AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167730 MtrunA17_Chr7g0265361 98.765 648 7 1 1 647 1 648 0.0 1316
Msa1167730 MtrunA17_Chr1g0179691 78.884 663 113 4 6 647 2 658 0.0 1025
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167730 AT1G03910.1 76.740 589 132 2 62 647 86 672 0.0 931
Msa1167730 AT1G03910.2 71.406 633 132 3 62 647 86 716 0.0 910
Msa1167730 AT2G36815.2 51.546 97 33 2 269 364 17 100 5.60e-21 88.6
Msa1167730 AT2G36815.1 52.128 94 31 2 272 364 26 106 3.24e-20 86.7

Find 191 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGCTCCCATAGCTTTAA+AGG 0.146220 7_4:+60213219 None:intergenic
TGACTTTGCTTTGATCAAAA+TGG 0.168302 7_4:+60215217 None:intergenic
AGCTTCTTGATTCTCTCTAA+TGG 0.217152 7_4:+60213518 None:intergenic
CACCAACCCATGTGGAATAT+TGG 0.248519 7_4:-60214886 Msa1167730:CDS
TCGTATGGATAATAACAAAA+AGG 0.249074 7_4:-60211916 Msa1167730:three_prime_UTR
TCAAATATAGGCTTGTTTAA+AGG 0.267285 7_4:-60213816 Msa1167730:intron
ATTCTTATCGAGTATATTCT+AGG 0.269159 7_4:+60212047 None:intergenic
TTGTACCCTTGCACAATCTT+TGG 0.280919 7_4:+60212688 None:intergenic
TTTACCTTGAAGACCATATA+TGG 0.284103 7_4:+60215096 None:intergenic
CTCTCCTTGTGGTGTGTGAT+TGG 0.286802 7_4:-60214178 Msa1167730:CDS
GCTTCTTGATTCTCTCTAAT+GGG 0.293100 7_4:+60213519 None:intergenic
TACAGAGTTGGAAGCCTTAC+AGG 0.297377 7_4:-60214009 Msa1167730:CDS
AAATATTGGAGCAGGTTTAT+TGG 0.299548 7_4:-60212819 Msa1167730:intron
TTCCTCTTCTGTGATTGTTC+TGG 0.304361 7_4:+60218310 None:intergenic
CTTTCTCTATAGTGTAGTTC+GGG 0.307351 7_4:+60212623 None:intergenic
TCTCAATGGCTCTGATGATT+TGG 0.310949 7_4:-60215136 Msa1167730:CDS
GGTTTATCTTCATCCTCTAA+TGG 0.311251 7_4:+60213746 None:intergenic
TAACAACATCGCCAAGGGTT+AGG 0.311822 7_4:-60218513 Msa1167730:five_prime_UTR
AGAAATAAATGAACCATATA+TGG 0.332368 7_4:-60215109 Msa1167730:CDS
ACGTGCTCGAGCTGAGTTCC+AGG 0.339829 7_4:-60215348 Msa1167730:CDS
TCCAATGATTCTAATCCATT+TGG 0.349636 7_4:-60218116 Msa1167730:CDS
TTGAAATACTTTGGCTTCCT+TGG 0.351127 7_4:+60212778 None:intergenic
TGCACTAATTAACTAGTATA+TGG 0.353671 7_4:+60212088 None:intergenic
ACCGCCGATAATTTCATATC+AGG 0.373562 7_4:-60212328 Msa1167730:exon
GAGGATGGAGACGCAGTGTT+TGG 0.374545 7_4:-60213196 Msa1167730:CDS
CTTCTCAGCTTTAACAGAAA+AGG 0.376850 7_4:+60217850 None:intergenic
ACCAAATGGATTAGAATCAT+TGG 0.377470 7_4:+60218115 None:intergenic
TGAAGAGGACAAAGCTATAC+TGG 0.377597 7_4:-60213427 Msa1167730:intron
TTTATCTTGTCTACAAGATC+AGG 0.386955 7_4:+60212649 None:intergenic
ACCAACCCATGTGGAATATT+GGG 0.388380 7_4:-60214885 Msa1167730:CDS
TCTTTCTCTATAGTGTAGTT+CGG 0.388508 7_4:+60212622 None:intergenic
TGCTCCTTTAGAATTTATCT+TGG 0.394381 7_4:+60212178 None:intergenic
AGTATAGCTTTGTCCTCTTC+AGG 0.395081 7_4:+60213429 None:intergenic
ACGTCTTGAGCAACCATTAG+AGG 0.398700 7_4:-60213759 Msa1167730:CDS
TGTTCAGCAAGCAGCTCAGC+AGG 0.403673 7_4:+60214092 None:intergenic
TCCGCATTGTAAACAAAGAA+TGG 0.405433 7_4:-60212433 Msa1167730:CDS
CAGCAAAGGTGGTTGAGTAC+TGG 0.408832 7_4:-60213956 Msa1167730:CDS
TGACTCAATGTGAGCCTGTA+AGG 0.412240 7_4:+60213995 None:intergenic
ATTGCCTGATATGAAATTAT+CGG 0.423857 7_4:+60212324 None:intergenic
TACGTGTCTTTCCATGTAAA+AGG 0.424095 7_4:+60214030 None:intergenic
TCTCCTTGTGGTGTGTGATT+GGG 0.426562 7_4:-60214177 Msa1167730:CDS
CCTTGCACAATCTTTGGAGG+TGG 0.426781 7_4:+60212694 None:intergenic
TTTAGATCAAATCACAATCA+TGG 0.427509 7_4:+60212133 None:intergenic
GTTGAAAGCCTTTAAAGCTA+TGG 0.428454 7_4:-60213227 Msa1167730:CDS
AGCACAACATGAAGAAGAAA+TGG 0.434364 7_4:-60216113 Msa1167730:intron
TACCCTTGCACAATCTTTGG+AGG 0.435278 7_4:+60212691 None:intergenic
TGTCATGATCATAGTGAGTC+TGG 0.437642 7_4:+60212719 None:intergenic
TGATTCTCTCTAATGGGCTC+TGG 0.438807 7_4:+60213525 None:intergenic
AGCAAAGGTGGTTGAGTACT+GGG 0.442488 7_4:-60213955 Msa1167730:CDS
GAAAAGACAAGTAGAAAGGA+TGG 0.442901 7_4:-60217828 Msa1167730:intron
AACAACATCGCCAAGGGTTA+GGG 0.445137 7_4:-60218512 Msa1167730:five_prime_UTR
TAGAGAAAGACGGCGGCAAT+GGG 0.445619 7_4:-60212609 Msa1167730:CDS
GATTGCGTGAAGGGCGTGCC+AGG 0.446615 7_4:-60215182 Msa1167730:CDS
GACGACAACGATAATAGAAC+TGG 0.446928 7_4:-60218350 Msa1167730:CDS
TGAACCATATATGGTCTTCA+AGG 0.450157 7_4:-60215100 Msa1167730:intron
TGACGACATCAAAATGCATC+TGG 0.451814 7_4:-60214924 Msa1167730:CDS
TGAACACGGTTGAAATACTT+TGG 0.452374 7_4:+60212769 None:intergenic
AGACTTACTATATCTTCATA+TGG 0.456635 7_4:+60212553 None:intergenic
TGCTTGGTTAGGACATCAAT+TGG 0.460472 7_4:+60215159 None:intergenic
AAATGCATCTGGATCTTGAC+AGG 0.460556 7_4:-60214913 Msa1167730:CDS
ATATTTGTTCCACTCATATC+CGG 0.462283 7_4:+60212744 None:intergenic
GGAGACGCAGTGTTTGGATC+TGG 0.464689 7_4:-60213190 Msa1167730:CDS
CCGCATTGTAAACAAAGAAT+GGG 0.467266 7_4:-60212432 Msa1167730:CDS
AGAATTATTGCATATTCGTA+TGG 0.468144 7_4:-60211931 Msa1167730:three_prime_UTR
TGTAAAAGGTCCTTCACATC+TGG 0.469963 7_4:+60214044 None:intergenic
ATTAGAGGATGAAGATAAAC+CGG 0.473687 7_4:-60213744 Msa1167730:CDS
ATCAGAGCCATTGAGATGCT+TGG 0.474442 7_4:+60215143 None:intergenic
GGCATATACTGAGGAGGATG+AGG 0.476259 7_4:-60213693 Msa1167730:CDS
TACTGAGGAGGATGAGGAGG+AGG 0.476354 7_4:-60213687 Msa1167730:CDS
CATCTGAATCTCGGCGTGAC+CGG 0.477601 7_4:+60218384 None:intergenic
AATCTCGAGATGGGTCTCTC+CGG 0.478512 7_4:-60212027 Msa1167730:three_prime_UTR
AACTCTAAATTATCTTCAGA+TGG 0.479290 7_4:+60213247 None:intergenic
TGAGCTGCTTGCTGAACAAA+GGG 0.483674 7_4:-60214087 Msa1167730:CDS
GCGGAAACGTATGGCTGTAA+TGG 0.488174 7_4:-60213317 Msa1167730:CDS
TTGAGATTAGTATCACCAAA+TGG 0.494079 7_4:+60218101 None:intergenic
ACTTATAATAAAACCTGTGT+GGG 0.494617 7_4:-60218557 Msa1167730:five_prime_UTR
ATACCTTGGCCTTGTATATG+TGG 0.497718 7_4:+60213913 None:intergenic
ACAGCTTCCCTCAAATCAAA+AGG 0.499844 7_4:+60212278 None:intergenic
TTGAAGACGAATACAGTATC+GGG 0.502893 7_4:-60218143 Msa1167730:CDS
CTTGCACAATCTTTGGAGGT+GGG 0.503952 7_4:+60212695 None:intergenic
TTTCCGGCGGTGGTCGGAGT+CGG 0.504138 7_4:+60218415 None:intergenic
AAATTATCTTCAGATGGAGC+TGG 0.504991 7_4:+60213253 None:intergenic
AGAAGAAAAGACAAGTAGAA+AGG 0.506412 7_4:-60217832 Msa1167730:CDS
ATATATGGTACAGGGTTTGA+CGG 0.508336 7_4:-60214969 Msa1167730:intron
GATGAGGAGGAGGATGCTAA+AGG 0.508964 7_4:-60213677 Msa1167730:intron
TTGAAAGCCTTTAAAGCTAT+GGG 0.509092 7_4:-60213226 Msa1167730:CDS
TATGAAATTATCGGCGGTAG+CGG 0.509701 7_4:+60212333 None:intergenic
GGTTAGGACATCAATTGGCC+TGG 0.512323 7_4:+60215164 None:intergenic
AGCCATTGAGATGCTTGGTT+AGG 0.515511 7_4:+60215148 None:intergenic
CTCTCCGGCGAGTGATACCT+AGG 0.516411 7_4:-60212012 Msa1167730:three_prime_UTR
TGAAGTGAGCCTCGATTCAC+AGG 0.516699 7_4:-60213164 Msa1167730:intron
TCCTCAGTATATGCCTCCTC+AGG 0.516934 7_4:+60213701 None:intergenic
CAGAGATTAGATTGCGTGAA+GGG 0.520377 7_4:-60215191 Msa1167730:CDS
TCGAGCTGAGTTCCAGGACT+GGG 0.522136 7_4:-60215342 Msa1167730:CDS
CATTGTTTAACCCTAACCCT+TGG 0.524297 7_4:+60218502 None:intergenic
CTCGAGCTGAGTTCCAGGAC+TGG 0.526610 7_4:-60215343 Msa1167730:CDS
CTGAGCTGCTTGCTGAACAA+AGG 0.528929 7_4:-60214088 Msa1167730:CDS
