGG - chr7_4:60201138-60201157 Msa1167710:intron 40.0%
! GATATAACAGACAAAGCACC+AGG + chr7_4:60201582-60201601 None:intergenic 40.0%
TCTCATTGCTTAAAGGGACA+GGG - chr7_4:60201639-60201658 Msa1167710:intron 40.0%
! ACATACTGTAATGGGACAAG+TGG + chr7_4:60201723-60201742 None:intergenic 40.0%
AAGGATGCAAATACTTTCCC+TGG + chr7_4:60201904-60201923 None:intergenic 40.0%
! AAGCTAAGGGTACAAAATGG+TGG + chr7_4:60202015-60202034 None:intergenic 40.0%
! CGTAAGCTAAGGGTACAAAA+TGG + chr7_4:60202018-60202037 None:intergenic 40.0%
GGTCTGGGTATTTGTATGTT+TGG - chr7_4:60202189-60202208 Msa1167710:intron 40.0%
!! AAGGGTATCAGAGAAGAACA+TGG + chr7_4:60202320-60202339 None:intergenic 40.0%
ATGTTCTTCTCTGATACCCT+TGG - chr7_4:60202319-60202338 Msa1167710:intron 40.0%
GCAAATGCTTTACTACTTCC+AGG + chr7_4:60202360-60202379 None:intergenic 40.0%
ACAATGCATTGTTAAGGCCA+GGG + chr7_4:60202414-60202433 None:intergenic 40.0%
AACAATGCATTGTTAAGGCC+AGG + chr7_4:60202415-60202434 None:intergenic 40.0%
GTCTTATCAGACATAATGCC+TGG - chr7_4:60202671-60202690 Msa1167710:CDS 40.0%
TTTGCAACAGGTAACAATCG+AGG - chr7_4:60202781-60202800 Msa1167710:CDS 40.0%
AAGGTATGCCAATGTAGTAC+CGG + chr7_4:60202821-60202840 None:intergenic 40.0%
! GCTTTTCTGTCTCAATCAGA+AGG - chr7_4:60203055-60203074 Msa1167710:intron 40.0%
ATATGTCCAATCCGCAAAGA+CGG - chr7_4:60203130-60203149 Msa1167710:intron 40.0%
TAGACCTTAAACCGTCTTTG+CGG + chr7_4:60203144-60203163 None:intergenic 40.0%
AAGTGTGTGAAAAAGTGGCA+AGG + chr7_4:60203312-60203331 None:intergenic 40.0%
!! AAAGGGGTCCACTATTTTTC+AGG + chr7_4:60203508-60203527 None:intergenic 40.0%
CTGCAACGTAAATCAATGTC+TGG - chr7_4:60203666-60203685 Msa1167710:intron 40.0%
CTATAGGGTGTGTTTAACAG+AGG - chr7_4:60203786-60203805 Msa1167710:intron 40.0%
!! CAGATAACACTGGTTTCCTT+TGG + chr7_4:60203946-60203965 None:intergenic 40.0%
CAAAGGAAACCAGTGTTATC+TGG - chr7_4:60203944-60203963 Msa1167710:CDS 40.0%
! GATTTTTGCTCATTCAGCCT+AGG - chr7_4:60204053-60204072 Msa1167710:intron 40.0%
CTAGAGGGAATATATCACCT+AGG + chr7_4:60204073-60204092 None:intergenic 40.0%
! TGGTTTCCAAAAAGTGCAGA+AGG - chr7_4:60204303-60204322 Msa1167710:CDS 40.0%
! GGTTTCCAAAAAGTGCAGAA+GGG - chr7_4:60204304-60204323 Msa1167710:CDS 40.0%
! TGTATCCCTTCTGCACTTTT+TGG + chr7_4:60204312-60204331 None:intergenic 40.0%
AGCACCATGTTGCTCTTAAA+GGG + chr7_4:60204451-60204470 None:intergenic 40.0%
TAGCACCATGTTGCTCTTAA+AGG + chr7_4:60204452-60204471 None:intergenic 40.0%
