Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041980 | XP_003625731.3 | 98.765 | 648 | 7 | 1 | 1 | 647 | 1 | 648 | 0.0 | 1316 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041980 | sp|F4I2J8|CATIN_ARATH | 71.406 | 633 | 132 | 3 | 62 | 647 | 86 | 716 | 0.0 | 910 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041980 | A0A396H713 | 98.765 | 648 | 7 | 1 | 1 | 647 | 1 | 648 | 0.0 | 1316 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1041980 | Msa1167680 | 0.978881 | 9.190777e-147 | -8.615850e-47 |
Msa1041980 | Msa1167730 | 0.978442 | 7.812424e-146 | -8.615850e-47 |
Msa0322590 | Msa1041980 | 0.804289 | 2.319997e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041980 | MtrunA17_Chr7g0265361 | 98.765 | 648 | 7 | 1 | 1 | 647 | 1 | 648 | 0.0 | 1316 |
Msa1041980 | MtrunA17_Chr1g0179691 | 78.884 | 663 | 113 | 4 | 6 | 647 | 2 | 658 | 0.0 | 1025 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041980 | AT1G03910.1 | 76.740 | 589 | 132 | 2 | 62 | 647 | 86 | 672 | 0.0 | 931 |
Msa1041980 | AT1G03910.2 | 71.406 | 633 | 132 | 3 | 62 | 647 | 86 | 716 | 0.0 | 910 |
Msa1041980 | AT2G36815.2 | 51.546 | 97 | 33 | 2 | 269 | 364 | 17 | 100 | 5.60e-21 | 88.6 |
Msa1041980 | AT2G36815.1 | 52.128 | 94 | 31 | 2 | 272 | 364 | 26 | 106 | 3.24e-20 | 86.7 |
Find 191 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGGCTCCCATAGCTTTAA+AGG | 0.146220 | 7_1:-79660295 | None:intergenic |
TGACTTTGCTTTGATCAAAA+TGG | 0.168302 | 7_1:-79658297 | None:intergenic |
AGCTTCTTGATTCTCTCTAA+TGG | 0.217152 | 7_1:-79659996 | None:intergenic |
CACCAACCCATGTGGAATAT+TGG | 0.248519 | 7_1:+79658628 | Msa1041980:CDS |
TCGTATGGATAATAACAAAA+AGG | 0.249074 | 7_1:+79661598 | Msa1041980:three_prime_UTR |
TCAAATATAGGCTTGTTTAA+AGG | 0.267285 | 7_1:+79659698 | Msa1041980:intron |
ATTCTTATCGAGTATATTCT+AGG | 0.269159 | 7_1:-79661467 | None:intergenic |
TTGTACCCTTGCACAATCTT+TGG | 0.280919 | 7_1:-79660826 | None:intergenic |
TTTACCTTGAAGACCATATA+TGG | 0.284103 | 7_1:-79658418 | None:intergenic |
CTCTCCTTGTGGTGTGTGAT+TGG | 0.286802 | 7_1:+79659336 | Msa1041980:CDS |
GCTTCTTGATTCTCTCTAAT+GGG | 0.293100 | 7_1:-79659995 | None:intergenic |
TACAGAGTTGGAAGCCTTAC+AGG | 0.297377 | 7_1:+79659505 | Msa1041980:CDS |
AAATATTGGAGCAGGTTTAT+TGG | 0.299548 | 7_1:+79660695 | Msa1041980:intron |
TTCCTCTTCTGTGATTGTTC+TGG | 0.304361 | 7_1:-79655198 | None:intergenic |
CTTTCTCTATAGTGTAGTTC+GGG | 0.307351 | 7_1:-79660891 | None:intergenic |
TCTCAATGGCTCTGATGATT+TGG | 0.310949 | 7_1:+79658378 | Msa1041980:CDS |
GGTTTATCTTCATCCTCTAA+TGG | 0.311251 | 7_1:-79659768 | None:intergenic |
TAACAACATCGCCAAGGGTT+AGG | 0.311822 | 7_1:+79654995 | Msa1041980:five_prime_UTR |
AGAAATAAATGAACCATATA+TGG | 0.332368 | 7_1:+79658405 | Msa1041980:CDS |
ACGTGCTCGAGCTGAGTTCC+AGG | 0.339829 | 7_1:+79658166 | Msa1041980:CDS |
TCCAATGATTCTAATCCATT+TGG | 0.349636 | 7_1:+79655395 | Msa1041980:CDS |
TTGAAATACTTTGGCTTCCT+TGG | 0.351127 | 7_1:-79660736 | None:intergenic |
TGCACTAATTAACTAGTATA+TGG | 0.353671 | 7_1:-79661426 | None:intergenic |
ACCGCCGATAATTTCATATC+AGG | 0.373562 | 7_1:+79661186 | Msa1041980:exon |
GAGGATGGAGACGCAGTGTT+TGG | 0.374545 | 7_1:+79660318 | Msa1041980:CDS |
CTTCTCAGCTTTAACAGAAA+AGG | 0.376850 | 7_1:-79655662 | None:intergenic |
ACCAAATGGATTAGAATCAT+TGG | 0.377470 | 7_1:-79655396 | None:intergenic |
TGAAGAGGACAAAGCTATAC+TGG | 0.377597 | 7_1:+79660087 | Msa1041980:CDS |
TTTATCTTGTCTACAAGATC+AGG | 0.386955 | 7_1:-79660865 | None:intergenic |
ACCAACCCATGTGGAATATT+GGG | 0.388380 | 7_1:+79658629 | Msa1041980:CDS |
TCTTTCTCTATAGTGTAGTT+CGG | 0.388508 | 7_1:-79660892 | None:intergenic |
TGCTCCTTTAGAATTTATCT+TGG | 0.394381 | 7_1:-79661336 | None:intergenic |
AGTATAGCTTTGTCCTCTTC+AGG | 0.395081 | 7_1:-79660085 | None:intergenic |
ACGTCTTGAGCAACCATTAG+AGG | 0.398700 | 7_1:+79659755 | Msa1041980:CDS |
TGTTCAGCAAGCAGCTCAGC+AGG | 0.403673 | 7_1:-79659422 | None:intergenic |
TCCGCATTGTAAACAAAGAA+TGG | 0.405433 | 7_1:+79661081 | Msa1041980:CDS |
CAGCAAAGGTGGTTGAGTAC+TGG | 0.408832 | 7_1:+79659558 | Msa1041980:CDS |
TGACTCAATGTGAGCCTGTA+AGG | 0.412240 | 7_1:-79659519 | None:intergenic |
ATTGCCTGATATGAAATTAT+CGG | 0.423857 | 7_1:-79661190 | None:intergenic |
TACGTGTCTTTCCATGTAAA+AGG | 0.424095 | 7_1:-79659484 | None:intergenic |
TCTCCTTGTGGTGTGTGATT+GGG | 0.426562 | 7_1:+79659337 | Msa1041980:CDS |
CCTTGCACAATCTTTGGAGG+TGG | 0.426781 | 7_1:-79660820 | None:intergenic |
TTTAGATCAAATCACAATCA+TGG | 0.427509 | 7_1:-79661381 | None:intergenic |
GTTGAAAGCCTTTAAAGCTA+TGG | 0.428454 | 7_1:+79660287 | Msa1041980:CDS |
AGCACAACATGAAGAAGAAA+TGG | 0.434364 | 7_1:+79657399 | Msa1041980:CDS |
TACCCTTGCACAATCTTTGG+AGG | 0.435278 | 7_1:-79660823 | None:intergenic |
TGTCATGATCATAGTGAGTC+TGG | 0.437642 | 7_1:-79660795 | None:intergenic |
TGATTCTCTCTAATGGGCTC+TGG | 0.438807 | 7_1:-79659989 | None:intergenic |
AGCAAAGGTGGTTGAGTACT+GGG | 0.442488 | 7_1:+79659559 | Msa1041980:CDS |
GAAAAGACAAGTAGAAAGGA+TGG | 0.442901 | 7_1:+79655684 | Msa1041980:CDS |
AACAACATCGCCAAGGGTTA+GGG | 0.445137 | 7_1:+79654996 | Msa1041980:five_prime_UTR |
TAGAGAAAGACGGCGGCAAT+GGG | 0.445619 | 7_1:+79660905 | Msa1041980:CDS |
GATTGCGTGAAGGGCGTGCC+AGG | 0.446615 | 7_1:+79658332 | Msa1041980:CDS |
GACGACAACGATAATAGAAC+TGG | 0.446928 | 7_1:+79655158 | Msa1041980:CDS |
TGAACCATATATGGTCTTCA+AGG | 0.450157 | 7_1:+79658414 | Msa1041980:CDS |
TGACGACATCAAAATGCATC+TGG | 0.451814 | 7_1:+79658590 | Msa1041980:CDS |
TGAACACGGTTGAAATACTT+TGG | 0.452374 | 7_1:-79660745 | None:intergenic |
AGACTTACTATATCTTCATA+TGG | 0.456635 | 7_1:-79660961 | None:intergenic |
TGCTTGGTTAGGACATCAAT+TGG | 0.460472 | 7_1:-79658355 | None:intergenic |
AAATGCATCTGGATCTTGAC+AGG | 0.460556 | 7_1:+79658601 | Msa1041980:CDS |
ATATTTGTTCCACTCATATC+CGG | 0.462283 | 7_1:-79660770 | None:intergenic |
GGAGACGCAGTGTTTGGATC+TGG | 0.464689 | 7_1:+79660324 | Msa1041980:CDS |
CCGCATTGTAAACAAAGAAT+GGG | 0.467266 | 7_1:+79661082 | Msa1041980:CDS |
AGAATTATTGCATATTCGTA+TGG | 0.468144 | 7_1:+79661583 | Msa1041980:three_prime_UTR |
TGTAAAAGGTCCTTCACATC+TGG | 0.469963 | 7_1:-79659470 | None:intergenic |
ATTAGAGGATGAAGATAAAC+CGG | 0.473687 | 7_1:+79659770 | Msa1041980:CDS |
ATCAGAGCCATTGAGATGCT+TGG | 0.474442 | 7_1:-79658371 | None:intergenic |
GGCATATACTGAGGAGGATG+AGG | 0.476259 | 7_1:+79659821 | Msa1041980:CDS |
TACTGAGGAGGATGAGGAGG+AGG | 0.476354 | 7_1:+79659827 | Msa1041980:CDS |
CATCTGAATCTCGGCGTGAC+CGG | 0.477601 | 7_1:-79655124 | None:intergenic |
AATCTCGAGATGGGTCTCTC+CGG | 0.478512 | 7_1:+79661487 | Msa1041980:three_prime_UTR |
AACTCTAAATTATCTTCAGA+TGG | 0.479290 | 7_1:-79660267 | None:intergenic |
TGAGCTGCTTGCTGAACAAA+GGG | 0.483674 | 7_1:+79659427 | Msa1041980:CDS |
TTTCCGGCGGTGGTCGGAGT+CGG | 0.484022 | 7_1:-79655093 | None:intergenic |
GCGGAAACGTATGGCTGTAA+TGG | 0.488174 | 7_1:+79660197 | Msa1041980:CDS |
TTGAGATTAGTATCACCAAA+TGG | 0.494079 | 7_1:-79655410 | None:intergenic |
ACTTATAATAAAACCTGTGT+GGG | 0.494617 | 7_1:+79654951 | Msa1041980:five_prime_UTR |
ATACCTTGGCCTTGTATATG+TGG | 0.497718 | 7_1:-79659601 | None:intergenic |
ACAGCTTCCCTCAAATCAAA+AGG | 0.499844 | 7_1:-79661236 | None:intergenic |
TTGAAGACGAATACAGTATC+GGG | 0.502893 | 7_1:+79655368 | Msa1041980:CDS |
CTTGCACAATCTTTGGAGGT+GGG | 0.503952 | 7_1:-79660819 | None:intergenic |
AAATTATCTTCAGATGGAGC+TGG | 0.504991 | 7_1:-79660261 | None:intergenic |
AGAAGAAAAGACAAGTAGAA+AGG | 0.506412 | 7_1:+79655680 | Msa1041980:CDS |
ATATATGGTACAGGGTTTGA+CGG | 0.508336 | 7_1:+79658545 | Msa1041980:intron |
GATGAGGAGGAGGATGCTAA+AGG | 0.508964 | 7_1:+79659837 | Msa1041980:CDS |