GCTATGGGAGCCATGGAGGA+TGG 0.529591 7_4:-60213211 Msa1167730:CDS
GTCCTAACCAAGCATCTCAA+TGG 0.529933 7_4:-60215150 Msa1167730:CDS
CTTCATATGGTGGTCCTGCA+TGG 0.530669 7_4:+60212566 None:intergenic
GTTAATTAGTGCATTCCGTA+TGG 0.531288 7_4:-60212078 Msa1167730:three_prime_UTR
TGGGAATACTCTCACAAGAA+AGG 0.534055 7_4:-60212413 Msa1167730:CDS
AGGATGCAATTGATCGAGCT+AGG 0.538391 7_4:-60214133 Msa1167730:CDS
GAAATTATCGGCGGTAGCGG+TGG 0.538663 7_4:+60212336 None:intergenic
ATAGAGAAAGACGGCGGCAA+TGG 0.539441 7_4:-60212610 Msa1167730:CDS
TTGAATCATCATCTGAATCT+CGG 0.539509 7_4:+60218375 None:intergenic
CGTATAGGAGCGGAAACGTA+TGG 0.539851 7_4:-60213326 Msa1167730:intron
CTTCACATCTGGCTCAACAC+TGG 0.541181 7_4:+60214055 None:intergenic
AGAGGAAATTTCACAGTACA+TGG 0.541595 7_4:-60218294 Msa1167730:CDS
GTGGCCAAGATAAATTCTAA+AGG 0.547320 7_4:-60212182 Msa1167730:three_prime_UTR
ATTCCGACTCCGACCACCGC+CGG 0.548012 7_4:-60218418 Msa1167730:CDS
ATTGAAGACGAATACAGTAT+CGG 0.548388 7_4:-60218144 Msa1167730:CDS
TATTGGAGCAGGTTTATTGG+TGG 0.548422 7_4:-60212816 Msa1167730:intron
CAAGAAGCTGAAGATGAGGC+TGG 0.549453 7_4:-60213504 Msa1167730:CDS
AATACAGGCAGAAATTGAAA+AGG 0.549731 7_4:-60216170 Msa1167730:intron
TTAGATCAAATCACAATCAT+GGG 0.551398 7_4:+60212134 None:intergenic
TCATCATCATGCAACAGTTG+TGG 0.553991 7_4:+60213471 None:intergenic
AAAACACCTCCACATATACA+AGG 0.555906 7_4:-60213922 Msa1167730:CDS
TGGAAAGACACGTACAGAGT+TGG 0.555932 7_4:-60214021 Msa1167730:CDS
TGATACCTAGGGATGACGAT+AGG 0.558897 7_4:-60212000 Msa1167730:three_prime_UTR
TTCTAGGAAGGAACACCATA+CGG 0.559392 7_4:+60212063 None:intergenic
TGCATTATTAGATTCCATGC+AGG 0.559588 7_4:-60212580 Msa1167730:CDS
GAATCAAGAAGCTGAAGATG+AGG 0.559806 7_4:-60213508 Msa1167730:CDS
CAGTGTTGAGCCAGATGTGA+AGG 0.561664 7_4:-60214054 Msa1167730:CDS
GATAATTTCATATCAGGCAA+TGG 0.562061 7_4:-60212322 Msa1167730:exon
TTCCAGAACAATCACAGAAG+AGG 0.563012 7_4:-60218312 Msa1167730:CDS
ATTGAGTCAGAGATGCGTAC+TGG 0.566781 7_4:-60213981 Msa1167730:CDS
CACTGCGTCTCCATCCTCCA+TGG 0.573173 7_4:+60213201 None:intergenic
CAGATTAACAACATCGCCAA+GGG 0.573344 7_4:-60218518 Msa1167730:five_prime_UTR
GATACCTAGGGATGACGATA+GGG 0.575644 7_4:-60211999 Msa1167730:three_prime_UTR
AGATAAATTCTAAAGGAGCA+TGG 0.580247 7_4:-60212175 Msa1167730:three_prime_UTR
TTATCGAGTATATTCTAGGA+AGG 0.580417 7_4:+60212051 None:intergenic
ATCATGTCAAGAGCACGCTC+CGG 0.581483 7_4:+60213725 None:intergenic
ACTCGATAAGAATCTCGAGA+TGG 0.584204 7_4:-60212037 Msa1167730:three_prime_UTR
CTCGATAAGAATCTCGAGAT+GGG 0.584469 7_4:-60212036 Msa1167730:three_prime_UTR
CCACCTCCAAAGATTGTGCA+AGG 0.584490 7_4:-60212694 Msa1167730:CDS
GTTGCATGATGATGAAAATG+AGG 0.585801 7_4:-60213463 Msa1167730:CDS
CATCCCTAGGTATCACTCGC+CGG 0.586976 7_4:+60212008 None:intergenic
TCAGATTAACAACATCGCCA+AGG 0.587348 7_4:-60218519 Msa1167730:five_prime_UTR
TCCCAATATTCCACATGGGT+TGG 0.589582 7_4:+60214884 None:intergenic
CCCATTCTTTGTTTACAATG+CGG 0.589870 7_4:+60212432 None:intergenic
CTTTAAAGCTATGGGAGCCA+TGG 0.593812 7_4:-60213218 Msa1167730:CDS
ACTCATATCCGGTGTGAACA+CGG 0.594826 7_4:+60212755 None:intergenic
ATTGATCGAGCTAGGGTGCG+TGG 0.595446 7_4:-60214125 Msa1167730:CDS
AAAATCTACTGTTTGAAATG+TGG 0.597918 7_4:-60212201 Msa1167730:three_prime_UTR
ATCAGATGCAGAGTCATCAT+CGG 0.601881 7_4:+60218439 None:intergenic
AAAACGAATTCAGGAAGCAA+TGG 0.607367 7_4:-60213284 Msa1167730:CDS
GGATGCAATTGATCGAGCTA+GGG 0.616184 7_4:-60214132 Msa1167730:CDS
ATATACTGAGGAGGATGAGG+AGG 0.617133 7_4:-60213690 Msa1167730:CDS
CACTTATAATAAAACCTGTG+TGG 0.619395 7_4:-60218558 Msa1167730:five_prime_UTR
CTTCATGTAGGCTCTCCTTG+TGG 0.620002 7_4:-60214189 Msa1167730:intron
TCAATCGAATTTCCCCACAC+AGG 0.620333 7_4:+60218544 None:intergenic
GCTCCCAATCACACACCACA+AGG 0.625505 7_4:+60214174 None:intergenic
TTTAAATGCACATTCGAACG+TGG 0.625849 7_4:-60212389 Msa1167730:CDS
TAAAGCTATGGGAGCCATGG+AGG 0.627137 7_4:-60213215 Msa1167730:CDS
GCGTACTGGTACAGCAAAGG+TGG 0.627923 7_4:-60213967 Msa1167730:CDS
CTTACTATATCTTCATATGG+TGG 0.634403 7_4:+60212556 None:intergenic
ACCGCCGGAAAACTAGTCGC+CGG 0.636310 7_4:-60218403 Msa1167730:CDS
TCAGCAAGCAGCTCAGCAGG+AGG 0.636929 7_4:+60214095 None:intergenic
GTGTTCACACCGGATATGAG+TGG 0.640725 7_4:-60212753 Msa1167730:CDS
TCTCCGGCGAGTGATACCTA+GGG 0.641290 7_4:-60212011 Msa1167730:three_prime_UTR
ATTGAGCGCGATGTTACTCA+AGG 0.644189 7_4:-60217887 Msa1167730:CDS
GATGCGTACTGGTACAGCAA+AGG 0.649100 7_4:-60213970 Msa1167730:CDS
TCAGAGATTAGATTGCGTGA+AGG 0.649679 7_4:-60215192 Msa1167730:CDS
AAAATGATTCATCAGCAGAA+CGG 0.650693 7_4:+60213550 None:intergenic
TATTTCAACCGTGTTCACAC+CGG 0.650995 7_4:-60212763 Msa1167730:CDS
CCTCCACATATACAAGGCCA+AGG 0.652292 7_4:-60213916 Msa1167730:intron
GGAAGCTATTGATCCTGAAG+AGG 0.658125 7_4:-60213442 Msa1167730:CDS
AACCCATGTGGAATATTGGG+AGG 0.659144 7_4:-60214882 Msa1167730:intron
TGCTCTTGACATGATACCTG+AGG 0.662422 7_4:-60213717 Msa1167730:CDS
GCCTGATATGAAATTATCGG+CGG 0.663501 7_4:+60212327 None:intergenic
ATACCTCCCAATATTCCACA+TGG 0.666278 7_4:+60214879 None:intergenic
GAAACAATACCTGTGAATCG+AGG 0.669091 7_4:+60213155 None:intergenic
AACTACACTATAGAGAAAGA+CGG 0.678317 7_4:-60212619 Msa1167730:CDS
TGAGGAGGCATATACTGAGG+AGG 0.678998 7_4:-60213699 Msa1167730:CDS
CAGGGCAACACCAACCCATG+TGG 0.679640 7_4:-60214894 Msa1167730:CDS
CACCTCCAAAGATTGTGCAA+GGG 0.681508 7_4:-60212693 Msa1167730:CDS
TCTTGACATGATACCTGAGG+AGG 0.683745 7_4:-60213714 Msa1167730:CDS
TTTCTCTATAGTGTAGTTCG+GGG 0.684958 7_4:+60212624 None:intergenic
GGCATGACAAGTACAGACCA+AGG 0.685007 7_4:-60212795 Msa1167730:CDS
CTTATAATAAAACCTGTGTG+GGG 0.685393 7_4:-60218556 Msa1167730:five_prime_UTR
AGAGAAAGACGGCGGCAATG+GGG 0.685515 7_4:-60212608 Msa1167730:CDS
ACCTGAGGAGGCATATACTG+AGG 0.687934 7_4:-60213702 Msa1167730:CDS
AATGCATCTGGATCTTGACA+GGG 0.688800 7_4:-60214912 Msa1167730:CDS
CAAGGGTTAGGGTTAAACAA+TGG 0.699057 7_4:-60218501 Msa1167730:exon
TAGGGTTAAACAATGGCGAG+CGG 0.710396 7_4:-60218494 Msa1167730:exon
TACCTCCCAATATTCCACAT+GGG 0.710728 7_4:+60214880 None:intergenic
CCTTGGCCTTGTATATGTGG+AGG 0.714941 7_4:+60213916 None:intergenic
AAAGGTGGTTGAGTACTGGG+AGG 0.739956 7_4:-60213952 Msa1167730:CDS
TACACTATAGAGAAAGACGG+CGG 0.747701 7_4:-60212616 Msa1167730:CDS
GAGCTGCTTGCTGAACAAAG+GGG 0.752410 7_4:-60214086 Msa1167730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAATACAAATAATTAATT+CGG + chr7_4:60214069-60214088 None:intergenic 10.0%
!! AATTAATTATTTGTATTCAT+TGG - chr7_4:60214069-60214088 Msa1167730:CDS 10.0%
!! TTAATTAATGATTTGATATA+TGG - chr7_4:60215475-60215494 Msa1167730:intron 10.0%
!!! TGAGTATATAAATTATATTT+TGG - chr7_4:60217108-60217127 Msa1167730:intron 10.0%
!!! ATATATAATTTGAATTTTTC+TGG - chr7_4:60217335-60217354 Msa1167730:intron 10.0%
!!! GAAATAAGATTTTTTTTTAA+CGG + chr7_4:60217983-60218002 None:intergenic 10.0%
!!! TATGTTTTTTTTTTCTTCTA+TGG - chr7_4:60212388-60212407 Msa1167730:CDS 15.0%
!! TAAATATTTCAGATAAATAC+TGG - chr7_4:60212477-60212496 Msa1167730:intron 15.0%
