Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1167730 | XP_003625731.3 | 98.765 | 648 | 7 | 1 | 1 | 647 | 1 | 648 | 0.0 | 1316 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1167730 | sp|F4I2J8|CATIN_ARATH | 71.406 | 633 | 132 | 3 | 62 | 647 | 86 | 716 | 0.0 | 910 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1167730 | A0A396H713 | 98.765 | 648 | 7 | 1 | 1 | 647 | 1 | 648 | 0.0 | 1316 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1041980 | Msa1167730 | 0.978442 | 7.812424e-146 | -8.615850e-47 |
Msa1167680 | Msa1167730 | 0.995827 | 2.497615e-220 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1167730 | MtrunA17_Chr7g0265361 | 98.765 | 648 | 7 | 1 | 1 | 647 | 1 | 648 | 0.0 | 1316 |
Msa1167730 | MtrunA17_Chr1g0179691 | 78.884 | 663 | 113 | 4 | 6 | 647 | 2 | 658 | 0.0 | 1025 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1167730 | AT1G03910.1 | 76.740 | 589 | 132 | 2 | 62 | 647 | 86 | 672 | 0.0 | 931 |
Msa1167730 | AT1G03910.2 | 71.406 | 633 | 132 | 3 | 62 | 647 | 86 | 716 | 0.0 | 910 |
Msa1167730 | AT2G36815.2 | 51.546 | 97 | 33 | 2 | 269 | 364 | 17 | 100 | 5.60e-21 | 88.6 |
Msa1167730 | AT2G36815.1 | 52.128 | 94 | 31 | 2 | 272 | 364 | 26 | 106 | 3.24e-20 | 86.7 |
Find 191 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGGCTCCCATAGCTTTAA+AGG | 0.146220 | 7_4:+60213219 | None:intergenic |
TGACTTTGCTTTGATCAAAA+TGG | 0.168302 | 7_4:+60215217 | None:intergenic |
AGCTTCTTGATTCTCTCTAA+TGG | 0.217152 | 7_4:+60213518 | None:intergenic |
CACCAACCCATGTGGAATAT+TGG | 0.248519 | 7_4:-60214886 | Msa1167730:CDS |
TCGTATGGATAATAACAAAA+AGG | 0.249074 | 7_4:-60211916 | Msa1167730:three_prime_UTR |
TCAAATATAGGCTTGTTTAA+AGG | 0.267285 | 7_4:-60213816 | Msa1167730:intron |
ATTCTTATCGAGTATATTCT+AGG | 0.269159 | 7_4:+60212047 | None:intergenic |
TTGTACCCTTGCACAATCTT+TGG | 0.280919 | 7_4:+60212688 | None:intergenic |
TTTACCTTGAAGACCATATA+TGG | 0.284103 | 7_4:+60215096 | None:intergenic |
CTCTCCTTGTGGTGTGTGAT+TGG | 0.286802 | 7_4:-60214178 | Msa1167730:CDS |
GCTTCTTGATTCTCTCTAAT+GGG | 0.293100 | 7_4:+60213519 | None:intergenic |
TACAGAGTTGGAAGCCTTAC+AGG | 0.297377 | 7_4:-60214009 | Msa1167730:CDS |
AAATATTGGAGCAGGTTTAT+TGG | 0.299548 | 7_4:-60212819 | Msa1167730:intron |
TTCCTCTTCTGTGATTGTTC+TGG | 0.304361 | 7_4:+60218310 | None:intergenic |
CTTTCTCTATAGTGTAGTTC+GGG | 0.307351 | 7_4:+60212623 | None:intergenic |
TCTCAATGGCTCTGATGATT+TGG | 0.310949 | 7_4:-60215136 | Msa1167730:CDS |
GGTTTATCTTCATCCTCTAA+TGG | 0.311251 | 7_4:+60213746 | None:intergenic |
TAACAACATCGCCAAGGGTT+AGG | 0.311822 | 7_4:-60218513 | Msa1167730:five_prime_UTR |
AGAAATAAATGAACCATATA+TGG | 0.332368 | 7_4:-60215109 | Msa1167730:CDS |
ACGTGCTCGAGCTGAGTTCC+AGG | 0.339829 | 7_4:-60215348 | Msa1167730:CDS |
TCCAATGATTCTAATCCATT+TGG | 0.349636 | 7_4:-60218116 | Msa1167730:CDS |
TTGAAATACTTTGGCTTCCT+TGG | 0.351127 | 7_4:+60212778 | None:intergenic |
TGCACTAATTAACTAGTATA+TGG | 0.353671 | 7_4:+60212088 | None:intergenic |
ACCGCCGATAATTTCATATC+AGG | 0.373562 | 7_4:-60212328 | Msa1167730:exon |
GAGGATGGAGACGCAGTGTT+TGG | 0.374545 | 7_4:-60213196 | Msa1167730:CDS |
CTTCTCAGCTTTAACAGAAA+AGG | 0.376850 | 7_4:+60217850 | None:intergenic |
ACCAAATGGATTAGAATCAT+TGG | 0.377470 | 7_4:+60218115 | None:intergenic |
TGAAGAGGACAAAGCTATAC+TGG | 0.377597 | 7_4:-60213427 | Msa1167730:intron |
TTTATCTTGTCTACAAGATC+AGG | 0.386955 | 7_4:+60212649 | None:intergenic |
ACCAACCCATGTGGAATATT+GGG | 0.388380 | 7_4:-60214885 | Msa1167730:CDS |
TCTTTCTCTATAGTGTAGTT+CGG | 0.388508 | 7_4:+60212622 | None:intergenic |
TGCTCCTTTAGAATTTATCT+TGG | 0.394381 | 7_4:+60212178 | None:intergenic |
AGTATAGCTTTGTCCTCTTC+AGG | 0.395081 | 7_4:+60213429 | None:intergenic |
ACGTCTTGAGCAACCATTAG+AGG | 0.398700 | 7_4:-60213759 | Msa1167730:CDS |
TGTTCAGCAAGCAGCTCAGC+AGG | 0.403673 | 7_4:+60214092 | None:intergenic |
TCCGCATTGTAAACAAAGAA+TGG | 0.405433 | 7_4:-60212433 | Msa1167730:CDS |
CAGCAAAGGTGGTTGAGTAC+TGG | 0.408832 | 7_4:-60213956 | Msa1167730:CDS |
TGACTCAATGTGAGCCTGTA+AGG | 0.412240 | 7_4:+60213995 | None:intergenic |
ATTGCCTGATATGAAATTAT+CGG | 0.423857 | 7_4:+60212324 | None:intergenic |
TACGTGTCTTTCCATGTAAA+AGG | 0.424095 | 7_4:+60214030 | None:intergenic |
TCTCCTTGTGGTGTGTGATT+GGG | 0.426562 | 7_4:-60214177 | Msa1167730:CDS |
CCTTGCACAATCTTTGGAGG+TGG | 0.426781 | 7_4:+60212694 | None:intergenic |
TTTAGATCAAATCACAATCA+TGG | 0.427509 | 7_4:+60212133 | None:intergenic |
GTTGAAAGCCTTTAAAGCTA+TGG | 0.428454 | 7_4:-60213227 | Msa1167730:CDS |
AGCACAACATGAAGAAGAAA+TGG | 0.434364 | 7_4:-60216113 | Msa1167730:intron |
TACCCTTGCACAATCTTTGG+AGG | 0.435278 | 7_4:+60212691 | None:intergenic |
TGTCATGATCATAGTGAGTC+TGG | 0.437642 | 7_4:+60212719 | None:intergenic |
TGATTCTCTCTAATGGGCTC+TGG | 0.438807 | 7_4:+60213525 | None:intergenic |
AGCAAAGGTGGTTGAGTACT+GGG | 0.442488 | 7_4:-60213955 | Msa1167730:CDS |
GAAAAGACAAGTAGAAAGGA+TGG | 0.442901 | 7_4:-60217828 | Msa1167730:intron |
AACAACATCGCCAAGGGTTA+GGG | 0.445137 | 7_4:-60218512 | Msa1167730:five_prime_UTR |
TAGAGAAAGACGGCGGCAAT+GGG | 0.445619 | 7_4:-60212609 | Msa1167730:CDS |
GATTGCGTGAAGGGCGTGCC+AGG | 0.446615 | 7_4:-60215182 | Msa1167730:CDS |
GACGACAACGATAATAGAAC+TGG | 0.446928 | 7_4:-60218350 | Msa1167730:CDS |
TGAACCATATATGGTCTTCA+AGG | 0.450157 | 7_4:-60215100 | Msa1167730:intron |
TGACGACATCAAAATGCATC+TGG | 0.451814 | 7_4:-60214924 | Msa1167730:CDS |
TGAACACGGTTGAAATACTT+TGG | 0.452374 | 7_4:+60212769 | None:intergenic |
AGACTTACTATATCTTCATA+TGG | 0.456635 | 7_4:+60212553 | None:intergenic |
TGCTTGGTTAGGACATCAAT+TGG | 0.460472 | 7_4:+60215159 | None:intergenic |
AAATGCATCTGGATCTTGAC+AGG | 0.460556 | 7_4:-60214913 | Msa1167730:CDS |
ATATTTGTTCCACTCATATC+CGG | 0.462283 | 7_4:+60212744 | None:intergenic |
GGAGACGCAGTGTTTGGATC+TGG | 0.464689 | 7_4:-60213190 | Msa1167730:CDS |
CCGCATTGTAAACAAAGAAT+GGG | 0.467266 | 7_4:-60212432 | Msa1167730:CDS |
AGAATTATTGCATATTCGTA+TGG | 0.468144 | 7_4:-60211931 | Msa1167730:three_prime_UTR |
TGTAAAAGGTCCTTCACATC+TGG | 0.469963 | 7_4:+60214044 | None:intergenic |
ATTAGAGGATGAAGATAAAC+CGG | 0.473687 | 7_4:-60213744 | Msa1167730:CDS |
ATCAGAGCCATTGAGATGCT+TGG | 0.474442 | 7_4:+60215143 | None:intergenic |
GGCATATACTGAGGAGGATG+AGG | 0.476259 | 7_4:-60213693 | Msa1167730:CDS |
TACTGAGGAGGATGAGGAGG+AGG | 0.476354 | 7_4:-60213687 | Msa1167730:CDS |
CATCTGAATCTCGGCGTGAC+CGG | 0.477601 | 7_4:+60218384 | None:intergenic |
AATCTCGAGATGGGTCTCTC+CGG | 0.478512 | 7_4:-60212027 | Msa1167730:three_prime_UTR |
AACTCTAAATTATCTTCAGA+TGG | 0.479290 | 7_4:+60213247 | None:intergenic |
TGAGCTGCTTGCTGAACAAA+GGG | 0.483674 | 7_4:-60214087 | Msa1167730:CDS |
GCGGAAACGTATGGCTGTAA+TGG | 0.488174 | 7_4:-60213317 | Msa1167730:CDS |
TTGAGATTAGTATCACCAAA+TGG | 0.494079 | 7_4:+60218101 | None:intergenic |
ACTTATAATAAAACCTGTGT+GGG | 0.494617 | 7_4:-60218557 | Msa1167730:five_prime_UTR |
ATACCTTGGCCTTGTATATG+TGG | 0.497718 | 7_4:+60213913 | None:intergenic |
ACAGCTTCCCTCAAATCAAA+AGG | 0.499844 | 7_4:+60212278 | None:intergenic |
TTGAAGACGAATACAGTATC+GGG | 0.502893 | 7_4:-60218143 | Msa1167730:CDS |
CTTGCACAATCTTTGGAGGT+GGG | 0.503952 | 7_4:+60212695 | None:intergenic |
TTTCCGGCGGTGGTCGGAGT+CGG | 0.504138 | 7_4:+60218415 | None:intergenic |
AAATTATCTTCAGATGGAGC+TGG | 0.504991 | 7_4:+60213253 | None:intergenic |
AGAAGAAAAGACAAGTAGAA+AGG | 0.506412 | 7_4:-60217832 | Msa1167730:CDS |
ATATATGGTACAGGGTTTGA+CGG | 0.508336 | 7_4:-60214969 | Msa1167730:intron |
GATGAGGAGGAGGATGCTAA+AGG | 0.508964 | 7_4:-60213677 | Msa1167730:intron |
TTGAAAGCCTTTAAAGCTAT+GGG | 0.509092 | 7_4:-60213226 | Msa1167730:CDS |