TTGAAAGCCTTTAAAGCTAT+GGG | 0.509092 | 7_1:+79660288 | Msa1041980:CDS |
TATGAAATTATCGGCGGTAG+CGG | 0.509701 | 7_1:-79661181 | None:intergenic |
GGTTAGGACATCAATTGGCC+TGG | 0.512323 | 7_1:-79658350 | None:intergenic |
AGCCATTGAGATGCTTGGTT+AGG | 0.515511 | 7_1:-79658366 | None:intergenic |
CTCTCCGGCGAGTGATACCT+AGG | 0.516411 | 7_1:+79661502 | Msa1041980:three_prime_UTR |
TGAAGTGAGCCTCGATTCAC+AGG | 0.516699 | 7_1:+79660350 | Msa1041980:CDS |
TCCTCAGTATATGCCTCCTC+AGG | 0.516934 | 7_1:-79659813 | None:intergenic |
CAGAGATTAGATTGCGTGAA+GGG | 0.520377 | 7_1:+79658323 | Msa1041980:CDS |
TCGAGCTGAGTTCCAGGACT+GGG | 0.522136 | 7_1:+79658172 | Msa1041980:CDS |
CATTGTTTAACCCTAACCCT+TGG | 0.524297 | 7_1:-79655006 | None:intergenic |
CTCGAGCTGAGTTCCAGGAC+TGG | 0.526610 | 7_1:+79658171 | Msa1041980:CDS |
CTGAGCTGCTTGCTGAACAA+AGG | 0.528929 | 7_1:+79659426 | Msa1041980:CDS |
GCTATGGGAGCCATGGAGGA+TGG | 0.529591 | 7_1:+79660303 | Msa1041980:CDS |
GTCCTAACCAAGCATCTCAA+TGG | 0.529933 | 7_1:+79658364 | Msa1041980:CDS |
CTTCATATGGTGGTCCTGCA+TGG | 0.530669 | 7_1:-79660948 | None:intergenic |
GTTAATTAGTGCATTCCGTA+TGG | 0.531288 | 7_1:+79661436 | Msa1041980:three_prime_UTR |
TGGGAATACTCTCACAAGAA+AGG | 0.534055 | 7_1:+79661101 | Msa1041980:CDS |
ACTCCGACTCCGACCACCGC+CGG | 0.534200 | 7_1:+79655090 | Msa1041980:CDS |
AGGATGCAATTGATCGAGCT+AGG | 0.538391 | 7_1:+79659381 | Msa1041980:CDS |
GAAATTATCGGCGGTAGCGG+TGG | 0.538663 | 7_1:-79661178 | None:intergenic |
ATAGAGAAAGACGGCGGCAA+TGG | 0.539441 | 7_1:+79660904 | Msa1041980:CDS |
TTGAATCATCATCTGAATCT+CGG | 0.539509 | 7_1:-79655133 | None:intergenic |
CGTATAGGAGCGGAAACGTA+TGG | 0.539851 | 7_1:+79660188 | Msa1041980:intron |
CTTCACATCTGGCTCAACAC+TGG | 0.541181 | 7_1:-79659459 | None:intergenic |
AGAGGAAATTTCACAGTACA+TGG | 0.541595 | 7_1:+79655214 | Msa1041980:CDS |
GTGGCCAAGATAAATTCTAA+AGG | 0.547320 | 7_1:+79661332 | Msa1041980:three_prime_UTR |
ATTGAAGACGAATACAGTAT+CGG | 0.548388 | 7_1:+79655367 | Msa1041980:CDS |
TATTGGAGCAGGTTTATTGG+TGG | 0.548422 | 7_1:+79660698 | Msa1041980:intron |
CAAGAAGCTGAAGATGAGGC+TGG | 0.549453 | 7_1:+79660010 | Msa1041980:CDS |
AATACAGGCAGAAATTGAAA+AGG | 0.549731 | 7_1:+79657342 | Msa1041980:intron |
TTAGATCAAATCACAATCAT+GGG | 0.551398 | 7_1:-79661380 | None:intergenic |
TCATCATCATGCAACAGTTG+TGG | 0.553991 | 7_1:-79660043 | None:intergenic |
AAAACACCTCCACATATACA+AGG | 0.555906 | 7_1:+79659592 | Msa1041980:CDS |
TGGAAAGACACGTACAGAGT+TGG | 0.555932 | 7_1:+79659493 | Msa1041980:CDS |
TGATACCTAGGGATGACGAT+AGG | 0.558897 | 7_1:+79661514 | Msa1041980:three_prime_UTR |
TTCTAGGAAGGAACACCATA+CGG | 0.559392 | 7_1:-79661451 | None:intergenic |
TGCATTATTAGATTCCATGC+AGG | 0.559588 | 7_1:+79660934 | Msa1041980:CDS |
GAATCAAGAAGCTGAAGATG+AGG | 0.559806 | 7_1:+79660006 | Msa1041980:CDS |
CAGTGTTGAGCCAGATGTGA+AGG | 0.561664 | 7_1:+79659460 | Msa1041980:CDS |
GATAATTTCATATCAGGCAA+TGG | 0.562061 | 7_1:+79661192 | Msa1041980:exon |
TTCCAGAACAATCACAGAAG+AGG | 0.563012 | 7_1:+79655196 | Msa1041980:CDS |
ATTGAGTCAGAGATGCGTAC+TGG | 0.566781 | 7_1:+79659533 | Msa1041980:CDS |
CACTGCGTCTCCATCCTCCA+TGG | 0.573173 | 7_1:-79660313 | None:intergenic |
CAGATTAACAACATCGCCAA+GGG | 0.573344 | 7_1:+79654990 | Msa1041980:five_prime_UTR |
GATACCTAGGGATGACGATA+GGG | 0.575644 | 7_1:+79661515 | Msa1041980:three_prime_UTR |
AGATAAATTCTAAAGGAGCA+TGG | 0.580247 | 7_1:+79661339 | Msa1041980:three_prime_UTR |
TTATCGAGTATATTCTAGGA+AGG | 0.580417 | 7_1:-79661463 | None:intergenic |
ATCATGTCAAGAGCACGCTC+CGG | 0.581483 | 7_1:-79659789 | None:intergenic |
ACTCGATAAGAATCTCGAGA+TGG | 0.584204 | 7_1:+79661477 | Msa1041980:three_prime_UTR |
CTCGATAAGAATCTCGAGAT+GGG | 0.584469 | 7_1:+79661478 | Msa1041980:three_prime_UTR |
CCACCTCCAAAGATTGTGCA+AGG | 0.584490 | 7_1:+79660820 | Msa1041980:CDS |
GTTGCATGATGATGAAAATG+AGG | 0.585801 | 7_1:+79660051 | Msa1041980:CDS |
CATCCCTAGGTATCACTCGC+CGG | 0.586976 | 7_1:-79661506 | None:intergenic |
TCAGATTAACAACATCGCCA+AGG | 0.587348 | 7_1:+79654989 | Msa1041980:five_prime_UTR |
TCCCAATATTCCACATGGGT+TGG | 0.589582 | 7_1:-79658630 | None:intergenic |
CCCATTCTTTGTTTACAATG+CGG | 0.589870 | 7_1:-79661082 | None:intergenic |
CTTTAAAGCTATGGGAGCCA+TGG | 0.593812 | 7_1:+79660296 | Msa1041980:CDS |
ACTCATATCCGGTGTGAACA+CGG | 0.594826 | 7_1:-79660759 | None:intergenic |
ATTGATCGAGCTAGGGTGCG+TGG | 0.595446 | 7_1:+79659389 | Msa1041980:CDS |
AAAATCTACTGTTTGAAATG+TGG | 0.597918 | 7_1:+79661313 | Msa1041980:three_prime_UTR |
GTCAGATGCAGAGTCATCAT+CGG | 0.601881 | 7_1:-79655069 | None:intergenic |
AAAACGAATTCAGGAAGCAA+TGG | 0.607367 | 7_1:+79660230 | Msa1041980:CDS |
GGATGCAATTGATCGAGCTA+GGG | 0.616184 | 7_1:+79659382 | Msa1041980:CDS |
ATATACTGAGGAGGATGAGG+AGG | 0.617133 | 7_1:+79659824 | Msa1041980:CDS |
CACTTATAATAAAACCTGTG+TGG | 0.619395 | 7_1:+79654950 | Msa1041980:five_prime_UTR |
CTTCATGTAGGCTCTCCTTG+TGG | 0.620002 | 7_1:+79659325 | Msa1041980:intron |
TCAATCGAATTTCCCCACAC+AGG | 0.620333 | 7_1:-79654964 | None:intergenic |
GCTCCCAATCACACACCACA+AGG | 0.625505 | 7_1:-79659340 | None:intergenic |
TTTAAATGCACATTCGAACG+TGG | 0.625849 | 7_1:+79661125 | Msa1041980:CDS |
TAAAGCTATGGGAGCCATGG+AGG | 0.627137 | 7_1:+79660299 | Msa1041980:CDS |
GCGTACTGGTACAGCAAAGG+TGG | 0.627923 | 7_1:+79659547 | Msa1041980:CDS |
CTTACTATATCTTCATATGG+TGG | 0.634403 | 7_1:-79660958 | None:intergenic |
ACCGCCGGAAAACTAGTCGC+CGG | 0.636310 | 7_1:+79655105 | Msa1041980:CDS |
TCAGCAAGCAGCTCAGCAGG+AGG | 0.636929 | 7_1:-79659419 | None:intergenic |
GTGTTCACACCGGATATGAG+TGG | 0.640725 | 7_1:+79660761 | Msa1041980:CDS |
TCTCCGGCGAGTGATACCTA+GGG | 0.641290 | 7_1:+79661503 | Msa1041980:three_prime_UTR |
ATTGAGCGCGATGTTACTCA+AGG | 0.644189 | 7_1:+79655625 | Msa1041980:CDS |
GATGCGTACTGGTACAGCAA+AGG | 0.649100 | 7_1:+79659544 | Msa1041980:CDS |
TCAGAGATTAGATTGCGTGA+AGG | 0.649679 | 7_1:+79658322 | Msa1041980:CDS |
AAAATGATTCATCAGCAGAA+CGG | 0.650693 | 7_1:-79659964 | None:intergenic |
TATTTCAACCGTGTTCACAC+CGG | 0.650995 | 7_1:+79660751 | Msa1041980:CDS |
CCTCCACATATACAAGGCCA+AGG | 0.652292 | 7_1:+79659598 | Msa1041980:CDS |
GGAAGCTATTGATCCTGAAG+AGG | 0.658125 | 7_1:+79660072 | Msa1041980:CDS |
AACCCATGTGGAATATTGGG+AGG | 0.659144 | 7_1:+79658632 | Msa1041980:CDS |
TGCTCTTGACATGATACCTG+AGG | 0.662422 | 7_1:+79659797 | Msa1041980:CDS |
GCCTGATATGAAATTATCGG+CGG | 0.663501 | 7_1:-79661187 | None:intergenic |
ATACCTCCCAATATTCCACA+TGG | 0.666278 | 7_1:-79658635 | None:intergenic |
GAAACAATACCTGTGAATCG+AGG | 0.669091 | 7_1:-79660359 | None:intergenic |
AACTACACTATAGAGAAAGA+CGG | 0.678317 | 7_1:+79660895 | Msa1041980:CDS |
TGAGGAGGCATATACTGAGG+AGG | 0.678998 | 7_1:+79659815 | Msa1041980:CDS |
CAGGGCAACACCAACCCATG+TGG | 0.679640 | 7_1:+79658620 | Msa1041980:CDS |
CACCTCCAAAGATTGTGCAA+GGG | 0.681508 | 7_1:+79660821 | Msa1041980:CDS |
TCTTGACATGATACCTGAGG+AGG | 0.683745 | 7_1:+79659800 | Msa1041980:CDS |
TTTCTCTATAGTGTAGTTCG+GGG | 0.684958 | 7_1:-79660890 | None:intergenic |
GGCATGACAAGTACAGACCA+AGG | 0.685007 | 7_1:+79660719 | Msa1041980:CDS |
CTTATAATAAAACCTGTGTG+GGG | 0.685393 | 7_1:+79654952 | Msa1041980:five_prime_UTR |
AGAGAAAGACGGCGGCAATG+GGG | 0.685515 | 7_1:+79660906 | Msa1041980:CDS |
ACCTGAGGAGGCATATACTG+AGG | 0.687934 | 7_1:+79659812 | Msa1041980:CDS |
AATGCATCTGGATCTTGACA+GGG | 0.688800 | 7_1:+79658602 | Msa1041980:CDS |
CAAGGGTTAGGGTTAAACAA+TGG | 0.699057 | 7_1:+79655007 | Msa1041980:exon |
TAGGGTTAAACAATGGCGAG+CGG | 0.710396 | 7_1:+79655014 | Msa1041980:exon |
TACCTCCCAATATTCCACAT+GGG | 0.710728 | 7_1:-79658634 | None:intergenic |
CCTTGGCCTTGTATATGTGG+AGG | 0.714941 | 7_1:-79659598 | None:intergenic |