!! AATCATATATATCTTCATAT+TGG + chr7_4:60212506-60212525 None:intergenic 15.0%
!!! ACCTAAAAAATGTTATTTTT+AGG - chr7_4:60212531-60212550 Msa1167730:intron 15.0%
!!! ACCTAAAAATAACATTTTTT+AGG + chr7_4:60212535-60212554 None:intergenic 15.0%
!! AAAAAAATAGAATTAACACT+AGG - chr7_4:60213070-60213089 Msa1167730:intron 15.0%
!!! AGTATTGAAATTTTTTCAAA+AGG + chr7_4:60213587-60213606 None:intergenic 15.0%
!!! AAAAGAAAATAACTTTTTGT+AGG + chr7_4:60214924-60214943 None:intergenic 15.0%
!!! TATTAATTTGCTTCAAATAT+AGG - chr7_4:60216631-60216650 Msa1167730:intron 15.0%
!!! TTTCTGATTTTTTTTTGTTC+AGG - chr7_4:60212273-60212292 Msa1167730:three_prime_UTR 20.0%
!!! ATGTTATTTTTAGGTTTGTT+TGG - chr7_4:60212540-60212559 Msa1167730:intron 20.0%
!! TCAATTGTTTGAATTTACAT+GGG + chr7_4:60213160-60213179 None:intergenic 20.0%
!! TAAAGTCAATCTCTTAAATT+TGG + chr7_4:60213343-60213362 None:intergenic 20.0%
!!! AAACAAGTTTTAAGAACAAT+CGG - chr7_4:60213694-60213713 Msa1167730:CDS 20.0%
!! TTGTTAGTTAATACGTATTA+TGG - chr7_4:60214390-60214409 Msa1167730:intron 20.0%
!! TGTTAGTTAATACGTATTAT+GGG - chr7_4:60214391-60214410 Msa1167730:intron 20.0%
!! TTAAACTAATATGTCAGATT+AGG + chr7_4:60214488-60214507 None:intergenic 20.0%
!! ATTATAACAGTTGAAACTTA+GGG + chr7_4:60214591-60214610 None:intergenic 20.0%
!! AATTATAACAGTTGAAACTT+AGG + chr7_4:60214592-60214611 None:intergenic 20.0%
!! ATTATAACAGTTGAAACTTA+GGG + chr7_4:60214591-60214610 None:intergenic 20.0%
!! AATTATAACAGTTGAAACTT+AGG + chr7_4:60214592-60214611 None:intergenic 20.0%
!!! AAGTTATTTTCTTTTAACCA+CGG - chr7_4:60214929-60214948 Msa1167730:CDS 20.0%
!!! CAAAAACTGTGTTATTTTAT+TGG - chr7_4:60215047-60215066 Msa1167730:intron 20.0%
!! AGAAATAAATGAACCATATA+TGG - chr7_4:60215350-60215369 Msa1167730:CDS 20.0%
!!! TCAAAAAGTGCTTATATTTA+GGG + chr7_4:60215820-60215839 None:intergenic 20.0%
!! TGTATAAGGGTTTATATTTA+TGG + chr7_4:60215856-60215875 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr7_4:60215918-60215937 None:intergenic 20.0%
!! GAAGTTAGTAGTATTAATTA+GGG + chr7_4:60215919-60215938 None:intergenic 20.0%
!! AGAAGTTAGTAGTATTAATT+AGG + chr7_4:60215920-60215939 None:intergenic 20.0%
!! AATTAATACTACTAACTTCT+TGG - chr7_4:60215920-60215939 Msa1167730:intron 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG - chr7_4:60216078-60216097 Msa1167730:intron 20.0%
!!! AGTAAATATTTTAGTTGGAT+TGG - chr7_4:60216131-60216150 Msa1167730:CDS 20.0%
!!! TGAAAGTCATTTAGTTTTTT+TGG + chr7_4:60216160-60216179 None:intergenic 20.0%
!! AAAGCTTAGTTAAGATTTAT+TGG - chr7_4:60216241-60216260 Msa1167730:intron 20.0%
!! GCATTAGAACAAATATTTAA+AGG + chr7_4:60216609-60216628 None:intergenic 20.0%
!!! AAGGTATATACATTTTGTTT+CGG - chr7_4:60216801-60216820 Msa1167730:intron 20.0%
!!! GTTGTTCATTACTTTTTTAT+TGG - chr7_4:60216828-60216847 Msa1167730:intron 20.0%
!! TATACTCATAATAAAAGTAG+AGG + chr7_4:60217096-60217115 None:intergenic 20.0%
!!! AATTATATTTTGGTACGTAT+AGG - chr7_4:60217118-60217137 Msa1167730:intron 20.0%
!! AAAAATAGGATAGAATGATT+CGG - chr7_4:60217393-60217412 Msa1167730:intron 20.0%
!! TCAAAAACTTAAAAGTTGAA+AGG + chr7_4:60217610-60217629 None:intergenic 20.0%
!!! TTTTAAGTTTTTGACAATTC+TGG - chr7_4:60217616-60217635 Msa1167730:intron 20.0%
!!! ACACAGGTTTTATTATAAGT+GGG + chr7_4:60211902-60211921 None:intergenic 25.0%
! ACTTATAATAAAACCTGTGT+GGG - chr7_4:60211902-60211921 Msa1167730:three_prime_UTR 25.0%
! TGTTTATGTTTCTCCATATA+TGG - chr7_4:60212691-60212710 Msa1167730:CDS 25.0%
! TTAAGAGTTTCAAATTGAAG+CGG - chr7_4:60212728-60212747 Msa1167730:CDS 25.0%
!! TCTTTAAGCTTTAGCTTAAT+AGG - chr7_4:60212778-60212797 Msa1167730:CDS 25.0%
! TAAGTTAATCCAAACATACT+CGG + chr7_4:60212855-60212874 None:intergenic 25.0%
!! AGTTTGACACTATTTTATCT+TGG - chr7_4:60212962-60212981 Msa1167730:intron 25.0%
!! GTTTGACACTATTTTATCTT+GGG - chr7_4:60212963-60212982 Msa1167730:intron 25.0%
! CTCAATTGTTTGAATTTACA+TGG + chr7_4:60213161-60213180 None:intergenic 25.0%
! TATTATTACCCAAATCTTGA+GGG + chr7_4:60213263-60213282 None:intergenic 25.0%
! TTATTATTACCCAAATCTTG+AGG + chr7_4:60213264-60213283 None:intergenic 25.0%
! AGATTTGGGTAATAATAAGA+CGG - chr7_4:60213266-60213285 Msa1167730:CDS 25.0%
! AAATGATAGGTTATATGACA+AGG + chr7_4:60213399-60213418 None:intergenic 25.0%
! TGAAGCATGTATTAAATGAT+AGG + chr7_4:60213412-60213431 None:intergenic 25.0%
! AACATTCCATGTATATTTCA+TGG - chr7_4:60213436-60213455 Msa1167730:CDS 25.0%
! ACATTCCATGTATATTTCAT+GGG - chr7_4:60213437-60213456 Msa1167730:CDS 25.0%
!!! ACATGAATCACTTTTGTTTT+AGG - chr7_4:60213728-60213747 Msa1167730:CDS 25.0%
!!! CATGAATCACTTTTGTTTTA+GGG - chr7_4:60213729-60213748 Msa1167730:CDS 25.0%
! AAGTTGGATATTGAAGAAAA+TGG + chr7_4:60213956-60213975 None:intergenic 25.0%
!! CCAGTTTAAAATGATAAAGT+TGG + chr7_4:60213972-60213991 None:intergenic 25.0%
!! CCAACTTTATCATTTTAAAC+TGG - chr7_4:60213969-60213988 Msa1167730:CDS 25.0%
! TTATTTGTATTCATTGGAGA+TGG - chr7_4:60214075-60214094 Msa1167730:CDS 25.0%
! TTATTACCTATTCCTAGTTA+TGG + chr7_4:60214138-60214157 None:intergenic 25.0%
! AAATTGAAAAGGTGAAAAAG+AGG - chr7_4:60214300-60214319 Msa1167730:intron 25.0%
!! TTTAAACATGAGTCTAAGAT+TGG - chr7_4:60214503-60214522 Msa1167730:intron 25.0%
!!! TTTGTTGTTCTTGTCTAATA+TGG - chr7_4:60214658-60214677 Msa1167730:intron 25.0%
! GAAACTTAGGGATTAAATAA+AGG + chr7_4:60214808-60214827 None:intergenic 25.0%
!!! TTTGTTGTTCTTGTCTAATA+TGG - chr7_4:60214658-60214677 Msa1167730:intron 25.0%
!!! AGTTATTTTCTTTTAACCAC+GGG - chr7_4:60214930-60214949 Msa1167730:CDS 25.0%
! TGACATAAGTGTTAGATTAA+TGG - chr7_4:60215021-60215040 Msa1167730:intron 25.0%
! TTGCATAATTAAACAGCTTT+AGG + chr7_4:60215428-60215447 None:intergenic 25.0%
! AATGATTTGATATATGGTAC+AGG - chr7_4:60215481-60215500 Msa1167730:intron 25.0%
! ATGATTTGATATATGGTACA+GGG - chr7_4:60215482-60215501 Msa1167730:intron 25.0%
!!! CATTTATGTTGTTTCAGATA+CGG + chr7_4:60215660-60215679 None:intergenic 25.0%
!!! CTCAAAAAGTGCTTATATTT+AGG + chr7_4:60215821-60215840 None:intergenic 25.0%
!! GCATCTGATAATTTGTATAA+GGG + chr7_4:60215869-60215888 None:intergenic 25.0%
!! TGCATCTGATAATTTGTATA+AGG + chr7_4:60215870-60215889 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr7_4:60215908-60215927 None:intergenic 25.0%
! ACACAAAATACTACAAACAA+AGG - chr7_4:60216004-60216023 Msa1167730:intron 25.0%
! GTGTTGCATAAAACAATAAA+CGG + chr7_4:60216192-60216211 None:intergenic 25.0%
!!! ATTGTTTTATGCAACACATT+TGG - chr7_4:60216195-60216214 Msa1167730:intron 25.0%
!! TCAAATATAGGCTTGTTTAA+AGG - chr7_4:60216643-60216662 Msa1167730:intron 25.0%
! CGCGTGATTATTAAATTTAA+TGG - chr7_4:60217066-60217085 Msa1167730:intron 25.0%
! AACTCTAAATTATCTTCAGA+TGG + chr7_4:60217215-60217234 None:intergenic 25.0%
! TAGAAAATATGCTGTTAGAT+AGG - chr7_4:60217359-60217378 Msa1167730:intron 25.0%
!! AGGTTAGCTCATAAAAAAAT+AGG - chr7_4:60217379-60217398 Msa1167730:intron 25.0%
! AAAGAGGTAATTGAAGAATA+TGG + chr7_4:60217489-60217508 None:intergenic 25.0%