TATGAAATTATCGGCGGTAG+CGG | 0.509701 | 7_4:+60212333 | None:intergenic |
GGTTAGGACATCAATTGGCC+TGG | 0.512323 | 7_4:+60215164 | None:intergenic |
AGCCATTGAGATGCTTGGTT+AGG | 0.515511 | 7_4:+60215148 | None:intergenic |
CTCTCCGGCGAGTGATACCT+AGG | 0.516411 | 7_4:-60212012 | Msa1167730:three_prime_UTR |
TGAAGTGAGCCTCGATTCAC+AGG | 0.516699 | 7_4:-60213164 | Msa1167730:intron |
TCCTCAGTATATGCCTCCTC+AGG | 0.516934 | 7_4:+60213701 | None:intergenic |
CAGAGATTAGATTGCGTGAA+GGG | 0.520377 | 7_4:-60215191 | Msa1167730:CDS |
TCGAGCTGAGTTCCAGGACT+GGG | 0.522136 | 7_4:-60215342 | Msa1167730:CDS |
CATTGTTTAACCCTAACCCT+TGG | 0.524297 | 7_4:+60218502 | None:intergenic |
CTCGAGCTGAGTTCCAGGAC+TGG | 0.526610 | 7_4:-60215343 | Msa1167730:CDS |
CTGAGCTGCTTGCTGAACAA+AGG | 0.528929 | 7_4:-60214088 | Msa1167730:CDS |
GCTATGGGAGCCATGGAGGA+TGG | 0.529591 | 7_4:-60213211 | Msa1167730:CDS |
GTCCTAACCAAGCATCTCAA+TGG | 0.529933 | 7_4:-60215150 | Msa1167730:CDS |
CTTCATATGGTGGTCCTGCA+TGG | 0.530669 | 7_4:+60212566 | None:intergenic |
GTTAATTAGTGCATTCCGTA+TGG | 0.531288 | 7_4:-60212078 | Msa1167730:three_prime_UTR |
TGGGAATACTCTCACAAGAA+AGG | 0.534055 | 7_4:-60212413 | Msa1167730:CDS |
AGGATGCAATTGATCGAGCT+AGG | 0.538391 | 7_4:-60214133 | Msa1167730:CDS |
GAAATTATCGGCGGTAGCGG+TGG | 0.538663 | 7_4:+60212336 | None:intergenic |
ATAGAGAAAGACGGCGGCAA+TGG | 0.539441 | 7_4:-60212610 | Msa1167730:CDS |
TTGAATCATCATCTGAATCT+CGG | 0.539509 | 7_4:+60218375 | None:intergenic |
CGTATAGGAGCGGAAACGTA+TGG | 0.539851 | 7_4:-60213326 | Msa1167730:intron |
CTTCACATCTGGCTCAACAC+TGG | 0.541181 | 7_4:+60214055 | None:intergenic |
AGAGGAAATTTCACAGTACA+TGG | 0.541595 | 7_4:-60218294 | Msa1167730:CDS |
GTGGCCAAGATAAATTCTAA+AGG | 0.547320 | 7_4:-60212182 | Msa1167730:three_prime_UTR |
ATTCCGACTCCGACCACCGC+CGG | 0.548012 | 7_4:-60218418 | Msa1167730:CDS |
ATTGAAGACGAATACAGTAT+CGG | 0.548388 | 7_4:-60218144 | Msa1167730:CDS |
TATTGGAGCAGGTTTATTGG+TGG | 0.548422 | 7_4:-60212816 | Msa1167730:intron |
CAAGAAGCTGAAGATGAGGC+TGG | 0.549453 | 7_4:-60213504 | Msa1167730:CDS |
AATACAGGCAGAAATTGAAA+AGG | 0.549731 | 7_4:-60216170 | Msa1167730:intron |
TTAGATCAAATCACAATCAT+GGG | 0.551398 | 7_4:+60212134 | None:intergenic |
TCATCATCATGCAACAGTTG+TGG | 0.553991 | 7_4:+60213471 | None:intergenic |
AAAACACCTCCACATATACA+AGG | 0.555906 | 7_4:-60213922 | Msa1167730:CDS |
TGGAAAGACACGTACAGAGT+TGG | 0.555932 | 7_4:-60214021 | Msa1167730:CDS |
TGATACCTAGGGATGACGAT+AGG | 0.558897 | 7_4:-60212000 | Msa1167730:three_prime_UTR |
TTCTAGGAAGGAACACCATA+CGG | 0.559392 | 7_4:+60212063 | None:intergenic |
TGCATTATTAGATTCCATGC+AGG | 0.559588 | 7_4:-60212580 | Msa1167730:CDS |
GAATCAAGAAGCTGAAGATG+AGG | 0.559806 | 7_4:-60213508 | Msa1167730:CDS |
CAGTGTTGAGCCAGATGTGA+AGG | 0.561664 | 7_4:-60214054 | Msa1167730:CDS |
GATAATTTCATATCAGGCAA+TGG | 0.562061 | 7_4:-60212322 | Msa1167730:exon |
TTCCAGAACAATCACAGAAG+AGG | 0.563012 | 7_4:-60218312 | Msa1167730:CDS |
ATTGAGTCAGAGATGCGTAC+TGG | 0.566781 | 7_4:-60213981 | Msa1167730:CDS |
CACTGCGTCTCCATCCTCCA+TGG | 0.573173 | 7_4:+60213201 | None:intergenic |
CAGATTAACAACATCGCCAA+GGG | 0.573344 | 7_4:-60218518 | Msa1167730:five_prime_UTR |
GATACCTAGGGATGACGATA+GGG | 0.575644 | 7_4:-60211999 | Msa1167730:three_prime_UTR |
AGATAAATTCTAAAGGAGCA+TGG | 0.580247 | 7_4:-60212175 | Msa1167730:three_prime_UTR |
TTATCGAGTATATTCTAGGA+AGG | 0.580417 | 7_4:+60212051 | None:intergenic |
ATCATGTCAAGAGCACGCTC+CGG | 0.581483 | 7_4:+60213725 | None:intergenic |
ACTCGATAAGAATCTCGAGA+TGG | 0.584204 | 7_4:-60212037 | Msa1167730:three_prime_UTR |
CTCGATAAGAATCTCGAGAT+GGG | 0.584469 | 7_4:-60212036 | Msa1167730:three_prime_UTR |
CCACCTCCAAAGATTGTGCA+AGG | 0.584490 | 7_4:-60212694 | Msa1167730:CDS |
GTTGCATGATGATGAAAATG+AGG | 0.585801 | 7_4:-60213463 | Msa1167730:CDS |
CATCCCTAGGTATCACTCGC+CGG | 0.586976 | 7_4:+60212008 | None:intergenic |
TCAGATTAACAACATCGCCA+AGG | 0.587348 | 7_4:-60218519 | Msa1167730:five_prime_UTR |
TCCCAATATTCCACATGGGT+TGG | 0.589582 | 7_4:+60214884 | None:intergenic |
CCCATTCTTTGTTTACAATG+CGG | 0.589870 | 7_4:+60212432 | None:intergenic |
CTTTAAAGCTATGGGAGCCA+TGG | 0.593812 | 7_4:-60213218 | Msa1167730:CDS |
ACTCATATCCGGTGTGAACA+CGG | 0.594826 | 7_4:+60212755 | None:intergenic |
ATTGATCGAGCTAGGGTGCG+TGG | 0.595446 | 7_4:-60214125 | Msa1167730:CDS |
AAAATCTACTGTTTGAAATG+TGG | 0.597918 | 7_4:-60212201 | Msa1167730:three_prime_UTR |
ATCAGATGCAGAGTCATCAT+CGG | 0.601881 | 7_4:+60218439 | None:intergenic |
AAAACGAATTCAGGAAGCAA+TGG | 0.607367 | 7_4:-60213284 | Msa1167730:CDS |
GGATGCAATTGATCGAGCTA+GGG | 0.616184 | 7_4:-60214132 | Msa1167730:CDS |
ATATACTGAGGAGGATGAGG+AGG | 0.617133 | 7_4:-60213690 | Msa1167730:CDS |
CACTTATAATAAAACCTGTG+TGG | 0.619395 | 7_4:-60218558 | Msa1167730:five_prime_UTR |
CTTCATGTAGGCTCTCCTTG+TGG | 0.620002 | 7_4:-60214189 | Msa1167730:intron |
TCAATCGAATTTCCCCACAC+AGG | 0.620333 | 7_4:+60218544 | None:intergenic |
GCTCCCAATCACACACCACA+AGG | 0.625505 | 7_4:+60214174 | None:intergenic |
TTTAAATGCACATTCGAACG+TGG | 0.625849 | 7_4:-60212389 | Msa1167730:CDS |
TAAAGCTATGGGAGCCATGG+AGG | 0.627137 | 7_4:-60213215 | Msa1167730:CDS |
GCGTACTGGTACAGCAAAGG+TGG | 0.627923 | 7_4:-60213967 | Msa1167730:CDS |
CTTACTATATCTTCATATGG+TGG | 0.634403 | 7_4:+60212556 | None:intergenic |
ACCGCCGGAAAACTAGTCGC+CGG | 0.636310 | 7_4:-60218403 | Msa1167730:CDS |
TCAGCAAGCAGCTCAGCAGG+AGG | 0.636929 | 7_4:+60214095 | None:intergenic |
GTGTTCACACCGGATATGAG+TGG | 0.640725 | 7_4:-60212753 | Msa1167730:CDS |
TCTCCGGCGAGTGATACCTA+GGG | 0.641290 | 7_4:-60212011 | Msa1167730:three_prime_UTR |
ATTGAGCGCGATGTTACTCA+AGG | 0.644189 | 7_4:-60217887 | Msa1167730:CDS |
GATGCGTACTGGTACAGCAA+AGG | 0.649100 | 7_4:-60213970 | Msa1167730:CDS |
TCAGAGATTAGATTGCGTGA+AGG | 0.649679 | 7_4:-60215192 | Msa1167730:CDS |
AAAATGATTCATCAGCAGAA+CGG | 0.650693 | 7_4:+60213550 | None:intergenic |
TATTTCAACCGTGTTCACAC+CGG | 0.650995 | 7_4:-60212763 | Msa1167730:CDS |
CCTCCACATATACAAGGCCA+AGG | 0.652292 | 7_4:-60213916 | Msa1167730:intron |
GGAAGCTATTGATCCTGAAG+AGG | 0.658125 | 7_4:-60213442 | Msa1167730:CDS |
AACCCATGTGGAATATTGGG+AGG | 0.659144 | 7_4:-60214882 | Msa1167730:intron |
TGCTCTTGACATGATACCTG+AGG | 0.662422 | 7_4:-60213717 | Msa1167730:CDS |
GCCTGATATGAAATTATCGG+CGG | 0.663501 | 7_4:+60212327 | None:intergenic |
ATACCTCCCAATATTCCACA+TGG | 0.666278 | 7_4:+60214879 | None:intergenic |
GAAACAATACCTGTGAATCG+AGG | 0.669091 | 7_4:+60213155 | None:intergenic |
AACTACACTATAGAGAAAGA+CGG | 0.678317 | 7_4:-60212619 | Msa1167730:CDS |
TGAGGAGGCATATACTGAGG+AGG | 0.678998 | 7_4:-60213699 | Msa1167730:CDS |
CAGGGCAACACCAACCCATG+TGG | 0.679640 | 7_4:-60214894 | Msa1167730:CDS |
CACCTCCAAAGATTGTGCAA+GGG | 0.681508 | 7_4:-60212693 | Msa1167730:CDS |
TCTTGACATGATACCTGAGG+AGG | 0.683745 | 7_4:-60213714 | Msa1167730:CDS |
TTTCTCTATAGTGTAGTTCG+GGG | 0.684958 | 7_4:+60212624 | None:intergenic |
GGCATGACAAGTACAGACCA+AGG | 0.685007 | 7_4:-60212795 | Msa1167730:CDS |
CTTATAATAAAACCTGTGTG+GGG | 0.685393 | 7_4:-60218556 | Msa1167730:five_prime_UTR |
AGAGAAAGACGGCGGCAATG+GGG | 0.685515 | 7_4:-60212608 | Msa1167730:CDS |
ACCTGAGGAGGCATATACTG+AGG | 0.687934 | 7_4:-60213702 | Msa1167730:CDS |
AATGCATCTGGATCTTGACA+GGG | 0.688800 | 7_4:-60214912 | Msa1167730:CDS |
CAAGGGTTAGGGTTAAACAA+TGG | 0.699057 | 7_4:-60218501 | Msa1167730:exon |
TAGGGTTAAACAATGGCGAG+CGG | 0.710396 | 7_4:-60218494 | Msa1167730:exon |
TACCTCCCAATATTCCACAT+GGG | 0.710728 | 7_4:+60214880 | None:intergenic |
CCTTGGCCTTGTATATGTGG+AGG | 0.714941 | 7_4:+60213916 | None:intergenic |
AAAGGTGGTTGAGTACTGGG+AGG | 0.739956 | 7_4:-60213952 | Msa1167730:CDS |