AAAGGTGGTTGAGTACTGGG+AGG | 0.739956 | 7_1:+79659562 | Msa1041980:CDS |
TACACTATAGAGAAAGACGG+CGG | 0.747701 | 7_1:+79660898 | Msa1041980:CDS |
GAGCTGCTTGCTGAACAAAG+GGG | 0.752410 | 7_1:+79659428 | Msa1041980:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAATACAAATAATTAATT+CGG | - | chr7_1:79657122-79657141 | None:intergenic | 10.0% |
!! | AATTAATTATTTGTATTCAT+TGG | + | chr7_1:79657122-79657141 | Msa1041980:intron | 10.0% |
!! | TTAATTAATGATTTGATATA+TGG | + | chr7_1:79658530-79658549 | Msa1041980:intron | 10.0% |
!!! | TGAGTATATAAATTATATTT+TGG | + | chr7_1:79660163-79660182 | Msa1041980:intron | 10.0% |
!!! | ATATATAATTTGAATTTTTC+TGG | + | chr7_1:79660390-79660409 | Msa1041980:intron | 10.0% |
!!! | GAAATAAGATTTTTTTTTAA+CGG | - | chr7_1:79661038-79661057 | None:intergenic | 10.0% |
!!! | ATGTTTTTTTTTTTCTTCTA+TGG | + | chr7_1:79655441-79655460 | Msa1041980:intron | 15.0% |
!! | TAAATATTTCAGATAAATAC+TGG | + | chr7_1:79655530-79655549 | Msa1041980:intron | 15.0% |
!! | AATCATATATATCTTCATAT+TGG | - | chr7_1:79655559-79655578 | None:intergenic | 15.0% |
!!! | ACCTAAAAAATGTTATTTTT+AGG | + | chr7_1:79655584-79655603 | Msa1041980:intron | 15.0% |
!!! | ACCTAAAAATAACATTTTTT+AGG | - | chr7_1:79655588-79655607 | None:intergenic | 15.0% |
!! | AAAAAAATAGAATTAACACT+AGG | + | chr7_1:79656122-79656141 | Msa1041980:intron | 15.0% |
!!! | AGTATTGAAATTTTTTCAAA+AGG | - | chr7_1:79656640-79656659 | None:intergenic | 15.0% |
!!! | AAAGAAAATAACTTTTTTGT+AGG | - | chr7_1:79657978-79657997 | None:intergenic | 15.0% |
!!! | TATTAATTTGCTTCAAATAT+AGG | + | chr7_1:79659686-79659705 | Msa1041980:intron | 15.0% |
!!! | CTGATTTTTTTTTTTTGTTC+AGG | + | chr7_1:79655325-79655344 | Msa1041980:intron | 20.0% |
!!! | ATGTTATTTTTAGGTTTGTT+TGG | + | chr7_1:79655593-79655612 | Msa1041980:intron | 20.0% |
!! | TCAATTGTTTGAATTTACAT+GGG | - | chr7_1:79656212-79656231 | None:intergenic | 20.0% |
!! | TAAAGTCAATCTCTTAAATT+TGG | - | chr7_1:79656395-79656414 | None:intergenic | 20.0% |
!!! | AAACAAGTTTTAAGAACAAT+CGG | + | chr7_1:79656747-79656766 | Msa1041980:intron | 20.0% |
!! | TTGTTAGTTAATACGTATTA+TGG | + | chr7_1:79657443-79657462 | Msa1041980:intron | 20.0% |
!! | TGTTAGTTAATACGTATTAT+GGG | + | chr7_1:79657444-79657463 | Msa1041980:intron | 20.0% |
!! | TTAAACTAATATGTCAGATT+AGG | - | chr7_1:79657541-79657560 | None:intergenic | 20.0% |
!! | ATTATAACAGTTGAAACTTA+GGG | - | chr7_1:79657644-79657663 | None:intergenic | 20.0% |
!! | AATTATAACAGTTGAAACTT+AGG | - | chr7_1:79657645-79657664 | None:intergenic | 20.0% |
!! | ATTATAACAGTTGAAACTTA+GGG | - | chr7_1:79657644-79657663 | None:intergenic | 20.0% |
!! | AATTATAACAGTTGAAACTT+AGG | - | chr7_1:79657645-79657664 | None:intergenic | 20.0% |
!!! | AAGTTATTTTCTTTTAACCA+CGG | + | chr7_1:79657984-79658003 | Msa1041980:intron | 20.0% |
!!! | CAAAAACTGTGTTATTTTAT+TGG | + | chr7_1:79658102-79658121 | Msa1041980:intron | 20.0% |
!! | AGAAATAAATGAACCATATA+TGG | + | chr7_1:79658405-79658424 | Msa1041980:CDS | 20.0% |
!!! | TCAAAAAGTGCTTATATTTA+GGG | - | chr7_1:79658875-79658894 | None:intergenic | 20.0% |
!! | TGTATAAGGGTTTATATTTA+TGG | - | chr7_1:79658911-79658930 | None:intergenic | 20.0% |
!! | AAGTTAGTAGTATTAATTAG+GGG | - | chr7_1:79658973-79658992 | None:intergenic | 20.0% |
!! | GAAGTTAGTAGTATTAATTA+GGG | - | chr7_1:79658974-79658993 | None:intergenic | 20.0% |
!! | AGAAGTTAGTAGTATTAATT+AGG | - | chr7_1:79658975-79658994 | None:intergenic | 20.0% |
!! | AATTAATACTACTAACTTCT+TGG | + | chr7_1:79658975-79658994 | Msa1041980:intron | 20.0% |
!! | TTTCTTAAGAAATGTGAAAA+AGG | + | chr7_1:79659133-79659152 | Msa1041980:intron | 20.0% |
!!! | AGTAAATATTTTAGTTGGAT+TGG | + | chr7_1:79659186-79659205 | Msa1041980:intron | 20.0% |
!!! | TGAAAGTCATTTAGTTTTTT+TGG | - | chr7_1:79659215-79659234 | None:intergenic | 20.0% |
!! | AAAGCTTAGTTAAGATTTAT+TGG | + | chr7_1:79659296-79659315 | Msa1041980:intron | 20.0% |
!! | GCATTAGAACAAATATTTAA+AGG | - | chr7_1:79659664-79659683 | None:intergenic | 20.0% |
!!! | AAGGTATATACATTTTGTTT+CGG | + | chr7_1:79659856-79659875 | Msa1041980:intron | 20.0% |
!!! | GTTGTTCATTACTTTTTTAT+TGG | + | chr7_1:79659883-79659902 | Msa1041980:intron | 20.0% |
!! | TATACTCATAATAAAAGTAG+AGG | - | chr7_1:79660151-79660170 | None:intergenic | 20.0% |
!!! | AATTATATTTTGGTACGTAT+AGG | + | chr7_1:79660173-79660192 | Msa1041980:intron | 20.0% |
!! | AAAAATAGGATAGAATGATT+CGG | + | chr7_1:79660448-79660467 | Msa1041980:intron | 20.0% |
!! | TCAAAAACTTAAAAGTTGAA+AGG | - | chr7_1:79660665-79660684 | None:intergenic | 20.0% |
!!! | TTTTAAGTTTTTGACAATTC+TGG | + | chr7_1:79660671-79660690 | Msa1041980:intron | 20.0% |
!!! | ACACAGGTTTTATTATAAGT+GGG | - | chr7_1:79654951-79654970 | None:intergenic | 25.0% |
! | ACTTATAATAAAACCTGTGT+GGG | + | chr7_1:79654951-79654970 | Msa1041980:five_prime_UTR | 25.0% |
! | TGTTTATGTTTCTCCATATA+TGG | + | chr7_1:79655744-79655763 | Msa1041980:intron | 25.0% |
! | TTAAGAGTTTCAAATTGAAG+CGG | + | chr7_1:79655781-79655800 | Msa1041980:intron | 25.0% |
!! | TCTTTAAGCTTTAGCTTAAT+AGG | + | chr7_1:79655831-79655850 | Msa1041980:intron | 25.0% |
! | TAAGTTAATCCAAACATACT+CGG | - | chr7_1:79655907-79655926 | None:intergenic | 25.0% |
!! | AGTTTGACACTATTTTATCT+TGG | + | chr7_1:79656014-79656033 | Msa1041980:intron | 25.0% |
!! | GTTTGACACTATTTTATCTT+GGG | + | chr7_1:79656015-79656034 | Msa1041980:intron | 25.0% |
! | CTCAATTGTTTGAATTTACA+TGG | - | chr7_1:79656213-79656232 | None:intergenic | 25.0% |
! | TATTATTACCCAAATCTTGA+GGG | - | chr7_1:79656315-79656334 | None:intergenic | 25.0% |
! | TTATTATTACCCAAATCTTG+AGG | - | chr7_1:79656316-79656335 | None:intergenic | 25.0% |
! | AGATTTGGGTAATAATAAGA+CGG | + | chr7_1:79656318-79656337 | Msa1041980:intron | 25.0% |
! | AAATGATAGGTTATATGACA+AGG | - | chr7_1:79656451-79656470 | None:intergenic | 25.0% |
! | TGAAGCATGTATTAAATGAT+AGG | - | chr7_1:79656464-79656483 | None:intergenic | 25.0% |
! | AACATTCCATGTATATTTCA+TGG | + | chr7_1:79656488-79656507 | Msa1041980:intron | 25.0% |
! | ACATTCCATGTATATTTCAT+GGG | + | chr7_1:79656489-79656508 | Msa1041980:intron | 25.0% |
!! | AAATAATTTGTATACGGACT+TGG | + | chr7_1:79656579-79656598 | Msa1041980:intron | 25.0% |
!!! | ACATGAATCACTTTTGTTTT+AGG | + | chr7_1:79656781-79656800 | Msa1041980:intron | 25.0% |
!!! | CATGAATCACTTTTGTTTTA+GGG | + | chr7_1:79656782-79656801 | Msa1041980:intron | 25.0% |
! | AAGTTGGATATTGAAGAAAA+TGG | - | chr7_1:79657009-79657028 | None:intergenic | 25.0% |
!! | CCAGTTTAAAATGATAAAGT+TGG | - | chr7_1:79657025-79657044 | None:intergenic | 25.0% |
!! | CCAACTTTATCATTTTAAAC+TGG | + | chr7_1:79657022-79657041 | Msa1041980:intron | 25.0% |
! | TTATTTGTATTCATTGGAGA+TGG | + | chr7_1:79657128-79657147 | Msa1041980:intron | 25.0% |
! | TTATTACCTATTCCTAGTTA+TGG | - | chr7_1:79657191-79657210 | None:intergenic | 25.0% |
! | AAATTGAAAAGGTGAAAAAG+AGG | + | chr7_1:79657353-79657372 | Msa1041980:CDS | 25.0% |
!! | TTTAAACATGAGTCTAAGAT+TGG | + | chr7_1:79657556-79657575 | Msa1041980:intron | 25.0% |
!!! | TTTGTTGTTCTTGTCTAATA+TGG | + | chr7_1:79657711-79657730 | Msa1041980:intron | 25.0% |
! | GAAACTTAGGGATTAAATAA+AGG | - | chr7_1:79657862-79657881 | None:intergenic | 25.0% |
!!! | TTTGTTGTTCTTGTCTAATA+TGG | + | chr7_1:79657711-79657730 | Msa1041980:intron | 25.0% |
!!! | AGTTATTTTCTTTTAACCAC+GGG | + | chr7_1:79657985-79658004 | Msa1041980:intron | 25.0% |
! | TGACATAAGTGTTAGATTAA+TGG | + | chr7_1:79658076-79658095 | Msa1041980:intron | 25.0% |
! | TTGCATAATTAAACAGCTTT+AGG | - | chr7_1:79658483-79658502 | None:intergenic | 25.0% |