! TTGACAATTCTGGTAAATAT+TGG - chr7_4:60217626-60217645 Msa1167730:intron 25.0%
! AGACTTACTATATCTTCATA+TGG + chr7_4:60217909-60217928 None:intergenic 25.0%
! TAATAGTTAGTGTGTTATGT+CGG + chr7_4:60217953-60217972 None:intergenic 25.0%
! ATTGCCTGATATGAAATTAT+CGG + chr7_4:60218138-60218157 None:intergenic 25.0%
!! CACGTATTTGCTAAAAAAAA+TGG + chr7_4:60218216-60218235 None:intergenic 25.0%
!! ATTTCAAACAGTAGATTTTG+TGG + chr7_4:60218257-60218276 None:intergenic 25.0%
!! AAAATCTACTGTTTGAAATG+TGG - chr7_4:60218258-60218277 Msa1167730:intron 25.0%
! TTAGATCAAATCACAATCAT+GGG + chr7_4:60218328-60218347 None:intergenic 25.0%
! TTTAGATCAAATCACAATCA+TGG + chr7_4:60218329-60218348 None:intergenic 25.0%
! TGCACTAATTAACTAGTATA+TGG + chr7_4:60218374-60218393 None:intergenic 25.0%
! ATTCTTATCGAGTATATTCT+AGG + chr7_4:60218415-60218434 None:intergenic 25.0%
! AGAATTATTGCATATTCGTA+TGG - chr7_4:60218528-60218547 Msa1167730:five_prime_UTR 25.0%
! TCGTATGGATAATAACAAAA+AGG - chr7_4:60218543-60218562 Msa1167730:five_prime_UTR 25.0%
! CGTATGGATAATAACAAAAA+GGG - chr7_4:60218544-60218563 Msa1167730:five_prime_UTR 25.0%
!!! CACACAGGTTTTATTATAAG+TGG + chr7_4:60211903-60211922 None:intergenic 30.0%
CACTTATAATAAAACCTGTG+TGG - chr7_4:60211901-60211920 Msa1167730:three_prime_UTR 30.0%
CTTATAATAAAACCTGTGTG+GGG - chr7_4:60211903-60211922 Msa1167730:three_prime_UTR 30.0%
TTGAATCATCATCTGAATCT+CGG + chr7_4:60212087-60212106 None:intergenic 30.0%
ATTGAAGACGAATACAGTAT+CGG - chr7_4:60212315-60212334 Msa1167730:three_prime_UTR 30.0%
TCCAATGATTCTAATCCATT+TGG - chr7_4:60212343-60212362 Msa1167730:CDS 30.0%
!! ACCAAATGGATTAGAATCAT+TGG + chr7_4:60212347-60212366 None:intergenic 30.0%
TTGAGATTAGTATCACCAAA+TGG + chr7_4:60212361-60212380 None:intergenic 30.0%
AGAAGAAAAGACAAGTAGAA+AGG - chr7_4:60212627-60212646 Msa1167730:CDS 30.0%
TTCAGAACACTAACCATATA+TGG + chr7_4:60212707-60212726 None:intergenic 30.0%
ATTTCATACAAGCATGACAT+AGG - chr7_4:60212812-60212831 Msa1167730:intron 30.0%
AAGTTAATCCAAACATACTC+GGG + chr7_4:60212854-60212873 None:intergenic 30.0%
ACTTATTTGAGCTTATCTAC+TGG - chr7_4:60212870-60212889 Msa1167730:intron 30.0%
CTTATTTGAGCTTATCTACT+GGG - chr7_4:60212871-60212890 Msa1167730:intron 30.0%
TATAAGCTGTTTATCCAAAC+AGG - chr7_4:60213031-60213050 Msa1167730:intron 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr7_4:60213032-60213051 Msa1167730:intron 30.0%
ATTATTACCCAAATCTTGAG+GGG + chr7_4:60213262-60213281 None:intergenic 30.0%
CATTCCATGTATATTTCATG+GGG - chr7_4:60213438-60213457 Msa1167730:CDS 30.0%
! GAATAATTTGTATACGGACT+TGG - chr7_4:60213526-60213545 Msa1167730:CDS 30.0%
!!! TTTGTTTTAGGGTTTGAAAG+TGG - chr7_4:60213740-60213759 Msa1167730:CDS 30.0%
AGTCTATTGAAACCATAACT+AGG - chr7_4:60214123-60214142 Msa1167730:CDS 30.0%
TTGAAACCATAACTAGGAAT+AGG - chr7_4:60214129-60214148 Msa1167730:CDS 30.0%
!! GCTATTCATTAGTCTTCTTT+AGG - chr7_4:60214165-60214184 Msa1167730:CDS 30.0%
!! TCATTAGTCTTCTTTAGGTA+AGG - chr7_4:60214170-60214189 Msa1167730:CDS 30.0%
TGTTCTCTCAATTACAATAC+AGG - chr7_4:60214274-60214293 Msa1167730:intron 30.0%
AATACAGGCAGAAATTGAAA+AGG - chr7_4:60214289-60214308 Msa1167730:intron 30.0%
CTAACAACAAATAATGAGAG+AGG + chr7_4:60214377-60214396 None:intergenic 30.0%
GAAACTTAGGGATTAGATAA+AGG + chr7_4:60214579-60214598 None:intergenic 30.0%
TACATAGCAGTTCTTGTATT+TGG - chr7_4:60214701-60214720 Msa1167730:intron 30.0%
ACATAGCAGTTCTTGTATTT+GGG - chr7_4:60214702-60214721 Msa1167730:intron 30.0%
!!! TAGACACCAATCTTTTTTGT+AGG + chr7_4:60214741-60214760 None:intergenic 30.0%
!!! ATTTTGAGGCCCAAATATAA+TGG - chr7_4:60214973-60214992 Msa1167730:intron 30.0%
TGCACATTGCCATTATATTT+GGG + chr7_4:60214985-60215004 None:intergenic 30.0%
TTGCACATTGCCATTATATT+TGG + chr7_4:60214986-60215005 None:intergenic 30.0%
AAATATAATGGCAATGTGCA+AGG - chr7_4:60214985-60215004 Msa1167730:intron 30.0%
AATATAATGGCAATGTGCAA+GGG - chr7_4:60214986-60215005 Msa1167730:intron 30.0%
TTTGACAAATTCTTTCTTCC+AGG - chr7_4:60215072-60215091 Msa1167730:intron 30.0%
AAATGGAACTGCAGATTAAT+CGG + chr7_4:60215228-60215247 None:intergenic 30.0%
TGACTTTGCTTTGATCAAAA+TGG + chr7_4:60215245-60215264 None:intergenic 30.0%
!! ATTTTGATCAAAGCAAAGTC+AGG - chr7_4:60215244-60215263 Msa1167730:intron 30.0%
TTTACCTTGAAGACCATATA+TGG + chr7_4:60215366-60215385 None:intergenic 30.0%
! CGTATCTGAAACAACATAAA+TGG - chr7_4:60215658-60215677 Msa1167730:intron 30.0%
! AAAGTGCTTATATTTAGGGA+CGG + chr7_4:60215816-60215835 None:intergenic 30.0%
! ATCCTTTGTTTGTAGTACTT+TGG + chr7_4:60215967-60215986 None:intergenic 30.0%
! TGTTTGTAGTATTTTGTGTG+TGG + chr7_4:60216003-60216022 None:intergenic 30.0%
!!! GAGGGAGTAAATATTTTAGT+TGG - chr7_4:60216126-60216145 Msa1167730:CDS 30.0%
!! TCTTAACTAAGCTTTGAAGA+AGG + chr7_4:60216236-60216255 None:intergenic 30.0%
!!! TATGTGGAGGTGTTTTAAAA+TGG + chr7_4:60216533-60216552 None:intergenic 30.0%
TAATGTGATGAAGAATACCT+TGG + chr7_4:60216563-60216582 None:intergenic 30.0%
! AAGGCATCTGAAAGAATAAA+AGG + chr7_4:60216590-60216609 None:intergenic 30.0%
ATTAGAGGATGAAGATAAAC+CGG - chr7_4:60216715-60216734 Msa1167730:intron 30.0%
AAAATGATTCATCAGCAGAA+CGG + chr7_4:60216912-60216931 None:intergenic 30.0%
!! TTGAAAGCCTTTAAAGCTAT+GGG - chr7_4:60217233-60217252 Msa1167730:intron 30.0%
AAATATTGGAGCAGGTTTAT+TGG - chr7_4:60217640-60217659 Msa1167730:intron 30.0%
ATATTTGTTCCACTCATATC+CGG + chr7_4:60217718-60217737 None:intergenic 30.0%
TTTATCTTGTCTACAAGATC+AGG + chr7_4:60217813-60217832 None:intergenic 30.0%
TCTTTCTCTATAGTGTAGTT+CGG + chr7_4:60217840-60217859 None:intergenic 30.0%
AACTACACTATAGAGAAAGA+CGG - chr7_4:60217840-60217859 Msa1167730:CDS 30.0%
CTTACTATATCTTCATATGG+TGG + chr7_4:60217906-60217925 None:intergenic 30.0%
GATAATTTCATATCAGGCAA+TGG - chr7_4:60218137-60218156 Msa1167730:CDS 30.0%
!! TGCTCCTTTAGAATTTATCT+TGG + chr7_4:60218284-60218303 None:intergenic 30.0%
! AGATAAATTCTAAAGGAGCA+TGG - chr7_4:60218284-60218303 Msa1167730:CDS 30.0%
! TTATCGAGTATATTCTAGGA+AGG + chr7_4:60218411-60218430 None:intergenic 30.0%
AGAGGAAATTTCACAGTACA+TGG - chr7_4:60212165-60212184 Msa1167730:three_prime_UTR 35.0%
TTGAAGACGAATACAGTATC+GGG - chr7_4:60212316-60212335 Msa1167730:three_prime_UTR 35.0%
! CTTCTCAGCTTTAACAGAAA+AGG + chr7_4:60212612-60212631 None:intergenic 35.0%
GAAAAGACAAGTAGAAAGGA+TGG - chr7_4:60212631-60212650 Msa1167730:CDS 35.0%
GTTTCAAATTGAAGCGGAAT+CGG - chr7_4:60212734-60212753 Msa1167730:CDS 35.0%
! GCTTTAGCTTAATAGGTGAT+AGG - chr7_4:60212785-60212804 Msa1167730:CDS 35.0%
AACAATAACCCGAGTATGTT+TGG - chr7_4:60212843-60212862 Msa1167730:intron 35.0%
TTGTGAGTTGTGACATTGTT+TGG - chr7_4:60212902-60212921 Msa1167730:intron 35.0%
TGTGAGTTGTGACATTGTTT+GGG - chr7_4:60212903-60212922 Msa1167730:intron 35.0%
TTCATAAGCGCTTATGCTAT+TGG - chr7_4:60213002-60213021 Msa1167730:intron 35.0%
TGTTTATCCAAACAGGGTTT+AGG - chr7_4:60213038-60213057 Msa1167730:intron 35.0%
AGCAGTATGATTAGTAGAGT+GGG + chr7_4:60213102-60213121 None:intergenic 35.0%