!! AACATGGTGCTATACAGTTC+CGG - chr7_4:60204460-60204479 Msa1167710:CDS 40.0%
CTATTCAATAGGCCCACAAA+TGG + chr7_4:60204522-60204541 None:intergenic 40.0%
TTTGTGGGCCTATTGAATAG+TGG - chr7_4:60204522-60204541 Msa1167710:intron 40.0%
CACAGAGACATTTACAGCTA+AGG + chr7_4:60204813-60204832 None:intergenic 40.0%
CTTAGCTGTAAATGTCTCTG+TGG - chr7_4:60204811-60204830 Msa1167710:intron 40.0%
TCTCCAAGTTGCAACTTGTA+AGG - chr7_4:60204906-60204925 Msa1167710:CDS 40.0%
GTTGCAACTTGTAAGGATTG+TGG - chr7_4:60204913-60204932 Msa1167710:CDS 40.0%
TCGGCATACCCTTCATAATT+AGG - chr7_4:60205050-60205069 Msa1167710:intron 40.0%
CTCCCGTTCCTAATTATGAA+GGG + chr7_4:60205061-60205080 None:intergenic 40.0%
ACTCCCGTTCCTAATTATGA+AGG + chr7_4:60205062-60205081 None:intergenic 40.0%
CGCAGTTTCCACATACTAAT+TGG + chr7_4:60205132-60205151 None:intergenic 40.0%
! CACAACATTGATTGGTAGAG+TGG + chr7_4:60205265-60205284 None:intergenic 40.0%
GTGTTGTAACTGTAACTCAG+TGG - chr7_4:60205282-60205301 Msa1167710:exon 40.0%
TATGTGCGTTCCTTTGTTGG+TGG - chr7_4:60200238-60200257 Msa1167710:three_prime_UTR 45.0%
! AACTTGGTGGTTAAGAGGGA+TGG + chr7_4:60200339-60200358 None:intergenic 45.0%
TGAGAGTGGTGAGTTCAACT+TGG + chr7_4:60200355-60200374 None:intergenic 45.0%
ACCTCCGATCCTTACTTAGT+TGG - chr7_4:60200455-60200474 Msa1167710:three_prime_UTR 45.0%
CCTCCGATCCTTACTTAGTT+GGG - chr7_4:60200456-60200475 Msa1167710:three_prime_UTR 45.0%
TGCCCCAAATCTAGTGGTTT+AGG - chr7_4:60200672-60200691 Msa1167710:CDS 45.0%
GCCCCAAATCTAGTGGTTTA+GGG - chr7_4:60200673-60200692 Msa1167710:CDS 45.0%
CCCCTAAACCACTAGATTTG+GGG + chr7_4:60200677-60200696 None:intergenic 45.0%
CCCCAAATCTAGTGGTTTAG+GGG - chr7_4:60200674-60200693 Msa1167710:CDS 45.0%
CACCCCTAAACCACTAGATT+TGG + chr7_4:60200679-60200698 None:intergenic 45.0%
TGATCCGGTGTGTTCTTATG+CGG - chr7_4:60201068-60201087 Msa1167710:intron 45.0%
TGAACCGCATAAGAACACAC+CGG + chr7_4:60201075-60201094 None:intergenic 45.0%
TACAAGTCAGTGCTCTTCTC+AGG - chr7_4:60201101-60201120 Msa1167710:intron 45.0%
TTTCAGTATGGGGATGGAAG+TGG - chr7_4:60201144-60201163 Msa1167710:intron 45.0%
TTCAGTATGGGGATGGAAGT+GGG - chr7_4:60201145-60201164 Msa1167710:intron 45.0%
GAGGACTCACCCAAAAACAA+CGG + chr7_4:60201250-60201269 None:intergenic 45.0%
AGTGTGCTCAATGTAGGGTT+GGG - chr7_4:60201305-60201324 Msa1167710:intron 45.0%
!!! GGAATTTTTGGGTTTGGTCC+TGG - chr7_4:60201561-60201580 Msa1167710:CDS 45.0%
ACAAGTGTCATCACAAGGCA+TGG - chr7_4:60201602-60201621 Msa1167710:CDS 45.0%
CTCTCATTGCTTAAAGGGAC+AGG - chr7_4:60201638-60201657 Msa1167710:intron 45.0%
CAACATCTGTGTTAGGAGAG+GGG + chr7_4:60202289-60202308 None:intergenic 45.0%
CCAACATCTGTGTTAGGAGA+GGG + chr7_4:60202290-60202309 None:intergenic 45.0%
ACCAACATCTGTGTTAGGAG+AGG + chr7_4:60202291-60202310 None:intergenic 45.0%
! TTTGGGTGTTTTTCATGCCC+TGG - chr7_4:60202394-60202413 Msa1167710:intron 45.0%
CCTGAAATTCGATCAACACC+AGG + chr7_4:60202692-60202711 None:intergenic 45.0%
!! CCTGGTGTTGATCGAATTTC+AGG - chr7_4:60202689-60202708 Msa1167710:CDS 45.0%
!! CTTCAAAGCATTGCGGTCAA+TGG - chr7_4:60202730-60202749 Msa1167710:CDS 45.0%
CTTAAACCGTCTTTGCGGAT+TGG + chr7_4:60203139-60203158 None:intergenic 45.0%
CAATCCGCAAAGACGGTTTA+AGG - chr7_4:60203137-60203156 Msa1167710:intron 45.0%
ATCGTGACTCATGAGTACCT+TGG + chr7_4:60203214-60203233 None:intergenic 45.0%
AACACACTGCCATTGCAGTA+AGG - chr7_4:60203429-60203448 Msa1167710:intron 45.0%
GAATCTTGAGACTAGACACC+TGG - chr7_4:60203584-60203603 Msa1167710:intron 45.0%
TGTAAATCAGTGCACGGGAA+AGG + chr7_4:60203864-60203883 None:intergenic 45.0%
CACGAGAACTACTCCTACTT+AGG + chr7_4:60204212-60204231 None:intergenic 45.0%
!! TATAGGATGGTGCTGCAATG+TGG - chr7_4:60204275-60204294 Msa1167710:intron 45.0%
! TTCCCCCTTTAAGAGCAACA+TGG - chr7_4:60204444-60204463 Msa1167710:CDS 45.0%
CACCATGTTGCTCTTAAAGG+GGG + chr7_4:60204449-60204468 None:intergenic 45.0%
GCACCATGTTGCTCTTAAAG+GGG + chr7_4:60204450-60204469 None:intergenic 45.0%
GAAGGATCAGACCCATTTGT+GGG - chr7_4:60204507-60204526 Msa1167710:CDS 45.0%
ACTGCGGATCTCACTGTAAA+AGG - chr7_4:60205146-60205165 Msa1167710:CDS 45.0%
CTGCGGATCTCACTGTAAAA+GGG - chr7_4:60205147-60205166 Msa1167710:CDS 45.0%
AGGGCTCTGTTGTTGAGAAA+TGG - chr7_4:60205166-60205185 Msa1167710:CDS 45.0%
!! TTATATTTAATATTATTAGT+TGG + chr7_4:60203342-60203361 None:intergenic 5.0%
!! CGTTCCTTTGTTGGTGGCTT+TGG - chr7_4:60200244-60200263 Msa1167710:three_prime_UTR 50.0%
GAGTGGTGAGTTCAACTTGG+TGG + chr7_4:60200352-60200371 None:intergenic 50.0%
!! TATGTCGCGAGCTTTGAGAG+TGG + chr7_4:60200369-60200388 None:intergenic 50.0%
AGTAAGGATCGGAGGTTCCT+TGG + chr7_4:60200451-60200470 None:intergenic 50.0%
CCCAACTAAGTAAGGATCGG+AGG + chr7_4:60200459-60200478 None:intergenic 50.0%
! AGGGAGAGTGTGCTCAATGT+AGG - chr7_4:60201299-60201318 Msa1167710:intron 50.0%
! GGGAGAGTGTGCTCAATGTA+GGG - chr7_4:60201300-60201319 Msa1167710:intron 50.0%