! | AATGATTTGATATATGGTAC+AGG | + | chr7_1:79658536-79658555 | Msa1041980:intron | 25.0% |
! | ATGATTTGATATATGGTACA+GGG | + | chr7_1:79658537-79658556 | Msa1041980:intron | 25.0% |
!!! | CATTTATGTTGTTTCAGATA+CGG | - | chr7_1:79658715-79658734 | None:intergenic | 25.0% |
!!! | CTCAAAAAGTGCTTATATTT+AGG | - | chr7_1:79658876-79658895 | None:intergenic | 25.0% |
!! | TATTAATTAGGGGTATGTTT+AGG | - | chr7_1:79658963-79658982 | None:intergenic | 25.0% |
! | ACACAAAATACTACAAACAA+AGG | + | chr7_1:79659059-79659078 | Msa1041980:intron | 25.0% |
! | GTGTTGCATAAAACAATAAA+CGG | - | chr7_1:79659247-79659266 | None:intergenic | 25.0% |
!!! | ATTGTTTTATGCAACACATT+TGG | + | chr7_1:79659250-79659269 | Msa1041980:intron | 25.0% |
!! | TCAAATATAGGCTTGTTTAA+AGG | + | chr7_1:79659698-79659717 | Msa1041980:intron | 25.0% |
! | CGCGTGATTATTAAATTTAA+TGG | + | chr7_1:79660121-79660140 | Msa1041980:intron | 25.0% |
! | AACTCTAAATTATCTTCAGA+TGG | - | chr7_1:79660270-79660289 | None:intergenic | 25.0% |
! | TAGAAAATATGCTGTTAGAT+AGG | + | chr7_1:79660414-79660433 | Msa1041980:intron | 25.0% |
!! | AGGTTAGCTCATAAAAAAAT+AGG | + | chr7_1:79660434-79660453 | Msa1041980:intron | 25.0% |
! | AAAGAGGTAATTGAAGAATA+TGG | - | chr7_1:79660544-79660563 | None:intergenic | 25.0% |
! | TTGACAATTCTGGTAAATAT+TGG | + | chr7_1:79660681-79660700 | Msa1041980:intron | 25.0% |
! | AGACTTACTATATCTTCATA+TGG | - | chr7_1:79660964-79660983 | None:intergenic | 25.0% |
! | TAATAGTTAGTGTGTTATGT+CGG | - | chr7_1:79661008-79661027 | None:intergenic | 25.0% |
! | ATTGCCTGATATGAAATTAT+CGG | - | chr7_1:79661193-79661212 | None:intergenic | 25.0% |
!! | CACGTATTTGCTAAAAAAAA+TGG | - | chr7_1:79661271-79661290 | None:intergenic | 25.0% |
!! | ATTTCAAACAGTAGATTTTG+TGG | - | chr7_1:79661312-79661331 | None:intergenic | 25.0% |
!! | AAAATCTACTGTTTGAAATG+TGG | + | chr7_1:79661313-79661332 | Msa1041980:three_prime_UTR | 25.0% |
! | TTAGATCAAATCACAATCAT+GGG | - | chr7_1:79661383-79661402 | None:intergenic | 25.0% |
! | TTTAGATCAAATCACAATCA+TGG | - | chr7_1:79661384-79661403 | None:intergenic | 25.0% |
! | TGCACTAATTAACTAGTATA+TGG | - | chr7_1:79661429-79661448 | None:intergenic | 25.0% |
! | ATTCTTATCGAGTATATTCT+AGG | - | chr7_1:79661470-79661489 | None:intergenic | 25.0% |
! | AGAATTATTGCATATTCGTA+TGG | + | chr7_1:79661583-79661602 | Msa1041980:three_prime_UTR | 25.0% |
! | TCGTATGGATAATAACAAAA+AGG | + | chr7_1:79661598-79661617 | Msa1041980:three_prime_UTR | 25.0% |
! | CGTATGGATAATAACAAAAA+GGG | + | chr7_1:79661599-79661618 | Msa1041980:three_prime_UTR | 25.0% |
!!! | CACACAGGTTTTATTATAAG+TGG | - | chr7_1:79654952-79654971 | None:intergenic | 30.0% |
CACTTATAATAAAACCTGTG+TGG | + | chr7_1:79654950-79654969 | Msa1041980:five_prime_UTR | 30.0% | |
CTTATAATAAAACCTGTGTG+GGG | + | chr7_1:79654952-79654971 | Msa1041980:five_prime_UTR | 30.0% | |
TTGAATCATCATCTGAATCT+CGG | - | chr7_1:79655136-79655155 | None:intergenic | 30.0% | |
ATTGAAGACGAATACAGTAT+CGG | + | chr7_1:79655367-79655386 | Msa1041980:CDS | 30.0% | |
TCCAATGATTCTAATCCATT+TGG | + | chr7_1:79655395-79655414 | Msa1041980:CDS | 30.0% | |
!! | ACCAAATGGATTAGAATCAT+TGG | - | chr7_1:79655399-79655418 | None:intergenic | 30.0% |
TTGAGATTAGTATCACCAAA+TGG | - | chr7_1:79655413-79655432 | None:intergenic | 30.0% | |
AGAAGAAAAGACAAGTAGAA+AGG | + | chr7_1:79655680-79655699 | Msa1041980:CDS | 30.0% | |
TTCAGAACACTAACCATATA+TGG | - | chr7_1:79655760-79655779 | None:intergenic | 30.0% | |
ATTTCATACAAGCATGACAT+AGG | + | chr7_1:79655864-79655883 | Msa1041980:intron | 30.0% | |
AAGTTAATCCAAACATACTC+GGG | - | chr7_1:79655906-79655925 | None:intergenic | 30.0% | |
ACTTATTTGAGCTTATCTAC+TGG | + | chr7_1:79655922-79655941 | Msa1041980:intron | 30.0% | |
CTTATTTGAGCTTATCTACT+GGG | + | chr7_1:79655923-79655942 | Msa1041980:intron | 30.0% | |
TATAAGCTGTTTATCCAAAC+AGG | + | chr7_1:79656083-79656102 | Msa1041980:intron | 30.0% | |
ATAAGCTGTTTATCCAAACA+GGG | + | chr7_1:79656084-79656103 | Msa1041980:intron | 30.0% | |
ATTATTACCCAAATCTTGAG+GGG | - | chr7_1:79656314-79656333 | None:intergenic | 30.0% | |
CATTCCATGTATATTTCATG+GGG | + | chr7_1:79656490-79656509 | Msa1041980:intron | 30.0% | |
! | GGTCGGAAATAATTTGTATA+CGG | + | chr7_1:79656573-79656592 | Msa1041980:intron | 30.0% |
!!! | TTTGTTTTAGGGTTTGAAAG+TGG | + | chr7_1:79656793-79656812 | Msa1041980:intron | 30.0% |
AGTCTATTGAAACCATAACT+AGG | + | chr7_1:79657176-79657195 | Msa1041980:intron | 30.0% | |
TTGAAACCATAACTAGGAAT+AGG | + | chr7_1:79657182-79657201 | Msa1041980:intron | 30.0% | |
!! | GCTATTCATTAGTCTTCTTT+AGG | + | chr7_1:79657218-79657237 | Msa1041980:intron | 30.0% |
!! | TCATTAGTCTTCTTTAGGTA+AGG | + | chr7_1:79657223-79657242 | Msa1041980:intron | 30.0% |
TGTTCTCTCAATTACAATAC+AGG | + | chr7_1:79657327-79657346 | Msa1041980:intron | 30.0% | |
AATACAGGCAGAAATTGAAA+AGG | + | chr7_1:79657342-79657361 | Msa1041980:intron | 30.0% | |
CTAACAACAAATAATGAGAG+AGG | - | chr7_1:79657430-79657449 | None:intergenic | 30.0% | |
GAAACTTAGGGATTAGATAA+AGG | - | chr7_1:79657632-79657651 | None:intergenic | 30.0% | |
TACATAGCAGTTCTTGTATT+TGG | + | chr7_1:79657754-79657773 | Msa1041980:intron | 30.0% | |
ACATAGCAGTTCTTGTATTT+GGG | + | chr7_1:79657755-79657774 | Msa1041980:intron | 30.0% | |
!!! | TAGACACCAATCTTTTTTGT+AGG | - | chr7_1:79657795-79657814 | None:intergenic | 30.0% |
!!! | TTTTTTGTAGGCGACATAAT+TGG | - | chr7_1:79657966-79657985 | None:intergenic | 30.0% |
!!! | ATTTTGAGGCCCAAATATAA+TGG | + | chr7_1:79658028-79658047 | Msa1041980:intron | 30.0% |
TGCACATTGCCATTATATTT+GGG | - | chr7_1:79658040-79658059 | None:intergenic | 30.0% | |
TTGCACATTGCCATTATATT+TGG | - | chr7_1:79658041-79658060 | None:intergenic | 30.0% | |
AAATATAATGGCAATGTGCA+AGG | + | chr7_1:79658040-79658059 | Msa1041980:intron | 30.0% | |
AATATAATGGCAATGTGCAA+GGG | + | chr7_1:79658041-79658060 | Msa1041980:intron | 30.0% | |
TTTGACAAATTCTTTCTTCC+AGG | + | chr7_1:79658127-79658146 | Msa1041980:intron | 30.0% | |
AAATGGAACTGCAGATTAAT+CGG | - | chr7_1:79658283-79658302 | None:intergenic | 30.0% | |
TGACTTTGCTTTGATCAAAA+TGG | - | chr7_1:79658300-79658319 | None:intergenic | 30.0% | |
!! | ATTTTGATCAAAGCAAAGTC+AGG | + | chr7_1:79658299-79658318 | Msa1041980:CDS | 30.0% |
TTTACCTTGAAGACCATATA+TGG | - | chr7_1:79658421-79658440 | None:intergenic | 30.0% | |
! | CGTATCTGAAACAACATAAA+TGG | + | chr7_1:79658713-79658732 | Msa1041980:intron | 30.0% |
! | AAAGTGCTTATATTTAGGGA+CGG | - | chr7_1:79658871-79658890 | None:intergenic | 30.0% |
! | ATCCTTTGTTTGTAGTACTT+TGG | - | chr7_1:79659022-79659041 | None:intergenic | 30.0% |
! | TGTTTGTAGTATTTTGTGTG+TGG | - | chr7_1:79659058-79659077 | None:intergenic | 30.0% |
!!! | GAGGGAGTAAATATTTTAGT+TGG | + | chr7_1:79659181-79659200 | Msa1041980:intron | 30.0% |
!! | TCTTAACTAAGCTTTGAAGA+AGG | - | chr7_1:79659291-79659310 | None:intergenic | 30.0% |
!!! | TATGTGGAGGTGTTTTAAAA+TGG | - | chr7_1:79659588-79659607 | None:intergenic | 30.0% |
TAATGTGATGAAGAATACCT+TGG | - | chr7_1:79659618-79659637 | None:intergenic | 30.0% | |
! | AAGGCATCTGAAAGAATAAA+AGG | - | chr7_1:79659645-79659664 | None:intergenic | 30.0% |
ATTAGAGGATGAAGATAAAC+CGG | + | chr7_1:79659770-79659789 | Msa1041980:CDS | 30.0% | |
AAAATGATTCATCAGCAGAA+CGG | - | chr7_1:79659967-79659986 | None:intergenic | 30.0% | |
!! | TTGAAAGCCTTTAAAGCTAT+GGG | + | chr7_1:79660288-79660307 | Msa1041980:CDS | 30.0% |
AAATATTGGAGCAGGTTTAT+TGG | + | chr7_1:79660695-79660714 | Msa1041980:intron | 30.0% | |
ATATTTGTTCCACTCATATC+CGG | - | chr7_1:79660773-79660792 | None:intergenic | 30.0% | |
TTTATCTTGTCTACAAGATC+AGG | - | chr7_1:79660868-79660887 | None:intergenic | 30.0% | |
TCTTTCTCTATAGTGTAGTT+CGG | - | chr7_1:79660895-79660914 | None:intergenic | 30.0% | |
AACTACACTATAGAGAAAGA+CGG | + | chr7_1:79660895-79660914 | Msa1041980:CDS | 30.0% | |
CTTACTATATCTTCATATGG+TGG | - | chr7_1:79660961-79660980 | None:intergenic | 30.0% | |
GATAATTTCATATCAGGCAA+TGG | + | chr7_1:79661192-79661211 | Msa1041980:exon | 30.0% | |
!! | TGCTCCTTTAGAATTTATCT+TGG | - | chr7_1:79661339-79661358 | None:intergenic | 30.0% |
! | AGATAAATTCTAAAGGAGCA+TGG | + | chr7_1:79661339-79661358 | Msa1041980:three_prime_UTR | 30.0% |
! | TTATCGAGTATATTCTAGGA+AGG | - | chr7_1:79661466-79661485 | None:intergenic | 30.0% |
AGAGGAAATTTCACAGTACA+TGG | + | chr7_1:79655214-79655233 | Msa1041980:CDS | 35.0% | |
TTGAAGACGAATACAGTATC+GGG | + | chr7_1:79655368-79655387 | Msa1041980:CDS | 35.0% | |
! | CTTCTCAGCTTTAACAGAAA+AGG | - | chr7_1:79655665-79655684 | None:intergenic | 35.0% |
GAAAAGACAAGTAGAAAGGA+TGG | + | chr7_1:79655684-79655703 | Msa1041980:CDS | 35.0% | |
GTTTCAAATTGAAGCGGAAT+CGG | + | chr7_1:79655787-79655806 | Msa1041980:intron | 35.0% | |
! | AGCTTTAGCTTAATAGGTGA+TGG | + | chr7_1:79655837-79655856 | Msa1041980:intron | 35.0% |
AACAATAACCCGAGTATGTT+TGG | + | chr7_1:79655895-79655914 | Msa1041980:intron | 35.0% | |
TTGTGAGTTGTGACATTGTT+TGG | + | chr7_1:79655954-79655973 | Msa1041980:intron | 35.0% | |
TGTGAGTTGTGACATTGTTT+GGG | + | chr7_1:79655955-79655974 | Msa1041980:intron | 35.0% | |
TTCATAAGCGCTTATGCTAT+TGG | + | chr7_1:79656054-79656073 | Msa1041980:intron | 35.0% | |
TGTTTATCCAAACAGGGTTT+AGG | + | chr7_1:79656090-79656109 | Msa1041980:intron | 35.0% | |
AGCAGTATGATTAGTAGAGT+GGG | - | chr7_1:79656154-79656173 | None:intergenic | 35.0% | |
GATGGTCTAGGTATTTAAAG+TGG | - | chr7_1:79656263-79656282 | None:intergenic | 35.0% | |
AACATTTGCATAGATGGTCT+AGG | - | chr7_1:79656275-79656294 | None:intergenic | 35.0% | |
CGTCAAAACATTTGCATAGA+TGG | - | chr7_1:79656281-79656300 | None:intergenic | 35.0% | |
TTATTACCCAAATCTTGAGG+GGG | - | chr7_1:79656313-79656332 | None:intergenic | 35.0% | |
TCATCTTACTAACACTACTC+TGG | + | chr7_1:79656353-79656372 | Msa1041980:intron | 35.0% | |
CCTACTGTTGGAAAATATGT+AGG | - | chr7_1:79656420-79656439 | None:intergenic | 35.0% | |
! | CCTACATATTTTCCAACAGT+AGG | + | chr7_1:79656417-79656436 | Msa1041980:intron | 35.0% |
AAGGTTAACATTCCTACTGT+TGG | - | chr7_1:79656432-79656451 | None:intergenic | 35.0% | |
CATGTATATTTCATGGGGAA+GGG | + | chr7_1:79656495-79656514 | Msa1041980:intron | 35.0% | |
!! | CTCTGCTTTGATTTTACGTT+AGG | + | chr7_1:79656532-79656551 | Msa1041980:intron | 35.0% |
TTTACGTTAGGACATGACAA+TGG | + | chr7_1:79656544-79656563 | Msa1041980:intron | 35.0% | |
TTTGAAAGTGGTACACAAAC+AGG | + | chr7_1:79656805-79656824 | Msa1041980:intron | 35.0% | |
TCATTTCTGTAGTACGTGTT+AGG | + | chr7_1:79656851-79656870 | Msa1041980:intron | 35.0% | |
GGCAACATTAATAGGAACTT+GGG | - | chr7_1:79656893-79656912 | None:intergenic | 35.0% | |
AGGCAACATTAATAGGAACT+TGG | - | chr7_1:79656894-79656913 | None:intergenic | 35.0% | |
AAACCAGAGGCAACATTAAT+AGG | - | chr7_1:79656901-79656920 | None:intergenic | 35.0% | |
AAGTGCAGGGATTAAATGAA+TGG | - | chr7_1:79656953-79656972 | None:intergenic | 35.0% | |
!! | AACAGTTTTCAGAAAGTGCA+GGG | - | chr7_1:79656966-79656985 | None:intergenic | 35.0% |
!! | AAACAGTTTTCAGAAAGTGC+AGG | - | chr7_1:79656967-79656986 | None:intergenic | 35.0% |
TAATTCGGAATAAGTGCAGA+AGG | - | chr7_1:79657107-79657126 | None:intergenic | 35.0% | |
TTGTATTCATTGGAGATGGT+TGG | + | chr7_1:79657132-79657151 | Msa1041980:intron | 35.0% | |
TGTATTCATTGGAGATGGTT+GGG | + | chr7_1:79657133-79657152 | Msa1041980:intron | 35.0% | |
AGCACAACATGAAGAAGAAA+TGG | + | chr7_1:79657399-79657418 | Msa1041980:CDS | 35.0% | |
ATGGCATACCAATTATGTCA+AGG | + | chr7_1:79657730-79657749 | Msa1041980:intron | 35.0% | |
! | CTATGTAGCCTTGACATAAT+TGG | - | chr7_1:79657741-79657760 | None:intergenic | 35.0% |
CATAGCAGTTCTTGTATTTG+GGG | + | chr7_1:79657756-79657775 | Msa1041980:intron | 35.0% | |
ATAGCAGTTCTTGTATTTGG+GGG | + | chr7_1:79657757-79657776 | Msa1041980:intron | 35.0% | |
TGCAAGCCTACAAAAAAGAT+TGG | + | chr7_1:79657786-79657805 | Msa1041980:intron | 35.0% | |
ATATTTGGGCCTCAAAATAC+CGG | - | chr7_1:79658026-79658045 | None:intergenic | 35.0% | |
TGAACCATATATGGTCTTCA+AGG | + | chr7_1:79658414-79658433 | Msa1041980:CDS | 35.0% | |
ATATATGGTACAGGGTTTGA+CGG | + | chr7_1:79658545-79658564 | Msa1041980:intron | 35.0% | |
AAACAACATAAATGGCAACC+CGG | + | chr7_1:79658721-79658740 | Msa1041980:intron | 35.0% | |
TTCAGATACACCAAATGGTA+AGG | - | chr7_1:79658814-79658833 | None:intergenic | 35.0% | |
! | GTTGTTTCAGATACACCAAA+TGG | - | chr7_1:79658819-79658838 | None:intergenic | 35.0% |
! | CACCAAAGTACTACAAACAA+AGG | + | chr7_1:79659017-79659036 | Msa1041980:intron | 35.0% |
GAAATGTGAAAAAGGCAAAG+CGG | + | chr7_1:79659141-79659160 | Msa1041980:intron | 35.0% | |
AAATGTGAAAAAGGCAAAGC+GGG | + | chr7_1:79659142-79659161 | Msa1041980:intron | 35.0% | |
TATTGGTCACAACTTCATGT+AGG | + | chr7_1:79659313-79659332 | Msa1041980:intron | 35.0% | |
TACGTGTCTTTCCATGTAAA+AGG | - | chr7_1:79659487-79659506 | None:intergenic | 35.0% | |
AAAACACCTCCACATATACA+AGG | + | chr7_1:79659592-79659611 | Msa1041980:CDS | 35.0% | |
!! | GCTTACGTAACATTTTAGCA+TGG | - | chr7_1:79659728-79659747 | None:intergenic | 35.0% |
GGTTTATCTTCATCCTCTAA+TGG | - | chr7_1:79659771-79659790 | None:intergenic | 35.0% | |
AGTAAGGATGAAGACAAAGA+TGG | - | chr7_1:79659911-79659930 | None:intergenic | 35.0% | |
GCTTCTTGATTCTCTCTAAT+GGG | - | chr7_1:79659998-79660017 | None:intergenic | 35.0% | |
AGCTTCTTGATTCTCTCTAA+TGG | - | chr7_1:79659999-79660018 | None:intergenic | 35.0% | |
! | GTTGCATGATGATGAAAATG+AGG | + | chr7_1:79660051-79660070 | Msa1041980:CDS | 35.0% |
!!! | TATTTTGGTACGTATAGGAG+CGG | + | chr7_1:79660178-79660197 | Msa1041980:intron | 35.0% |
AAAACGAATTCAGGAAGCAA+TGG | + | chr7_1:79660230-79660249 | Msa1041980:CDS | 35.0% | |
AAATTATCTTCAGATGGAGC+TGG | - | chr7_1:79660264-79660283 | None:intergenic | 35.0% | |
!! | GTTGAAAGCCTTTAAAGCTA+TGG | + | chr7_1:79660287-79660306 | Msa1041980:CDS | 35.0% |
TTCGGAGAAGTTATAAGTTG+TGG | + | chr7_1:79660466-79660485 | Msa1041980:intron | 35.0% | |
GTTGTGGATAAGTATCATAG+AGG | + | chr7_1:79660482-79660501 | Msa1041980:intron | 35.0% | |
ATTCTGGTAAATATTGGAGC+AGG | + | chr7_1:79660687-79660706 | Msa1041980:intron | 35.0% | |
! | TTGAAATACTTTGGCTTCCT+TGG | - | chr7_1:79660739-79660758 | None:intergenic | 35.0% |
TGAACACGGTTGAAATACTT+TGG | - | chr7_1:79660748-79660767 | None:intergenic | 35.0% | |
TTTCTCTATAGTGTAGTTCG+GGG | - | chr7_1:79660893-79660912 | None:intergenic | 35.0% | |
CTTTCTCTATAGTGTAGTTC+GGG | - | chr7_1:79660894-79660913 | None:intergenic | 35.0% | |
TGCATTATTAGATTCCATGC+AGG | + | chr7_1:79660934-79660953 | Msa1041980:CDS | 35.0% | |
TCCGCATTGTAAACAAAGAA+TGG | + | chr7_1:79661081-79661100 | Msa1041980:CDS | 35.0% | |
! | CCCATTCTTTGTTTACAATG+CGG | - | chr7_1:79661085-79661104 | None:intergenic | 35.0% |
CCGCATTGTAAACAAAGAAT+GGG | + | chr7_1:79661082-79661101 | Msa1041980:CDS | 35.0% | |
TTTAAATGCACATTCGAACG+TGG | + | chr7_1:79661125-79661144 | Msa1041980:CDS | 35.0% | |
!!! | TAGCTTCTCCTTTTGATTTG+AGG | + | chr7_1:79661228-79661247 | Msa1041980:three_prime_UTR | 35.0% |
!!! | AGCTTCTCCTTTTGATTTGA+GGG | + | chr7_1:79661229-79661248 | Msa1041980:three_prime_UTR | 35.0% |
GTGGCCAAGATAAATTCTAA+AGG | + | chr7_1:79661332-79661351 | Msa1041980:three_prime_UTR | 35.0% | |
GTTAATTAGTGCATTCCGTA+TGG | + | chr7_1:79661436-79661455 | Msa1041980:three_prime_UTR | 35.0% | |