GATGGTCTAGGTATTTAAAG+TGG + chr7_4:60213211-60213230 None:intergenic 35.0%
AACATTTGCATAGATGGTCT+AGG + chr7_4:60213223-60213242 None:intergenic 35.0%
CGTCAAAACATTTGCATAGA+TGG + chr7_4:60213229-60213248 None:intergenic 35.0%
TTATTACCCAAATCTTGAGG+GGG + chr7_4:60213261-60213280 None:intergenic 35.0%
TCATCTTACTAACACTACTC+TGG - chr7_4:60213301-60213320 Msa1167730:CDS 35.0%
CCTACTGTTGGAAAATATGT+AGG + chr7_4:60213368-60213387 None:intergenic 35.0%
! CCTACATATTTTCCAACAGT+AGG - chr7_4:60213365-60213384 Msa1167730:intron 35.0%
AAGGTTAACATTCCTACTGT+TGG + chr7_4:60213380-60213399 None:intergenic 35.0%
CATGTATATTTCATGGGGAA+GGG - chr7_4:60213443-60213462 Msa1167730:CDS 35.0%
!! CTCTGCTTTGATTTTACGTT+AGG - chr7_4:60213480-60213499 Msa1167730:CDS 35.0%
TTTACGTTAGGACATGACAA+TGG - chr7_4:60213492-60213511 Msa1167730:CDS 35.0%
! GGGTCGGAATAATTTGTATA+CGG - chr7_4:60213520-60213539 Msa1167730:CDS 35.0%
TTTGAAAGTGGTACACAAAC+AGG - chr7_4:60213752-60213771 Msa1167730:CDS 35.0%
TCATTTCTGTAGTACGTGTT+AGG - chr7_4:60213798-60213817 Msa1167730:CDS 35.0%
GGCAACATTAATAGGAACTT+GGG + chr7_4:60213840-60213859 None:intergenic 35.0%
AGGCAACATTAATAGGAACT+TGG + chr7_4:60213841-60213860 None:intergenic 35.0%
AAACCAGAGGCAACATTAAT+AGG + chr7_4:60213848-60213867 None:intergenic 35.0%
AAGTGCAGGGATTAAATGAA+TGG + chr7_4:60213900-60213919 None:intergenic 35.0%
!! AACAGTTTTCAGAAAGTGCA+GGG + chr7_4:60213913-60213932 None:intergenic 35.0%
!! AAACAGTTTTCAGAAAGTGC+AGG + chr7_4:60213914-60213933 None:intergenic 35.0%
TAATTCGGAATAAGTGCAGA+AGG + chr7_4:60214054-60214073 None:intergenic 35.0%
TTGTATTCATTGGAGATGGT+TGG - chr7_4:60214079-60214098 Msa1167730:CDS 35.0%
TGTATTCATTGGAGATGGTT+GGG - chr7_4:60214080-60214099 Msa1167730:CDS 35.0%
AGCACAACATGAAGAAGAAA+TGG - chr7_4:60214346-60214365 Msa1167730:intron 35.0%
ATGGCATACCAATTATGTCA+AGG - chr7_4:60214677-60214696 Msa1167730:intron 35.0%
! CTATGTAGCCTTGACATAAT+TGG + chr7_4:60214688-60214707 None:intergenic 35.0%
CATAGCAGTTCTTGTATTTG+GGG - chr7_4:60214703-60214722 Msa1167730:intron 35.0%
ATAGCAGTTCTTGTATTTGG+GGG - chr7_4:60214704-60214723 Msa1167730:intron 35.0%
TGCAAGCCTACAAAAAAGAT+TGG - chr7_4:60214732-60214751 Msa1167730:intron 35.0%
! CTTTTTGTAGGCGACATAAT+TGG + chr7_4:60214912-60214931 None:intergenic 35.0%
ATATTTGGGCCTCAAAATAC+CGG + chr7_4:60214971-60214990 None:intergenic 35.0%
TGAACCATATATGGTCTTCA+AGG - chr7_4:60215359-60215378 Msa1167730:CDS 35.0%
ATATATGGTACAGGGTTTGA+CGG - chr7_4:60215490-60215509 Msa1167730:intron 35.0%
AAACAACATAAATGGCAACC+CGG - chr7_4:60215666-60215685 Msa1167730:intron 35.0%
TTCAGATACACCAAATGGTA+AGG + chr7_4:60215759-60215778 None:intergenic 35.0%
! GTTGTTTCAGATACACCAAA+TGG + chr7_4:60215764-60215783 None:intergenic 35.0%
! CACCAAAGTACTACAAACAA+AGG - chr7_4:60215962-60215981 Msa1167730:intron 35.0%
GAAATGTGAAAAAGGCAAAG+CGG - chr7_4:60216086-60216105 Msa1167730:intron 35.0%
AAATGTGAAAAAGGCAAAGC+GGG - chr7_4:60216087-60216106 Msa1167730:intron 35.0%
TATTGGTCACAACTTCATGT+AGG - chr7_4:60216258-60216277 Msa1167730:intron 35.0%
TACGTGTCTTTCCATGTAAA+AGG + chr7_4:60216432-60216451 None:intergenic 35.0%
AAAACACCTCCACATATACA+AGG - chr7_4:60216537-60216556 Msa1167730:intron 35.0%
!! GCTTACGTAACATTTTAGCA+TGG + chr7_4:60216673-60216692 None:intergenic 35.0%
GGTTTATCTTCATCCTCTAA+TGG + chr7_4:60216716-60216735 None:intergenic 35.0%
AGTAAGGATGAAGACAAAGA+TGG + chr7_4:60216856-60216875 None:intergenic 35.0%
GCTTCTTGATTCTCTCTAAT+GGG + chr7_4:60216943-60216962 None:intergenic 35.0%
AGCTTCTTGATTCTCTCTAA+TGG + chr7_4:60216944-60216963 None:intergenic 35.0%
! GTTGCATGATGATGAAAATG+AGG - chr7_4:60216996-60217015 Msa1167730:intron 35.0%
!!! TATTTTGGTACGTATAGGAG+CGG - chr7_4:60217123-60217142 Msa1167730:intron 35.0%
AAAACGAATTCAGGAAGCAA+TGG - chr7_4:60217175-60217194 Msa1167730:intron 35.0%
AAATTATCTTCAGATGGAGC+TGG + chr7_4:60217209-60217228 None:intergenic 35.0%
!! GTTGAAAGCCTTTAAAGCTA+TGG - chr7_4:60217232-60217251 Msa1167730:intron 35.0%
TTCGGAGAAGTTATAAGTTG+TGG - chr7_4:60217411-60217430 Msa1167730:intron 35.0%
GTTGTGGATAAGTATCATAG+AGG - chr7_4:60217427-60217446 Msa1167730:intron 35.0%
ATTCTGGTAAATATTGGAGC+AGG - chr7_4:60217632-60217651 Msa1167730:intron 35.0%
! TTGAAATACTTTGGCTTCCT+TGG + chr7_4:60217684-60217703 None:intergenic 35.0%
TGAACACGGTTGAAATACTT+TGG + chr7_4:60217693-60217712 None:intergenic 35.0%
TTTCTCTATAGTGTAGTTCG+GGG + chr7_4:60217838-60217857 None:intergenic 35.0%
CTTTCTCTATAGTGTAGTTC+GGG + chr7_4:60217839-60217858 None:intergenic 35.0%
TGCATTATTAGATTCCATGC+AGG - chr7_4:60217879-60217898 Msa1167730:CDS 35.0%
TCCGCATTGTAAACAAAGAA+TGG - chr7_4:60218026-60218045 Msa1167730:intron 35.0%
! CCCATTCTTTGTTTACAATG+CGG + chr7_4:60218030-60218049 None:intergenic 35.0%
CCGCATTGTAAACAAAGAAT+GGG - chr7_4:60218027-60218046 Msa1167730:intron 35.0%
TTTAAATGCACATTCGAACG+TGG - chr7_4:60218070-60218089 Msa1167730:intron 35.0%
!!! TAGCTTCTCCTTTTGATTTG+AGG - chr7_4:60218173-60218192 Msa1167730:intron 35.0%
!!! AGCTTCTCCTTTTGATTTGA+GGG - chr7_4:60218174-60218193 Msa1167730:intron 35.0%
GTGGCCAAGATAAATTCTAA+AGG - chr7_4:60218277-60218296 Msa1167730:CDS 35.0%
GTTAATTAGTGCATTCCGTA+TGG - chr7_4:60218381-60218400 Msa1167730:CDS 35.0%
TCAGATTAACAACATCGCCA+AGG - chr7_4:60211940-60211959 Msa1167730:three_prime_UTR 40.0%
CAGATTAACAACATCGCCAA+GGG - chr7_4:60211941-60211960 Msa1167730:three_prime_UTR 40.0%
CATTGTTTAACCCTAACCCT+TGG + chr7_4:60211960-60211979 None:intergenic 40.0%
CAAGGGTTAGGGTTAAACAA+TGG - chr7_4:60211958-60211977 Msa1167730:three_prime_UTR 40.0%
ATCAGATGCAGAGTCATCAT+CGG + chr7_4:60212023-60212042 None:intergenic 40.0%
GACGACAACGATAATAGAAC+TGG - chr7_4:60212109-60212128 Msa1167730:three_prime_UTR 40.0%
TTCCAGAACAATCACAGAAG+AGG - chr7_4:60212147-60212166 Msa1167730:three_prime_UTR 40.0%
TTCCTCTTCTGTGATTGTTC+TGG + chr7_4:60212152-60212171 None:intergenic 40.0%
GGCTAAAAAAGCTCAGAGAA+AGG - chr7_4:60212186-60212205 Msa1167730:three_prime_UTR 40.0%
CAGCAGTATGATTAGTAGAG+TGG + chr7_4:60213103-60213122 None:intergenic 40.0%
CACTCTACTAATCATACTGC+TGG - chr7_4:60213101-60213120 Msa1167730:intron 40.0%
ACACTCGTTCTTTAAACCTC+AGG - chr7_4:60213127-60213146 Msa1167730:intron 40.0%
TTCTAACCCCCTCAAGATTT+GGG - chr7_4:60213252-60213271 Msa1167730:CDS 40.0%
CCTTCCCCATGAAATATACA+TGG + chr7_4:60213445-60213464 None:intergenic 40.0%
CCATGTATATTTCATGGGGA+AGG - chr7_4:60213442-60213461 Msa1167730:CDS 40.0%
TGTAGTACGTGTTAGGTACT+TGG - chr7_4:60213805-60213824 Msa1167730:CDS 40.0%
GTTCCTATTAATGTTGCCTC+TGG - chr7_4:60213842-60213861 Msa1167730:intron 40.0%
!! GTCCTGTGATTTGTTGCTAA+TGG - chr7_4:60214226-60214245 Msa1167730:intron 40.0%
GCAACGAACATTTAGTTGTC+AGG + chr7_4:60214252-60214271 None:intergenic 40.0%
AAAGGTGAAAAAGAGGAGAG+AGG - chr7_4:60214307-60214326 Msa1167730:intron 40.0%
TGAAAAAGAGGAGAGAGGAA+AGG - chr7_4:60214312-60214331 Msa1167730:intron 40.0%