GAGTGTGCTCAATGTAGGGT+TGG - chr7_4:60201304-60201323 Msa1167710:intron 50.0%
AGGTGTAGCACCTATCAGTC+TGG - chr7_4:60201507-60201526 Msa1167710:intron 50.0%
GGTGTAGCACCTATCAGTCT+GGG - chr7_4:60201508-60201527 Msa1167710:intron 50.0%
GTGTAGCACCTATCAGTCTG+GGG - chr7_4:60201509-60201528 Msa1167710:intron 50.0%
CACCTATCAGTCTGGGGATT+TGG - chr7_4:60201515-60201534 Msa1167710:intron 50.0%
AGCCAAATCCCCAGACTGAT+AGG + chr7_4:60201520-60201539 None:intergenic 50.0%
ATCAGTCTGGGGATTTGGCT+CGG - chr7_4:60201520-60201539 Msa1167710:intron 50.0%
!! GGATTTGGCTCGGACAGAAA+AGG - chr7_4:60201530-60201549 Msa1167710:intron 50.0%
CGGACAGAAAAGGCAGTTGA+TGG - chr7_4:60201540-60201559 Msa1167710:intron 50.0%
CCCTCTCCTAACACAGATGT+TGG - chr7_4:60202287-60202306 Msa1167710:intron 50.0%
GAGACACAGCCTTACTGCAA+TGG + chr7_4:60203441-60203460 None:intergenic 50.0%
TTGGACTCTTGGGTAGATGC+TGG + chr7_4:60203553-60203572 None:intergenic 50.0%
TGGTTGGGACCAGATAACAC+TGG + chr7_4:60203956-60203975 None:intergenic 50.0%
AGTGTTATCTGGTCCCAACC+AGG - chr7_4:60203955-60203974 Msa1167710:CDS 50.0%
! TTTCATGGGTGGAGCATCCA+TGG - chr7_4:60204103-60204122 Msa1167710:intron 50.0%
!! ATGGTGCTATACAGTTCCGG+TGG - chr7_4:60204463-60204482 Msa1167710:CDS 50.0%
GGAAGGATCAGACCCATTTG+TGG - chr7_4:60204506-60204525 Msa1167710:CDS 50.0%
! TAAATTGGTGCTCGCTGCTC+AGG - chr7_4:60204785-60204804 Msa1167710:intron 50.0%
TGTGGCTACGAGCAAGAGTA+AGG - chr7_4:60204829-60204848 Msa1167710:intron 50.0%
AAGGATGCATACCTCAGTGC+AGG - chr7_4:60204848-60204867 Msa1167710:CDS 50.0%
!! TTGGTAGAGTGGAAGTGCTC+TGG + chr7_4:60205254-60205273 None:intergenic 50.0%
GGCGCTCGAATCTTGCAAGA+CGG - chr7_4:60200398-60200417 Msa1167710:three_prime_UTR 55.0%
GCTCGAATCTTGCAAGACGG+CGG - chr7_4:60200401-60200420 Msa1167710:three_prime_UTR 55.0%
! GCTGGTTTCCTGCTCTGATC+CGG - chr7_4:60201053-60201072 Msa1167710:intron 55.0%
AGAACACACCGGATCAGAGC+AGG + chr7_4:60201064-60201083 None:intergenic 55.0%
TGCTTAAAGGGACAGGGCAG+TGG - chr7_4:60201645-60201664 Msa1167710:intron 55.0%
TTAAAGGGACAGGGCAGTGG+AGG - chr7_4:60201648-60201667 Msa1167710:intron 55.0%
!! GGAGGAGGCATACTGGTTCT+TGG - chr7_4:60201666-60201685 Msa1167710:intron 55.0%
CTTGGGTAGATGCTGGATCC+TGG + chr7_4:60203546-60203565 None:intergenic 55.0%
! GGTGCTGCAATGTGGTGCAT+TGG - chr7_4:60204283-60204302 Msa1167710:CDS 55.0%
CACTCATCTGTCCTGCACTG+AGG + chr7_4:60204862-60204881 None:intergenic 55.0%
GGAGAGAACGCTGATGTGTG+AGG + chr7_4:60204891-60204910 None:intergenic 55.0%
GCGGCCAAAGCCACCAACAA+AGG + chr7_4:60200251-60200270 None:intergenic 60.0%
!! GTTGGTGGCTTTGGCCGCAA+TGG - chr7_4:60200253-60200272 Msa1167710:three_prime_UTR 60.0%
TTTGGCCGCAATGGCGGTGA+CGG - chr7_4:60200262-60200281 Msa1167710:three_prime_UTR 60.0%
CGTAACCGTCACCGCCATTG+CGG + chr7_4:60200270-60200289 None:intergenic 60.0%
! CGCAATGGCGGTGACGGTTA+CGG - chr7_4:60200268-60200287 Msa1167710:three_prime_UTR 60.0%
GTGACGGTTACGGCCGTATG+CGG - chr7_4:60200278-60200297 Msa1167710:three_prime_UTR 60.0%
GCTCGCGACATAGCTCGTCA+CGG - chr7_4:60200377-60200396 Msa1167710:three_prime_UTR 60.0%
ATCTTGCAAGACGGCGGTGC+TGG - chr7_4:60200407-60200426 Msa1167710:three_prime_UTR 60.0%
CGCAGCAGTGGATGAACTCG+CGG + chr7_4:60201034-60201053 None:intergenic 60.0%
GAGTTCATCCACTGCTGCGC+TGG - chr7_4:60201035-60201054 Msa1167710:intron 60.0%
CTGTGTTAGGAGAGGGGAGC+TGG + chr7_4:60202283-60202302 None:intergenic 60.0%
!! GGTGGCTTTGGCCGCAATGG+CGG - chr7_4:60200256-60200275 Msa1167710:three_prime_UTR 65.0%
ACGGTTACGGCCGTATGCGG+CGG - chr7_4:60200281-60200300 Msa1167710:three_prime_UTR 65.0%
! GGCCGTATGCGGCGGTTTTC+CGG - chr7_4:60200289-60200308 Msa1167710:three_prime_UTR 65.0%
! GCCGTATGCGGCGGTTTTCC+GGG - chr7_4:60200290-60200309 Msa1167710:three_prime_UTR 65.0%
CCCCGGAAAACCGCCGCATA+CGG + chr7_4:60200294-60200313 None:intergenic 65.0%
! CCGTATGCGGCGGTTTTCCG+GGG - chr7_4:60200291-60200310 Msa1167710:three_prime_UTR 65.0%
GCAGGAAACCAGCGCAGCAG+TGG + chr7_4:60201046-60201065 None:intergenic 65.0%
GGGGATGGAAGTGGGACGTC+TGG - chr7_4:60201153-60201172 Msa1167710:intron 65.0%
AAGGGACAGGGCAGTGGAGG+AGG - chr7_4:60201651-60201670 Msa1167710:intron 65.0%
! GGGCAGTGGAGGAGGCATAC+TGG - chr7_4:60201659-60201678 Msa1167710:intron 65.0%
AGTTCCGGTGGTCCACCGCA+GGG - chr7_4:60204475-60204494 Msa1167710:CDS 65.0%
TCCTTCCCTAGACCCCCCTG+CGG + chr7_4:60204493-60204512 None:intergenic 65.0%
CAGTTCCGGTGGTCCACCGC+AGG - chr7_4:60204474-60204493 Msa1167710:CDS 70.0%
GTTCCGGTGGTCCACCGCAG+GGG - chr7_4:60204476-60204495 Msa1167710:CDS 70.0%
TTCCGGTGGTCCACCGCAGG+GGG - chr7_4:60204477-60204496 Msa1167710:CDS 70.0%
GTCCACCGCAGGGGGGTCTA+GGG - chr7_4:60204485-60204504 Msa1167710:CDS 70.0%
TTCCCTAGACCCCCCTGCGG+TGG + chr7_4:60204490-60204509 None:intergenic 70.0%
ACCGCAGGGGGGTCTAGGGA+AGG - chr7_4:60204489-60204508 Msa1167710:CDS 70.0%
TCCGGTGGTCCACCGCAGGG+GGG - chr7_4:60204478-60204497 Msa1167710:CDS 75.0%
ACCCCCCTGCGGTGGACCAC+CGG + chr7_4:60204482-60204501 None:intergenic 75.0%
GGTCCACCGCAGGGGGGTCT+AGG - chr7_4:60204484-60204503 Msa1167710:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60200118 60205419 60200118 ID=Msa1167710;Name=Msa1167710
chr7_4 mRNA 60200118 60205419 60200118 ID=Msa1167710-mRNA-1;Parent=Msa1167710;Name=Msa1167710-mRNA-1;_AED=0.15;_eAED=0.15;_QI=101|1|1|1|0.9|0.81|11|437|494
chr7_4 exon 60200118 60200730 60200118 ID=Msa1167710-mRNA-1:exon:18834;Parent=Msa1167710-mRNA-1
chr7_4 exon 60200810 60200881 60200810 ID=Msa1167710-mRNA-1:exon:18833;Parent=Msa1167710-mRNA-1
chr7_4 exon 60201194 60201257 60201194 ID=Msa1167710-mRNA-1:exon:18832;Parent=Msa1167710-mRNA-1
chr7_4 exon 60201371 60201467 60201371 ID=Msa1167710-mRNA-1:exon:18831;Parent=Msa1167710-mRNA-1
chr7_4 exon 60201561 60201634 60201561 ID=Msa1167710-mRNA-1:exon:18830;Parent=Msa1167710-mRNA-1
chr7_4 exon 60202664 60202826 60202664 ID=Msa1167710-mRNA-1:exon:18829;Parent=Msa1167710-mRNA-1
chr7_4 exon 60203801 60204028 60203801 ID=Msa1167710-mRNA-1:exon:18828;Parent=Msa1167710-mRNA-1
chr7_4 exon 60204278 60204528 60204278 ID=Msa1167710-mRNA-1:exon:18827;Parent=Msa1167710-mRNA-1
chr7_4 exon 60204842 60204962 60204842 ID=Msa1167710-mRNA-1:exon:18826;Parent=Msa1167710-mRNA-1
chr7_4 exon 60205060 60205373 60205060 ID=Msa1167710-mRNA-1:exon:18825;Parent=Msa1167710-mRNA-1
chr7_4 exon 60205394 60205419 60205394 ID=Msa1167710-mRNA-1:exon:18824;Parent=Msa1167710-mRNA-1
chr7_4 five_prime_UTR 60205394 60205419 60205394 ID=Msa1167710-mRNA-1:five_prime_utr;Parent=Msa1167710-mRNA-1
chr7_4 five_prime_UTR 60205299 60205373 60205299 ID=Msa1167710-mRNA-1:five_prime_utr;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60205060 60205298 60205060 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60204842 60204962 60204842 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60204278 60204528 60204278 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60203801 60204028 60203801 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60202664 60202826 60202664 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60201561 60201634 60201561 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60201371 60201467 60201371 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60201194 60201257 60201194 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60200810 60200881 60200810 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 CDS 60200555 60200730 60200555 ID=Msa1167710-mRNA-1:cds;Parent=Msa1167710-mRNA-1
chr7_4 three_prime_UTR 60200118 60200554 60200118 ID=Msa1167710-mRNA-1:three_prime_utr;Parent=Msa1167710-mRNA-1
Gene Sequence

>Msa1167710

ATGTGCGTTCCTTTGTTGGTGGCTTTGGCCGCAATGGCGGTGACGGTTACGGCCGTATGCGGCGGTTTTCCGGGGAGTTATCTTTCTCTTGAACGAACCATCCCTCTTAACCACCAAGTTGAACTCACCACTCTCAAAGCTCGCGACATAGCTCGTCACGGCGCTCGAATCTTGCAAGACGGCGGTGCTGGCATTCTTGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTAGTTGGGTTGTATTTTACTAAAGTGAAGATGGGTTCTCCTGCTAAAGAATTTTACGTTCAGATTGATACTGGAAGTGATATATTATGGCTTAATTGCAATACTTGCCCCAAATCTAGTGGTTTAGGGATTGATCTCAATTACTTTGACACCGCGAGTTCATCCACTGCTGCGCTGGTTTCCTGCTCTGATCCGGTGTGTTCTTATGCGGTTCAAACGGCTACAAGTCAGTGCTCTTCTCAGGCTAATCAGTGCAGCTACACTTTTCAGTATGGGGATGGAAGTGGGACGTCTGGATATTATGTTTATGATGCTATGTATTTTGACGTGATCATGGGTCAGTCTGTGTTTTCTAACTCTTCATCTACCGTTGTTTTTGGGTGTAGCACCTATCAGTCTGGGGATTTGGCTCGGACAGAAAAGGCAGTTGATGGAATTTTTGGGTTTGGTCCTGGTGCTTTGTCTGTTATATCACAAGTGTCATCACAAGGCATGGCACCCAAAGTGTTCTCTCATTGCTTAAAGGGACAGGGCAGTGGAGGAGGCATACTGGTTCTTGGTGAAATTTTGGAGCCAAATATTGTTTATACTCCACTTGTCCCATTACAGCCTCATTATAATTTAAATCTTCAAAGCATTGCGGTCAATGGACAAATTCTCCCAATCGATCAAGATGTATTTGCAACAGGTAACAATCGAGGAACTATAATTGATTCCGGTACTACATTGGCATACCTTGTTCAAGAAGCTTATGATCCTTTTCTCAATGCTATAACTACCACTGTGTCACAATTTTCCAAACCCATTATTTCCAAAGGAAACCAGTGTTATCTGGTCCCAACCAGCCTAGGTGATATATTCCCTCTAGTCAGTTTAAATTTCATGGGTGGAGCATCCATGGTTTTAAAACCAGAACAGTATCTTATACATTATGGTTTCCTGGATGGTGCTGCAATGTGGTGCATTGGTTTCCAAAAAGTGCAGAAGGGATACACAATTTTAGGAGATCTTGTCCTCAAAGATAAGATTTTTGTATACGACTTAGCTAATCAACGAATTGGATGGACCGACTATGATTGTTCCTTAGCTGTAAATGTCTCTGTGGCTACGAGCAAGAGTAAGGATGCATACCTCAGTGCAGGACAGATGAGTGTTAGCTCCTCACACATCAGCGTTCTCTCCAAGTTGCAACTTGTAAGGATTGTGGCTTTTCTTGTGCATATAATAGTTTTCATGGAGCCCCAGTTTTTGTAG
Protein sequence

>Msa1167710

MCVPLLVALAAMAVTVTAVCGGFPGSYLSLERTIPLNHQVELTTLKARDIARHGARILQDGGAGILDFSVQGTSDPYLVGLYFTKVKMGSPAKEFYVQIDTGSDILWLNCNTCPKSSGLGIDLNYFDTASSSTAALVSCSDPVCSYAVQTATSQCSSQANQCSYTFQYGDGSGTSGYYVYDAMYFDVIMGQSVFSNSSSTVVFGCSTYQSGDLARTEKAVDGIFGFGPGALSVISQVSSQGMAPKVFSHCLKGQGSGGGILVLGEILEPNIVYTPLVPLQPHYNLNLQSIAVNGQILPIDQDVFATGNNRGTIIDSGTTLAYLVQEAYDPFLNAITTTVSQFSKPIISKGNQCYLVPTSLGDIFPLVSLNFMGGASMVLKPEQYLIHYGFLDGAAMWCIGFQKVQKGYTILGDLVLKDKIFVYDLANQRIGWTDYDCSLAVNVSVATSKSKDAYLSAGQMSVSSSHISVLSKLQLVRIVAFLVHIIVFMEPQFL*