TCAGATTAACAACATCGCCA+AGG | + | chr7_1:79654989-79655008 | Msa1041980:five_prime_UTR | 40.0% | |
CAGATTAACAACATCGCCAA+GGG | + | chr7_1:79654990-79655009 | Msa1041980:five_prime_UTR | 40.0% | |
CATTGTTTAACCCTAACCCT+TGG | - | chr7_1:79655009-79655028 | None:intergenic | 40.0% | |
CAAGGGTTAGGGTTAAACAA+TGG | + | chr7_1:79655007-79655026 | Msa1041980:exon | 40.0% | |
GACGACAACGATAATAGAAC+TGG | + | chr7_1:79655158-79655177 | Msa1041980:CDS | 40.0% | |
TTCCAGAACAATCACAGAAG+AGG | + | chr7_1:79655196-79655215 | Msa1041980:CDS | 40.0% | |
TTCCTCTTCTGTGATTGTTC+TGG | - | chr7_1:79655201-79655220 | None:intergenic | 40.0% | |
GGCTAAAAAAGCTCAGAGAA+AGG | + | chr7_1:79655235-79655254 | Msa1041980:CDS | 40.0% | |
CAGCAGTATGATTAGTAGAG+TGG | - | chr7_1:79656155-79656174 | None:intergenic | 40.0% | |
CACTCTACTAATCATACTGC+TGG | + | chr7_1:79656153-79656172 | Msa1041980:intron | 40.0% | |
ACACTCGTTCTTTAAACCTC+AGG | + | chr7_1:79656179-79656198 | Msa1041980:intron | 40.0% | |
TTCTAACCCCCTCAAGATTT+GGG | + | chr7_1:79656304-79656323 | Msa1041980:intron | 40.0% | |
CCTTCCCCATGAAATATACA+TGG | - | chr7_1:79656497-79656516 | None:intergenic | 40.0% | |
CCATGTATATTTCATGGGGA+AGG | + | chr7_1:79656494-79656513 | Msa1041980:intron | 40.0% | |
TGTAGTACGTGTTAGGTACT+TGG | + | chr7_1:79656858-79656877 | Msa1041980:intron | 40.0% | |
GTTCCTATTAATGTTGCCTC+TGG | + | chr7_1:79656895-79656914 | Msa1041980:intron | 40.0% | |
!! | GTCCTGTGATTTGTTGCTAA+TGG | + | chr7_1:79657279-79657298 | Msa1041980:intron | 40.0% |
GCAACGAACATTTAGTTGTC+AGG | - | chr7_1:79657305-79657324 | None:intergenic | 40.0% | |
AAAGGTGAAAAAGAGGAGAG+AGG | + | chr7_1:79657360-79657379 | Msa1041980:CDS | 40.0% | |
TGAAAAAGAGGAGAGAGGAA+AGG | + | chr7_1:79657365-79657384 | Msa1041980:CDS | 40.0% | |
GAAAAAGAGGAGAGAGGAAA+GGG | + | chr7_1:79657366-79657385 | Msa1041980:CDS | 40.0% | |
!! | ATTAGTCTTAGCTGTCCTAG+TGG | + | chr7_1:79657493-79657512 | Msa1041980:intron | 40.0% |
GAAAGTCTTCTATCTAGCGA+AGG | + | chr7_1:79657682-79657701 | Msa1041980:intron | 40.0% | |
TAGCAGTTCTTGTATTTGGG+GGG | + | chr7_1:79657758-79657777 | Msa1041980:intron | 40.0% | |
GAAAGTCTTCTATCTAGCGA+AGG | + | chr7_1:79657682-79657701 | Msa1041980:intron | 40.0% | |
! | TTCAACTTCCCGGTATTTTG+AGG | + | chr7_1:79658014-79658033 | Msa1041980:intron | 40.0% |
TATTTGGGCCTCAAAATACC+GGG | - | chr7_1:79658025-79658044 | None:intergenic | 40.0% | |
TCAGAGATTAGATTGCGTGA+AGG | + | chr7_1:79658322-79658341 | Msa1041980:CDS | 40.0% | |
CAGAGATTAGATTGCGTGAA+GGG | + | chr7_1:79658323-79658342 | Msa1041980:CDS | 40.0% | |
TGCTTGGTTAGGACATCAAT+TGG | - | chr7_1:79658358-79658377 | None:intergenic | 40.0% | |
!! | TCTCAATGGCTCTGATGATT+TGG | + | chr7_1:79658378-79658397 | Msa1041980:CDS | 40.0% |
TGACGACATCAAAATGCATC+TGG | + | chr7_1:79658590-79658609 | Msa1041980:CDS | 40.0% | |
AAATGCATCTGGATCTTGAC+AGG | + | chr7_1:79658601-79658620 | Msa1041980:CDS | 40.0% | |
AATGCATCTGGATCTTGACA+GGG | + | chr7_1:79658602-79658621 | Msa1041980:CDS | 40.0% | |
ACCAACCCATGTGGAATATT+GGG | + | chr7_1:79658629-79658648 | Msa1041980:CDS | 40.0% | |
TACCTCCCAATATTCCACAT+GGG | - | chr7_1:79658637-79658656 | None:intergenic | 40.0% | |
ATACCTCCCAATATTCCACA+TGG | - | chr7_1:79658638-79658657 | None:intergenic | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr7_1:79658788-79658807 | None:intergenic | 40.0% | |
TGCTTATATTTAGGGACGGA+GGG | - | chr7_1:79658867-79658886 | None:intergenic | 40.0% | |
!! | GCAAAGCGGGCTTTTATATA+GGG | + | chr7_1:79659155-79659174 | Msa1041980:intron | 40.0% |
TGCAACACATTTGGCCATTA+TGG | + | chr7_1:79659259-79659278 | Msa1041980:intron | 40.0% | |
ACACATTTGGCCATTATGGT+CGG | + | chr7_1:79659263-79659282 | Msa1041980:intron | 40.0% | |
GCTAGCTGAATCTCGAAAAA+AGG | + | chr7_1:79659361-79659380 | Msa1041980:CDS | 40.0% | |
TGTAAAAGGTCCTTCACATC+TGG | - | chr7_1:79659473-79659492 | None:intergenic | 40.0% | |
! | GATGTGAAGGACCTTTTACA+TGG | + | chr7_1:79659473-79659492 | Msa1041980:CDS | 40.0% |
!! | ATACCTTGGCCTTGTATATG+TGG | - | chr7_1:79659604-79659623 | None:intergenic | 40.0% |
CATCCTTACTGAAATGTGCT+TGG | + | chr7_1:79659921-79659940 | Msa1041980:intron | 40.0% | |
ACACCAAGCACATTTCAGTA+AGG | - | chr7_1:79659927-79659946 | None:intergenic | 40.0% | |
!! | ATGTGCTTGGTGTTTCTCTA+TGG | + | chr7_1:79659934-79659953 | Msa1041980:intron | 40.0% |
GAATCAAGAAGCTGAAGATG+AGG | + | chr7_1:79660006-79660025 | Msa1041980:CDS | 40.0% | |
TCATCATCATGCAACAGTTG+TGG | - | chr7_1:79660046-79660065 | None:intergenic | 40.0% | |
!! | AGTATAGCTTTGTCCTCTTC+AGG | - | chr7_1:79660088-79660107 | None:intergenic | 40.0% |
TGAAGAGGACAAAGCTATAC+TGG | + | chr7_1:79660087-79660106 | Msa1041980:CDS | 40.0% | |
AGAGCAGCAAAAACGAATTC+AGG | + | chr7_1:79660221-79660240 | Msa1041980:CDS | 40.0% | |
GAAACAATACCTGTGAATCG+AGG | - | chr7_1:79660362-79660381 | None:intergenic | 40.0% | |
!! | CCAACTTTTAAGGAGGAAAG+AGG | - | chr7_1:79660560-79660579 | None:intergenic | 40.0% |
CCTCTTTCCTCCTTAAAAGT+TGG | + | chr7_1:79660557-79660576 | Msa1041980:intron | 40.0% | |
!! | TCTAGTGCCAACTTTTAAGG+AGG | - | chr7_1:79660567-79660586 | None:intergenic | 40.0% |
! | GCATCTAGTGCCAACTTTTA+AGG | - | chr7_1:79660570-79660589 | None:intergenic | 40.0% |
TATTGGAGCAGGTTTATTGG+TGG | + | chr7_1:79660698-79660717 | Msa1041980:intron | 40.0% | |
TATTTCAACCGTGTTCACAC+CGG | + | chr7_1:79660751-79660770 | Msa1041980:CDS | 40.0% | |
TGTCATGATCATAGTGAGTC+TGG | - | chr7_1:79660798-79660817 | None:intergenic | 40.0% | |
TTGTACCCTTGCACAATCTT+TGG | - | chr7_1:79660829-79660848 | None:intergenic | 40.0% | |
TACACTATAGAGAAAGACGG+CGG | + | chr7_1:79660898-79660917 | Msa1041980:CDS | 40.0% | |
TAGTTAGTGTGTTATGTCGG+TGG | - | chr7_1:79661005-79661024 | None:intergenic | 40.0% | |
TGGGAATACTCTCACAAGAA+AGG | + | chr7_1:79661101-79661120 | Msa1041980:CDS | 40.0% | |
TATGAAATTATCGGCGGTAG+CGG | - | chr7_1:79661184-79661203 | None:intergenic | 40.0% | |
ACCGCCGATAATTTCATATC+AGG | + | chr7_1:79661186-79661205 | Msa1041980:exon | 40.0% | |
GCCTGATATGAAATTATCGG+CGG | - | chr7_1:79661190-79661209 | None:intergenic | 40.0% | |
ACAGCTTCCCTCAAATCAAA+AGG | - | chr7_1:79661239-79661258 | None:intergenic | 40.0% | |
! | TTCTAGGAAGGAACACCATA+CGG | - | chr7_1:79661454-79661473 | None:intergenic | 40.0% |
ACTCGATAAGAATCTCGAGA+TGG | + | chr7_1:79661477-79661496 | Msa1041980:three_prime_UTR | 40.0% | |
CTCGATAAGAATCTCGAGAT+GGG | + | chr7_1:79661478-79661497 | Msa1041980:three_prime_UTR | 40.0% | |
TCAATCGAATTTCCCCACAC+AGG | - | chr7_1:79654967-79654986 | None:intergenic | 45.0% | |
TAACAACATCGCCAAGGGTT+AGG | + | chr7_1:79654995-79655014 | Msa1041980:five_prime_UTR | 45.0% | |
AACAACATCGCCAAGGGTTA+GGG | + | chr7_1:79654996-79655015 | Msa1041980:five_prime_UTR | 45.0% | |
TAGGGTTAAACAATGGCGAG+CGG | + | chr7_1:79655014-79655033 | Msa1041980:exon | 45.0% | |
GTCAGATGCAGAGTCATCAT+CGG | - | chr7_1:79655072-79655091 | None:intergenic | 45.0% | |
ATTGAGCGCGATGTTACTCA+AGG | + | chr7_1:79655625-79655644 | Msa1041980:CDS | 45.0% | |
CAACAGACCTAAACCCTGTT+TGG | - | chr7_1:79656100-79656119 | None:intergenic | 45.0% | |
CAAACAGGGTTTAGGTCTGT+TGG | + | chr7_1:79656098-79656117 | Msa1041980:intron | 45.0% | |
TTACATGGGACATGTTCCTG+AGG | - | chr7_1:79656198-79656217 | None:intergenic | 45.0% | |
CTTCTAACCCCCTCAAGATT+TGG | + | chr7_1:79656303-79656322 | Msa1041980:intron | 45.0% | |
CGTTAGGACATGACAATGGT+TGG | + | chr7_1:79656548-79656567 | Msa1041980:intron | 45.0% | |
TAGGACATGACAATGGTTGG+TGG | + | chr7_1:79656551-79656570 | Msa1041980:intron | 45.0% | |
AGGACATGACAATGGTTGGT+GGG | + | chr7_1:79656552-79656571 | Msa1041980:intron | 45.0% | |
TTCATTGGAGATGGTTGGGT+TGG | + | chr7_1:79657137-79657156 | Msa1041980:intron | 45.0% | |
TCATTGGAGATGGTTGGGTT+GGG | + | chr7_1:79657138-79657157 | Msa1041980:intron | 45.0% | |
GGCCATTAGCAACAAATCAC+AGG | - | chr7_1:79657284-79657303 | None:intergenic | 45.0% | |
CATAGTAACACACTGCCACT+AGG | - | chr7_1:79657511-79657530 | None:intergenic | 45.0% | |
GGAAGTTGAATTATAGCCCG+TGG | - | chr7_1:79658004-79658023 | None:intergenic | 45.0% | |
CGGGCTATAATTCAACTTCC+CGG | + | chr7_1:79658004-79658023 | Msa1041980:intron | 45.0% | |
GTTCTCTAGCTAACAATGCC+TGG | - | chr7_1:79658148-79658167 | None:intergenic | 45.0% | |
GTTCCAGGACTGGGAAAAAA+AGG | + | chr7_1:79658181-79658200 | Msa1041980:CDS | 45.0% | |
!!! | CTTCCTTTTTTTCCCAGTCC+TGG | - | chr7_1:79658187-79658206 | None:intergenic | 45.0% |
GGACTGGGAAAAAAAGGAAG+AGG | + | chr7_1:79658187-79658206 | Msa1041980:CDS | 45.0% | |
CTGGGAAAAAAAGGAAGAGG+AGG | + | chr7_1:79658190-79658209 | Msa1041980:CDS | 45.0% | |
GTCCTAACCAAGCATCTCAA+TGG | + | chr7_1:79658364-79658383 | Msa1041980:CDS | 45.0% | |
AGCCATTGAGATGCTTGGTT+AGG | - | chr7_1:79658369-79658388 | None:intergenic | 45.0% | |
ATCAGAGCCATTGAGATGCT+TGG | - | chr7_1:79658374-79658393 | None:intergenic | 45.0% | |
CACCAACCCATGTGGAATAT+TGG | + | chr7_1:79658628-79658647 | Msa1041980:CDS | 45.0% | |
TCCCAATATTCCACATGGGT+TGG | - | chr7_1:79658633-79658652 | None:intergenic | 45.0% | |
AACCCATGTGGAATATTGGG+AGG | + | chr7_1:79658632-79658651 | Msa1041980:CDS | 45.0% | |
CATGTGCAGAGCTCAAACAA+GGG | - | chr7_1:79658671-79658690 | None:intergenic | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | chr7_1:79658789-79658808 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | chr7_1:79658792-79658811 | None:intergenic | 45.0% | |
TTGTACGCAGCCTTACCATT+TGG | + | chr7_1:79658801-79658820 | Msa1041980:intron | 45.0% | |
GTGCTTATATTTAGGGACGG+AGG | - | chr7_1:79658868-79658887 | None:intergenic | 45.0% | |
!! | GGCAAAGCGGGCTTTTATAT+AGG | + | chr7_1:79659154-79659173 | Msa1041980:intron | 45.0% |
!! | AGCGGGCTTTTATATAGGGA+CGG | + | chr7_1:79659159-79659178 | Msa1041980:intron | 45.0% |
! | GGCTTTTATATAGGGACGGA+GGG | + | chr7_1:79659163-79659182 | Msa1041980:intron | 45.0% |
TCTCCTTGTGGTGTGTGATT+GGG | + | chr7_1:79659337-79659356 | Msa1041980:CDS | 45.0% | |
AGGATGCAATTGATCGAGCT+AGG | + | chr7_1:79659381-79659400 | Msa1041980:CDS | 45.0% | |
GGATGCAATTGATCGAGCTA+GGG | + | chr7_1:79659382-79659401 | Msa1041980:CDS | 45.0% | |
! | TGAGCTGCTTGCTGAACAAA+GGG | + | chr7_1:79659427-79659446 | Msa1041980:CDS | 45.0% |
TGGAAAGACACGTACAGAGT+TGG | + | chr7_1:79659493-79659512 | Msa1041980:CDS | 45.0% | |
TACAGAGTTGGAAGCCTTAC+AGG | + | chr7_1:79659505-79659524 | Msa1041980:CDS | 45.0% | |
TGACTCAATGTGAGCCTGTA+AGG | - | chr7_1:79659522-79659541 | None:intergenic | 45.0% | |
ATTGAGTCAGAGATGCGTAC+TGG | + | chr7_1:79659533-79659552 | Msa1041980:CDS | 45.0% | |
AGCAAAGGTGGTTGAGTACT+GGG | + | chr7_1:79659559-79659578 | Msa1041980:CDS | 45.0% | |
ACGTCTTGAGCAACCATTAG+AGG | + | chr7_1:79659755-79659774 | Msa1041980:CDS | 45.0% | |
TGCTCTTGACATGATACCTG+AGG | + | chr7_1:79659797-79659816 | Msa1041980:CDS | 45.0% | |
TCTTGACATGATACCTGAGG+AGG | + | chr7_1:79659800-79659819 | Msa1041980:CDS | 45.0% | |
ATATACTGAGGAGGATGAGG+AGG | + | chr7_1:79659824-79659843 | Msa1041980:CDS | 45.0% | |
!! | TGATTCTCTCTAATGGGCTC+TGG | - | chr7_1:79659992-79660011 | None:intergenic | 45.0% |
GGAAGCTATTGATCCTGAAG+AGG | + | chr7_1:79660072-79660091 | Msa1041980:CDS | 45.0% | |
!! | CATGGCTCCCATAGCTTTAA+AGG | - | chr7_1:79660298-79660317 | None:intergenic | 45.0% |
!! | CTTTAAAGCTATGGGAGCCA+TGG | + | chr7_1:79660296-79660315 | Msa1041980:CDS | 45.0% |
ACTCATATCCGGTGTGAACA+CGG | - | chr7_1:79660762-79660781 | None:intergenic | 45.0% | |
! | CTTGCACAATCTTTGGAGGT+GGG | - | chr7_1:79660822-79660841 | None:intergenic | 45.0% |
CACCTCCAAAGATTGTGCAA+GGG | + | chr7_1:79660821-79660840 | Msa1041980:CDS | 45.0% | |
TACCCTTGCACAATCTTTGG+AGG | - | chr7_1:79660826-79660845 | None:intergenic | 45.0% | |
TTCCTTGTGTCTTCCATGAC+AGG | + | chr7_1:79661055-79661074 | Msa1041980:intron | 45.0% | |
TGATACCTAGGGATGACGAT+AGG | + | chr7_1:79661514-79661533 | Msa1041980:three_prime_UTR | 45.0% | |
GATACCTAGGGATGACGATA+GGG | + | chr7_1:79661515-79661534 | Msa1041980:three_prime_UTR | 45.0% | |
!! | AAAAATTCAAATTATATATA+TGG | - | chr7_1:79660389-79660408 | None:intergenic | 5.0% |
!!! | TAATTTATTTTTATATTTGA+AGG | + | chr7_1:79660607-79660626 | Msa1041980:intron | 5.0% |
!! | CATGACAATGGTTGGTGGGT+CGG | + | chr7_1:79656556-79656575 | Msa1041980:intron | 50.0% |
! | ATGTTGCCTCTGGTTTCGAC+TGG | + | chr7_1:79656905-79656924 | Msa1041980:intron | 50.0% |
TGTACACCAGTCGAAACCAG+AGG | - | chr7_1:79656914-79656933 | None:intergenic | 50.0% | |
! | CATTGGAGATGGTTGGGTTG+GGG | + | chr7_1:79657139-79657158 | Msa1041980:intron | 50.0% |
GGTTAGGACATCAATTGGCC+TGG | - | chr7_1:79658353-79658372 | None:intergenic | 50.0% | |
GCATGTGCAGAGCTCAAACA+AGG | - | chr7_1:79658672-79658691 | None:intergenic | 50.0% | |
! | GGGCTTTTATATAGGGACGG+AGG | + | chr7_1:79659162-79659181 | Msa1041980:intron | 50.0% |
!! | GAAGAAGGTGCCGACCATAA+TGG | - | chr7_1:79659276-79659295 | None:intergenic | 50.0% |
CTTCATGTAGGCTCTCCTTG+TGG | + | chr7_1:79659325-79659344 | Msa1041980:intron | 50.0% | |
CTCTCCTTGTGGTGTGTGAT+TGG | + | chr7_1:79659336-79659355 | Msa1041980:CDS | 50.0% | |
! | CTGAGCTGCTTGCTGAACAA+AGG | + | chr7_1:79659426-79659445 | Msa1041980:CDS | 50.0% |
! | GAGCTGCTTGCTGAACAAAG+GGG | + | chr7_1:79659428-79659447 | Msa1041980:CDS | 50.0% |
! | CTTCACATCTGGCTCAACAC+TGG | - | chr7_1:79659462-79659481 | None:intergenic | 50.0% |
! | CAGTGTTGAGCCAGATGTGA+AGG | + | chr7_1:79659460-79659479 | Msa1041980:CDS | 50.0% |
! | GATGCGTACTGGTACAGCAA+AGG | + | chr7_1:79659544-79659563 | Msa1041980:CDS | 50.0% |
CAGCAAAGGTGGTTGAGTAC+TGG | + | chr7_1:79659558-79659577 | Msa1041980:CDS | 50.0% | |
!! | AAAGGTGGTTGAGTACTGGG+AGG | + | chr7_1:79659562-79659581 | Msa1041980:CDS | 50.0% |
!! | CCTTGGCCTTGTATATGTGG+AGG | - | chr7_1:79659601-79659620 | None:intergenic | 50.0% |
CCTCCACATATACAAGGCCA+AGG | + | chr7_1:79659598-79659617 | Msa1041980:CDS | 50.0% | |
! | ATCATGTCAAGAGCACGCTC+CGG | - | chr7_1:79659792-79659811 | None:intergenic | 50.0% |
! | ACCTGAGGAGGCATATACTG+AGG | + | chr7_1:79659812-79659831 | Msa1041980:CDS | 50.0% |
TCCTCAGTATATGCCTCCTC+AGG | - | chr7_1:79659816-79659835 | None:intergenic | 50.0% | |
! | TGAGGAGGCATATACTGAGG+AGG | + | chr7_1:79659815-79659834 | Msa1041980:CDS | 50.0% |
GGCATATACTGAGGAGGATG+AGG | + | chr7_1:79659821-79659840 | Msa1041980:CDS | 50.0% | |
GATGAGGAGGAGGATGCTAA+AGG | + | chr7_1:79659837-79659856 | Msa1041980:CDS | 50.0% | |
CAAGAAGCTGAAGATGAGGC+TGG | + | chr7_1:79660010-79660029 | Msa1041980:CDS | 50.0% | |
CGTATAGGAGCGGAAACGTA+TGG | + | chr7_1:79660188-79660207 | Msa1041980:intron | 50.0% | |
GCGGAAACGTATGGCTGTAA+TGG | + | chr7_1:79660197-79660216 | Msa1041980:CDS | 50.0% | |
TAAAGCTATGGGAGCCATGG+AGG | + | chr7_1:79660299-79660318 | Msa1041980:CDS | 50.0% | |
TGAAGTGAGCCTCGATTCAC+AGG | + | chr7_1:79660350-79660369 | Msa1041980:CDS | 50.0% | |
GGCATGACAAGTACAGACCA+AGG | + | chr7_1:79660719-79660738 | Msa1041980:CDS | 50.0% | |
GTGTTCACACCGGATATGAG+TGG | + | chr7_1:79660761-79660780 | Msa1041980:CDS | 50.0% | |
! | CCTTGCACAATCTTTGGAGG+TGG | - | chr7_1:79660823-79660842 | None:intergenic | 50.0% |
CCACCTCCAAAGATTGTGCA+AGG | + | chr7_1:79660820-79660839 | Msa1041980:CDS | 50.0% | |
ATAGAGAAAGACGGCGGCAA+TGG | + | chr7_1:79660904-79660923 | Msa1041980:CDS | 50.0% | |
TAGAGAAAGACGGCGGCAAT+GGG | + | chr7_1:79660905-79660924 | Msa1041980:CDS | 50.0% | |
CTTCATATGGTGGTCCTGCA+TGG | - | chr7_1:79660951-79660970 | None:intergenic | 50.0% | |
AGCCTGTCATGGAAGACACA+AGG | - | chr7_1:79661060-79661079 | None:intergenic | 50.0% | |
ACAATGCGGAAAGCCTGTCA+TGG | - | chr7_1:79661071-79661090 | None:intergenic | 50.0% | |
AATCTCGAGATGGGTCTCTC+CGG | + | chr7_1:79661487-79661506 | Msa1041980:three_prime_UTR | 50.0% | |
!!! | ACTAGTTTTCCGGCGGTGGT+CGG | - | chr7_1:79655102-79655121 | None:intergenic | 55.0% |
!!! | GTGACCGGCGACTAGTTTTC+CGG | - | chr7_1:79655112-79655131 | None:intergenic | 55.0% |
CATCTGAATCTCGGCGTGAC+CGG | - | chr7_1:79655127-79655146 | None:intergenic | 55.0% | |
!! | AGATGGTTGGGTTGGGGATC+TGG | + | chr7_1:79657145-79657164 | Msa1041980:intron | 55.0% |
TCGAGCTGAGTTCCAGGACT+GGG | + | chr7_1:79658172-79658191 | Msa1041980:CDS | 55.0% | |
GCTCCCAATCACACACCACA+AGG | - | chr7_1:79659343-79659362 | None:intergenic | 55.0% | |
ATTGATCGAGCTAGGGTGCG+TGG | + | chr7_1:79659389-79659408 | Msa1041980:CDS | 55.0% | |
TGTTCAGCAAGCAGCTCAGC+AGG | - | chr7_1:79659425-79659444 | None:intergenic | 55.0% | |
! | GCGTACTGGTACAGCAAAGG+TGG | + | chr7_1:79659547-79659566 | Msa1041980:CDS | 55.0% |
TACTGAGGAGGATGAGGAGG+AGG | + | chr7_1:79659827-79659846 | Msa1041980:CDS | 55.0% | |
GAGGATGGAGACGCAGTGTT+TGG | + | chr7_1:79660318-79660337 | Msa1041980:CDS | 55.0% | |
GGAGACGCAGTGTTTGGATC+TGG | + | chr7_1:79660324-79660343 | Msa1041980:CDS | 55.0% | |
AGAGAAAGACGGCGGCAATG+GGG | + | chr7_1:79660906-79660925 | Msa1041980:CDS | 55.0% | |
! | GAAATTATCGGCGGTAGCGG+TGG | - | chr7_1:79661181-79661200 | None:intergenic | 55.0% |
TCTCCGGCGAGTGATACCTA+GGG | + | chr7_1:79661503-79661522 | Msa1041980:three_prime_UTR | 55.0% | |
CATCCCTAGGTATCACTCGC+CGG | - | chr7_1:79661509-79661528 | None:intergenic | 55.0% | |
CAGACCCTATCGTCATCCCT+AGG | - | chr7_1:79661522-79661541 | None:intergenic | 55.0% | |
ACCGCCGGAAAACTAGTCGC+CGG | + | chr7_1:79655105-79655124 | Msa1041980:CDS | 60.0% | |
!!! | ACCGGCGACTAGTTTTCCGG+CGG | - | chr7_1:79655109-79655128 | None:intergenic | 60.0% |
ACGTGCTCGAGCTGAGTTCC+AGG | + | chr7_1:79658166-79658185 | Msa1041980:CDS | 60.0% | |
CTCGAGCTGAGTTCCAGGAC+TGG | + | chr7_1:79658171-79658190 | Msa1041980:CDS | 60.0% | |
CAGGGCAACACCAACCCATG+TGG | + | chr7_1:79658620-79658639 | Msa1041980:CDS | 60.0% | |
! | ACGCGGGAGCTTTAGTGCAC+CGG | - | chr7_1:79658743-79658762 | None:intergenic | 60.0% |
ACTAAAGCTCCCGCGTACGC+AGG | + | chr7_1:79658747-79658766 | Msa1041980:intron | 60.0% | |
CTAAAGCTCCCGCGTACGCA+GGG | + | chr7_1:79658748-79658767 | Msa1041980:intron | 60.0% | |
! | AAATGGTGGGACCCCTTCCC+CGG | - | chr7_1:79658775-79658794 | None:intergenic | 60.0% |
TCAGCAAGCAGCTCAGCAGG+AGG | - | chr7_1:79659422-79659441 | None:intergenic | 60.0% | |
GCTATGGGAGCCATGGAGGA+TGG | + | chr7_1:79660303-79660322 | Msa1041980:CDS | 60.0% | |
CACTGCGTCTCCATCCTCCA+TGG | - | chr7_1:79660316-79660335 | None:intergenic | 60.0% | |
CTCTCCGGCGAGTGATACCT+AGG | + | chr7_1:79661502-79661521 | Msa1041980:three_prime_UTR | 60.0% | |
TTTCCGGCGGTGGTCGGAGT+CGG | - | chr7_1:79655096-79655115 | None:intergenic | 65.0% | |
!!! | GGCGACTAGTTTTCCGGCGG+TGG | - | chr7_1:79655106-79655125 | None:intergenic | 65.0% |
! | GATTGCGTGAAGGGCGTGCC+AGG | + | chr7_1:79658332-79658351 | Msa1041980:CDS | 65.0% |
! | CGCGGGAGCTTTAGTGCACC+GGG | - | chr7_1:79658742-79658761 | None:intergenic | 65.0% |
GGGGAAGGGGTCCCACCATT+TGG | + | chr7_1:79658774-79658793 | Msa1041980:intron | 65.0% | |
ACTCCGACTCCGACCACCGC+CGG | + | chr7_1:79655090-79655109 | Msa1041980:CDS | 70.0% | |
TTCCCCGGACCCTGCGTACG+CGG | - | chr7_1:79658760-79658779 | None:intergenic | 70.0% | |
CGTACGCAGGGTCCGGGGAA+GGG | + | chr7_1:79658760-79658779 | Msa1041980:intron | 70.0% | |
GTACGCAGGGTCCGGGGAAG+GGG | + | chr7_1:79658761-79658780 | Msa1041980:intron | 70.0% | |
GCTCCCGCGTACGCAGGGTC+CGG | + | chr7_1:79658753-79658772 | Msa1041980:intron | 75.0% | |
CTCCCGCGTACGCAGGGTCC+GGG | + | chr7_1:79658754-79658773 | Msa1041980:intron | 75.0% | |
TCCCGCGTACGCAGGGTCCG+GGG | + | chr7_1:79658755-79658774 | Msa1041980:intron | 75.0% | |
TCCCCGGACCCTGCGTACGC+GGG | - | chr7_1:79658759-79658778 | None:intergenic | 75.0% | |
GCGTACGCAGGGTCCGGGGA+AGG | + | chr7_1:79658759-79658778 | Msa1041980:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 79654941 | 79661643 | 79654941 | ID=Msa1041980;Name=Msa1041980 |
chr7_1 | mRNA | 79654941 | 79661643 | 79654941 | ID=Msa1041980-mRNA-1;Parent=Msa1041980;Name=Msa1041980-mRNA-1;_AED=0.04;_eAED=0.04;_QI=85|1|1|1|1|1|13|447|647 |
chr7_1 | exon | 79654941 | 79655256 | 79654941 | ID=Msa1041980-mRNA-1:exon:21531;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79655347 | 79655438 | 79655347 | ID=Msa1041980-mRNA-1:exon:21532;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79655606 | 79655705 | 79655606 | ID=Msa1041980-mRNA-1:exon:21533;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79657349 | 79657420 | 79657349 | ID=Msa1041980-mRNA-1:exon:21534;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79658149 | 79658211 | 79658149 | ID=Msa1041980-mRNA-1:exon:21535;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79658295 | 79658435 | 79658295 | ID=Msa1041980-mRNA-1:exon:21536;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79658558 | 79658653 | 79658558 | ID=Msa1041980-mRNA-1:exon:21537;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79659335 | 79659619 | 79659335 | ID=Msa1041980-mRNA-1:exon:21538;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79659708 | 79659858 | 79659708 | ID=Msa1041980-mRNA-1:exon:21539;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79659960 | 79660108 | 79659960 | ID=Msa1041980-mRNA-1:exon:21540;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79660195 | 79660371 | 79660195 | ID=Msa1041980-mRNA-1:exon:21541;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79660709 | 79660975 | 79660709 | ID=Msa1041980-mRNA-1:exon:21542;Parent=Msa1041980-mRNA-1 |
chr7_1 | exon | 79661077 | 79661643 | 79661077 | ID=Msa1041980-mRNA-1:exon:21543;Parent=Msa1041980-mRNA-1 |
chr7_1 | five_prime_UTR | 79654941 | 79655025 | 79654941 | ID=Msa1041980-mRNA-1:five_prime_utr;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79655026 | 79655256 | 79655026 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79655347 | 79655438 | 79655347 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79655606 | 79655705 | 79655606 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79657349 | 79657420 | 79657349 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79658149 | 79658211 | 79658149 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79658295 | 79658435 | 79658295 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79658558 | 79658653 | 79658558 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79659335 | 79659619 | 79659335 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79659708 | 79659858 | 79659708 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79659960 | 79660108 | 79659960 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79660195 | 79660371 | 79660195 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79660709 | 79660975 | 79660709 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | CDS | 79661077 | 79661196 | 79661077 | ID=Msa1041980-mRNA-1:cds;Parent=Msa1041980-mRNA-1 |
chr7_1 | three_prime_UTR | 79661197 | 79661643 | 79661197 | ID=Msa1041980-mRNA-1:three_prime_utr;Parent=Msa1041980-mRNA-1 |
Gene Sequence |
Protein sequence |