GAAAAAGAGGAGAGAGGAAA+GGG - chr7_4:60214313-60214332 Msa1167730:intron 40.0%
!! ATTAGTCTTAGCTGTCCTAG+TGG - chr7_4:60214440-60214459 Msa1167730:intron 40.0%
GAAAGTCTTCTATCTAGCGA+AGG - chr7_4:60214629-60214648 Msa1167730:intron 40.0%
TAGCAGTTCTTGTATTTGGG+GGG - chr7_4:60214705-60214724 Msa1167730:intron 40.0%
GAAAGTCTTCTATCTAGCGA+AGG - chr7_4:60214629-60214648 Msa1167730:intron 40.0%
! TTCAACTTCCCGGTATTTTG+AGG - chr7_4:60214959-60214978 Msa1167730:CDS 40.0%
TATTTGGGCCTCAAAATACC+GGG + chr7_4:60214970-60214989 None:intergenic 40.0%
TCAGAGATTAGATTGCGTGA+AGG - chr7_4:60215267-60215286 Msa1167730:intron 40.0%
CAGAGATTAGATTGCGTGAA+GGG - chr7_4:60215268-60215287 Msa1167730:intron 40.0%
TGCTTGGTTAGGACATCAAT+TGG + chr7_4:60215303-60215322 None:intergenic 40.0%
!! TCTCAATGGCTCTGATGATT+TGG - chr7_4:60215323-60215342 Msa1167730:intron 40.0%
TGACGACATCAAAATGCATC+TGG - chr7_4:60215535-60215554 Msa1167730:intron 40.0%
AAATGCATCTGGATCTTGAC+AGG - chr7_4:60215546-60215565 Msa1167730:intron 40.0%
AATGCATCTGGATCTTGACA+GGG - chr7_4:60215547-60215566 Msa1167730:intron 40.0%
ACCAACCCATGTGGAATATT+GGG - chr7_4:60215574-60215593 Msa1167730:intron 40.0%
TACCTCCCAATATTCCACAT+GGG + chr7_4:60215582-60215601 None:intergenic 40.0%
ATACCTCCCAATATTCCACA+TGG + chr7_4:60215583-60215602 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr7_4:60215733-60215752 None:intergenic 40.0%
TGCTTATATTTAGGGACGGA+GGG + chr7_4:60215812-60215831 None:intergenic 40.0%
!! GCAAAGCGGGCTTTTATATA+GGG - chr7_4:60216100-60216119 Msa1167730:intron 40.0%
TGCAACACATTTGGCCATTA+TGG - chr7_4:60216204-60216223 Msa1167730:intron 40.0%
ACACATTTGGCCATTATGGT+CGG - chr7_4:60216208-60216227 Msa1167730:intron 40.0%
GCTAGCTGAATCTCGAAAAA+AGG - chr7_4:60216306-60216325 Msa1167730:intron 40.0%
TGTAAAAGGTCCTTCACATC+TGG + chr7_4:60216418-60216437 None:intergenic 40.0%
! GATGTGAAGGACCTTTTACA+TGG - chr7_4:60216418-60216437 Msa1167730:intron 40.0%
!! ATACCTTGGCCTTGTATATG+TGG + chr7_4:60216549-60216568 None:intergenic 40.0%
CATCCTTACTGAAATGTGCT+TGG - chr7_4:60216866-60216885 Msa1167730:intron 40.0%
ACACCAAGCACATTTCAGTA+AGG + chr7_4:60216872-60216891 None:intergenic 40.0%
!! ATGTGCTTGGTGTTTCTCTA+TGG - chr7_4:60216879-60216898 Msa1167730:intron 40.0%
GAATCAAGAAGCTGAAGATG+AGG - chr7_4:60216951-60216970 Msa1167730:intron 40.0%
TCATCATCATGCAACAGTTG+TGG + chr7_4:60216991-60217010 None:intergenic 40.0%
!! AGTATAGCTTTGTCCTCTTC+AGG + chr7_4:60217033-60217052 None:intergenic 40.0%
TGAAGAGGACAAAGCTATAC+TGG - chr7_4:60217032-60217051 Msa1167730:intron 40.0%
AGAGCAGCAAAAACGAATTC+AGG - chr7_4:60217166-60217185 Msa1167730:intron 40.0%
GAAACAATACCTGTGAATCG+AGG + chr7_4:60217307-60217326 None:intergenic 40.0%
!! CCAACTTTTAAGGAGGAAAG+AGG + chr7_4:60217505-60217524 None:intergenic 40.0%
CCTCTTTCCTCCTTAAAAGT+TGG - chr7_4:60217502-60217521 Msa1167730:intron 40.0%
!! TCTAGTGCCAACTTTTAAGG+AGG + chr7_4:60217512-60217531 None:intergenic 40.0%
! GCATCTAGTGCCAACTTTTA+AGG + chr7_4:60217515-60217534 None:intergenic 40.0%
TATTGGAGCAGGTTTATTGG+TGG - chr7_4:60217643-60217662 Msa1167730:intron 40.0%
TATTTCAACCGTGTTCACAC+CGG - chr7_4:60217696-60217715 Msa1167730:intron 40.0%
TGTCATGATCATAGTGAGTC+TGG + chr7_4:60217743-60217762 None:intergenic 40.0%
TTGTACCCTTGCACAATCTT+TGG + chr7_4:60217774-60217793 None:intergenic 40.0%
TACACTATAGAGAAAGACGG+CGG - chr7_4:60217843-60217862 Msa1167730:CDS 40.0%
TAGTTAGTGTGTTATGTCGG+TGG + chr7_4:60217950-60217969 None:intergenic 40.0%
TGGGAATACTCTCACAAGAA+AGG - chr7_4:60218046-60218065 Msa1167730:intron 40.0%
TATGAAATTATCGGCGGTAG+CGG + chr7_4:60218129-60218148 None:intergenic 40.0%
ACCGCCGATAATTTCATATC+AGG - chr7_4:60218131-60218150 Msa1167730:CDS 40.0%
GCCTGATATGAAATTATCGG+CGG + chr7_4:60218135-60218154 None:intergenic 40.0%
ACAGCTTCCCTCAAATCAAA+AGG + chr7_4:60218184-60218203 None:intergenic 40.0%
! TTCTAGGAAGGAACACCATA+CGG + chr7_4:60218399-60218418 None:intergenic 40.0%
ACTCGATAAGAATCTCGAGA+TGG - chr7_4:60218422-60218441 Msa1167730:CDS 40.0%
CTCGATAAGAATCTCGAGAT+GGG - chr7_4:60218423-60218442 Msa1167730:CDS 40.0%
TCAATCGAATTTCCCCACAC+AGG + chr7_4:60211918-60211937 None:intergenic 45.0%
TAACAACATCGCCAAGGGTT+AGG - chr7_4:60211946-60211965 Msa1167730:three_prime_UTR 45.0%
AACAACATCGCCAAGGGTTA+GGG - chr7_4:60211947-60211966 Msa1167730:three_prime_UTR 45.0%
TAGGGTTAAACAATGGCGAG+CGG - chr7_4:60211965-60211984 Msa1167730:three_prime_UTR 45.0%
ATTGAGCGCGATGTTACTCA+AGG - chr7_4:60212572-60212591 Msa1167730:CDS 45.0%
CAACAGACCTAAACCCTGTT+TGG + chr7_4:60213048-60213067 None:intergenic 45.0%
CAAACAGGGTTTAGGTCTGT+TGG - chr7_4:60213046-60213065 Msa1167730:intron 45.0%
TTACATGGGACATGTTCCTG+AGG + chr7_4:60213146-60213165 None:intergenic 45.0%
CTTCTAACCCCCTCAAGATT+TGG - chr7_4:60213251-60213270 Msa1167730:CDS 45.0%
CGTTAGGACATGACAATGGT+TGG - chr7_4:60213496-60213515 Msa1167730:CDS 45.0%
TAGGACATGACAATGGTTGG+TGG - chr7_4:60213499-60213518 Msa1167730:CDS 45.0%
AGGACATGACAATGGTTGGT+GGG - chr7_4:60213500-60213519 Msa1167730:CDS 45.0%
TTCATTGGAGATGGTTGGGT+TGG - chr7_4:60214084-60214103 Msa1167730:CDS 45.0%
TCATTGGAGATGGTTGGGTT+GGG - chr7_4:60214085-60214104 Msa1167730:CDS 45.0%
GGCCATTAGCAACAAATCAC+AGG + chr7_4:60214231-60214250 None:intergenic 45.0%
CATAGTAACACACTGCCACT+AGG + chr7_4:60214458-60214477 None:intergenic 45.0%
GGAAGTTGAATTATAGCCCG+TGG + chr7_4:60214949-60214968 None:intergenic 45.0%
CGGGCTATAATTCAACTTCC+CGG - chr7_4:60214949-60214968 Msa1167730:CDS 45.0%
GTTCTCTAGCTAACAATGCC+TGG + chr7_4:60215093-60215112 None:intergenic 45.0%
GTTCCAGGACTGGGAAAAAA+AGG - chr7_4:60215126-60215145 Msa1167730:CDS 45.0%
!!! CTTCCTTTTTTTCCCAGTCC+TGG + chr7_4:60215132-60215151 None:intergenic 45.0%
GGACTGGGAAAAAAAGGAAG+AGG - chr7_4:60215132-60215151 Msa1167730:CDS 45.0%
CTGGGAAAAAAAGGAAGAGG+AGG - chr7_4:60215135-60215154 Msa1167730:CDS 45.0%
GTCCTAACCAAGCATCTCAA+TGG - chr7_4:60215309-60215328 Msa1167730:intron 45.0%
AGCCATTGAGATGCTTGGTT+AGG + chr7_4:60215314-60215333 None:intergenic 45.0%
ATCAGAGCCATTGAGATGCT+TGG + chr7_4:60215319-60215338 None:intergenic 45.0%
CACCAACCCATGTGGAATAT+TGG - chr7_4:60215573-60215592 Msa1167730:intron 45.0%
TCCCAATATTCCACATGGGT+TGG + chr7_4:60215578-60215597 None:intergenic 45.0%
AACCCATGTGGAATATTGGG+AGG - chr7_4:60215577-60215596 Msa1167730:intron 45.0%
CATGTGCAGAGCTCAAACAA+GGG + chr7_4:60215616-60215635 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr7_4:60215734-60215753 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr7_4:60215737-60215756 None:intergenic 45.0%
TTGTACGCAGCCTTACCATT+TGG - chr7_4:60215746-60215765 Msa1167730:intron 45.0%
GTGCTTATATTTAGGGACGG+AGG + chr7_4:60215813-60215832 None:intergenic 45.0%
!! GGCAAAGCGGGCTTTTATAT+AGG - chr7_4:60216099-60216118 Msa1167730:intron 45.0%
!! AGCGGGCTTTTATATAGGGA+CGG - chr7_4:60216104-60216123 Msa1167730:intron 45.0%
! GGCTTTTATATAGGGACGGA+GGG - chr7_4:60216108-60216127 Msa1167730:intron 45.0%