TACACTATAGAGAAAGACGG+CGG | 0.747701 | 7_4:-60212616 | Msa1167730:CDS |
GAGCTGCTTGCTGAACAAAG+GGG | 0.752410 | 7_4:-60214086 | Msa1167730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAATACAAATAATTAATT+CGG | + | chr7_4:60214069-60214088 | None:intergenic | 10.0% |
!! | AATTAATTATTTGTATTCAT+TGG | - | chr7_4:60214069-60214088 | Msa1167730:CDS | 10.0% |
!! | TTAATTAATGATTTGATATA+TGG | - | chr7_4:60215475-60215494 | Msa1167730:intron | 10.0% |
!!! | TGAGTATATAAATTATATTT+TGG | - | chr7_4:60217108-60217127 | Msa1167730:intron | 10.0% |
!!! | ATATATAATTTGAATTTTTC+TGG | - | chr7_4:60217335-60217354 | Msa1167730:intron | 10.0% |
!!! | GAAATAAGATTTTTTTTTAA+CGG | + | chr7_4:60217983-60218002 | None:intergenic | 10.0% |
!!! | TATGTTTTTTTTTTCTTCTA+TGG | - | chr7_4:60212388-60212407 | Msa1167730:CDS | 15.0% |
!! | TAAATATTTCAGATAAATAC+TGG | - | chr7_4:60212477-60212496 | Msa1167730:intron | 15.0% |
!! | AATCATATATATCTTCATAT+TGG | + | chr7_4:60212506-60212525 | None:intergenic | 15.0% |
!!! | ACCTAAAAAATGTTATTTTT+AGG | - | chr7_4:60212531-60212550 | Msa1167730:intron | 15.0% |
!!! | ACCTAAAAATAACATTTTTT+AGG | + | chr7_4:60212535-60212554 | None:intergenic | 15.0% |
!! | AAAAAAATAGAATTAACACT+AGG | - | chr7_4:60213070-60213089 | Msa1167730:intron | 15.0% |
!!! | AGTATTGAAATTTTTTCAAA+AGG | + | chr7_4:60213587-60213606 | None:intergenic | 15.0% |
!!! | AAAAGAAAATAACTTTTTGT+AGG | + | chr7_4:60214924-60214943 | None:intergenic | 15.0% |
!!! | TATTAATTTGCTTCAAATAT+AGG | - | chr7_4:60216631-60216650 | Msa1167730:intron | 15.0% |
!!! | TTTCTGATTTTTTTTTGTTC+AGG | - | chr7_4:60212273-60212292 | Msa1167730:three_prime_UTR | 20.0% |
!!! | ATGTTATTTTTAGGTTTGTT+TGG | - | chr7_4:60212540-60212559 | Msa1167730:intron | 20.0% |
!! | TCAATTGTTTGAATTTACAT+GGG | + | chr7_4:60213160-60213179 | None:intergenic | 20.0% |
!! | TAAAGTCAATCTCTTAAATT+TGG | + | chr7_4:60213343-60213362 | None:intergenic | 20.0% |
!!! | AAACAAGTTTTAAGAACAAT+CGG | - | chr7_4:60213694-60213713 | Msa1167730:CDS | 20.0% |
!! | TTGTTAGTTAATACGTATTA+TGG | - | chr7_4:60214390-60214409 | Msa1167730:intron | 20.0% |
!! | TGTTAGTTAATACGTATTAT+GGG | - | chr7_4:60214391-60214410 | Msa1167730:intron | 20.0% |
!! | TTAAACTAATATGTCAGATT+AGG | + | chr7_4:60214488-60214507 | None:intergenic | 20.0% |
!! | ATTATAACAGTTGAAACTTA+GGG | + | chr7_4:60214591-60214610 | None:intergenic | 20.0% |
!! | AATTATAACAGTTGAAACTT+AGG | + | chr7_4:60214592-60214611 | None:intergenic | 20.0% |
!! | ATTATAACAGTTGAAACTTA+GGG | + | chr7_4:60214591-60214610 | None:intergenic | 20.0% |
!! | AATTATAACAGTTGAAACTT+AGG | + | chr7_4:60214592-60214611 | None:intergenic | 20.0% |
!!! | AAGTTATTTTCTTTTAACCA+CGG | - | chr7_4:60214929-60214948 | Msa1167730:CDS | 20.0% |
!!! | CAAAAACTGTGTTATTTTAT+TGG | - | chr7_4:60215047-60215066 | Msa1167730:intron | 20.0% |
!! | AGAAATAAATGAACCATATA+TGG | - | chr7_4:60215350-60215369 | Msa1167730:CDS | 20.0% |
!!! | TCAAAAAGTGCTTATATTTA+GGG | + | chr7_4:60215820-60215839 | None:intergenic | 20.0% |
!! | TGTATAAGGGTTTATATTTA+TGG | + | chr7_4:60215856-60215875 | None:intergenic | 20.0% |
!! | AAGTTAGTAGTATTAATTAG+GGG | + | chr7_4:60215918-60215937 | None:intergenic | 20.0% |
!! | GAAGTTAGTAGTATTAATTA+GGG | + | chr7_4:60215919-60215938 | None:intergenic | 20.0% |
!! | AGAAGTTAGTAGTATTAATT+AGG | + | chr7_4:60215920-60215939 | None:intergenic | 20.0% |
!! | AATTAATACTACTAACTTCT+TGG | - | chr7_4:60215920-60215939 | Msa1167730:intron | 20.0% |
!! | TTTCTTAAGAAATGTGAAAA+AGG | - | chr7_4:60216078-60216097 | Msa1167730:intron | 20.0% |
!!! | AGTAAATATTTTAGTTGGAT+TGG | - | chr7_4:60216131-60216150 | Msa1167730:CDS | 20.0% |
!!! | TGAAAGTCATTTAGTTTTTT+TGG | + | chr7_4:60216160-60216179 | None:intergenic | 20.0% |
!! | AAAGCTTAGTTAAGATTTAT+TGG | - | chr7_4:60216241-60216260 | Msa1167730:intron | 20.0% |
!! | GCATTAGAACAAATATTTAA+AGG | + | chr7_4:60216609-60216628 | None:intergenic | 20.0% |
!!! | AAGGTATATACATTTTGTTT+CGG | - | chr7_4:60216801-60216820 | Msa1167730:intron | 20.0% |
!!! | GTTGTTCATTACTTTTTTAT+TGG | - | chr7_4:60216828-60216847 | Msa1167730:intron | 20.0% |
!! | TATACTCATAATAAAAGTAG+AGG | + | chr7_4:60217096-60217115 | None:intergenic | 20.0% |
!!! | AATTATATTTTGGTACGTAT+AGG | - | chr7_4:60217118-60217137 | Msa1167730:intron | 20.0% |
!! | AAAAATAGGATAGAATGATT+CGG | - | chr7_4:60217393-60217412 | Msa1167730:intron | 20.0% |
!! | TCAAAAACTTAAAAGTTGAA+AGG | + | chr7_4:60217610-60217629 | None:intergenic | 20.0% |
!!! | TTTTAAGTTTTTGACAATTC+TGG | - | chr7_4:60217616-60217635 | Msa1167730:intron | 20.0% |
!!! | ACACAGGTTTTATTATAAGT+GGG | + | chr7_4:60211902-60211921 | None:intergenic | 25.0% |
! | ACTTATAATAAAACCTGTGT+GGG | - | chr7_4:60211902-60211921 | Msa1167730:three_prime_UTR | 25.0% |
! | TGTTTATGTTTCTCCATATA+TGG | - | chr7_4:60212691-60212710 | Msa1167730:CDS | 25.0% |
! | TTAAGAGTTTCAAATTGAAG+CGG | - | chr7_4:60212728-60212747 | Msa1167730:CDS | 25.0% |
!! | TCTTTAAGCTTTAGCTTAAT+AGG | - | chr7_4:60212778-60212797 | Msa1167730:CDS | 25.0% |
! | TAAGTTAATCCAAACATACT+CGG | + | chr7_4:60212855-60212874 | None:intergenic | 25.0% |
!! | AGTTTGACACTATTTTATCT+TGG | - | chr7_4:60212962-60212981 | Msa1167730:intron | 25.0% |
!! | GTTTGACACTATTTTATCTT+GGG | - | chr7_4:60212963-60212982 | Msa1167730:intron | 25.0% |
! | CTCAATTGTTTGAATTTACA+TGG | + | chr7_4:60213161-60213180 | None:intergenic | 25.0% |
! | TATTATTACCCAAATCTTGA+GGG | + | chr7_4:60213263-60213282 | None:intergenic | 25.0% |
! | TTATTATTACCCAAATCTTG+AGG | + | chr7_4:60213264-60213283 | None:intergenic | 25.0% |
! | AGATTTGGGTAATAATAAGA+CGG | - | chr7_4:60213266-60213285 | Msa1167730:CDS | 25.0% |
! | AAATGATAGGTTATATGACA+AGG | + | chr7_4:60213399-60213418 | None:intergenic | 25.0% |
! | TGAAGCATGTATTAAATGAT+AGG | + | chr7_4:60213412-60213431 | None:intergenic | 25.0% |
! | AACATTCCATGTATATTTCA+TGG | - | chr7_4:60213436-60213455 | Msa1167730:CDS | 25.0% |
! | ACATTCCATGTATATTTCAT+GGG | - | chr7_4:60213437-60213456 | Msa1167730:CDS | 25.0% |
!!! | ACATGAATCACTTTTGTTTT+AGG | - | chr7_4:60213728-60213747 | Msa1167730:CDS | 25.0% |
!!! | CATGAATCACTTTTGTTTTA+GGG | - | chr7_4:60213729-60213748 | Msa1167730:CDS | 25.0% |
! | AAGTTGGATATTGAAGAAAA+TGG | + | chr7_4:60213956-60213975 | None:intergenic | 25.0% |
!! | CCAGTTTAAAATGATAAAGT+TGG | + | chr7_4:60213972-60213991 | None:intergenic | 25.0% |
!! | CCAACTTTATCATTTTAAAC+TGG | - | chr7_4:60213969-60213988 | Msa1167730:CDS | 25.0% |
! | TTATTTGTATTCATTGGAGA+TGG | - | chr7_4:60214075-60214094 | Msa1167730:CDS | 25.0% |
! | TTATTACCTATTCCTAGTTA+TGG | + | chr7_4:60214138-60214157 | None:intergenic | 25.0% |
! | AAATTGAAAAGGTGAAAAAG+AGG | - | chr7_4:60214300-60214319 | Msa1167730:intron | 25.0% |
!! | TTTAAACATGAGTCTAAGAT+TGG | - | chr7_4:60214503-60214522 | Msa1167730:intron | 25.0% |
!!! | TTTGTTGTTCTTGTCTAATA+TGG | - | chr7_4:60214658-60214677 | Msa1167730:intron | 25.0% |
! | GAAACTTAGGGATTAAATAA+AGG | + | chr7_4:60214808-60214827 | None:intergenic | 25.0% |
!!! | TTTGTTGTTCTTGTCTAATA+TGG | - | chr7_4:60214658-60214677 | Msa1167730:intron | 25.0% |
!!! | AGTTATTTTCTTTTAACCAC+GGG | - | chr7_4:60214930-60214949 | Msa1167730:CDS | 25.0% |
! | TGACATAAGTGTTAGATTAA+TGG | - | chr7_4:60215021-60215040 | Msa1167730:intron | 25.0% |
! | TTGCATAATTAAACAGCTTT+AGG | + | chr7_4:60215428-60215447 | None:intergenic | 25.0% |
! | AATGATTTGATATATGGTAC+AGG | - | chr7_4:60215481-60215500 | Msa1167730:intron | 25.0% |
! | ATGATTTGATATATGGTACA+GGG | - | chr7_4:60215482-60215501 | Msa1167730:intron | 25.0% |
!!! | CATTTATGTTGTTTCAGATA+CGG | + | chr7_4:60215660-60215679 | None:intergenic | 25.0% |
!!! | CTCAAAAAGTGCTTATATTT+AGG | + | chr7_4:60215821-60215840 | None:intergenic | 25.0% |
!! | GCATCTGATAATTTGTATAA+GGG | + | chr7_4:60215869-60215888 | None:intergenic | 25.0% |
!! | TGCATCTGATAATTTGTATA+AGG | + | chr7_4:60215870-60215889 | None:intergenic | 25.0% |
!! | TATTAATTAGGGGTATGTTT+AGG | + | chr7_4:60215908-60215927 | None:intergenic | 25.0% |
! | ACACAAAATACTACAAACAA+AGG | - | chr7_4:60216004-60216023 | Msa1167730:intron | 25.0% |
! | GTGTTGCATAAAACAATAAA+CGG | + | chr7_4:60216192-60216211 | None:intergenic | 25.0% |
!!! | ATTGTTTTATGCAACACATT+TGG | - | chr7_4:60216195-60216214 | Msa1167730:intron | 25.0% |
!! | TCAAATATAGGCTTGTTTAA+AGG | - | chr7_4:60216643-60216662 | Msa1167730:intron | 25.0% |
! | CGCGTGATTATTAAATTTAA+TGG | - | chr7_4:60217066-60217085 | Msa1167730:intron | 25.0% |
! | AACTCTAAATTATCTTCAGA+TGG | + | chr7_4:60217215-60217234 | None:intergenic | 25.0% |
! | TAGAAAATATGCTGTTAGAT+AGG | - | chr7_4:60217359-60217378 | Msa1167730:intron | 25.0% |
!! | AGGTTAGCTCATAAAAAAAT+AGG | - | chr7_4:60217379-60217398 | Msa1167730:intron | 25.0% |
! | AAAGAGGTAATTGAAGAATA+TGG | + | chr7_4:60217489-60217508 | None:intergenic | 25.0% |
! | TTGACAATTCTGGTAAATAT+TGG | - | chr7_4:60217626-60217645 | Msa1167730:intron | 25.0% |
! | AGACTTACTATATCTTCATA+TGG | + | chr7_4:60217909-60217928 | None:intergenic | 25.0% |
! | TAATAGTTAGTGTGTTATGT+CGG | + | chr7_4:60217953-60217972 | None:intergenic | 25.0% |
! | ATTGCCTGATATGAAATTAT+CGG | + | chr7_4:60218138-60218157 | None:intergenic | 25.0% |
!! | CACGTATTTGCTAAAAAAAA+TGG | + | chr7_4:60218216-60218235 | None:intergenic | 25.0% |
!! | ATTTCAAACAGTAGATTTTG+TGG | + | chr7_4:60218257-60218276 | None:intergenic | 25.0% |
!! | AAAATCTACTGTTTGAAATG+TGG | - | chr7_4:60218258-60218277 | Msa1167730:intron | 25.0% |
! | TTAGATCAAATCACAATCAT+GGG | + | chr7_4:60218328-60218347 | None:intergenic | 25.0% |
! | TTTAGATCAAATCACAATCA+TGG | + | chr7_4:60218329-60218348 | None:intergenic | 25.0% |
! | TGCACTAATTAACTAGTATA+TGG | + | chr7_4:60218374-60218393 | None:intergenic | 25.0% |
! | ATTCTTATCGAGTATATTCT+AGG | + | chr7_4:60218415-60218434 | None:intergenic | 25.0% |
! | AGAATTATTGCATATTCGTA+TGG | - | chr7_4:60218528-60218547 | Msa1167730:five_prime_UTR | 25.0% |
! | TCGTATGGATAATAACAAAA+AGG | - | chr7_4:60218543-60218562 | Msa1167730:five_prime_UTR | 25.0% |
! | CGTATGGATAATAACAAAAA+GGG | - | chr7_4:60218544-60218563 | Msa1167730:five_prime_UTR | 25.0% |
!!! | CACACAGGTTTTATTATAAG+TGG | + | chr7_4:60211903-60211922 | None:intergenic | 30.0% |
CACTTATAATAAAACCTGTG+TGG | - | chr7_4:60211901-60211920 | Msa1167730:three_prime_UTR | 30.0% | |
CTTATAATAAAACCTGTGTG+GGG | - | chr7_4:60211903-60211922 | Msa1167730:three_prime_UTR | 30.0% | |
TTGAATCATCATCTGAATCT+CGG | + | chr7_4:60212087-60212106 | None:intergenic | 30.0% | |
ATTGAAGACGAATACAGTAT+CGG | - | chr7_4:60212315-60212334 | Msa1167730:three_prime_UTR | 30.0% | |
TCCAATGATTCTAATCCATT+TGG | - | chr7_4:60212343-60212362 | Msa1167730:CDS | 30.0% | |
!! | ACCAAATGGATTAGAATCAT+TGG | + | chr7_4:60212347-60212366 | None:intergenic | 30.0% |
TTGAGATTAGTATCACCAAA+TGG | + | chr7_4:60212361-60212380 | None:intergenic | 30.0% | |
AGAAGAAAAGACAAGTAGAA+AGG | - | chr7_4:60212627-60212646 | Msa1167730:CDS | 30.0% | |
TTCAGAACACTAACCATATA+TGG | + | chr7_4:60212707-60212726 | None:intergenic | 30.0% | |
ATTTCATACAAGCATGACAT+AGG | - | chr7_4:60212812-60212831 | Msa1167730:intron | 30.0% | |
AAGTTAATCCAAACATACTC+GGG | + | chr7_4:60212854-60212873 | None:intergenic | 30.0% | |
ACTTATTTGAGCTTATCTAC+TGG | - | chr7_4:60212870-60212889 | Msa1167730:intron | 30.0% | |
CTTATTTGAGCTTATCTACT+GGG | - | chr7_4:60212871-60212890 | Msa1167730:intron | 30.0% | |
TATAAGCTGTTTATCCAAAC+AGG | - | chr7_4:60213031-60213050 | Msa1167730:intron | 30.0% | |
ATAAGCTGTTTATCCAAACA+GGG | - | chr7_4:60213032-60213051 | Msa1167730:intron | 30.0% | |
ATTATTACCCAAATCTTGAG+GGG | + | chr7_4:60213262-60213281 | None:intergenic | 30.0% | |
CATTCCATGTATATTTCATG+GGG | - | chr7_4:60213438-60213457 | Msa1167730:CDS | 30.0% | |
! | GAATAATTTGTATACGGACT+TGG | - | chr7_4:60213526-60213545 | Msa1167730:CDS | 30.0% |
!!! | TTTGTTTTAGGGTTTGAAAG+TGG | - | chr7_4:60213740-60213759 | Msa1167730:CDS | 30.0% |
AGTCTATTGAAACCATAACT+AGG | - | chr7_4:60214123-60214142 | Msa1167730:CDS | 30.0% | |
TTGAAACCATAACTAGGAAT+AGG | - | chr7_4:60214129-60214148 | Msa1167730:CDS | 30.0% | |
!! | GCTATTCATTAGTCTTCTTT+AGG | - | chr7_4:60214165-60214184 | Msa1167730:CDS | 30.0% |
!! | TCATTAGTCTTCTTTAGGTA+AGG | - | chr7_4:60214170-60214189 | Msa1167730:CDS | 30.0% |
TGTTCTCTCAATTACAATAC+AGG | - | chr7_4:60214274-60214293 | Msa1167730:intron | 30.0% | |
AATACAGGCAGAAATTGAAA+AGG | - | chr7_4:60214289-60214308 | Msa1167730:intron | 30.0% | |
CTAACAACAAATAATGAGAG+AGG | + | chr7_4:60214377-60214396 | None:intergenic | 30.0% | |
GAAACTTAGGGATTAGATAA+AGG | + | chr7_4:60214579-60214598 | None:intergenic | 30.0% | |
TACATAGCAGTTCTTGTATT+TGG | - | chr7_4:60214701-60214720 | Msa1167730:intron | 30.0% | |
ACATAGCAGTTCTTGTATTT+GGG | - | chr7_4:60214702-60214721 | Msa1167730:intron | 30.0% | |
!!! | TAGACACCAATCTTTTTTGT+AGG | + | chr7_4:60214741-60214760 | None:intergenic | 30.0% |
!!! | ATTTTGAGGCCCAAATATAA+TGG | - | chr7_4:60214973-60214992 | Msa1167730:intron | 30.0% |
TGCACATTGCCATTATATTT+GGG | + | chr7_4:60214985-60215004 | None:intergenic | 30.0% | |
TTGCACATTGCCATTATATT+TGG | + | chr7_4:60214986-60215005 | None:intergenic | 30.0% | |
AAATATAATGGCAATGTGCA+AGG | - | chr7_4:60214985-60215004 | Msa1167730:intron | 30.0% | |
AATATAATGGCAATGTGCAA+GGG | - | chr7_4:60214986-60215005 | Msa1167730:intron | 30.0% | |
TTTGACAAATTCTTTCTTCC+AGG | - | chr7_4:60215072-60215091 | Msa1167730:intron | 30.0% | |
AAATGGAACTGCAGATTAAT+CGG | + | chr7_4:60215228-60215247 | None:intergenic | 30.0% | |
TGACTTTGCTTTGATCAAAA+TGG | + | chr7_4:60215245-60215264 | None:intergenic | 30.0% | |
!! | ATTTTGATCAAAGCAAAGTC+AGG | - | chr7_4:60215244-60215263 | Msa1167730:intron | 30.0% |
TTTACCTTGAAGACCATATA+TGG | + | chr7_4:60215366-60215385 | None:intergenic | 30.0% | |
! | CGTATCTGAAACAACATAAA+TGG | - | chr7_4:60215658-60215677 | Msa1167730:intron | 30.0% |
! | AAAGTGCTTATATTTAGGGA+CGG | + | chr7_4:60215816-60215835 | None:intergenic | 30.0% |
! | ATCCTTTGTTTGTAGTACTT+TGG | + | chr7_4:60215967-60215986 | None:intergenic | 30.0% |
! | TGTTTGTAGTATTTTGTGTG+TGG | + | chr7_4:60216003-60216022 | None:intergenic | 30.0% |
!!! | GAGGGAGTAAATATTTTAGT+TGG | - | chr7_4:60216126-60216145 | Msa1167730:CDS | 30.0% |
!! | TCTTAACTAAGCTTTGAAGA+AGG | + | chr7_4:60216236-60216255 | None:intergenic | 30.0% |
!!! | TATGTGGAGGTGTTTTAAAA+TGG | + | chr7_4:60216533-60216552 | None:intergenic | 30.0% |
TAATGTGATGAAGAATACCT+TGG | + | chr7_4:60216563-60216582 | None:intergenic | 30.0% | |
! | AAGGCATCTGAAAGAATAAA+AGG | + | chr7_4:60216590-60216609 | None:intergenic | 30.0% |
ATTAGAGGATGAAGATAAAC+CGG | - | chr7_4:60216715-60216734 | Msa1167730:intron | 30.0% | |
AAAATGATTCATCAGCAGAA+CGG | + | chr7_4:60216912-60216931 | None:intergenic | 30.0% | |
!! | TTGAAAGCCTTTAAAGCTAT+GGG | - | chr7_4:60217233-60217252 | Msa1167730:intron | 30.0% |
AAATATTGGAGCAGGTTTAT+TGG | - | chr7_4:60217640-60217659 | Msa1167730:intron | 30.0% | |
ATATTTGTTCCACTCATATC+CGG | + | chr7_4:60217718-60217737 | None:intergenic | 30.0% | |
TTTATCTTGTCTACAAGATC+AGG | + | chr7_4:60217813-60217832 | None:intergenic | 30.0% | |
TCTTTCTCTATAGTGTAGTT+CGG | + | chr7_4:60217840-60217859 | None:intergenic | 30.0% | |
AACTACACTATAGAGAAAGA+CGG | - | chr7_4:60217840-60217859 | Msa1167730:CDS | 30.0% | |
CTTACTATATCTTCATATGG+TGG | + | chr7_4:60217906-60217925 | None:intergenic | 30.0% | |
GATAATTTCATATCAGGCAA+TGG | - | chr7_4:60218137-60218156 | Msa1167730:CDS | 30.0% | |
!! | TGCTCCTTTAGAATTTATCT+TGG | + | chr7_4:60218284-60218303 | None:intergenic | 30.0% |
! | AGATAAATTCTAAAGGAGCA+TGG | - | chr7_4:60218284-60218303 | Msa1167730:CDS | 30.0% |
! | TTATCGAGTATATTCTAGGA+AGG | + | chr7_4:60218411-60218430 | None:intergenic | 30.0% |
AGAGGAAATTTCACAGTACA+TGG | - | chr7_4:60212165-60212184 | Msa1167730:three_prime_UTR | 35.0% | |
TTGAAGACGAATACAGTATC+GGG | - | chr7_4:60212316-60212335 | Msa1167730:three_prime_UTR | 35.0% | |
! | CTTCTCAGCTTTAACAGAAA+AGG | + | chr7_4:60212612-60212631 | None:intergenic | 35.0% |
GAAAAGACAAGTAGAAAGGA+TGG | - | chr7_4:60212631-60212650 | Msa1167730:CDS | 35.0% | |
GTTTCAAATTGAAGCGGAAT+CGG | - | chr7_4:60212734-60212753 | Msa1167730:CDS | 35.0% | |
! | GCTTTAGCTTAATAGGTGAT+AGG | - | chr7_4:60212785-60212804 | Msa1167730:CDS | 35.0% |
AACAATAACCCGAGTATGTT+TGG | - | chr7_4:60212843-60212862 | Msa1167730:intron | 35.0% | |
TTGTGAGTTGTGACATTGTT+TGG | - | chr7_4:60212902-60212921 | Msa1167730:intron | 35.0% | |
TGTGAGTTGTGACATTGTTT+GGG | - | chr7_4:60212903-60212922 | Msa1167730:intron | 35.0% | |
TTCATAAGCGCTTATGCTAT+TGG | - | chr7_4:60213002-60213021 | Msa1167730:intron | 35.0% | |
TGTTTATCCAAACAGGGTTT+AGG | - | chr7_4:60213038-60213057 | Msa1167730:intron | 35.0% | |
AGCAGTATGATTAGTAGAGT+GGG | + | chr7_4:60213102-60213121 | None:intergenic | 35.0% | |
GATGGTCTAGGTATTTAAAG+TGG | + | chr7_4:60213211-60213230 | None:intergenic | 35.0% | |
AACATTTGCATAGATGGTCT+AGG | + | chr7_4:60213223-60213242 | None:intergenic | 35.0% | |
CGTCAAAACATTTGCATAGA+TGG | + | chr7_4:60213229-60213248 | None:intergenic | 35.0% | |
TTATTACCCAAATCTTGAGG+GGG | + | chr7_4:60213261-60213280 | None:intergenic | 35.0% | |
TCATCTTACTAACACTACTC+TGG | - | chr7_4:60213301-60213320 | Msa1167730:CDS | 35.0% | |
CCTACTGTTGGAAAATATGT+AGG | + | chr7_4:60213368-60213387 | None:intergenic | 35.0% | |
! | CCTACATATTTTCCAACAGT+AGG | - | chr7_4:60213365-60213384 | Msa1167730:intron | 35.0% |
AAGGTTAACATTCCTACTGT+TGG | + | chr7_4:60213380-60213399 | None:intergenic | 35.0% | |
CATGTATATTTCATGGGGAA+GGG | - | chr7_4:60213443-60213462 | Msa1167730:CDS | 35.0% | |
!! | CTCTGCTTTGATTTTACGTT+AGG | - | chr7_4:60213480-60213499 | Msa1167730:CDS | 35.0% |
TTTACGTTAGGACATGACAA+TGG | - | chr7_4:60213492-60213511 | Msa1167730:CDS | 35.0% | |
! | GGGTCGGAATAATTTGTATA+CGG | - | chr7_4:60213520-60213539 | Msa1167730:CDS | 35.0% |
TTTGAAAGTGGTACACAAAC+AGG | - | chr7_4:60213752-60213771 | Msa1167730:CDS | 35.0% | |
TCATTTCTGTAGTACGTGTT+AGG | - | chr7_4:60213798-60213817 | Msa1167730:CDS | 35.0% | |
GGCAACATTAATAGGAACTT+GGG | + | chr7_4:60213840-60213859 | None:intergenic | 35.0% | |
AGGCAACATTAATAGGAACT+TGG | + | chr7_4:60213841-60213860 | None:intergenic | 35.0% | |
AAACCAGAGGCAACATTAAT+AGG | + | chr7_4:60213848-60213867 | None:intergenic | 35.0% | |
AAGTGCAGGGATTAAATGAA+TGG | + | chr7_4:60213900-60213919 | None:intergenic | 35.0% | |
!! | AACAGTTTTCAGAAAGTGCA+GGG | + | chr7_4:60213913-60213932 | None:intergenic | 35.0% |
!! | AAACAGTTTTCAGAAAGTGC+AGG | + | chr7_4:60213914-60213933 | None:intergenic | 35.0% |
TAATTCGGAATAAGTGCAGA+AGG | + | chr7_4:60214054-60214073 | None:intergenic | 35.0% | |
TTGTATTCATTGGAGATGGT+TGG | - | chr7_4:60214079-60214098 | Msa1167730:CDS | 35.0% | |
TGTATTCATTGGAGATGGTT+GGG | - | chr7_4:60214080-60214099 | Msa1167730:CDS | 35.0% | |
AGCACAACATGAAGAAGAAA+TGG | - | chr7_4:60214346-60214365 | Msa1167730:intron | 35.0% | |
ATGGCATACCAATTATGTCA+AGG | - | chr7_4:60214677-60214696 | Msa1167730:intron | 35.0% | |
! | CTATGTAGCCTTGACATAAT+TGG | + | chr7_4:60214688-60214707 | None:intergenic | 35.0% |
CATAGCAGTTCTTGTATTTG+GGG | - | chr7_4:60214703-60214722 | Msa1167730:intron | 35.0% | |
ATAGCAGTTCTTGTATTTGG+GGG | - | chr7_4:60214704-60214723 | Msa1167730:intron | 35.0% | |
TGCAAGCCTACAAAAAAGAT+TGG | - | chr7_4:60214732-60214751 | Msa1167730:intron | 35.0% | |
! | CTTTTTGTAGGCGACATAAT+TGG | + | chr7_4:60214912-60214931 | None:intergenic | 35.0% |
ATATTTGGGCCTCAAAATAC+CGG | + | chr7_4:60214971-60214990 | None:intergenic | 35.0% | |
TGAACCATATATGGTCTTCA+AGG | - | chr7_4:60215359-60215378 | Msa1167730:CDS | 35.0% | |
ATATATGGTACAGGGTTTGA+CGG | - | chr7_4:60215490-60215509 | Msa1167730:intron | 35.0% | |
AAACAACATAAATGGCAACC+CGG | - | chr7_4:60215666-60215685 | Msa1167730:intron | 35.0% | |
TTCAGATACACCAAATGGTA+AGG | + | chr7_4:60215759-60215778 | None:intergenic | 35.0% | |
! | GTTGTTTCAGATACACCAAA+TGG | + | chr7_4:60215764-60215783 | None:intergenic | 35.0% |
! | CACCAAAGTACTACAAACAA+AGG | - | chr7_4:60215962-60215981 | Msa1167730:intron | 35.0% |
GAAATGTGAAAAAGGCAAAG+CGG | - | chr7_4:60216086-60216105 | Msa1167730:intron | 35.0% | |
AAATGTGAAAAAGGCAAAGC+GGG | - | chr7_4:60216087-60216106 | Msa1167730:intron | 35.0% | |
TATTGGTCACAACTTCATGT+AGG | - | chr7_4:60216258-60216277 | Msa1167730:intron | 35.0% | |
TACGTGTCTTTCCATGTAAA+AGG | + | chr7_4:60216432-60216451 | None:intergenic | 35.0% | |
AAAACACCTCCACATATACA+AGG | - | chr7_4:60216537-60216556 | Msa1167730:intron | 35.0% | |
!! | GCTTACGTAACATTTTAGCA+TGG | + | chr7_4:60216673-60216692 | None:intergenic | 35.0% |
GGTTTATCTTCATCCTCTAA+TGG | + | chr7_4:60216716-60216735 | None:intergenic | 35.0% | |
AGTAAGGATGAAGACAAAGA+TGG | + | chr7_4:60216856-60216875 | None:intergenic | 35.0% | |
GCTTCTTGATTCTCTCTAAT+GGG | + | chr7_4:60216943-60216962 | None:intergenic | 35.0% | |
AGCTTCTTGATTCTCTCTAA+TGG | + | chr7_4:60216944-60216963 | None:intergenic | 35.0% | |
! | GTTGCATGATGATGAAAATG+AGG | - | chr7_4:60216996-60217015 | Msa1167730:intron | 35.0% |
!!! | TATTTTGGTACGTATAGGAG+CGG | - | chr7_4:60217123-60217142 | Msa1167730:intron | 35.0% |
AAAACGAATTCAGGAAGCAA+TGG | - | chr7_4:60217175-60217194 | Msa1167730:intron | 35.0% | |
AAATTATCTTCAGATGGAGC+TGG | + | chr7_4:60217209-60217228 | None:intergenic | 35.0% | |
!! | GTTGAAAGCCTTTAAAGCTA+TGG | - | chr7_4:60217232-60217251 | Msa1167730:intron | 35.0% |
TTCGGAGAAGTTATAAGTTG+TGG | - | chr7_4:60217411-60217430 | Msa1167730:intron | 35.0% | |
GTTGTGGATAAGTATCATAG+AGG | - | chr7_4:60217427-60217446 | Msa1167730:intron | 35.0% | |
ATTCTGGTAAATATTGGAGC+AGG | - | chr7_4:60217632-60217651 | Msa1167730:intron | 35.0% | |
! | TTGAAATACTTTGGCTTCCT+TGG | + | chr7_4:60217684-60217703 | None:intergenic | 35.0% |
TGAACACGGTTGAAATACTT+TGG | + | chr7_4:60217693-60217712 | None:intergenic | 35.0% | |
TTTCTCTATAGTGTAGTTCG+GGG | + | chr7_4:60217838-60217857 | None:intergenic | 35.0% | |
CTTTCTCTATAGTGTAGTTC+GGG | + | chr7_4:60217839-60217858 | None:intergenic | 35.0% | |
TGCATTATTAGATTCCATGC+AGG | - | chr7_4:60217879-60217898 | Msa1167730:CDS | 35.0% | |
TCCGCATTGTAAACAAAGAA+TGG | - | chr7_4:60218026-60218045 | Msa1167730:intron | 35.0% | |
! | CCCATTCTTTGTTTACAATG+CGG | + | chr7_4:60218030-60218049 | None:intergenic | 35.0% |
CCGCATTGTAAACAAAGAAT+GGG | - | chr7_4:60218027-60218046 | Msa1167730:intron | 35.0% | |
TTTAAATGCACATTCGAACG+TGG | - | chr7_4:60218070-60218089 | Msa1167730:intron | 35.0% | |
!!! | TAGCTTCTCCTTTTGATTTG+AGG | - | chr7_4:60218173-60218192 | Msa1167730:intron | 35.0% |
!!! | AGCTTCTCCTTTTGATTTGA+GGG | - | chr7_4:60218174-60218193 | Msa1167730:intron | 35.0% |
GTGGCCAAGATAAATTCTAA+AGG | - | chr7_4:60218277-60218296 | Msa1167730:CDS | 35.0% | |
GTTAATTAGTGCATTCCGTA+TGG | - | chr7_4:60218381-60218400 | Msa1167730:CDS | 35.0% | |
TCAGATTAACAACATCGCCA+AGG | - | chr7_4:60211940-60211959 | Msa1167730:three_prime_UTR | 40.0% | |
CAGATTAACAACATCGCCAA+GGG | - | chr7_4:60211941-60211960 | Msa1167730:three_prime_UTR | 40.0% | |
CATTGTTTAACCCTAACCCT+TGG | + | chr7_4:60211960-60211979 | None:intergenic | 40.0% | |
CAAGGGTTAGGGTTAAACAA+TGG | - | chr7_4:60211958-60211977 | Msa1167730:three_prime_UTR | 40.0% | |
ATCAGATGCAGAGTCATCAT+CGG | + | chr7_4:60212023-60212042 | None:intergenic | 40.0% | |
GACGACAACGATAATAGAAC+TGG | - | chr7_4:60212109-60212128 | Msa1167730:three_prime_UTR | 40.0% | |
TTCCAGAACAATCACAGAAG+AGG | - | chr7_4:60212147-60212166 | Msa1167730:three_prime_UTR | 40.0% | |
TTCCTCTTCTGTGATTGTTC+TGG | + | chr7_4:60212152-60212171 | None:intergenic | 40.0% | |
GGCTAAAAAAGCTCAGAGAA+AGG | - | chr7_4:60212186-60212205 | Msa1167730:three_prime_UTR | 40.0% | |
CAGCAGTATGATTAGTAGAG+TGG | + | chr7_4:60213103-60213122 | None:intergenic | 40.0% | |
CACTCTACTAATCATACTGC+TGG | - | chr7_4:60213101-60213120 | Msa1167730:intron | 40.0% | |
ACACTCGTTCTTTAAACCTC+AGG | - | chr7_4:60213127-60213146 | Msa1167730:intron | 40.0% | |
TTCTAACCCCCTCAAGATTT+GGG | - | chr7_4:60213252-60213271 | Msa1167730:CDS | 40.0% | |
CCTTCCCCATGAAATATACA+TGG | + | chr7_4:60213445-60213464 | None:intergenic | 40.0% | |
CCATGTATATTTCATGGGGA+AGG | - | chr7_4:60213442-60213461 | Msa1167730:CDS | 40.0% | |
TGTAGTACGTGTTAGGTACT+TGG | - | chr7_4:60213805-60213824 | Msa1167730:CDS | 40.0% | |
GTTCCTATTAATGTTGCCTC+TGG | - | chr7_4:60213842-60213861 | Msa1167730:intron | 40.0% | |
!! | GTCCTGTGATTTGTTGCTAA+TGG | - | chr7_4:60214226-60214245 | Msa1167730:intron | 40.0% |
GCAACGAACATTTAGTTGTC+AGG | + | chr7_4:60214252-60214271 | None:intergenic | 40.0% | |
AAAGGTGAAAAAGAGGAGAG+AGG | - | chr7_4:60214307-60214326 | Msa1167730:intron | 40.0% | |
TGAAAAAGAGGAGAGAGGAA+AGG | - | chr7_4:60214312-60214331 | Msa1167730:intron | 40.0% | |
GAAAAAGAGGAGAGAGGAAA+GGG | - | chr7_4:60214313-60214332 | Msa1167730:intron | 40.0% | |
!! | ATTAGTCTTAGCTGTCCTAG+TGG | - | chr7_4:60214440-60214459 | Msa1167730:intron | 40.0% |
GAAAGTCTTCTATCTAGCGA+AGG | - | chr7_4:60214629-60214648 | Msa1167730:intron | 40.0% | |
TAGCAGTTCTTGTATTTGGG+GGG | - | chr7_4:60214705-60214724 | Msa1167730:intron | 40.0% | |
GAAAGTCTTCTATCTAGCGA+AGG | - | chr7_4:60214629-60214648 | Msa1167730:intron | 40.0% | |
! | TTCAACTTCCCGGTATTTTG+AGG | - | chr7_4:60214959-60214978 | Msa1167730:CDS | 40.0% |
TATTTGGGCCTCAAAATACC+GGG | + | chr7_4:60214970-60214989 | None:intergenic | 40.0% | |
TCAGAGATTAGATTGCGTGA+AGG | - | chr7_4:60215267-60215286 | Msa1167730:intron | 40.0% | |
CAGAGATTAGATTGCGTGAA+GGG | - | chr7_4:60215268-60215287 | Msa1167730:intron | 40.0% | |
TGCTTGGTTAGGACATCAAT+TGG | + | chr7_4:60215303-60215322 | None:intergenic | 40.0% | |
!! | TCTCAATGGCTCTGATGATT+TGG | - | chr7_4:60215323-60215342 | Msa1167730:intron | 40.0% |
TGACGACATCAAAATGCATC+TGG | - | chr7_4:60215535-60215554 | Msa1167730:intron | 40.0% | |
AAATGCATCTGGATCTTGAC+AGG | - | chr7_4:60215546-60215565 | Msa1167730:intron | 40.0% | |
AATGCATCTGGATCTTGACA+GGG | - | chr7_4:60215547-60215566 | Msa1167730:intron | 40.0% | |
ACCAACCCATGTGGAATATT+GGG | - | chr7_4:60215574-60215593 | Msa1167730:intron | 40.0% | |
TACCTCCCAATATTCCACAT+GGG | + | chr7_4:60215582-60215601 | None:intergenic | 40.0% | |
ATACCTCCCAATATTCCACA+TGG | + | chr7_4:60215583-60215602 | None:intergenic | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr7_4:60215733-60215752 | None:intergenic | 40.0% | |
TGCTTATATTTAGGGACGGA+GGG | + | chr7_4:60215812-60215831 | None:intergenic | 40.0% | |
!! | GCAAAGCGGGCTTTTATATA+GGG | - | chr7_4:60216100-60216119 | Msa1167730:intron | 40.0% |
TGCAACACATTTGGCCATTA+TGG | - | chr7_4:60216204-60216223 | Msa1167730:intron | 40.0% | |
ACACATTTGGCCATTATGGT+CGG | - | chr7_4:60216208-60216227 | Msa1167730:intron | 40.0% | |
GCTAGCTGAATCTCGAAAAA+AGG | - | chr7_4:60216306-60216325 | Msa1167730:intron | 40.0% | |
TGTAAAAGGTCCTTCACATC+TGG | + | chr7_4:60216418-60216437 | None:intergenic | 40.0% | |
! | GATGTGAAGGACCTTTTACA+TGG | - | chr7_4:60216418-60216437 | Msa1167730:intron | 40.0% |
!! | ATACCTTGGCCTTGTATATG+TGG | + | chr7_4:60216549-60216568 | None:intergenic | 40.0% |
CATCCTTACTGAAATGTGCT+TGG | - | chr7_4:60216866-60216885 | Msa1167730:intron | 40.0% | |
ACACCAAGCACATTTCAGTA+AGG | + | chr7_4:60216872-60216891 | None:intergenic | 40.0% | |
!! | ATGTGCTTGGTGTTTCTCTA+TGG | - | chr7_4:60216879-60216898 | Msa1167730:intron | 40.0% |
GAATCAAGAAGCTGAAGATG+AGG | - | chr7_4:60216951-60216970 | Msa1167730:intron | 40.0% | |
TCATCATCATGCAACAGTTG+TGG | + | chr7_4:60216991-60217010 | None:intergenic | 40.0% | |
!! | AGTATAGCTTTGTCCTCTTC+AGG | + | chr7_4:60217033-60217052 | None:intergenic | 40.0% |
TGAAGAGGACAAAGCTATAC+TGG | - | chr7_4:60217032-60217051 | Msa1167730:intron | 40.0% | |
AGAGCAGCAAAAACGAATTC+AGG | - | chr7_4:60217166-60217185 | Msa1167730:intron | 40.0% | |
GAAACAATACCTGTGAATCG+AGG | + | chr7_4:60217307-60217326 | None:intergenic | 40.0% | |
!! | CCAACTTTTAAGGAGGAAAG+AGG | + | chr7_4:60217505-60217524 | None:intergenic | 40.0% |
CCTCTTTCCTCCTTAAAAGT+TGG | - | chr7_4:60217502-60217521 | Msa1167730:intron | 40.0% | |
!! | TCTAGTGCCAACTTTTAAGG+AGG | + | chr7_4:60217512-60217531 | None:intergenic | 40.0% |
! | GCATCTAGTGCCAACTTTTA+AGG | + | chr7_4:60217515-60217534 | None:intergenic | 40.0% |
TATTGGAGCAGGTTTATTGG+TGG | - | chr7_4:60217643-60217662 | Msa1167730:intron | 40.0% | |
TATTTCAACCGTGTTCACAC+CGG | - | chr7_4:60217696-60217715 | Msa1167730:intron | 40.0% | |
TGTCATGATCATAGTGAGTC+TGG | + | chr7_4:60217743-60217762 | None:intergenic | 40.0% | |
TTGTACCCTTGCACAATCTT+TGG | + | chr7_4:60217774-60217793 | None:intergenic | 40.0% | |
TACACTATAGAGAAAGACGG+CGG | - | chr7_4:60217843-60217862 | Msa1167730:CDS | 40.0% | |
TAGTTAGTGTGTTATGTCGG+TGG | + | chr7_4:60217950-60217969 | None:intergenic | 40.0% | |
TGGGAATACTCTCACAAGAA+AGG | - | chr7_4:60218046-60218065 | Msa1167730:intron | 40.0% | |
TATGAAATTATCGGCGGTAG+CGG | + | chr7_4:60218129-60218148 | None:intergenic | 40.0% | |
ACCGCCGATAATTTCATATC+AGG | - | chr7_4:60218131-60218150 | Msa1167730:CDS | 40.0% | |
GCCTGATATGAAATTATCGG+CGG | + | chr7_4:60218135-60218154 | None:intergenic | 40.0% | |
ACAGCTTCCCTCAAATCAAA+AGG | + | chr7_4:60218184-60218203 | None:intergenic | 40.0% | |
! | TTCTAGGAAGGAACACCATA+CGG | + | chr7_4:60218399-60218418 | None:intergenic | 40.0% |
ACTCGATAAGAATCTCGAGA+TGG | - | chr7_4:60218422-60218441 | Msa1167730:CDS | 40.0% | |
CTCGATAAGAATCTCGAGAT+GGG | - | chr7_4:60218423-60218442 | Msa1167730:CDS | 40.0% | |
TCAATCGAATTTCCCCACAC+AGG | + | chr7_4:60211918-60211937 | None:intergenic | 45.0% | |
TAACAACATCGCCAAGGGTT+AGG | - | chr7_4:60211946-60211965 | Msa1167730:three_prime_UTR | 45.0% | |
AACAACATCGCCAAGGGTTA+GGG | - | chr7_4:60211947-60211966 | Msa1167730:three_prime_UTR | 45.0% | |
TAGGGTTAAACAATGGCGAG+CGG | - | chr7_4:60211965-60211984 | Msa1167730:three_prime_UTR | 45.0% | |
ATTGAGCGCGATGTTACTCA+AGG | - | chr7_4:60212572-60212591 | Msa1167730:CDS | 45.0% | |
CAACAGACCTAAACCCTGTT+TGG | + | chr7_4:60213048-60213067 | None:intergenic | 45.0% | |
CAAACAGGGTTTAGGTCTGT+TGG | - | chr7_4:60213046-60213065 | Msa1167730:intron | 45.0% | |
TTACATGGGACATGTTCCTG+AGG | + | chr7_4:60213146-60213165 | None:intergenic | 45.0% | |
CTTCTAACCCCCTCAAGATT+TGG | - | chr7_4:60213251-60213270 | Msa1167730:CDS | 45.0% | |
CGTTAGGACATGACAATGGT+TGG | - | chr7_4:60213496-60213515 | Msa1167730:CDS | 45.0% | |
TAGGACATGACAATGGTTGG+TGG | - | chr7_4:60213499-60213518 | Msa1167730:CDS | 45.0% | |
AGGACATGACAATGGTTGGT+GGG | - | chr7_4:60213500-60213519 | Msa1167730:CDS | 45.0% | |
TTCATTGGAGATGGTTGGGT+TGG | - | chr7_4:60214084-60214103 | Msa1167730:CDS | 45.0% | |
TCATTGGAGATGGTTGGGTT+GGG | - | chr7_4:60214085-60214104 | Msa1167730:CDS | 45.0% | |
GGCCATTAGCAACAAATCAC+AGG | + | chr7_4:60214231-60214250 | None:intergenic | 45.0% | |
CATAGTAACACACTGCCACT+AGG | + | chr7_4:60214458-60214477 | None:intergenic | 45.0% | |
GGAAGTTGAATTATAGCCCG+TGG | + | chr7_4:60214949-60214968 | None:intergenic | 45.0% | |
CGGGCTATAATTCAACTTCC+CGG | - | chr7_4:60214949-60214968 | Msa1167730:CDS | 45.0% | |
GTTCTCTAGCTAACAATGCC+TGG | + | chr7_4:60215093-60215112 | None:intergenic | 45.0% | |
GTTCCAGGACTGGGAAAAAA+AGG | - | chr7_4:60215126-60215145 | Msa1167730:CDS | 45.0% | |
!!! | CTTCCTTTTTTTCCCAGTCC+TGG | + | chr7_4:60215132-60215151 | None:intergenic | 45.0% |
GGACTGGGAAAAAAAGGAAG+AGG | - | chr7_4:60215132-60215151 | Msa1167730:CDS | 45.0% | |
CTGGGAAAAAAAGGAAGAGG+AGG | - | chr7_4:60215135-60215154 | Msa1167730:CDS | 45.0% | |
GTCCTAACCAAGCATCTCAA+TGG | - | chr7_4:60215309-60215328 | Msa1167730:intron | 45.0% | |
AGCCATTGAGATGCTTGGTT+AGG | + | chr7_4:60215314-60215333 | None:intergenic | 45.0% | |
ATCAGAGCCATTGAGATGCT+TGG | + | chr7_4:60215319-60215338 | None:intergenic | 45.0% | |
CACCAACCCATGTGGAATAT+TGG | - | chr7_4:60215573-60215592 | Msa1167730:intron | 45.0% | |
TCCCAATATTCCACATGGGT+TGG | + | chr7_4:60215578-60215597 | None:intergenic | 45.0% | |
AACCCATGTGGAATATTGGG+AGG | - | chr7_4:60215577-60215596 | Msa1167730:intron | 45.0% | |
CATGTGCAGAGCTCAAACAA+GGG | + | chr7_4:60215616-60215635 | None:intergenic | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr7_4:60215734-60215753 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr7_4:60215737-60215756 | None:intergenic | 45.0% | |
TTGTACGCAGCCTTACCATT+TGG | - | chr7_4:60215746-60215765 | Msa1167730:intron | 45.0% | |
GTGCTTATATTTAGGGACGG+AGG | + | chr7_4:60215813-60215832 | None:intergenic | 45.0% | |
!! | GGCAAAGCGGGCTTTTATAT+AGG | - | chr7_4:60216099-60216118 | Msa1167730:intron | 45.0% |
!! | AGCGGGCTTTTATATAGGGA+CGG | - | chr7_4:60216104-60216123 | Msa1167730:intron | 45.0% |
! | GGCTTTTATATAGGGACGGA+GGG | - | chr7_4:60216108-60216127 | Msa1167730:intron | 45.0% |
TCTCCTTGTGGTGTGTGATT+GGG | - | chr7_4:60216282-60216301 | Msa1167730:intron | 45.0% | |
AGGATGCAATTGATCGAGCT+AGG | - | chr7_4:60216326-60216345 | Msa1167730:intron | 45.0% | |
GGATGCAATTGATCGAGCTA+GGG | - | chr7_4:60216327-60216346 | Msa1167730:intron | 45.0% | |
! | TGAGCTGCTTGCTGAACAAA+GGG | - | chr7_4:60216372-60216391 | Msa1167730:intron | 45.0% |
TGGAAAGACACGTACAGAGT+TGG | - | chr7_4:60216438-60216457 | Msa1167730:intron | 45.0% | |
TACAGAGTTGGAAGCCTTAC+AGG | - | chr7_4:60216450-60216469 | Msa1167730:intron | 45.0% | |
TGACTCAATGTGAGCCTGTA+AGG | + | chr7_4:60216467-60216486 | None:intergenic | 45.0% | |
ATTGAGTCAGAGATGCGTAC+TGG | - | chr7_4:60216478-60216497 | Msa1167730:intron | 45.0% | |
AGCAAAGGTGGTTGAGTACT+GGG | - | chr7_4:60216504-60216523 | Msa1167730:intron | 45.0% | |
ACGTCTTGAGCAACCATTAG+AGG | - | chr7_4:60216700-60216719 | Msa1167730:intron | 45.0% | |
TGCTCTTGACATGATACCTG+AGG | - | chr7_4:60216742-60216761 | Msa1167730:intron | 45.0% | |
TCTTGACATGATACCTGAGG+AGG | - | chr7_4:60216745-60216764 | Msa1167730:intron | 45.0% | |
ATATACTGAGGAGGATGAGG+AGG | - | chr7_4:60216769-60216788 | Msa1167730:intron | 45.0% | |
!! | TGATTCTCTCTAATGGGCTC+TGG | + | chr7_4:60216937-60216956 | None:intergenic | 45.0% |
GGAAGCTATTGATCCTGAAG+AGG | - | chr7_4:60217017-60217036 | Msa1167730:intron | 45.0% | |
!! | CATGGCTCCCATAGCTTTAA+AGG | + | chr7_4:60217243-60217262 | None:intergenic | 45.0% |
!! | CTTTAAAGCTATGGGAGCCA+TGG | - | chr7_4:60217241-60217260 | Msa1167730:intron | 45.0% |
ACTCATATCCGGTGTGAACA+CGG | + | chr7_4:60217707-60217726 | None:intergenic | 45.0% | |
! | CTTGCACAATCTTTGGAGGT+GGG | + | chr7_4:60217767-60217786 | None:intergenic | 45.0% |
CACCTCCAAAGATTGTGCAA+GGG | - | chr7_4:60217766-60217785 | Msa1167730:intron | 45.0% | |
TACCCTTGCACAATCTTTGG+AGG | + | chr7_4:60217771-60217790 | None:intergenic | 45.0% | |
TTCCTTGTGTCTTCCATGAC+AGG | - | chr7_4:60218000-60218019 | Msa1167730:intron | 45.0% | |
TGATACCTAGGGATGACGAT+AGG | - | chr7_4:60218459-60218478 | Msa1167730:CDS | 45.0% | |
GATACCTAGGGATGACGATA+GGG | - | chr7_4:60218460-60218479 | Msa1167730:CDS | 45.0% | |
!! | AAAAATTCAAATTATATATA+TGG | + | chr7_4:60217334-60217353 | None:intergenic | 5.0% |
!!! | TAATTTATTTTTATATTTGA+AGG | - | chr7_4:60217552-60217571 | Msa1167730:intron | 5.0% |
!! | CATGACAATGGTTGGTGGGT+CGG | - | chr7_4:60213504-60213523 | Msa1167730:CDS | 50.0% |
! | ATGTTGCCTCTGGTTTCGAC+TGG | - | chr7_4:60213852-60213871 | Msa1167730:intron | 50.0% |
TGTACACCAGTCGAAACCAG+AGG | + | chr7_4:60213861-60213880 | None:intergenic | 50.0% | |
! | CATTGGAGATGGTTGGGTTG+GGG | - | chr7_4:60214086-60214105 | Msa1167730:CDS | 50.0% |
GGTTAGGACATCAATTGGCC+TGG | + | chr7_4:60215298-60215317 | None:intergenic | 50.0% | |
GCATGTGCAGAGCTCAAACA+AGG | + | chr7_4:60215617-60215636 | None:intergenic | 50.0% | |
! | GGGCTTTTATATAGGGACGG+AGG | - | chr7_4:60216107-60216126 | Msa1167730:intron | 50.0% |
!! | GAAGAAGGTGCCGACCATAA+TGG | + | chr7_4:60216221-60216240 | None:intergenic | 50.0% |
CTTCATGTAGGCTCTCCTTG+TGG | - | chr7_4:60216270-60216289 | Msa1167730:intron | 50.0% | |
CTCTCCTTGTGGTGTGTGAT+TGG | - | chr7_4:60216281-60216300 | Msa1167730:intron | 50.0% | |
! | CTGAGCTGCTTGCTGAACAA+AGG | - | chr7_4:60216371-60216390 | Msa1167730:intron | 50.0% |
! | GAGCTGCTTGCTGAACAAAG+GGG | - | chr7_4:60216373-60216392 | Msa1167730:intron | 50.0% |
! | CTTCACATCTGGCTCAACAC+TGG | + | chr7_4:60216407-60216426 | None:intergenic | 50.0% |
! | CAGTGTTGAGCCAGATGTGA+AGG | - | chr7_4:60216405-60216424 | Msa1167730:intron | 50.0% |
! | GATGCGTACTGGTACAGCAA+AGG | - | chr7_4:60216489-60216508 | Msa1167730:intron | 50.0% |
CAGCAAAGGTGGTTGAGTAC+TGG | - | chr7_4:60216503-60216522 | Msa1167730:intron | 50.0% | |
!! | AAAGGTGGTTGAGTACTGGG+AGG | - | chr7_4:60216507-60216526 | Msa1167730:intron | 50.0% |
!! | CCTTGGCCTTGTATATGTGG+AGG | + | chr7_4:60216546-60216565 | None:intergenic | 50.0% |
CCTCCACATATACAAGGCCA+AGG | - | chr7_4:60216543-60216562 | Msa1167730:intron | 50.0% | |
! | ATCATGTCAAGAGCACGCTC+CGG | + | chr7_4:60216737-60216756 | None:intergenic | 50.0% |
! | ACCTGAGGAGGCATATACTG+AGG | - | chr7_4:60216757-60216776 | Msa1167730:intron | 50.0% |
TCCTCAGTATATGCCTCCTC+AGG | + | chr7_4:60216761-60216780 | None:intergenic | 50.0% | |
! | TGAGGAGGCATATACTGAGG+AGG | - | chr7_4:60216760-60216779 | Msa1167730:intron | 50.0% |
GGCATATACTGAGGAGGATG+AGG | - | chr7_4:60216766-60216785 | Msa1167730:intron | 50.0% | |
GATGAGGAGGAGGATGCTAA+AGG | - | chr7_4:60216782-60216801 | Msa1167730:intron | 50.0% | |
CAAGAAGCTGAAGATGAGGC+TGG | - | chr7_4:60216955-60216974 | Msa1167730:intron | 50.0% | |
CGTATAGGAGCGGAAACGTA+TGG | - | chr7_4:60217133-60217152 | Msa1167730:intron | 50.0% | |
GCGGAAACGTATGGCTGTAA+TGG | - | chr7_4:60217142-60217161 | Msa1167730:intron | 50.0% | |
TAAAGCTATGGGAGCCATGG+AGG | - | chr7_4:60217244-60217263 | Msa1167730:intron | 50.0% | |
TGAAGTGAGCCTCGATTCAC+AGG | - | chr7_4:60217295-60217314 | Msa1167730:intron | 50.0% | |
GGCATGACAAGTACAGACCA+AGG | - | chr7_4:60217664-60217683 | Msa1167730:intron | 50.0% | |
GTGTTCACACCGGATATGAG+TGG | - | chr7_4:60217706-60217725 | Msa1167730:intron | 50.0% | |
! | CCTTGCACAATCTTTGGAGG+TGG | + | chr7_4:60217768-60217787 | None:intergenic | 50.0% |
CCACCTCCAAAGATTGTGCA+AGG | - | chr7_4:60217765-60217784 | Msa1167730:intron | 50.0% | |
ATAGAGAAAGACGGCGGCAA+TGG | - | chr7_4:60217849-60217868 | Msa1167730:CDS | 50.0% | |
TAGAGAAAGACGGCGGCAAT+GGG | - | chr7_4:60217850-60217869 | Msa1167730:CDS | 50.0% | |
CTTCATATGGTGGTCCTGCA+TGG | + | chr7_4:60217896-60217915 | None:intergenic | 50.0% | |
AGCCTGTCATGGAAGACACA+AGG | + | chr7_4:60218005-60218024 | None:intergenic | 50.0% | |
ACAATGCGGAAAGCCTGTCA+TGG | + | chr7_4:60218016-60218035 | None:intergenic | 50.0% | |
AATCTCGAGATGGGTCTCTC+CGG | - | chr7_4:60218432-60218451 | Msa1167730:CDS | 50.0% | |
!!! | ACTAGTTTTCCGGCGGTGGT+CGG | + | chr7_4:60212053-60212072 | None:intergenic | 55.0% |
!!! | GTGACCGGCGACTAGTTTTC+CGG | + | chr7_4:60212063-60212082 | None:intergenic | 55.0% |
CATCTGAATCTCGGCGTGAC+CGG | + | chr7_4:60212078-60212097 | None:intergenic | 55.0% | |
!! | AGATGGTTGGGTTGGGGATC+TGG | - | chr7_4:60214092-60214111 | Msa1167730:CDS | 55.0% |
TCGAGCTGAGTTCCAGGACT+GGG | - | chr7_4:60215117-60215136 | Msa1167730:CDS | 55.0% | |
GCTCCCAATCACACACCACA+AGG | + | chr7_4:60216288-60216307 | None:intergenic | 55.0% | |
ATTGATCGAGCTAGGGTGCG+TGG | - | chr7_4:60216334-60216353 | Msa1167730:intron | 55.0% | |
TGTTCAGCAAGCAGCTCAGC+AGG | + | chr7_4:60216370-60216389 | None:intergenic | 55.0% | |
! | GCGTACTGGTACAGCAAAGG+TGG | - | chr7_4:60216492-60216511 | Msa1167730:intron | 55.0% |
TACTGAGGAGGATGAGGAGG+AGG | - | chr7_4:60216772-60216791 | Msa1167730:intron | 55.0% | |
GAGGATGGAGACGCAGTGTT+TGG | - | chr7_4:60217263-60217282 | Msa1167730:intron | 55.0% | |
GGAGACGCAGTGTTTGGATC+TGG | - | chr7_4:60217269-60217288 | Msa1167730:intron | 55.0% | |
AGAGAAAGACGGCGGCAATG+GGG | - | chr7_4:60217851-60217870 | Msa1167730:CDS | 55.0% | |
! | GAAATTATCGGCGGTAGCGG+TGG | + | chr7_4:60218126-60218145 | None:intergenic | 55.0% |
TCTCCGGCGAGTGATACCTA+GGG | - | chr7_4:60218448-60218467 | Msa1167730:CDS | 55.0% | |
CATCCCTAGGTATCACTCGC+CGG | + | chr7_4:60218454-60218473 | None:intergenic | 55.0% | |
CAGACCCTATCGTCATCCCT+AGG | + | chr7_4:60218467-60218486 | None:intergenic | 55.0% | |
ACCGCCGGAAAACTAGTCGC+CGG | - | chr7_4:60212056-60212075 | Msa1167730:three_prime_UTR | 60.0% | |
!!! | ACCGGCGACTAGTTTTCCGG+CGG | + | chr7_4:60212060-60212079 | None:intergenic | 60.0% |
ACGTGCTCGAGCTGAGTTCC+AGG | - | chr7_4:60215111-60215130 | Msa1167730:CDS | 60.0% | |
CTCGAGCTGAGTTCCAGGAC+TGG | - | chr7_4:60215116-60215135 | Msa1167730:CDS | 60.0% | |
CAGGGCAACACCAACCCATG+TGG | - | chr7_4:60215565-60215584 | Msa1167730:intron | 60.0% | |
! | ACGCGGGAGCTTTAGTGCAC+CGG | + | chr7_4:60215688-60215707 | None:intergenic | 60.0% |
ACTAAAGCTCCCGCGTACGC+AGG | - | chr7_4:60215692-60215711 | Msa1167730:intron | 60.0% | |
CTAAAGCTCCCGCGTACGCA+GGG | - | chr7_4:60215693-60215712 | Msa1167730:intron | 60.0% | |
! | AAATGGTGGGACCCCTTCCC+CGG | + | chr7_4:60215720-60215739 | None:intergenic | 60.0% |
TCAGCAAGCAGCTCAGCAGG+AGG | + | chr7_4:60216367-60216386 | None:intergenic | 60.0% | |
GCTATGGGAGCCATGGAGGA+TGG | - | chr7_4:60217248-60217267 | Msa1167730:intron | 60.0% | |
CACTGCGTCTCCATCCTCCA+TGG | + | chr7_4:60217261-60217280 | None:intergenic | 60.0% | |
CTCTCCGGCGAGTGATACCT+AGG | - | chr7_4:60218447-60218466 | Msa1167730:CDS | 60.0% | |
ATTCCGACTCCGACCACCGC+CGG | - | chr7_4:60212041-60212060 | Msa1167730:three_prime_UTR | 65.0% | |
TTTCCGGCGGTGGTCGGAGT+CGG | + | chr7_4:60212047-60212066 | None:intergenic | 65.0% | |
!!! | GGCGACTAGTTTTCCGGCGG+TGG | + | chr7_4:60212057-60212076 | None:intergenic | 65.0% |
! | GATTGCGTGAAGGGCGTGCC+AGG | - | chr7_4:60215277-60215296 | Msa1167730:intron | 65.0% |
! | CGCGGGAGCTTTAGTGCACC+GGG | + | chr7_4:60215687-60215706 | None:intergenic | 65.0% |
GGGGAAGGGGTCCCACCATT+TGG | - | chr7_4:60215719-60215738 | Msa1167730:intron | 65.0% | |
TTCCCCGGACCCTGCGTACG+CGG | + | chr7_4:60215705-60215724 | None:intergenic | 70.0% | |
CGTACGCAGGGTCCGGGGAA+GGG | - | chr7_4:60215705-60215724 | Msa1167730:intron | 70.0% | |
GTACGCAGGGTCCGGGGAAG+GGG | - | chr7_4:60215706-60215725 | Msa1167730:intron | 70.0% | |
GCTCCCGCGTACGCAGGGTC+CGG | - | chr7_4:60215698-60215717 | Msa1167730:intron | 75.0% | |
CTCCCGCGTACGCAGGGTCC+GGG | - | chr7_4:60215699-60215718 | Msa1167730:intron | 75.0% | |
TCCCGCGTACGCAGGGTCCG+GGG | - | chr7_4:60215700-60215719 | Msa1167730:intron | 75.0% | |
TCCCCGGACCCTGCGTACGC+GGG | + | chr7_4:60215704-60215723 | None:intergenic | 75.0% | |
GCGTACGCAGGGTCCGGGGA+AGG | - | chr7_4:60215704-60215723 | Msa1167730:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 60211892 | 60218589 | 60211892 | ID=Msa1167730;Name=Msa1167730 |
chr7_4 | mRNA | 60211892 | 60218589 | 60211892 | ID=Msa1167730-mRNA-1;Parent=Msa1167730;Name=Msa1167730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=85|1|1|1|1|1|13|448|647 |
chr7_4 | exon | 60211892 | 60212459 | 60211892 | ID=Msa1167730-mRNA-1:exon:18800;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60212561 | 60212827 | 60212561 | ID=Msa1167730-mRNA-1:exon:18799;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60213165 | 60213341 | 60213165 | ID=Msa1167730-mRNA-1:exon:18798;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60213428 | 60213576 | 60213428 | ID=Msa1167730-mRNA-1:exon:18797;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60213678 | 60213828 | 60213678 | ID=Msa1167730-mRNA-1:exon:18796;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60213917 | 60214201 | 60213917 | ID=Msa1167730-mRNA-1:exon:18795;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60214883 | 60214978 | 60214883 | ID=Msa1167730-mRNA-1:exon:18794;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60215101 | 60215241 | 60215101 | ID=Msa1167730-mRNA-1:exon:18793;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60215325 | 60215387 | 60215325 | ID=Msa1167730-mRNA-1:exon:18792;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60216114 | 60216185 | 60216114 | ID=Msa1167730-mRNA-1:exon:18791;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60217829 | 60217928 | 60217829 | ID=Msa1167730-mRNA-1:exon:18790;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60218095 | 60218186 | 60218095 | ID=Msa1167730-mRNA-1:exon:18789;Parent=Msa1167730-mRNA-1 |
chr7_4 | exon | 60218274 | 60218589 | 60218274 | ID=Msa1167730-mRNA-1:exon:18788;Parent=Msa1167730-mRNA-1 |
chr7_4 | five_prime_UTR | 60218505 | 60218589 | 60218505 | ID=Msa1167730-mRNA-1:five_prime_utr;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60218274 | 60218504 | 60218274 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60218095 | 60218186 | 60218095 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60217829 | 60217928 | 60217829 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60216114 | 60216185 | 60216114 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60215325 | 60215387 | 60215325 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60215101 | 60215241 | 60215101 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60214883 | 60214978 | 60214883 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60213917 | 60214201 | 60213917 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60213678 | 60213828 | 60213678 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60213428 | 60213576 | 60213428 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60213165 | 60213341 | 60213165 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60212561 | 60212827 | 60212561 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | CDS | 60212340 | 60212459 | 60212340 | ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1 |
chr7_4 | three_prime_UTR | 60211892 | 60212339 | 60211892 | ID=Msa1167730-mRNA-1:three_prime_utr;Parent=Msa1167730-mRNA-1 |
Gene Sequence |
Protein sequence |