TCTCCTTGTGGTGTGTGATT+GGG - chr7_4:60216282-60216301 Msa1167730:intron 45.0%
AGGATGCAATTGATCGAGCT+AGG - chr7_4:60216326-60216345 Msa1167730:intron 45.0%
GGATGCAATTGATCGAGCTA+GGG - chr7_4:60216327-60216346 Msa1167730:intron 45.0%
! TGAGCTGCTTGCTGAACAAA+GGG - chr7_4:60216372-60216391 Msa1167730:intron 45.0%
TGGAAAGACACGTACAGAGT+TGG - chr7_4:60216438-60216457 Msa1167730:intron 45.0%
TACAGAGTTGGAAGCCTTAC+AGG - chr7_4:60216450-60216469 Msa1167730:intron 45.0%
TGACTCAATGTGAGCCTGTA+AGG + chr7_4:60216467-60216486 None:intergenic 45.0%
ATTGAGTCAGAGATGCGTAC+TGG - chr7_4:60216478-60216497 Msa1167730:intron 45.0%
AGCAAAGGTGGTTGAGTACT+GGG - chr7_4:60216504-60216523 Msa1167730:intron 45.0%
ACGTCTTGAGCAACCATTAG+AGG - chr7_4:60216700-60216719 Msa1167730:intron 45.0%
TGCTCTTGACATGATACCTG+AGG - chr7_4:60216742-60216761 Msa1167730:intron 45.0%
TCTTGACATGATACCTGAGG+AGG - chr7_4:60216745-60216764 Msa1167730:intron 45.0%
ATATACTGAGGAGGATGAGG+AGG - chr7_4:60216769-60216788 Msa1167730:intron 45.0%
!! TGATTCTCTCTAATGGGCTC+TGG + chr7_4:60216937-60216956 None:intergenic 45.0%
GGAAGCTATTGATCCTGAAG+AGG - chr7_4:60217017-60217036 Msa1167730:intron 45.0%
!! CATGGCTCCCATAGCTTTAA+AGG + chr7_4:60217243-60217262 None:intergenic 45.0%
!! CTTTAAAGCTATGGGAGCCA+TGG - chr7_4:60217241-60217260 Msa1167730:intron 45.0%
ACTCATATCCGGTGTGAACA+CGG + chr7_4:60217707-60217726 None:intergenic 45.0%
! CTTGCACAATCTTTGGAGGT+GGG + chr7_4:60217767-60217786 None:intergenic 45.0%
CACCTCCAAAGATTGTGCAA+GGG - chr7_4:60217766-60217785 Msa1167730:intron 45.0%
TACCCTTGCACAATCTTTGG+AGG + chr7_4:60217771-60217790 None:intergenic 45.0%
TTCCTTGTGTCTTCCATGAC+AGG - chr7_4:60218000-60218019 Msa1167730:intron 45.0%
TGATACCTAGGGATGACGAT+AGG - chr7_4:60218459-60218478 Msa1167730:CDS 45.0%
GATACCTAGGGATGACGATA+GGG - chr7_4:60218460-60218479 Msa1167730:CDS 45.0%
!! AAAAATTCAAATTATATATA+TGG + chr7_4:60217334-60217353 None:intergenic 5.0%
!!! TAATTTATTTTTATATTTGA+AGG - chr7_4:60217552-60217571 Msa1167730:intron 5.0%
!! CATGACAATGGTTGGTGGGT+CGG - chr7_4:60213504-60213523 Msa1167730:CDS 50.0%
! ATGTTGCCTCTGGTTTCGAC+TGG - chr7_4:60213852-60213871 Msa1167730:intron 50.0%
TGTACACCAGTCGAAACCAG+AGG + chr7_4:60213861-60213880 None:intergenic 50.0%
! CATTGGAGATGGTTGGGTTG+GGG - chr7_4:60214086-60214105 Msa1167730:CDS 50.0%
GGTTAGGACATCAATTGGCC+TGG + chr7_4:60215298-60215317 None:intergenic 50.0%
GCATGTGCAGAGCTCAAACA+AGG + chr7_4:60215617-60215636 None:intergenic 50.0%
! GGGCTTTTATATAGGGACGG+AGG - chr7_4:60216107-60216126 Msa1167730:intron 50.0%
!! GAAGAAGGTGCCGACCATAA+TGG + chr7_4:60216221-60216240 None:intergenic 50.0%
CTTCATGTAGGCTCTCCTTG+TGG - chr7_4:60216270-60216289 Msa1167730:intron 50.0%
CTCTCCTTGTGGTGTGTGAT+TGG - chr7_4:60216281-60216300 Msa1167730:intron 50.0%
! CTGAGCTGCTTGCTGAACAA+AGG - chr7_4:60216371-60216390 Msa1167730:intron 50.0%
! GAGCTGCTTGCTGAACAAAG+GGG - chr7_4:60216373-60216392 Msa1167730:intron 50.0%
! CTTCACATCTGGCTCAACAC+TGG + chr7_4:60216407-60216426 None:intergenic 50.0%
! CAGTGTTGAGCCAGATGTGA+AGG - chr7_4:60216405-60216424 Msa1167730:intron 50.0%
! GATGCGTACTGGTACAGCAA+AGG - chr7_4:60216489-60216508 Msa1167730:intron 50.0%
CAGCAAAGGTGGTTGAGTAC+TGG - chr7_4:60216503-60216522 Msa1167730:intron 50.0%
!! AAAGGTGGTTGAGTACTGGG+AGG - chr7_4:60216507-60216526 Msa1167730:intron 50.0%
!! CCTTGGCCTTGTATATGTGG+AGG + chr7_4:60216546-60216565 None:intergenic 50.0%
CCTCCACATATACAAGGCCA+AGG - chr7_4:60216543-60216562 Msa1167730:intron 50.0%
! ATCATGTCAAGAGCACGCTC+CGG + chr7_4:60216737-60216756 None:intergenic 50.0%
! ACCTGAGGAGGCATATACTG+AGG - chr7_4:60216757-60216776 Msa1167730:intron 50.0%
TCCTCAGTATATGCCTCCTC+AGG + chr7_4:60216761-60216780 None:intergenic 50.0%
! TGAGGAGGCATATACTGAGG+AGG - chr7_4:60216760-60216779 Msa1167730:intron 50.0%
GGCATATACTGAGGAGGATG+AGG - chr7_4:60216766-60216785 Msa1167730:intron 50.0%
GATGAGGAGGAGGATGCTAA+AGG - chr7_4:60216782-60216801 Msa1167730:intron 50.0%
CAAGAAGCTGAAGATGAGGC+TGG - chr7_4:60216955-60216974 Msa1167730:intron 50.0%
CGTATAGGAGCGGAAACGTA+TGG - chr7_4:60217133-60217152 Msa1167730:intron 50.0%
GCGGAAACGTATGGCTGTAA+TGG - chr7_4:60217142-60217161 Msa1167730:intron 50.0%
TAAAGCTATGGGAGCCATGG+AGG - chr7_4:60217244-60217263 Msa1167730:intron 50.0%
TGAAGTGAGCCTCGATTCAC+AGG - chr7_4:60217295-60217314 Msa1167730:intron 50.0%
GGCATGACAAGTACAGACCA+AGG - chr7_4:60217664-60217683 Msa1167730:intron 50.0%
GTGTTCACACCGGATATGAG+TGG - chr7_4:60217706-60217725 Msa1167730:intron 50.0%
! CCTTGCACAATCTTTGGAGG+TGG + chr7_4:60217768-60217787 None:intergenic 50.0%
CCACCTCCAAAGATTGTGCA+AGG - chr7_4:60217765-60217784 Msa1167730:intron 50.0%
ATAGAGAAAGACGGCGGCAA+TGG - chr7_4:60217849-60217868 Msa1167730:CDS 50.0%
TAGAGAAAGACGGCGGCAAT+GGG - chr7_4:60217850-60217869 Msa1167730:CDS 50.0%
CTTCATATGGTGGTCCTGCA+TGG + chr7_4:60217896-60217915 None:intergenic 50.0%
AGCCTGTCATGGAAGACACA+AGG + chr7_4:60218005-60218024 None:intergenic 50.0%
ACAATGCGGAAAGCCTGTCA+TGG + chr7_4:60218016-60218035 None:intergenic 50.0%
AATCTCGAGATGGGTCTCTC+CGG - chr7_4:60218432-60218451 Msa1167730:CDS 50.0%
!!! ACTAGTTTTCCGGCGGTGGT+CGG + chr7_4:60212053-60212072 None:intergenic 55.0%
!!! GTGACCGGCGACTAGTTTTC+CGG + chr7_4:60212063-60212082 None:intergenic 55.0%
CATCTGAATCTCGGCGTGAC+CGG + chr7_4:60212078-60212097 None:intergenic 55.0%
!! AGATGGTTGGGTTGGGGATC+TGG - chr7_4:60214092-60214111 Msa1167730:CDS 55.0%
TCGAGCTGAGTTCCAGGACT+GGG - chr7_4:60215117-60215136 Msa1167730:CDS 55.0%
GCTCCCAATCACACACCACA+AGG + chr7_4:60216288-60216307 None:intergenic 55.0%
ATTGATCGAGCTAGGGTGCG+TGG - chr7_4:60216334-60216353 Msa1167730:intron 55.0%
TGTTCAGCAAGCAGCTCAGC+AGG + chr7_4:60216370-60216389 None:intergenic 55.0%
! GCGTACTGGTACAGCAAAGG+TGG - chr7_4:60216492-60216511 Msa1167730:intron 55.0%
TACTGAGGAGGATGAGGAGG+AGG - chr7_4:60216772-60216791 Msa1167730:intron 55.0%
GAGGATGGAGACGCAGTGTT+TGG - chr7_4:60217263-60217282 Msa1167730:intron 55.0%
GGAGACGCAGTGTTTGGATC+TGG - chr7_4:60217269-60217288 Msa1167730:intron 55.0%
AGAGAAAGACGGCGGCAATG+GGG - chr7_4:60217851-60217870 Msa1167730:CDS 55.0%
! GAAATTATCGGCGGTAGCGG+TGG + chr7_4:60218126-60218145 None:intergenic 55.0%
TCTCCGGCGAGTGATACCTA+GGG - chr7_4:60218448-60218467 Msa1167730:CDS 55.0%
CATCCCTAGGTATCACTCGC+CGG + chr7_4:60218454-60218473 None:intergenic 55.0%
CAGACCCTATCGTCATCCCT+AGG + chr7_4:60218467-60218486 None:intergenic 55.0%
ACCGCCGGAAAACTAGTCGC+CGG - chr7_4:60212056-60212075 Msa1167730:three_prime_UTR 60.0%
!!! ACCGGCGACTAGTTTTCCGG+CGG + chr7_4:60212060-60212079 None:intergenic 60.0%
ACGTGCTCGAGCTGAGTTCC+AGG - chr7_4:60215111-60215130 Msa1167730:CDS 60.0%
CTCGAGCTGAGTTCCAGGAC+TGG - chr7_4:60215116-60215135 Msa1167730:CDS 60.0%
CAGGGCAACACCAACCCATG+TGG - chr7_4:60215565-60215584 Msa1167730:intron 60.0%
! ACGCGGGAGCTTTAGTGCAC+CGG + chr7_4:60215688-60215707 None:intergenic 60.0%
ACTAAAGCTCCCGCGTACGC+AGG - chr7_4:60215692-60215711 Msa1167730:intron 60.0%
CTAAAGCTCCCGCGTACGCA+GGG - chr7_4:60215693-60215712 Msa1167730:intron 60.0%
! AAATGGTGGGACCCCTTCCC+CGG + chr7_4:60215720-60215739 None:intergenic 60.0%
TCAGCAAGCAGCTCAGCAGG+AGG + chr7_4:60216367-60216386 None:intergenic 60.0%
GCTATGGGAGCCATGGAGGA+TGG - chr7_4:60217248-60217267 Msa1167730:intron 60.0%
CACTGCGTCTCCATCCTCCA+TGG + chr7_4:60217261-60217280 None:intergenic 60.0%
CTCTCCGGCGAGTGATACCT+AGG - chr7_4:60218447-60218466 Msa1167730:CDS 60.0%
ATTCCGACTCCGACCACCGC+CGG - chr7_4:60212041-60212060 Msa1167730:three_prime_UTR 65.0%
TTTCCGGCGGTGGTCGGAGT+CGG + chr7_4:60212047-60212066 None:intergenic 65.0%
!!! GGCGACTAGTTTTCCGGCGG+TGG + chr7_4:60212057-60212076 None:intergenic 65.0%
! GATTGCGTGAAGGGCGTGCC+AGG - chr7_4:60215277-60215296 Msa1167730:intron 65.0%
! CGCGGGAGCTTTAGTGCACC+GGG + chr7_4:60215687-60215706 None:intergenic 65.0%
GGGGAAGGGGTCCCACCATT+TGG - chr7_4:60215719-60215738 Msa1167730:intron 65.0%
TTCCCCGGACCCTGCGTACG+CGG + chr7_4:60215705-60215724 None:intergenic 70.0%
CGTACGCAGGGTCCGGGGAA+GGG - chr7_4:60215705-60215724 Msa1167730:intron 70.0%
GTACGCAGGGTCCGGGGAAG+GGG - chr7_4:60215706-60215725 Msa1167730:intron 70.0%
GCTCCCGCGTACGCAGGGTC+CGG - chr7_4:60215698-60215717 Msa1167730:intron 75.0%
CTCCCGCGTACGCAGGGTCC+GGG - chr7_4:60215699-60215718 Msa1167730:intron 75.0%
TCCCGCGTACGCAGGGTCCG+GGG - chr7_4:60215700-60215719 Msa1167730:intron 75.0%
TCCCCGGACCCTGCGTACGC+GGG + chr7_4:60215704-60215723 None:intergenic 75.0%
GCGTACGCAGGGTCCGGGGA+AGG - chr7_4:60215704-60215723 Msa1167730:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60211892 60218589 60211892 ID=Msa1167730;Name=Msa1167730
chr7_4 mRNA 60211892 60218589 60211892 ID=Msa1167730-mRNA-1;Parent=Msa1167730;Name=Msa1167730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=85|1|1|1|1|1|13|448|647
chr7_4 exon 60211892 60212459 60211892 ID=Msa1167730-mRNA-1:exon:18800;Parent=Msa1167730-mRNA-1
chr7_4 exon 60212561 60212827 60212561 ID=Msa1167730-mRNA-1:exon:18799;Parent=Msa1167730-mRNA-1
chr7_4 exon 60213165 60213341 60213165 ID=Msa1167730-mRNA-1:exon:18798;Parent=Msa1167730-mRNA-1
chr7_4 exon 60213428 60213576 60213428 ID=Msa1167730-mRNA-1:exon:18797;Parent=Msa1167730-mRNA-1
chr7_4 exon 60213678 60213828 60213678 ID=Msa1167730-mRNA-1:exon:18796;Parent=Msa1167730-mRNA-1
chr7_4 exon 60213917 60214201 60213917 ID=Msa1167730-mRNA-1:exon:18795;Parent=Msa1167730-mRNA-1
chr7_4 exon 60214883 60214978 60214883 ID=Msa1167730-mRNA-1:exon:18794;Parent=Msa1167730-mRNA-1
chr7_4 exon 60215101 60215241 60215101 ID=Msa1167730-mRNA-1:exon:18793;Parent=Msa1167730-mRNA-1
chr7_4 exon 60215325 60215387 60215325 ID=Msa1167730-mRNA-1:exon:18792;Parent=Msa1167730-mRNA-1
chr7_4 exon 60216114 60216185 60216114 ID=Msa1167730-mRNA-1:exon:18791;Parent=Msa1167730-mRNA-1
chr7_4 exon 60217829 60217928 60217829 ID=Msa1167730-mRNA-1:exon:18790;Parent=Msa1167730-mRNA-1
chr7_4 exon 60218095 60218186 60218095 ID=Msa1167730-mRNA-1:exon:18789;Parent=Msa1167730-mRNA-1
chr7_4 exon 60218274 60218589 60218274 ID=Msa1167730-mRNA-1:exon:18788;Parent=Msa1167730-mRNA-1
chr7_4 five_prime_UTR 60218505 60218589 60218505 ID=Msa1167730-mRNA-1:five_prime_utr;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60218274 60218504 60218274 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60218095 60218186 60218095 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60217829 60217928 60217829 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60216114 60216185 60216114 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60215325 60215387 60215325 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60215101 60215241 60215101 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60214883 60214978 60214883 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60213917 60214201 60213917 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60213678 60213828 60213678 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60213428 60213576 60213428 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60213165 60213341 60213165 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60212561 60212827 60212561 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 CDS 60212340 60212459 60212340 ID=Msa1167730-mRNA-1:cds;Parent=Msa1167730-mRNA-1
chr7_4 three_prime_UTR 60211892 60212339 60211892 ID=Msa1167730-mRNA-1:three_prime_utr;Parent=Msa1167730-mRNA-1
Gene Sequence

>Msa1167730

ATGGCGAGCGGTAGTAGTAGAAAATCTCGAAGACGAAGAAGATCCGATGATGACTCTGCATCTGATTCCGACTCCGACCACCGCCGGAAAACTAGTCGCCGGTCACGCCGAGATTCAGATGATGATTCAAGTGACGACAACGATAATAGAACTGGAAGAAAGAAGAAATCTTCCAGAACAATCACAGAAGAGGAAATTTCACAGTACATGGCTAAAAAAGCTCAGAGAAAGGCTACGAAAGTTGCTAAGAAATTGAAGACGAATACAGTATCGGGTTATTCCAATGATTCTAATCCATTTGGTGATACTAATCTCAATGAAAAGTTTGTTTGGCGTAAGAAGATTGAGCGCGATGTTACTCAAGGTGTATCAATTGATTCCTTTTCTGTTAAAGCTGAGAAGAAAAGACAAGTAGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCACTTGAGAAAGCACAACATGAAGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTTGATCAAAGCAAAGTCAGGTCAGAGATTAGATTGCGTGAAGGGCGTGCCAGGCCAATTGATGTCCTAACCAAGCATCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACGGTTAAAGAAATGAGTGAACTTCGTGACGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGTGATTGGGAGCTAGCTGAATCTCGAAAAAAGGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCTGAACAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGGACCTTTTACATGGAAAGACACGTACAGAGTTGGAAGCCTTACAGGCTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAGATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAGCAACCATTAGAGGATGAAGATAAACCGGAGCGTGCTCTTGACATGATACCTGAGGAGGCATATACTGAGGAGGATGAGGAGGAGGATGCTAAAGTAGTCCGTTCTGCTGATGAATCATTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGATGAGGCTGGATCATTTTCACCACAACTGTTGCATGATGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAAAGCTATACTGGAGCGGAAACGTATGGCTGTAATGGAAGAGCAGCAAAAACGAATTCAGGAAGCAATGGCATCAAAGCCAGCTCCATCTGAAGATAATTTAGAGTTGAAAGCCTTTAAAGCTATGGGAGCCATGGAGGATGGAGACGCAGTGTTTGGATCTGGAGCTGAAGTGAGCCTCGATTCACAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGTGTTCACACCGGATATGAGTGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGGTACAAATTTAACATTTTCTATCCTGATCTTGTAGACAAGATAAAAGCCCCGAACTACACTATAGAGAAAGACGGCGGCAATGGGGAGACATGCATTATTAGATTCCATGCAGGACCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATACTCTCACAAGAAAGGTTTTAAATGCACATTCGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGCCGATAA

Protein sequence

>Msa1167730

MASGSSRKSRRRRRSDDDSASDSDSDHRRKTSRRSRRDSDDDSSDDNDNRTGRKKKSSRTITEEEISQYMAKKAQRKATKVAKKLKTNTVSGYSNDSNPFGDTNLNEKFVWRKKIERDVTQGVSIDSFSVKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKDLLHGKTRTELEALQAHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDKPERALDMIPEEAYTEEDEEEDAKVVRSADESFSPEPIRENQEAEDEAGSFSPQLLHDDENEEAIDPEEDKAILERKRMAVMEEQQKRIQEAMASKPAPSEDNLELKAFKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIEKDGGNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR*