AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167680 MtrunA17_Chr7g0265361 98.765 648 7 1 1 647 1 648 0.0 1316
Msa1167680 MtrunA17_Chr1g0179691 78.884 663 113 4 6 647 2 658 0.0 1025
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167680 AT1G03910.1 76.740 589 132 2 62 647 86 672 0.0 931
Msa1167680 AT1G03910.2 71.406 633 132 3 62 647 86 716 0.0 910
Msa1167680 AT2G36815.2 51.546 97 33 2 269 364 17 100 5.60e-21 88.6
Msa1167680 AT2G36815.1 52.128 94 31 2 272 364 26 106 3.24e-20 86.7

Find 191 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGGCTCCCATAGCTTTAA+AGG 0.146220 7_4:+60176416 None:intergenic
TGACTTTGCTTTGATCAAAA+TGG 0.168302 7_4:+60178414 None:intergenic
AGCTTCTTGATTCTCTCTAA+TGG 0.217152 7_4:+60176715 None:intergenic
CACCAACCCATGTGGAATAT+TGG 0.248519 7_4:-60178083 Msa1167680:CDS
TCGTATGGATAATAACAAAA+AGG 0.249074 7_4:-60175113 Msa1167680:three_prime_UTR
TCAAATATAGGCTTGTTTAA+AGG 0.267285 7_4:-60177013 Msa1167680:intron
ATTCTTATCGAGTATATTCT+AGG 0.269159 7_4:+60175244 None:intergenic
TTGTACCCTTGCACAATCTT+TGG 0.280919 7_4:+60175885 None:intergenic
TTTACCTTGAAGACCATATA+TGG 0.284103 7_4:+60178293 None:intergenic
CTCTCCTTGTGGTGTGTGAT+TGG 0.286802 7_4:-60177375 Msa1167680:CDS
GCTTCTTGATTCTCTCTAAT+GGG 0.293100 7_4:+60176716 None:intergenic
TACAGAGTTGGAAGCCTTAC+AGG 0.297377 7_4:-60177206 Msa1167680:CDS
AAATATTGGAGCAGGTTTAT+TGG 0.299548 7_4:-60176016 Msa1167680:intron
TTCCTCTTCTGTGATTGTTC+TGG 0.304361 7_4:+60181511 None:intergenic
CTTTCTCTATAGTGTAGTTC+GGG 0.307351 7_4:+60175820 None:intergenic
TCTCAATGGCTCTGATGATT+TGG 0.310949 7_4:-60178333 Msa1167680:CDS
GGTTTATCTTCATCCTCTAA+TGG 0.311251 7_4:+60176943 None:intergenic
TAACAACATCGCCAAGGGTT+AGG 0.311822 7_4:-60181714 Msa1167680:five_prime_UTR
AGAAATAAATGAACCATATA+TGG 0.332368 7_4:-60178306 Msa1167680:CDS
ACGTGCTCGAGCTGAGTTCC+AGG 0.339829 7_4:-60178545 Msa1167680:CDS
TCCAATGATTCTAATCCATT+TGG 0.349636 7_4:-60181316 Msa1167680:CDS
TTGAAATACTTTGGCTTCCT+TGG 0.351127 7_4:+60175975 None:intergenic
TGCACTAATTAACTAGTATA+TGG 0.353671 7_4:+60175285 None:intergenic
ACCGCCGATAATTTCATATC+AGG 0.373562 7_4:-60175525 Msa1167680:exon
GAGGATGGAGACGCAGTGTT+TGG 0.374545 7_4:-60176393 Msa1167680:CDS
CTTCTCAGCTTTAACAGAAA+AGG 0.376850 7_4:+60181050 None:intergenic
ACCAAATGGATTAGAATCAT+TGG 0.377470 7_4:+60181315 None:intergenic
TGAAGAGGACAAAGCTATAC+TGG 0.377597 7_4:-60176624 Msa1167680:intron
TTTATCTTGTCTACAAGATC+AGG 0.386955 7_4:+60175846 None:intergenic
ACCAACCCATGTGGAATATT+GGG 0.388380 7_4:-60178082 Msa1167680:CDS
TCTTTCTCTATAGTGTAGTT+CGG 0.388508 7_4:+60175819 None:intergenic
TGCTCCTTTAGAATTTATCT+TGG 0.394381 7_4:+60175375 None:intergenic
AGTATAGCTTTGTCCTCTTC+AGG 0.395081 7_4:+60176626 None:intergenic
ACGTCTTGAGCAACCATTAG+AGG 0.398700 7_4:-60176956 Msa1167680:CDS
TGTTCAGCAAGCAGCTCAGC+AGG 0.403673 7_4:+60177289 None:intergenic
TCCGCATTGTAAACAAAGAA+TGG 0.405433 7_4:-60175630 Msa1167680:CDS
CAGCAAAGGTGGTTGAGTAC+TGG 0.408832 7_4:-60177153 Msa1167680:CDS
TGACTCAATGTGAGCCTGTA+AGG 0.412240 7_4:+60177192 None:intergenic
ATTGCCTGATATGAAATTAT+CGG 0.423857 7_4:+60175521 None:intergenic
TACGTGTCTTTCCATGTAAA+AGG 0.424095 7_4:+60177227 None:intergenic
TCTCCTTGTGGTGTGTGATT+GGG 0.426562 7_4:-60177374 Msa1167680:CDS
CCTTGCACAATCTTTGGAGG+TGG 0.426781 7_4:+60175891 None:intergenic
TTTAGATCAAATCACAATCA+TGG 0.427509 7_4:+60175330 None:intergenic
GTTGAAAGCCTTTAAAGCTA+TGG 0.428454 7_4:-60176424 Msa1167680:CDS
AGCACAACATGAAGAAGAAA+TGG 0.434364 7_4:-60179312 Msa1167680:intron
TACCCTTGCACAATCTTTGG+AGG 0.435278 7_4:+60175888 None:intergenic
TGTCATGATCATAGTGAGTC+TGG 0.437642 7_4:+60175916 None:intergenic
TGATTCTCTCTAATGGGCTC+TGG 0.438807 7_4:+60176722 None:intergenic
AGCAAAGGTGGTTGAGTACT+GGG 0.442488 7_4:-60177152 Msa1167680:CDS
GAAAAGACAAGTAGAAAGGA+TGG 0.442901 7_4:-60181028 Msa1167680:intron
AACAACATCGCCAAGGGTTA+GGG 0.445137 7_4:-60181713 Msa1167680:five_prime_UTR
TAGAGAAAGACGGCGGCAAT+GGG 0.445619 7_4:-60175806 Msa1167680:CDS
GATTGCGTGAAGGGCGTGCC+AGG 0.446615 7_4:-60178379 Msa1167680:CDS
GACGACAACGATAATAGAAC+TGG 0.446928 7_4:-60181551 Msa1167680:CDS
TGAACCATATATGGTCTTCA+AGG 0.450157 7_4:-60178297 Msa1167680:intron
TGACGACATCAAAATGCATC+TGG 0.451814 7_4:-60178121 Msa1167680:CDS
TGAACACGGTTGAAATACTT+TGG 0.452374 7_4:+60175966 None:intergenic
AGACTTACTATATCTTCATA+TGG 0.456635 7_4:+60175750 None:intergenic
TGCTTGGTTAGGACATCAAT+TGG 0.460472 7_4:+60178356 None:intergenic
AAATGCATCTGGATCTTGAC+AGG 0.460556 7_4:-60178110 Msa1167680:CDS
ATATTTGTTCCACTCATATC+CGG 0.462283 7_4:+60175941 None:intergenic
GGAGACGCAGTGTTTGGATC+TGG 0.464689 7_4:-60176387 Msa1167680:CDS
CCGCATTGTAAACAAAGAAT+GGG 0.467266 7_4:-60175629 Msa1167680:CDS
AGAATTATTGCATATTCGTA+TGG 0.468144 7_4:-60175128 Msa1167680:three_prime_UTR
TGTAAAAGGTCCTTCACATC+TGG 0.469963 7_4:+60177241 None:intergenic
ATTAGAGGATGAAGATAAAC+CGG 0.473687 7_4:-60176941 Msa1167680:CDS
ATCAGAGCCATTGAGATGCT+TGG 0.474442 7_4:+60178340 None:intergenic
GGCATATACTGAGGAGGATG+AGG 0.476259 7_4:-60176890 Msa1167680:CDS
TACTGAGGAGGATGAGGAGG+AGG 0.476354 7_4:-60176884 Msa1167680:CDS
CATCTGAATCTCGGCGTGAC+CGG 0.477601 7_4:+60181585 None:intergenic
AATCTCGAGATGGGTCTCTC+CGG 0.478512 7_4:-60175224 Msa1167680:three_prime_UTR
AACTCTAAATTATCTTCAGA+TGG 0.479290 7_4:+60176444 None:intergenic
TGAGCTGCTTGCTGAACAAA+GGG 0.483674 7_4:-60177284 Msa1167680:CDS
GCGGAAACGTATGGCTGTAA+TGG 0.488174 7_4:-60176514 Msa1167680:CDS
TTGAGATTAGTATCACCAAA+TGG 0.494079 7_4:+60181301 None:intergenic
ACTTATAATAAAACCTGTGT+GGG 0.494617 7_4:-60181758 Msa1167680:five_prime_UTR
ATACCTTGGCCTTGTATATG+TGG 0.497718 7_4:+60177110 None:intergenic
ACAGCTTCCCTCAAATCAAA+AGG 0.499844 7_4:+60175475 None:intergenic
TTGAAGACGAATACAGTATC+GGG 0.502893 7_4:-60181343 Msa1167680:CDS
CTTGCACAATCTTTGGAGGT+GGG 0.503952 7_4:+60175892 None:intergenic
TTTCCGGCGGTGGTCGGAGT+CGG 0.504138 7_4:+60181616 None:intergenic
AAATTATCTTCAGATGGAGC+TGG 0.504991 7_4:+60176450 None:intergenic
AGAAGAAAAGACAAGTAGAA+AGG 0.506412 7_4:-60181032 Msa1167680:CDS
ATATATGGTACAGGGTTTGA+CGG 0.508336 7_4:-60178166 Msa1167680:intron
GATGAGGAGGAGGATGCTAA+AGG 0.508964 7_4:-60176874 Msa1167680:intron
TTGAAAGCCTTTAAAGCTAT+GGG 0.509092 7_4:-60176423 Msa1167680:CDS
TATGAAATTATCGGCGGTAG+CGG 0.509701 7_4:+60175530 None:intergenic
GGTTAGGACATCAATTGGCC+TGG 0.512323 7_4:+60178361 None:intergenic
AGCCATTGAGATGCTTGGTT+AGG 0.515511 7_4:+60178345 None:intergenic
CTCTCCGGCGAGTGATACCT+AGG 0.516411 7_4:-60175209 Msa1167680:three_prime_UTR
TGAAGTGAGCCTCGATTCAC+AGG 0.516699 7_4:-60176361 Msa1167680:intron
TCCTCAGTATATGCCTCCTC+AGG 0.516934 7_4:+60176898 None:intergenic
CAGAGATTAGATTGCGTGAA+GGG 0.520377 7_4:-60178388 Msa1167680:CDS
TCGAGCTGAGTTCCAGGACT+GGG 0.522136 7_4:-60178539 Msa1167680:CDS
CATTGTTTAACCCTAACCCT+TGG 0.524297 7_4:+60181703 None:intergenic
CTCGAGCTGAGTTCCAGGAC+TGG 0.526610 7_4:-60178540 Msa1167680:CDS
CTGAGCTGCTTGCTGAACAA+AGG 0.528929 7_4:-60177285 Msa1167680:CDS
GCTATGGGAGCCATGGAGGA+TGG 0.529591 7_4:-60176408 Msa1167680:CDS
GTCCTAACCAAGCATCTCAA+TGG 0.529933 7_4:-60178347 Msa1167680:CDS
CTTCATATGGTGGTCCTGCA+TGG 0.530669 7_4:+60175763 None:intergenic
GTTAATTAGTGCATTCCGTA+TGG 0.531288 7_4:-60175275 Msa1167680:three_prime_UTR
TGGGAATACTCTCACAAGAA+AGG 0.534055 7_4:-60175610 Msa1167680:CDS
AGGATGCAATTGATCGAGCT+AGG 0.538391 7_4:-60177330 Msa1167680:CDS
GAAATTATCGGCGGTAGCGG+TGG 0.538663 7_4:+60175533 None:intergenic
ATAGAGAAAGACGGCGGCAA+TGG 0.539441 7_4:-60175807 Msa1167680:CDS
TTGAATCATCATCTGAATCT+CGG 0.539509 7_4:+60181576 None:intergenic
CGTATAGGAGCGGAAACGTA+TGG 0.539851 7_4:-60176523 Msa1167680:intron
CTTCACATCTGGCTCAACAC+TGG 0.541181 7_4:+60177252 None:intergenic
AGAGGAAATTTCACAGTACA+TGG 0.541595 7_4:-60181495 Msa1167680:CDS
GTGGCCAAGATAAATTCTAA+AGG 0.547320 7_4:-60175379 Msa1167680:three_prime_UTR
ATTCCGACTCCGACCACCGC+CGG 0.548012 7_4:-60181619 Msa1167680:CDS
ATTGAAGACGAATACAGTAT+CGG 0.548388 7_4:-60181344 Msa1167680:CDS
TATTGGAGCAGGTTTATTGG+TGG 0.548422 7_4:-60176013 Msa1167680:intron
CAAGAAGCTGAAGATGAGGC+TGG 0.549453 7_4:-60176701 Msa1167680:CDS
AATACAGGCAGAAATTGAAA+AGG 0.549731 7_4:-60179369 Msa1167680:intron
TTAGATCAAATCACAATCAT+GGG 0.551398 7_4:+60175331 None:intergenic
TCATCATCATGCAACAGTTG+TGG 0.553991 7_4:+60176668 None:intergenic
AAAACACCTCCACATATACA+AGG 0.555906 7_4:-60177119 Msa1167680:CDS
TGGAAAGACACGTACAGAGT+TGG 0.555932 7_4:-60177218 Msa1167680:CDS
TGATACCTAGGGATGACGAT+AGG 0.558897 7_4:-60175197 Msa1167680:three_prime_UTR
TTCTAGGAAGGAACACCATA+CGG 0.559392 7_4:+60175260 None:intergenic
TGCATTATTAGATTCCATGC+AGG 0.559588 7_4:-60175777 Msa1167680:CDS
GAATCAAGAAGCTGAAGATG+AGG 0.559806 7_4:-60176705 Msa1167680:CDS
CAGTGTTGAGCCAGATGTGA+AGG 0.561664 7_4:-60177251 Msa1167680:CDS
GATAATTTCATATCAGGCAA+TGG 0.562061 7_4:-60175519 Msa1167680:exon
TTCCAGAACAATCACAGAAG+AGG 0.563012 7_4:-60181513 Msa1167680:CDS
ATTGAGTCAGAGATGCGTAC+TGG 0.566781 7_4:-60177178 Msa1167680:CDS
CACTGCGTCTCCATCCTCCA+TGG 0.573173 7_4:+60176398 None:intergenic
CAGATTAACAACATCGCCAA+GGG 0.573344 7_4:-60181719 Msa1167680:five_prime_UTR
GATACCTAGGGATGACGATA+GGG 0.575644 7_4:-60175196 Msa1167680:three_prime_UTR
AGATAAATTCTAAAGGAGCA+TGG 0.580247 7_4:-60175372 Msa1167680:three_prime_UTR
TTATCGAGTATATTCTAGGA+AGG 0.580417 7_4:+60175248 None:intergenic
ATCATGTCAAGAGCACGCTC+CGG 0.581483 7_4:+60176922 None:intergenic
ACTCGATAAGAATCTCGAGA+TGG 0.584204 7_4:-60175234 Msa1167680:three_prime_UTR
CTCGATAAGAATCTCGAGAT+GGG 0.584469 7_4:-60175233 Msa1167680:three_prime_UTR
CCACCTCCAAAGATTGTGCA+AGG 0.584490 7_4:-60175891 Msa1167680:CDS
GTTGCATGATGATGAAAATG+AGG 0.585801 7_4:-60176660 Msa1167680:CDS
CATCCCTAGGTATCACTCGC+CGG 0.586976 7_4:+60175205 None:intergenic
TCAGATTAACAACATCGCCA+AGG 0.587348 7_4:-60181720 Msa1167680:five_prime_UTR
TCCCAATATTCCACATGGGT+TGG 0.589582 7_4:+60178081 None:intergenic
CCCATTCTTTGTTTACAATG+CGG 0.589870 7_4:+60175629 None:intergenic
CTTTAAAGCTATGGGAGCCA+TGG 0.593812 7_4:-60176415 Msa1167680:CDS
ACTCATATCCGGTGTGAACA+CGG 0.594826 7_4:+60175952 None:intergenic
ATTGATCGAGCTAGGGTGCG+TGG 0.595446 7_4:-60177322 Msa1167680:CDS
AAAATCTACTGTTTGAAATG+TGG 0.597918 7_4:-60175398 Msa1167680:three_prime_UTR
ATCAGATGCAGAGTCATCAT+CGG 0.601881 7_4:+60181640 None:intergenic
AAAACGAATTCAGGAAGCAA+TGG 0.607367 7_4:-60176481 Msa1167680:CDS
GGATGCAATTGATCGAGCTA+GGG 0.616184 7_4:-60177329 Msa1167680:CDS
ATATACTGAGGAGGATGAGG+AGG 0.617133 7_4:-60176887 Msa1167680:CDS
CACTTATAATAAAACCTGTG+TGG 0.619395 7_4:-60181759 Msa1167680:five_prime_UTR
CTTCATGTAGGCTCTCCTTG+TGG 0.620002 7_4:-60177386 Msa1167680:intron
TCAATCGAATTTCCCCACAC+AGG 0.620333 7_4:+60181745 None:intergenic
GCTCCCAATCACACACCACA+AGG 0.625505 7_4:+60177371 None:intergenic
TTTAAATGCACATTCGAACG+TGG 0.625849 7_4:-60175586 Msa1167680:CDS
TAAAGCTATGGGAGCCATGG+AGG 0.627137 7_4:-60176412 Msa1167680:CDS
GCGTACTGGTACAGCAAAGG+TGG 0.627923 7_4:-60177164 Msa1167680:CDS
CTTACTATATCTTCATATGG+TGG 0.634403 7_4:+60175753 None:intergenic
ACCGCCGGAAAACTAGTCGC+CGG 0.636310 7_4:-60181604 Msa1167680:CDS
TCAGCAAGCAGCTCAGCAGG+AGG 0.636929 7_4:+60177292 None:intergenic
GTGTTCACACCGGATATGAG+TGG 0.640725 7_4:-60175950 Msa1167680:CDS
TCTCCGGCGAGTGATACCTA+GGG 0.641290 7_4:-60175208 Msa1167680:three_prime_UTR
ATTGAGCGCGATGTTACTCA+AGG 0.644189 7_4:-60181087 Msa1167680:CDS
GATGCGTACTGGTACAGCAA+AGG 0.649100 7_4:-60177167 Msa1167680:CDS
TCAGAGATTAGATTGCGTGA+AGG 0.649679 7_4:-60178389 Msa1167680:CDS
AAAATGATTCATCAGCAGAA+CGG 0.650693 7_4:+60176747 None:intergenic
TATTTCAACCGTGTTCACAC+CGG 0.650995 7_4:-60175960 Msa1167680:CDS
CCTCCACATATACAAGGCCA+AGG 0.652292 7_4:-60177113 Msa1167680:intron
GGAAGCTATTGATCCTGAAG+AGG 0.658125 7_4:-60176639 Msa1167680:CDS
AACCCATGTGGAATATTGGG+AGG 0.659144 7_4:-60178079 Msa1167680:intron
TGCTCTTGACATGATACCTG+AGG 0.662422 7_4:-60176914 Msa1167680:CDS
GCCTGATATGAAATTATCGG+CGG 0.663501 7_4:+60175524 None:intergenic
ATACCTCCCAATATTCCACA+TGG 0.666278 7_4:+60178076 None:intergenic
GAAACAATACCTGTGAATCG+AGG 0.669091 7_4:+60176352 None:intergenic
AACTACACTATAGAGAAAGA+CGG 0.678317 7_4:-60175816 Msa1167680:CDS
TGAGGAGGCATATACTGAGG+AGG 0.678998 7_4:-60176896 Msa1167680:CDS
CAGGGCAACACCAACCCATG+TGG 0.679640 7_4:-60178091 Msa1167680:CDS
CACCTCCAAAGATTGTGCAA+GGG 0.681508 7_4:-60175890 Msa1167680:CDS
TCTTGACATGATACCTGAGG+AGG 0.683745 7_4:-60176911 Msa1167680:CDS
TTTCTCTATAGTGTAGTTCG+GGG 0.684958 7_4:+60175821 None:intergenic
GGCATGACAAGTACAGACCA+AGG 0.685007 7_4:-60175992 Msa1167680:CDS
CTTATAATAAAACCTGTGTG+GGG 0.685393 7_4:-60181757 Msa1167680:five_prime_UTR
AGAGAAAGACGGCGGCAATG+GGG 0.685515 7_4:-60175805 Msa1167680:CDS
ACCTGAGGAGGCATATACTG+AGG 0.687934 7_4:-60176899 Msa1167680:CDS
AATGCATCTGGATCTTGACA+GGG 0.688800 7_4:-60178109 Msa1167680:CDS
CAAGGGTTAGGGTTAAACAA+TGG 0.699057 7_4:-60181702 Msa1167680:exon
TAGGGTTAAACAATGGCGAG+CGG 0.710396 7_4:-60181695 Msa1167680:exon
TACCTCCCAATATTCCACAT+GGG 0.710728 7_4:+60178077 None:intergenic
CCTTGGCCTTGTATATGTGG+AGG 0.714941 7_4:+60177113 None:intergenic
AAAGGTGGTTGAGTACTGGG+AGG 0.739956 7_4:-60177149 Msa1167680:CDS
TACACTATAGAGAAAGACGG+CGG 0.747701 7_4:-60175813 Msa1167680:CDS
GAGCTGCTTGCTGAACAAAG+GGG 0.752410 7_4:-60177283 Msa1167680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAATACAAATAATTAATT+CGG + chr7_4:60177269-60177288 None:intergenic 10.0%
!! AATTAATTATTTGTATTCAT+TGG - chr7_4:60177269-60177288 Msa1167680:CDS 10.0%
!! TTAATTAATGATTTGATATA+TGG - chr7_4:60178677-60178696 Msa1167680:intron 10.0%
!!! TGAGTATATAAATTATATTT+TGG - chr7_4:60180310-60180329 Msa1167680:intron 10.0%
!!! ATATATAATTTGAATTTTTC+TGG - chr7_4:60180537-60180556 Msa1167680:intron 10.0%
!!! GAAATAAGATTTTTTTTTAA+CGG + chr7_4:60181185-60181204 None:intergenic 10.0%
!!! TATGTTTTTTTTTTCTTCTA+TGG - chr7_4:60175587-60175606 Msa1167680:CDS 15.0%
!! TAAATATTTCAGATAAATAC+TGG - chr7_4:60175676-60175695 Msa1167680:intron 15.0%
!! AATCATATATATCTTCATAT+TGG + chr7_4:60175705-60175724 None:intergenic 15.0%
!!! ACCTAAAAAATGTTATTTTT+AGG - chr7_4:60175730-60175749 Msa1167680:intron 15.0%
!!! ACCTAAAAATAACATTTTTT+AGG + chr7_4:60175734-60175753 None:intergenic 15.0%
!! AAAAAAATAGAATTAACACT+AGG - chr7_4:60176269-60176288 Msa1167680:intron 15.0%
!!! AGTATTGAAATTTTTTCAAA+AGG + chr7_4:60176787-60176806 None:intergenic 15.0%
!!! AAAGAAAATAACTTTTTTGT+AGG + chr7_4:60178125-60178144 None:intergenic 15.0%
!!! TATTAATTTGCTTCAAATAT+AGG - chr7_4:60179833-60179852 Msa1167680:intron 15.0%
!!! TTCTGATTTTTTTTTTGTTC+AGG - chr7_4:60175472-60175491 Msa1167680:three_prime_UTR 20.0%
!!! ATGTTATTTTTAGGTTTGTT+TGG - chr7_4:60175739-60175758 Msa1167680:intron 20.0%
!! TCAATTGTTTGAATTTACAT+GGG + chr7_4:60176359-60176378 None:intergenic 20.0%
!! TAAAGTCAATCTCTTAAATT+TGG + chr7_4:60176542-60176561 None:intergenic 20.0%
!!! AAACAAGTTTTAAGAACAAT+CGG - chr7_4:60176894-60176913 Msa1167680:CDS 20.0%
!! TTGTTAGTTAATACGTATTA+TGG - chr7_4:60177590-60177609 Msa1167680:intron 20.0%
!! TGTTAGTTAATACGTATTAT+GGG - chr7_4:60177591-60177610 Msa1167680:intron 20.0%
!! TTAAACTAATATGTCAGATT+AGG + chr7_4:60177688-60177707 None:intergenic 20.0%
!! ATTATAACAGTTGAAACTTA+GGG + chr7_4:60177791-60177810 None:intergenic 20.0%
!! AATTATAACAGTTGAAACTT+AGG + chr7_4:60177792-60177811 None:intergenic 20.0%
!! ATTATAACAGTTGAAACTTA+GGG + chr7_4:60177791-60177810 None:intergenic 20.0%
!! AATTATAACAGTTGAAACTT+AGG + chr7_4:60177792-60177811 None:intergenic 20.0%
!!! AAGTTATTTTCTTTTAACCA+CGG - chr7_4:60178131-60178150 Msa1167680:CDS 20.0%
!!! CAAAAACTGTGTTATTTTAT+TGG - chr7_4:60178249-60178268 Msa1167680:intron 20.0%
!! AGAAATAAATGAACCATATA+TGG - chr7_4:60178552-60178571 Msa1167680:CDS 20.0%
!!! TCAAAAAGTGCTTATATTTA+GGG + chr7_4:60179022-60179041 None:intergenic 20.0%
!! TGTATAAGGGTTTATATTTA+TGG + chr7_4:60179058-60179077 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr7_4:60179120-60179139 None:intergenic 20.0%
!! GAAGTTAGTAGTATTAATTA+GGG + chr7_4:60179121-60179140 None:intergenic 20.0%
!! AGAAGTTAGTAGTATTAATT+AGG + chr7_4:60179122-60179141 None:intergenic 20.0%
!! AATTAATACTACTAACTTCT+TGG - chr7_4:60179122-60179141 Msa1167680:intron 20.0%
!! TTTCTTAAGAAATGTGAAAA+AGG - chr7_4:60179280-60179299 Msa1167680:intron 20.0%
!!! AGTAAATATTTTAGTTGGAT+TGG - chr7_4:60179333-60179352 Msa1167680:CDS 20.0%
!!! TGAAAGTCATTTAGTTTTTT+TGG + chr7_4:60179362-60179381 None:intergenic 20.0%
!! AAAGCTTAGTTAAGATTTAT+TGG - chr7_4:60179443-60179462 Msa1167680:intron 20.0%
!! GCATTAGAACAAATATTTAA+AGG + chr7_4:60179811-60179830 None:intergenic 20.0%
!!! AAGGTATATACATTTTGTTT+CGG - chr7_4:60180003-60180022 Msa1167680:intron 20.0%
!!! GTTGTTCATTACTTTTTTAT+TGG - chr7_4:60180030-60180049 Msa1167680:intron 20.0%
!! TATACTCATAATAAAAGTAG+AGG + chr7_4:60180298-60180317 None:intergenic 20.0%
!!! AATTATATTTTGGTACGTAT+AGG - chr7_4:60180320-60180339 Msa1167680:intron 20.0%
!! AAAAATAGGATAGAATGATT+CGG - chr7_4:60180595-60180614 Msa1167680:intron 20.0%
!! TCAAAAACTTAAAAGTTGAA+AGG + chr7_4:60180812-60180831 None:intergenic 20.0%
!!! TTTTAAGTTTTTGACAATTC+TGG - chr7_4:60180818-60180837 Msa1167680:intron 20.0%
!!! ACACAGGTTTTATTATAAGT+GGG + chr7_4:60175100-60175119 None:intergenic 25.0%
! ACTTATAATAAAACCTGTGT+GGG - chr7_4:60175100-60175119 Msa1167680:three_prime_UTR 25.0%
! TGTTTATGTTTCTCCATATA+TGG - chr7_4:60175890-60175909 Msa1167680:CDS 25.0%
! TTAAGAGTTTCAAATTGAAG+CGG - chr7_4:60175927-60175946 Msa1167680:CDS 25.0%
!! TCTTTAAGCTTTAGCTTAAT+AGG - chr7_4:60175977-60175996 Msa1167680:CDS 25.0%
! TAAGTTAATCCAAACATACT+CGG + chr7_4:60176054-60176073 None:intergenic 25.0%
!! AGTTTGACACTATTTTATCT+TGG - chr7_4:60176161-60176180 Msa1167680:intron 25.0%
!! GTTTGACACTATTTTATCTT+GGG - chr7_4:60176162-60176181 Msa1167680:intron 25.0%
! CTCAATTGTTTGAATTTACA+TGG + chr7_4:60176360-60176379 None:intergenic 25.0%
! TATTATTACCCAAATCTTGA+GGG + chr7_4:60176462-60176481 None:intergenic 25.0%
! TTATTATTACCCAAATCTTG+AGG + chr7_4:60176463-60176482 None:intergenic 25.0%
! AGATTTGGGTAATAATAAGA+CGG - chr7_4:60176465-60176484 Msa1167680:CDS 25.0%
! AAATGATAGGTTATATGACA+AGG + chr7_4:60176598-60176617 None:intergenic 25.0%
! TGAAGCATGTATTAAATGAT+AGG + chr7_4:60176611-60176630 None:intergenic 25.0%
! AACATTCCATGTATATTTCA+TGG - chr7_4:60176635-60176654 Msa1167680:CDS 25.0%
! ACATTCCATGTATATTTCAT+GGG - chr7_4:60176636-60176655 Msa1167680:CDS 25.0%
!! AAATAATTTGTATACGGACT+TGG - chr7_4:60176726-60176745 Msa1167680:CDS 25.0%
!!! ACATGAATCACTTTTGTTTT+AGG - chr7_4:60176928-60176947 Msa1167680:CDS 25.0%
!!! CATGAATCACTTTTGTTTTA+GGG - chr7_4:60176929-60176948 Msa1167680:CDS 25.0%
! AAGTTGGATATTGAAGAAAA+TGG + chr7_4:60177156-60177175 None:intergenic 25.0%
!! CCAGTTTAAAATGATAAAGT+TGG + chr7_4:60177172-60177191 None:intergenic 25.0%
!! CCAACTTTATCATTTTAAAC+TGG - chr7_4:60177169-60177188 Msa1167680:CDS 25.0%
! TTATTTGTATTCATTGGAGA+TGG - chr7_4:60177275-60177294 Msa1167680:CDS 25.0%
! TTATTACCTATTCCTAGTTA+TGG + chr7_4:60177338-60177357 None:intergenic 25.0%
! AAATTGAAAAGGTGAAAAAG+AGG - chr7_4:60177500-60177519 Msa1167680:intron 25.0%
!! TTTAAACATGAGTCTAAGAT+TGG - chr7_4:60177703-60177722 Msa1167680:intron 25.0%
!!! TTTGTTGTTCTTGTCTAATA+TGG - chr7_4:60177858-60177877 Msa1167680:intron 25.0%
! GAAACTTAGGGATTAAATAA+AGG + chr7_4:60178009-60178028 None:intergenic 25.0%
!!! TTTGTTGTTCTTGTCTAATA+TGG - chr7_4:60177858-60177877 Msa1167680:intron 25.0%
!!! AGTTATTTTCTTTTAACCAC+GGG - chr7_4:60178132-60178151 Msa1167680:CDS 25.0%
! TGACATAAGTGTTAGATTAA+TGG - chr7_4:60178223-60178242 Msa1167680:intron 25.0%
! TTGCATAATTAAACAGCTTT+AGG + chr7_4:60178630-60178649 None:intergenic 25.0%
! AATGATTTGATATATGGTAC+AGG - chr7_4:60178683-60178702 Msa1167680:intron 25.0%
! ATGATTTGATATATGGTACA+GGG - chr7_4:60178684-60178703 Msa1167680:intron 25.0%
!!! CATTTATGTTGTTTCAGATA+CGG + chr7_4:60178862-60178881 None:intergenic 25.0%
!!! CTCAAAAAGTGCTTATATTT+AGG + chr7_4:60179023-60179042 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr7_4:60179110-60179129 None:intergenic 25.0%
! ACACAAAATACTACAAACAA+AGG - chr7_4:60179206-60179225 Msa1167680:intron 25.0%
! GTGTTGCATAAAACAATAAA+CGG + chr7_4:60179394-60179413 None:intergenic 25.0%
!!! ATTGTTTTATGCAACACATT+TGG - chr7_4:60179397-60179416 Msa1167680:intron 25.0%
!! TCAAATATAGGCTTGTTTAA+AGG - chr7_4:60179845-60179864 Msa1167680:intron 25.0%
! CGCGTGATTATTAAATTTAA+TGG - chr7_4:60180268-60180287 Msa1167680:intron 25.0%
! AACTCTAAATTATCTTCAGA+TGG + chr7_4:60180417-60180436 None:intergenic 25.0%
! TAGAAAATATGCTGTTAGAT+AGG - chr7_4:60180561-60180580 Msa1167680:intron 25.0%
!! AGGTTAGCTCATAAAAAAAT+AGG - chr7_4:60180581-60180600 Msa1167680:intron 25.0%
! AAAGAGGTAATTGAAGAATA+TGG + chr7_4:60180691-60180710 None:intergenic 25.0%
! TTGACAATTCTGGTAAATAT+TGG - chr7_4:60180828-60180847 Msa1167680:intron 25.0%
! AGACTTACTATATCTTCATA+TGG + chr7_4:60181111-60181130 None:intergenic 25.0%
! TAATAGTTAGTGTGTTATGT+CGG + chr7_4:60181155-60181174 None:intergenic 25.0%
! ATTGCCTGATATGAAATTAT+CGG + chr7_4:60181340-60181359 None:intergenic 25.0%
!! CACGTATTTGCTAAAAAAAA+TGG + chr7_4:60181418-60181437 None:intergenic 25.0%
!! ATTTCAAACAGTAGATTTTG+TGG + chr7_4:60181459-60181478 None:intergenic 25.0%
!! AAAATCTACTGTTTGAAATG+TGG - chr7_4:60181460-60181479 Msa1167680:intron 25.0%
! TTAGATCAAATCACAATCAT+GGG + chr7_4:60181530-60181549 None:intergenic 25.0%
! TTTAGATCAAATCACAATCA+TGG + chr7_4:60181531-60181550 None:intergenic 25.0%
! TGCACTAATTAACTAGTATA+TGG + chr7_4:60181576-60181595 None:intergenic 25.0%
! ATTCTTATCGAGTATATTCT+AGG + chr7_4:60181617-60181636 None:intergenic 25.0%
! AGAATTATTGCATATTCGTA+TGG - chr7_4:60181730-60181749 Msa1167680:five_prime_UTR 25.0%
! TCGTATGGATAATAACAAAA+AGG - chr7_4:60181745-60181764 Msa1167680:five_prime_UTR 25.0%
! CGTATGGATAATAACAAAAA+GGG - chr7_4:60181746-60181765 Msa1167680:five_prime_UTR 25.0%
!!! CACACAGGTTTTATTATAAG+TGG + chr7_4:60175101-60175120 None:intergenic 30.0%
CACTTATAATAAAACCTGTG+TGG - chr7_4:60175099-60175118 Msa1167680:three_prime_UTR 30.0%
CTTATAATAAAACCTGTGTG+GGG - chr7_4:60175101-60175120 Msa1167680:three_prime_UTR 30.0%
TTGAATCATCATCTGAATCT+CGG + chr7_4:60175285-60175304 None:intergenic 30.0%
ATTGAAGACGAATACAGTAT+CGG - chr7_4:60175514-60175533 Msa1167680:three_prime_UTR 30.0%
TCCAATGATTCTAATCCATT+TGG - chr7_4:60175542-60175561 Msa1167680:CDS 30.0%
!! ACCAAATGGATTAGAATCAT+TGG + chr7_4:60175546-60175565 None:intergenic 30.0%
TTGAGATTAGTATCACCAAA+TGG + chr7_4:60175560-60175579 None:intergenic 30.0%
AGAAGAAAAGACAAGTAGAA+AGG - chr7_4:60175826-60175845 Msa1167680:CDS 30.0%
TTCAGAACACTAACCATATA+TGG + chr7_4:60175906-60175925 None:intergenic 30.0%
ATTTCATACAAGCATGACAT+AGG - chr7_4:60176011-60176030 Msa1167680:intron 30.0%
AAGTTAATCCAAACATACTC+GGG + chr7_4:60176053-60176072 None:intergenic 30.0%
ACTTATTTGAGCTTATCTAC+TGG - chr7_4:60176069-60176088 Msa1167680:intron 30.0%
CTTATTTGAGCTTATCTACT+GGG - chr7_4:60176070-60176089 Msa1167680:intron 30.0%
TATAAGCTGTTTATCCAAAC+AGG - chr7_4:60176230-60176249 Msa1167680:intron 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr7_4:60176231-60176250 Msa1167680:intron 30.0%
ATTATTACCCAAATCTTGAG+GGG + chr7_4:60176461-60176480 None:intergenic 30.0%
CATTCCATGTATATTTCATG+GGG - chr7_4:60176637-60176656 Msa1167680:CDS 30.0%
! GGTCGGAAATAATTTGTATA+CGG - chr7_4:60176720-60176739 Msa1167680:CDS 30.0%
!!! TTTGTTTTAGGGTTTGAAAG+TGG - chr7_4:60176940-60176959 Msa1167680:CDS 30.0%
AGTCTATTGAAACCATAACT+AGG - chr7_4:60177323-60177342 Msa1167680:CDS 30.0%
TTGAAACCATAACTAGGAAT+AGG - chr7_4:60177329-60177348 Msa1167680:CDS 30.0%
!! GCTATTCATTAGTCTTCTTT+AGG - chr7_4:60177365-60177384 Msa1167680:CDS 30.0%
!! TCATTAGTCTTCTTTAGGTA+AGG - chr7_4:60177370-60177389 Msa1167680:CDS 30.0%
TGTTCTCTCAATTACAATAC+AGG - chr7_4:60177474-60177493 Msa1167680:intron 30.0%
AATACAGGCAGAAATTGAAA+AGG - chr7_4:60177489-60177508 Msa1167680:intron 30.0%
CTAACAACAAATAATGAGAG+AGG + chr7_4:60177577-60177596 None:intergenic 30.0%
GAAACTTAGGGATTAGATAA+AGG + chr7_4:60177779-60177798 None:intergenic 30.0%
TACATAGCAGTTCTTGTATT+TGG - chr7_4:60177901-60177920 Msa1167680:intron 30.0%
ACATAGCAGTTCTTGTATTT+GGG - chr7_4:60177902-60177921 Msa1167680:intron 30.0%
!!! TAGACACCAATCTTTTTTGT+AGG + chr7_4:60177942-60177961 None:intergenic 30.0%
!!! TTTTTTGTAGGCGACATAAT+TGG + chr7_4:60178113-60178132 None:intergenic 30.0%
!!! ATTTTGAGGCCCAAATATAA+TGG - chr7_4:60178175-60178194 Msa1167680:intron 30.0%
TGCACATTGCCATTATATTT+GGG + chr7_4:60178187-60178206 None:intergenic 30.0%
TTGCACATTGCCATTATATT+TGG + chr7_4:60178188-60178207 None:intergenic 30.0%
AAATATAATGGCAATGTGCA+AGG - chr7_4:60178187-60178206 Msa1167680:intron 30.0%
AATATAATGGCAATGTGCAA+GGG - chr7_4:60178188-60178207 Msa1167680:intron 30.0%
TTTGACAAATTCTTTCTTCC+AGG - chr7_4:60178274-60178293 Msa1167680:intron 30.0%
AAATGGAACTGCAGATTAAT+CGG + chr7_4:60178430-60178449 None:intergenic 30.0%
TGACTTTGCTTTGATCAAAA+TGG + chr7_4:60178447-60178466 None:intergenic 30.0%
!! ATTTTGATCAAAGCAAAGTC+AGG - chr7_4:60178446-60178465 Msa1167680:intron 30.0%
TTTACCTTGAAGACCATATA+TGG + chr7_4:60178568-60178587 None:intergenic 30.0%
! CGTATCTGAAACAACATAAA+TGG - chr7_4:60178860-60178879 Msa1167680:intron 30.0%
! AAAGTGCTTATATTTAGGGA+CGG + chr7_4:60179018-60179037 None:intergenic 30.0%
! ATCCTTTGTTTGTAGTACTT+TGG + chr7_4:60179169-60179188 None:intergenic 30.0%
! TGTTTGTAGTATTTTGTGTG+TGG + chr7_4:60179205-60179224 None:intergenic 30.0%
!!! GAGGGAGTAAATATTTTAGT+TGG - chr7_4:60179328-60179347 Msa1167680:CDS 30.0%
!! TCTTAACTAAGCTTTGAAGA+AGG + chr7_4:60179438-60179457 None:intergenic 30.0%
!!! TATGTGGAGGTGTTTTAAAA+TGG + chr7_4:60179735-60179754 None:intergenic 30.0%
TAATGTGATGAAGAATACCT+TGG + chr7_4:60179765-60179784 None:intergenic 30.0%
! AAGGCATCTGAAAGAATAAA+AGG + chr7_4:60179792-60179811 None:intergenic 30.0%
ATTAGAGGATGAAGATAAAC+CGG - chr7_4:60179917-60179936 Msa1167680:intron 30.0%
AAAATGATTCATCAGCAGAA+CGG + chr7_4:60180114-60180133 None:intergenic 30.0%
!! TTGAAAGCCTTTAAAGCTAT+GGG - chr7_4:60180435-60180454 Msa1167680:intron 30.0%
AAATATTGGAGCAGGTTTAT+TGG - chr7_4:60180842-60180861 Msa1167680:intron 30.0%
ATATTTGTTCCACTCATATC+CGG + chr7_4:60180920-60180939 None:intergenic 30.0%
TTTATCTTGTCTACAAGATC+AGG + chr7_4:60181015-60181034 None:intergenic 30.0%
TCTTTCTCTATAGTGTAGTT+CGG + chr7_4:60181042-60181061 None:intergenic 30.0%
AACTACACTATAGAGAAAGA+CGG - chr7_4:60181042-60181061 Msa1167680:CDS 30.0%
CTTACTATATCTTCATATGG+TGG + chr7_4:60181108-60181127 None:intergenic 30.0%
GATAATTTCATATCAGGCAA+TGG - chr7_4:60181339-60181358 Msa1167680:CDS 30.0%
!! TGCTCCTTTAGAATTTATCT+TGG + chr7_4:60181486-60181505 None:intergenic 30.0%
! AGATAAATTCTAAAGGAGCA+TGG - chr7_4:60181486-60181505 Msa1167680:CDS 30.0%
! TTATCGAGTATATTCTAGGA+AGG + chr7_4:60181613-60181632 None:intergenic 30.0%
AGAGGAAATTTCACAGTACA+TGG - chr7_4:60175363-60175382 Msa1167680:three_prime_UTR 35.0%
TTGAAGACGAATACAGTATC+GGG - chr7_4:60175515-60175534 Msa1167680:three_prime_UTR 35.0%
! CTTCTCAGCTTTAACAGAAA+AGG + chr7_4:60175811-60175830 None:intergenic 35.0%
GAAAAGACAAGTAGAAAGGA+TGG - chr7_4:60175830-60175849 Msa1167680:CDS 35.0%
GTTTCAAATTGAAGCGGAAT+CGG - chr7_4:60175933-60175952 Msa1167680:CDS 35.0%
! GCTTTAGCTTAATAGGTGAT+AGG - chr7_4:60175984-60176003 Msa1167680:CDS 35.0%
AACAATAACCCGAGTATGTT+TGG - chr7_4:60176042-60176061 Msa1167680:intron 35.0%
TTGTGAGTTGTGACATTGTT+TGG - chr7_4:60176101-60176120 Msa1167680:intron 35.0%
TGTGAGTTGTGACATTGTTT+GGG - chr7_4:60176102-60176121 Msa1167680:intron 35.0%
TTCATAAGCGCTTATGCTAT+TGG - chr7_4:60176201-60176220 Msa1167680:intron 35.0%
TGTTTATCCAAACAGGGTTT+AGG - chr7_4:60176237-60176256 Msa1167680:intron 35.0%
AGCAGTATGATTAGTAGAGT+GGG + chr7_4:60176301-60176320 None:intergenic 35.0%
GATGGTCTAGGTATTTAAAG+TGG + chr7_4:60176410-60176429 None:intergenic 35.0%
AACATTTGCATAGATGGTCT+AGG + chr7_4:60176422-60176441 None:intergenic 35.0%
CGTCAAAACATTTGCATAGA+TGG + chr7_4:60176428-60176447 None:intergenic 35.0%
TTATTACCCAAATCTTGAGG+GGG + chr7_4:60176460-60176479 None:intergenic 35.0%
TCATCTTACTAACACTACTC+TGG - chr7_4:60176500-60176519 Msa1167680:CDS 35.0%
CCTACTGTTGGAAAATATGT+AGG + chr7_4:60176567-60176586 None:intergenic 35.0%
! CCTACATATTTTCCAACAGT+AGG - chr7_4:60176564-60176583 Msa1167680:intron 35.0%
AAGGTTAACATTCCTACTGT+TGG + chr7_4:60176579-60176598 None:intergenic 35.0%
CATGTATATTTCATGGGGAA+GGG - chr7_4:60176642-60176661 Msa1167680:CDS 35.0%
!! CTCTGCTTTGATTTTACGTT+AGG - chr7_4:60176679-60176698 Msa1167680:CDS 35.0%
TTTACGTTAGGACATGACAA+TGG - chr7_4:60176691-60176710 Msa1167680:CDS 35.0%
TTTGAAAGTGGTACACAAAC+AGG - chr7_4:60176952-60176971 Msa1167680:CDS 35.0%
TCATTTCTGTAGTACGTGTT+AGG - chr7_4:60176998-60177017 Msa1167680:CDS 35.0%
GGCAACATTAATAGGAACTT+GGG + chr7_4:60177040-60177059 None:intergenic 35.0%
AGGCAACATTAATAGGAACT+TGG + chr7_4:60177041-60177060 None:intergenic 35.0%
AAACCAGAGGCAACATTAAT+AGG + chr7_4:60177048-60177067 None:intergenic 35.0%
AAGTGCAGGGATTAAATGAA+TGG + chr7_4:60177100-60177119 None:intergenic 35.0%
!! AACAGTTTTCAGAAAGTGCA+GGG + chr7_4:60177113-60177132 None:intergenic 35.0%
!! AAACAGTTTTCAGAAAGTGC+AGG + chr7_4:60177114-60177133 None:intergenic 35.0%
TAATTCGGAATAAGTGCAGA+AGG + chr7_4:60177254-60177273 None:intergenic 35.0%
TTGTATTCATTGGAGATGGT+TGG - chr7_4:60177279-60177298 Msa1167680:CDS 35.0%
TGTATTCATTGGAGATGGTT+GGG - chr7_4:60177280-60177299 Msa1167680:CDS 35.0%
AGCACAACATGAAGAAGAAA+TGG - chr7_4:60177546-60177565 Msa1167680:intron 35.0%
ATGGCATACCAATTATGTCA+AGG - chr7_4:60177877-60177896 Msa1167680:intron 35.0%
! CTATGTAGCCTTGACATAAT+TGG + chr7_4:60177888-60177907 None:intergenic 35.0%
CATAGCAGTTCTTGTATTTG+GGG - chr7_4:60177903-60177922 Msa1167680:intron 35.0%
ATAGCAGTTCTTGTATTTGG+GGG - chr7_4:60177904-60177923 Msa1167680:intron 35.0%
TGCAAGCCTACAAAAAAGAT+TGG - chr7_4:60177933-60177952 Msa1167680:intron 35.0%
ATATTTGGGCCTCAAAATAC+CGG + chr7_4:60178173-60178192 None:intergenic 35.0%
TGAACCATATATGGTCTTCA+AGG - chr7_4:60178561-60178580 Msa1167680:CDS 35.0%
ATATATGGTACAGGGTTTGA+CGG - chr7_4:60178692-60178711 Msa1167680:intron 35.0%
AAACAACATAAATGGCAACC+CGG - chr7_4:60178868-60178887 Msa1167680:intron 35.0%
TTCAGATACACCAAATGGTA+AGG + chr7_4:60178961-60178980 None:intergenic 35.0%
! GTTGTTTCAGATACACCAAA+TGG + chr7_4:60178966-60178985 None:intergenic 35.0%
! CACCAAAGTACTACAAACAA+AGG - chr7_4:60179164-60179183 Msa1167680:intron 35.0%
GAAATGTGAAAAAGGCAAAG+CGG - chr7_4:60179288-60179307 Msa1167680:intron 35.0%
AAATGTGAAAAAGGCAAAGC+GGG - chr7_4:60179289-60179308 Msa1167680:intron 35.0%
TATTGGTCACAACTTCATGT+AGG - chr7_4:60179460-60179479 Msa1167680:intron 35.0%
TACGTGTCTTTCCATGTAAA+AGG + chr7_4:60179634-60179653 None:intergenic 35.0%
AAAACACCTCCACATATACA+AGG - chr7_4:60179739-60179758 Msa1167680:intron 35.0%
!! GCTTACGTAACATTTTAGCA+TGG + chr7_4:60179875-60179894 None:intergenic 35.0%
GGTTTATCTTCATCCTCTAA+TGG + chr7_4:60179918-60179937 None:intergenic 35.0%
AGTAAGGATGAAGACAAAGA+TGG + chr7_4:60180058-60180077 None:intergenic 35.0%
GCTTCTTGATTCTCTCTAAT+GGG + chr7_4:60180145-60180164 None:intergenic 35.0%
AGCTTCTTGATTCTCTCTAA+TGG + chr7_4:60180146-60180165 None:intergenic 35.0%
! GTTGCATGATGATGAAAATG+AGG - chr7_4:60180198-60180217 Msa1167680:intron 35.0%
!!! TATTTTGGTACGTATAGGAG+CGG - chr7_4:60180325-60180344 Msa1167680:intron 35.0%
AAAACGAATTCAGGAAGCAA+TGG - chr7_4:60180377-60180396 Msa1167680:intron 35.0%
AAATTATCTTCAGATGGAGC+TGG + chr7_4:60180411-60180430 None:intergenic 35.0%
!! GTTGAAAGCCTTTAAAGCTA+TGG - chr7_4:60180434-60180453 Msa1167680:intron 35.0%
TTCGGAGAAGTTATAAGTTG+TGG - chr7_4:60180613-60180632 Msa1167680:intron 35.0%
GTTGTGGATAAGTATCATAG+AGG - chr7_4:60180629-60180648 Msa1167680:intron 35.0%
ATTCTGGTAAATATTGGAGC+AGG - chr7_4:60180834-60180853 Msa1167680:intron 35.0%
! TTGAAATACTTTGGCTTCCT+TGG + chr7_4:60180886-60180905 None:intergenic 35.0%
TGAACACGGTTGAAATACTT+TGG + chr7_4:60180895-60180914 None:intergenic 35.0%
TTTCTCTATAGTGTAGTTCG+GGG + chr7_4:60181040-60181059 None:intergenic 35.0%
CTTTCTCTATAGTGTAGTTC+GGG + chr7_4:60181041-60181060 None:intergenic 35.0%
TGCATTATTAGATTCCATGC+AGG - chr7_4:60181081-60181100 Msa1167680:CDS 35.0%
TCCGCATTGTAAACAAAGAA+TGG - chr7_4:60181228-60181247 Msa1167680:intron 35.0%
! CCCATTCTTTGTTTACAATG+CGG + chr7_4:60181232-60181251 None:intergenic 35.0%
CCGCATTGTAAACAAAGAAT+GGG - chr7_4:60181229-60181248 Msa1167680:intron 35.0%
TTTAAATGCACATTCGAACG+TGG - chr7_4:60181272-60181291 Msa1167680:intron 35.0%
!!! TAGCTTCTCCTTTTGATTTG+AGG - chr7_4:60181375-60181394 Msa1167680:intron 35.0%
!!! AGCTTCTCCTTTTGATTTGA+GGG - chr7_4:60181376-60181395 Msa1167680:intron 35.0%
GTGGCCAAGATAAATTCTAA+AGG - chr7_4:60181479-60181498 Msa1167680:CDS 35.0%
GTTAATTAGTGCATTCCGTA+TGG - chr7_4:60181583-60181602 Msa1167680:CDS 35.0%
TCAGATTAACAACATCGCCA+AGG - chr7_4:60175138-60175157 Msa1167680:three_prime_UTR 40.0%
CAGATTAACAACATCGCCAA+GGG - chr7_4:60175139-60175158 Msa1167680:three_prime_UTR 40.0%
CATTGTTTAACCCTAACCCT+TGG + chr7_4:60175158-60175177 None:intergenic 40.0%
CAAGGGTTAGGGTTAAACAA+TGG - chr7_4:60175156-60175175 Msa1167680:three_prime_UTR 40.0%
ATCAGATGCAGAGTCATCAT+CGG + chr7_4:60175221-60175240 None:intergenic 40.0%
GACGACAACGATAATAGAAC+TGG - chr7_4:60175307-60175326 Msa1167680:three_prime_UTR 40.0%
TTCCAGAACAATCACAGAAG+AGG - chr7_4:60175345-60175364 Msa1167680:three_prime_UTR 40.0%
TTCCTCTTCTGTGATTGTTC+TGG + chr7_4:60175350-60175369 None:intergenic 40.0%
GGCTAAAAAAGCTCAGAGAA+AGG - chr7_4:60175384-60175403 Msa1167680:three_prime_UTR 40.0%
CAGCAGTATGATTAGTAGAG+TGG + chr7_4:60176302-60176321 None:intergenic 40.0%
CACTCTACTAATCATACTGC+TGG - chr7_4:60176300-60176319 Msa1167680:intron 40.0%
ACACTCGTTCTTTAAACCTC+AGG - chr7_4:60176326-60176345 Msa1167680:intron 40.0%
TTCTAACCCCCTCAAGATTT+GGG - chr7_4:60176451-60176470 Msa1167680:CDS 40.0%
CCTTCCCCATGAAATATACA+TGG + chr7_4:60176644-60176663 None:intergenic 40.0%
CCATGTATATTTCATGGGGA+AGG - chr7_4:60176641-60176660 Msa1167680:CDS 40.0%
TGTAGTACGTGTTAGGTACT+TGG - chr7_4:60177005-60177024 Msa1167680:CDS 40.0%
GTTCCTATTAATGTTGCCTC+TGG - chr7_4:60177042-60177061 Msa1167680:intron 40.0%
!! GTCCTGTGATTTGTTGCTAA+TGG - chr7_4:60177426-60177445 Msa1167680:intron 40.0%
GCAACGAACATTTAGTTGTC+AGG + chr7_4:60177452-60177471 None:intergenic 40.0%
AAAGGTGAAAAAGAGGAGAG+AGG - chr7_4:60177507-60177526 Msa1167680:intron 40.0%
TGAAAAAGAGGAGAGAGGAA+AGG - chr7_4:60177512-60177531 Msa1167680:intron 40.0%
GAAAAAGAGGAGAGAGGAAA+GGG - chr7_4:60177513-60177532 Msa1167680:intron 40.0%
!! ATTAGTCTTAGCTGTCCTAG+TGG - chr7_4:60177640-60177659 Msa1167680:intron 40.0%
GAAAGTCTTCTATCTAGCGA+AGG - chr7_4:60177829-60177848 Msa1167680:intron 40.0%
TAGCAGTTCTTGTATTTGGG+GGG - chr7_4:60177905-60177924 Msa1167680:intron 40.0%
GAAAGTCTTCTATCTAGCGA+AGG - chr7_4:60177829-60177848 Msa1167680:intron 40.0%
! TTCAACTTCCCGGTATTTTG+AGG - chr7_4:60178161-60178180 Msa1167680:intron 40.0%
TATTTGGGCCTCAAAATACC+GGG + chr7_4:60178172-60178191 None:intergenic 40.0%
TCAGAGATTAGATTGCGTGA+AGG - chr7_4:60178469-60178488 Msa1167680:intron 40.0%
CAGAGATTAGATTGCGTGAA+GGG - chr7_4:60178470-60178489 Msa1167680:intron 40.0%
TGCTTGGTTAGGACATCAAT+TGG + chr7_4:60178505-60178524 None:intergenic 40.0%
!! TCTCAATGGCTCTGATGATT+TGG - chr7_4:60178525-60178544 Msa1167680:CDS 40.0%
TGACGACATCAAAATGCATC+TGG - chr7_4:60178737-60178756 Msa1167680:intron 40.0%
AAATGCATCTGGATCTTGAC+AGG - chr7_4:60178748-60178767 Msa1167680:intron 40.0%
AATGCATCTGGATCTTGACA+GGG - chr7_4:60178749-60178768 Msa1167680:intron 40.0%
ACCAACCCATGTGGAATATT+GGG - chr7_4:60178776-60178795 Msa1167680:intron 40.0%
TACCTCCCAATATTCCACAT+GGG + chr7_4:60178784-60178803 None:intergenic 40.0%
ATACCTCCCAATATTCCACA+TGG + chr7_4:60178785-60178804 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr7_4:60178935-60178954 None:intergenic 40.0%
TGCTTATATTTAGGGACGGA+GGG + chr7_4:60179014-60179033 None:intergenic 40.0%
!! GCAAAGCGGGCTTTTATATA+GGG - chr7_4:60179302-60179321 Msa1167680:intron 40.0%
TGCAACACATTTGGCCATTA+TGG - chr7_4:60179406-60179425 Msa1167680:intron 40.0%
ACACATTTGGCCATTATGGT+CGG - chr7_4:60179410-60179429 Msa1167680:intron 40.0%
GCTAGCTGAATCTCGAAAAA+AGG - chr7_4:60179508-60179527 Msa1167680:intron 40.0%
TGTAAAAGGTCCTTCACATC+TGG + chr7_4:60179620-60179639 None:intergenic 40.0%
! GATGTGAAGGACCTTTTACA+TGG - chr7_4:60179620-60179639 Msa1167680:intron 40.0%
!! ATACCTTGGCCTTGTATATG+TGG + chr7_4:60179751-60179770 None:intergenic 40.0%
CATCCTTACTGAAATGTGCT+TGG - chr7_4:60180068-60180087 Msa1167680:intron 40.0%
ACACCAAGCACATTTCAGTA+AGG + chr7_4:60180074-60180093 None:intergenic 40.0%
!! ATGTGCTTGGTGTTTCTCTA+TGG - chr7_4:60180081-60180100 Msa1167680:intron 40.0%
GAATCAAGAAGCTGAAGATG+AGG - chr7_4:60180153-60180172 Msa1167680:intron 40.0%
TCATCATCATGCAACAGTTG+TGG + chr7_4:60180193-60180212 None:intergenic 40.0%
!! AGTATAGCTTTGTCCTCTTC+AGG + chr7_4:60180235-60180254 None:intergenic 40.0%
TGAAGAGGACAAAGCTATAC+TGG - chr7_4:60180234-60180253 Msa1167680:intron 40.0%
AGAGCAGCAAAAACGAATTC+AGG - chr7_4:60180368-60180387 Msa1167680:intron 40.0%
GAAACAATACCTGTGAATCG+AGG + chr7_4:60180509-60180528 None:intergenic 40.0%
!! CCAACTTTTAAGGAGGAAAG+AGG + chr7_4:60180707-60180726 None:intergenic 40.0%
CCTCTTTCCTCCTTAAAAGT+TGG - chr7_4:60180704-60180723 Msa1167680:intron 40.0%
!! TCTAGTGCCAACTTTTAAGG+AGG + chr7_4:60180714-60180733 None:intergenic 40.0%
! GCATCTAGTGCCAACTTTTA+AGG + chr7_4:60180717-60180736 None:intergenic 40.0%
TATTGGAGCAGGTTTATTGG+TGG - chr7_4:60180845-60180864 Msa1167680:intron 40.0%
TATTTCAACCGTGTTCACAC+CGG - chr7_4:60180898-60180917 Msa1167680:intron 40.0%
TGTCATGATCATAGTGAGTC+TGG + chr7_4:60180945-60180964 None:intergenic 40.0%
TTGTACCCTTGCACAATCTT+TGG + chr7_4:60180976-60180995 None:intergenic 40.0%
TACACTATAGAGAAAGACGG+CGG - chr7_4:60181045-60181064 Msa1167680:CDS 40.0%
TAGTTAGTGTGTTATGTCGG+TGG + chr7_4:60181152-60181171 None:intergenic 40.0%
TGGGAATACTCTCACAAGAA+AGG - chr7_4:60181248-60181267 Msa1167680:intron 40.0%
TATGAAATTATCGGCGGTAG+CGG + chr7_4:60181331-60181350 None:intergenic 40.0%
ACCGCCGATAATTTCATATC+AGG - chr7_4:60181333-60181352 Msa1167680:CDS 40.0%
GCCTGATATGAAATTATCGG+CGG + chr7_4:60181337-60181356 None:intergenic 40.0%
ACAGCTTCCCTCAAATCAAA+AGG + chr7_4:60181386-60181405 None:intergenic 40.0%
! TTCTAGGAAGGAACACCATA+CGG + chr7_4:60181601-60181620 None:intergenic 40.0%
ACTCGATAAGAATCTCGAGA+TGG - chr7_4:60181624-60181643 Msa1167680:CDS 40.0%
CTCGATAAGAATCTCGAGAT+GGG - chr7_4:60181625-60181644 Msa1167680:CDS 40.0%
TCAATCGAATTTCCCCACAC+AGG + chr7_4:60175116-60175135 None:intergenic 45.0%
TAACAACATCGCCAAGGGTT+AGG - chr7_4:60175144-60175163 Msa1167680:three_prime_UTR 45.0%
AACAACATCGCCAAGGGTTA+GGG - chr7_4:60175145-60175164 Msa1167680:three_prime_UTR 45.0%
TAGGGTTAAACAATGGCGAG+CGG - chr7_4:60175163-60175182 Msa1167680:three_prime_UTR 45.0%
ATTGAGCGCGATGTTACTCA+AGG - chr7_4:60175771-60175790 Msa1167680:CDS 45.0%
CAACAGACCTAAACCCTGTT+TGG + chr7_4:60176247-60176266 None:intergenic 45.0%
CAAACAGGGTTTAGGTCTGT+TGG - chr7_4:60176245-60176264 Msa1167680:intron 45.0%
TTACATGGGACATGTTCCTG+AGG + chr7_4:60176345-60176364 None:intergenic 45.0%
CTTCTAACCCCCTCAAGATT+TGG - chr7_4:60176450-60176469 Msa1167680:CDS 45.0%
CGTTAGGACATGACAATGGT+TGG - chr7_4:60176695-60176714 Msa1167680:CDS 45.0%
TAGGACATGACAATGGTTGG+TGG - chr7_4:60176698-60176717 Msa1167680:CDS 45.0%
AGGACATGACAATGGTTGGT+GGG - chr7_4:60176699-60176718 Msa1167680:CDS 45.0%
TTCATTGGAGATGGTTGGGT+TGG - chr7_4:60177284-60177303 Msa1167680:CDS 45.0%
TCATTGGAGATGGTTGGGTT+GGG - chr7_4:60177285-60177304 Msa1167680:CDS 45.0%
GGCCATTAGCAACAAATCAC+AGG + chr7_4:60177431-60177450 None:intergenic 45.0%
CATAGTAACACACTGCCACT+AGG + chr7_4:60177658-60177677 None:intergenic 45.0%
GGAAGTTGAATTATAGCCCG+TGG + chr7_4:60178151-60178170 None:intergenic 45.0%
CGGGCTATAATTCAACTTCC+CGG - chr7_4:60178151-60178170 Msa1167680:CDS 45.0%
GTTCTCTAGCTAACAATGCC+TGG + chr7_4:60178295-60178314 None:intergenic 45.0%
GTTCCAGGACTGGGAAAAAA+AGG - chr7_4:60178328-60178347 Msa1167680:CDS 45.0%
!!! CTTCCTTTTTTTCCCAGTCC+TGG + chr7_4:60178334-60178353 None:intergenic 45.0%
GGACTGGGAAAAAAAGGAAG+AGG - chr7_4:60178334-60178353 Msa1167680:CDS 45.0%
CTGGGAAAAAAAGGAAGAGG+AGG - chr7_4:60178337-60178356 Msa1167680:CDS 45.0%
GTCCTAACCAAGCATCTCAA+TGG - chr7_4:60178511-60178530 Msa1167680:intron 45.0%
AGCCATTGAGATGCTTGGTT+AGG + chr7_4:60178516-60178535 None:intergenic 45.0%
ATCAGAGCCATTGAGATGCT+TGG + chr7_4:60178521-60178540 None:intergenic 45.0%
CACCAACCCATGTGGAATAT+TGG - chr7_4:60178775-60178794 Msa1167680:intron 45.0%
TCCCAATATTCCACATGGGT+TGG + chr7_4:60178780-60178799 None:intergenic 45.0%
AACCCATGTGGAATATTGGG+AGG - chr7_4:60178779-60178798 Msa1167680:intron 45.0%
CATGTGCAGAGCTCAAACAA+GGG + chr7_4:60178818-60178837 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr7_4:60178936-60178955 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr7_4:60178939-60178958 None:intergenic 45.0%
TTGTACGCAGCCTTACCATT+TGG - chr7_4:60178948-60178967 Msa1167680:intron 45.0%
GTGCTTATATTTAGGGACGG+AGG + chr7_4:60179015-60179034 None:intergenic 45.0%
!! GGCAAAGCGGGCTTTTATAT+AGG - chr7_4:60179301-60179320 Msa1167680:intron 45.0%
!! AGCGGGCTTTTATATAGGGA+CGG - chr7_4:60179306-60179325 Msa1167680:intron 45.0%
! GGCTTTTATATAGGGACGGA+GGG - chr7_4:60179310-60179329 Msa1167680:intron 45.0%
TCTCCTTGTGGTGTGTGATT+GGG - chr7_4:60179484-60179503 Msa1167680:intron 45.0%
AGGATGCAATTGATCGAGCT+AGG - chr7_4:60179528-60179547 Msa1167680:intron 45.0%
GGATGCAATTGATCGAGCTA+GGG - chr7_4:60179529-60179548 Msa1167680:intron 45.0%
! TGAGCTGCTTGCTGAACAAA+GGG - chr7_4:60179574-60179593 Msa1167680:intron 45.0%
TGGAAAGACACGTACAGAGT+TGG - chr7_4:60179640-60179659 Msa1167680:intron 45.0%
TACAGAGTTGGAAGCCTTAC+AGG - chr7_4:60179652-60179671 Msa1167680:intron 45.0%
TGACTCAATGTGAGCCTGTA+AGG + chr7_4:60179669-60179688 None:intergenic 45.0%
ATTGAGTCAGAGATGCGTAC+TGG - chr7_4:60179680-60179699 Msa1167680:intron 45.0%
AGCAAAGGTGGTTGAGTACT+GGG - chr7_4:60179706-60179725 Msa1167680:intron 45.0%
ACGTCTTGAGCAACCATTAG+AGG - chr7_4:60179902-60179921 Msa1167680:intron 45.0%
TGCTCTTGACATGATACCTG+AGG - chr7_4:60179944-60179963 Msa1167680:intron 45.0%
TCTTGACATGATACCTGAGG+AGG - chr7_4:60179947-60179966 Msa1167680:intron 45.0%
ATATACTGAGGAGGATGAGG+AGG - chr7_4:60179971-60179990 Msa1167680:intron 45.0%
!! TGATTCTCTCTAATGGGCTC+TGG + chr7_4:60180139-60180158 None:intergenic 45.0%
GGAAGCTATTGATCCTGAAG+AGG - chr7_4:60180219-60180238 Msa1167680:intron 45.0%
!! CATGGCTCCCATAGCTTTAA+AGG + chr7_4:60180445-60180464 None:intergenic 45.0%
!! CTTTAAAGCTATGGGAGCCA+TGG - chr7_4:60180443-60180462 Msa1167680:intron 45.0%
ACTCATATCCGGTGTGAACA+CGG + chr7_4:60180909-60180928 None:intergenic 45.0%
! CTTGCACAATCTTTGGAGGT+GGG + chr7_4:60180969-60180988 None:intergenic 45.0%
CACCTCCAAAGATTGTGCAA+GGG - chr7_4:60180968-60180987 Msa1167680:intron 45.0%
TACCCTTGCACAATCTTTGG+AGG + chr7_4:60180973-60180992 None:intergenic 45.0%
TTCCTTGTGTCTTCCATGAC+AGG - chr7_4:60181202-60181221 Msa1167680:intron 45.0%
TGATACCTAGGGATGACGAT+AGG - chr7_4:60181661-60181680 Msa1167680:CDS 45.0%
GATACCTAGGGATGACGATA+GGG - chr7_4:60181662-60181681 Msa1167680:CDS 45.0%
!! AAAAATTCAAATTATATATA+TGG + chr7_4:60180536-60180555 None:intergenic 5.0%
!!! TAATTTATTTTTATATTTGA+AGG - chr7_4:60180754-60180773 Msa1167680:intron 5.0%
!! CATGACAATGGTTGGTGGGT+CGG - chr7_4:60176703-60176722 Msa1167680:CDS 50.0%
! ATGTTGCCTCTGGTTTCGAC+TGG - chr7_4:60177052-60177071 Msa1167680:intron 50.0%
TGTACACCAGTCGAAACCAG+AGG + chr7_4:60177061-60177080 None:intergenic 50.0%
! CATTGGAGATGGTTGGGTTG+GGG - chr7_4:60177286-60177305 Msa1167680:CDS 50.0%
GGTTAGGACATCAATTGGCC+TGG + chr7_4:60178500-60178519 None:intergenic 50.0%
GCATGTGCAGAGCTCAAACA+AGG + chr7_4:60178819-60178838 None:intergenic 50.0%
! GGGCTTTTATATAGGGACGG+AGG - chr7_4:60179309-60179328 Msa1167680:intron 50.0%
!! GAAGAAGGTGCCGACCATAA+TGG + chr7_4:60179423-60179442 None:intergenic 50.0%
CTTCATGTAGGCTCTCCTTG+TGG - chr7_4:60179472-60179491 Msa1167680:intron 50.0%
CTCTCCTTGTGGTGTGTGAT+TGG - chr7_4:60179483-60179502 Msa1167680:intron 50.0%
! CTGAGCTGCTTGCTGAACAA+AGG - chr7_4:60179573-60179592 Msa1167680:intron 50.0%
! GAGCTGCTTGCTGAACAAAG+GGG - chr7_4:60179575-60179594 Msa1167680:intron 50.0%
! CTTCACATCTGGCTCAACAC+TGG + chr7_4:60179609-60179628 None:intergenic 50.0%
! CAGTGTTGAGCCAGATGTGA+AGG - chr7_4:60179607-60179626 Msa1167680:intron 50.0%
! GATGCGTACTGGTACAGCAA+AGG - chr7_4:60179691-60179710 Msa1167680:intron 50.0%
CAGCAAAGGTGGTTGAGTAC+TGG - chr7_4:60179705-60179724 Msa1167680:intron 50.0%
!! AAAGGTGGTTGAGTACTGGG+AGG - chr7_4:60179709-60179728 Msa1167680:intron 50.0%
!! CCTTGGCCTTGTATATGTGG+AGG + chr7_4:60179748-60179767 None:intergenic 50.0%
CCTCCACATATACAAGGCCA+AGG - chr7_4:60179745-60179764 Msa1167680:intron 50.0%
! ATCATGTCAAGAGCACGCTC+CGG + chr7_4:60179939-60179958 None:intergenic 50.0%
! ACCTGAGGAGGCATATACTG+AGG - chr7_4:60179959-60179978 Msa1167680:intron 50.0%
TCCTCAGTATATGCCTCCTC+AGG + chr7_4:60179963-60179982 None:intergenic 50.0%
! TGAGGAGGCATATACTGAGG+AGG - chr7_4:60179962-60179981 Msa1167680:intron 50.0%
GGCATATACTGAGGAGGATG+AGG - chr7_4:60179968-60179987 Msa1167680:intron 50.0%
GATGAGGAGGAGGATGCTAA+AGG - chr7_4:60179984-60180003 Msa1167680:intron 50.0%
CAAGAAGCTGAAGATGAGGC+TGG - chr7_4:60180157-60180176 Msa1167680:intron 50.0%
CGTATAGGAGCGGAAACGTA+TGG - chr7_4:60180335-60180354 Msa1167680:intron 50.0%
GCGGAAACGTATGGCTGTAA+TGG - chr7_4:60180344-60180363 Msa1167680:intron 50.0%
TAAAGCTATGGGAGCCATGG+AGG - chr7_4:60180446-60180465 Msa1167680:intron 50.0%
TGAAGTGAGCCTCGATTCAC+AGG - chr7_4:60180497-60180516 Msa1167680:intron 50.0%
GGCATGACAAGTACAGACCA+AGG - chr7_4:60180866-60180885 Msa1167680:intron 50.0%
GTGTTCACACCGGATATGAG+TGG - chr7_4:60180908-60180927 Msa1167680:intron 50.0%
! CCTTGCACAATCTTTGGAGG+TGG + chr7_4:60180970-60180989 None:intergenic 50.0%
CCACCTCCAAAGATTGTGCA+AGG - chr7_4:60180967-60180986 Msa1167680:intron 50.0%
ATAGAGAAAGACGGCGGCAA+TGG - chr7_4:60181051-60181070 Msa1167680:CDS 50.0%
TAGAGAAAGACGGCGGCAAT+GGG - chr7_4:60181052-60181071 Msa1167680:CDS 50.0%
CTTCATATGGTGGTCCTGCA+TGG + chr7_4:60181098-60181117 None:intergenic 50.0%
AGCCTGTCATGGAAGACACA+AGG + chr7_4:60181207-60181226 None:intergenic 50.0%
ACAATGCGGAAAGCCTGTCA+TGG + chr7_4:60181218-60181237 None:intergenic 50.0%
AATCTCGAGATGGGTCTCTC+CGG - chr7_4:60181634-60181653 Msa1167680:CDS 50.0%
!!! ACTAGTTTTCCGGCGGTGGT+CGG + chr7_4:60175251-60175270 None:intergenic 55.0%
!!! GTGACCGGCGACTAGTTTTC+CGG + chr7_4:60175261-60175280 None:intergenic 55.0%
CATCTGAATCTCGGCGTGAC+CGG + chr7_4:60175276-60175295 None:intergenic 55.0%
!! AGATGGTTGGGTTGGGGATC+TGG - chr7_4:60177292-60177311 Msa1167680:CDS 55.0%
TCGAGCTGAGTTCCAGGACT+GGG - chr7_4:60178319-60178338 Msa1167680:CDS 55.0%
GCTCCCAATCACACACCACA+AGG + chr7_4:60179490-60179509 None:intergenic 55.0%
ATTGATCGAGCTAGGGTGCG+TGG - chr7_4:60179536-60179555 Msa1167680:intron 55.0%
TGTTCAGCAAGCAGCTCAGC+AGG + chr7_4:60179572-60179591 None:intergenic 55.0%
! GCGTACTGGTACAGCAAAGG+TGG - chr7_4:60179694-60179713 Msa1167680:intron 55.0%
TACTGAGGAGGATGAGGAGG+AGG - chr7_4:60179974-60179993 Msa1167680:intron 55.0%
GAGGATGGAGACGCAGTGTT+TGG - chr7_4:60180465-60180484 Msa1167680:intron 55.0%
GGAGACGCAGTGTTTGGATC+TGG - chr7_4:60180471-60180490 Msa1167680:intron 55.0%
AGAGAAAGACGGCGGCAATG+GGG - chr7_4:60181053-60181072 Msa1167680:CDS 55.0%
! GAAATTATCGGCGGTAGCGG+TGG + chr7_4:60181328-60181347 None:intergenic 55.0%
TCTCCGGCGAGTGATACCTA+GGG - chr7_4:60181650-60181669 Msa1167680:CDS 55.0%
CATCCCTAGGTATCACTCGC+CGG + chr7_4:60181656-60181675 None:intergenic 55.0%
CAGACCCTATCGTCATCCCT+AGG + chr7_4:60181669-60181688 None:intergenic 55.0%
ACCGCCGGAAAACTAGTCGC+CGG - chr7_4:60175254-60175273 Msa1167680:three_prime_UTR 60.0%
!!! ACCGGCGACTAGTTTTCCGG+CGG + chr7_4:60175258-60175277 None:intergenic 60.0%
ACGTGCTCGAGCTGAGTTCC+AGG - chr7_4:60178313-60178332 Msa1167680:CDS 60.0%
CTCGAGCTGAGTTCCAGGAC+TGG - chr7_4:60178318-60178337 Msa1167680:CDS 60.0%
CAGGGCAACACCAACCCATG+TGG - chr7_4:60178767-60178786 Msa1167680:intron 60.0%
! ACGCGGGAGCTTTAGTGCAC+CGG + chr7_4:60178890-60178909 None:intergenic 60.0%
ACTAAAGCTCCCGCGTACGC+AGG - chr7_4:60178894-60178913 Msa1167680:intron 60.0%
CTAAAGCTCCCGCGTACGCA+GGG - chr7_4:60178895-60178914 Msa1167680:intron 60.0%
! AAATGGTGGGACCCCTTCCC+CGG + chr7_4:60178922-60178941 None:intergenic 60.0%
TCAGCAAGCAGCTCAGCAGG+AGG + chr7_4:60179569-60179588 None:intergenic 60.0%
GCTATGGGAGCCATGGAGGA+TGG - chr7_4:60180450-60180469 Msa1167680:intron 60.0%
CACTGCGTCTCCATCCTCCA+TGG + chr7_4:60180463-60180482 None:intergenic 60.0%
CTCTCCGGCGAGTGATACCT+AGG - chr7_4:60181649-60181668 Msa1167680:CDS 60.0%
ATTCCGACTCCGACCACCGC+CGG - chr7_4:60175239-60175258 Msa1167680:three_prime_UTR 65.0%
TTTCCGGCGGTGGTCGGAGT+CGG + chr7_4:60175245-60175264 None:intergenic 65.0%
!!! GGCGACTAGTTTTCCGGCGG+TGG + chr7_4:60175255-60175274 None:intergenic 65.0%
! GATTGCGTGAAGGGCGTGCC+AGG - chr7_4:60178479-60178498 Msa1167680:intron 65.0%
! CGCGGGAGCTTTAGTGCACC+GGG + chr7_4:60178889-60178908 None:intergenic 65.0%
GGGGAAGGGGTCCCACCATT+TGG - chr7_4:60178921-60178940 Msa1167680:intron 65.0%
TTCCCCGGACCCTGCGTACG+CGG + chr7_4:60178907-60178926 None:intergenic 70.0%
CGTACGCAGGGTCCGGGGAA+GGG - chr7_4:60178907-60178926 Msa1167680:intron 70.0%
GTACGCAGGGTCCGGGGAAG+GGG - chr7_4:60178908-60178927 Msa1167680:intron 70.0%
GCTCCCGCGTACGCAGGGTC+CGG - chr7_4:60178900-60178919 Msa1167680:intron 75.0%
CTCCCGCGTACGCAGGGTCC+GGG - chr7_4:60178901-60178920 Msa1167680:intron 75.0%
TCCCGCGTACGCAGGGTCCG+GGG - chr7_4:60178902-60178921 Msa1167680:intron 75.0%
TCCCCGGACCCTGCGTACGC+GGG + chr7_4:60178906-60178925 None:intergenic 75.0%
GCGTACGCAGGGTCCGGGGA+AGG - chr7_4:60178906-60178925 Msa1167680:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60175090 60181790 60175090 ID=Msa1167680;Name=Msa1167680
chr7_4 mRNA 60175090 60181790 60175090 ID=Msa1167680-mRNA-1;Parent=Msa1167680;Name=Msa1167680-mRNA-1;_AED=0.03;_eAED=0.03;_QI=85|1|1|1|1|1|13|447|647
chr7_4 exon 60175090 60175656 60175090 ID=Msa1167680-mRNA-1:exon:18764;Parent=Msa1167680-mRNA-1
chr7_4 exon 60175758 60176024 60175758 ID=Msa1167680-mRNA-1:exon:18763;Parent=Msa1167680-mRNA-1
chr7_4 exon 60176362 60176538 60176362 ID=Msa1167680-mRNA-1:exon:18762;Parent=Msa1167680-mRNA-1
chr7_4 exon 60176625 60176773 60176625 ID=Msa1167680-mRNA-1:exon:18761;Parent=Msa1167680-mRNA-1
chr7_4 exon 60176875 60177025 60176875 ID=Msa1167680-mRNA-1:exon:18760;Parent=Msa1167680-mRNA-1
chr7_4 exon 60177114 60177398 60177114 ID=Msa1167680-mRNA-1:exon:18759;Parent=Msa1167680-mRNA-1
chr7_4 exon 60178080 60178175 60178080 ID=Msa1167680-mRNA-1:exon:18758;Parent=Msa1167680-mRNA-1
chr7_4 exon 60178298 60178438 60178298 ID=Msa1167680-mRNA-1:exon:18757;Parent=Msa1167680-mRNA-1
chr7_4 exon 60178522 60178584 60178522 ID=Msa1167680-mRNA-1:exon:18756;Parent=Msa1167680-mRNA-1
chr7_4 exon 60179313 60179384 60179313 ID=Msa1167680-mRNA-1:exon:18755;Parent=Msa1167680-mRNA-1
chr7_4 exon 60181029 60181128 60181029 ID=Msa1167680-mRNA-1:exon:18754;Parent=Msa1167680-mRNA-1
chr7_4 exon 60181295 60181386 60181295 ID=Msa1167680-mRNA-1:exon:18753;Parent=Msa1167680-mRNA-1
chr7_4 exon 60181475 60181790 60181475 ID=Msa1167680-mRNA-1:exon:18752;Parent=Msa1167680-mRNA-1
chr7_4 five_prime_UTR 60181706 60181790 60181706 ID=Msa1167680-mRNA-1:five_prime_utr;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60181475 60181705 60181475 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60181295 60181386 60181295 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60181029 60181128 60181029 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60179313 60179384 60179313 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60178522 60178584 60178522 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60178298 60178438 60178298 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60178080 60178175 60178080 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60177114 60177398 60177114 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60176875 60177025 60176875 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60176625 60176773 60176625 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60176362 60176538 60176362 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60175758 60176024 60175758 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 CDS 60175537 60175656 60175537 ID=Msa1167680-mRNA-1:cds;Parent=Msa1167680-mRNA-1
chr7_4 three_prime_UTR 60175090 60175536 60175090 ID=Msa1167680-mRNA-1:three_prime_utr;Parent=Msa1167680-mRNA-1
Gene Sequence

>Msa1167680

ATGGCGAGCGGTAGTAGTAGAAAATCTCGAAGACGAAGAAGATCCGATGATGACTCTGCATCTGATTCCGACTCCGACCACCGCCGGAAAACTAGTCGCCGGTCACGCCGAGATTCAGATGATGATTCAAGTGACGACAACGATAATAGAACTGGAAGAAAGAAGAAATCTTCCAGAACAATCACAGAAGAGGAAATTTCACAGTACATGGCTAAAAAAGCTCAGAGAAAGGCTACGAAAGTTGCTAAGAAATTGAAGACGAATACAGTATCGGGTTATTCCAATGATTCTAATCCATTTGGTGATACTAATCTCAATGAAAAGTTTGTTTGGCGTAAGAAGATTGAGCGCGATGTTACTCAAGGTGTATCAATTGATTCCTTTTCTGTTAAAGCTGAGAAGAAAAGACAAGTAGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCACTTGAGAAAGCACAACATGAAGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTTGATCAAAGCAAAGTCAGGTCAGAGATTAGATTGCGTGAAGGGCGTGCCAGGCCAATTGATGTCCTAACCAAGCATCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACGGTTAAAGAAATGAGTGAACTTCGTGACGACATCAAAATGCATCTGGATCTTGACAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGTGATTGGGAGCTAGCTGAATCTCGAAAAAAGGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCTGAACAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGGACCTTTTACATGGAAAGACACGTACAGAGTTGGAAGCCTTACAGGCTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAGATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAGCAACCATTAGAGGATGAAGATAAACCGGAGCGTGCTCTTGACATGATACCTGAGGAGGCATATACTGAGGAGGATGAGGAGGAGGATGCTAAAGTAGTCCGTTCTGCTGATGAATCATTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGATGAGGCTGGATCATTTTCACCACAACTGTTGCATGATGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAAAGCTATACTGGAGCGGAAACGTATGGCTGTAATGGAAGAGCAGCAAAAACGAATTCAGGAAGCAATGGCATCAAAGCCAGCTCCATCTGAAGATAATTTAGAGTTGAAAGCCTTTAAAGCTATGGGAGCCATGGAGGATGGAGACGCAGTGTTTGGATCTGGAGCTGAAGTGAGCCTCGATTCACAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGTGTTCACACCGGATATGAGTGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGGTACAAATTTAACATTTTCTATCCTGATCTTGTAGACAAGATAAAAGCCCCGAACTACACTATAGAGAAAGACGGCGGCAATGGGGAGACATGCATTATTAGATTCCATGCAGGACCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATACTCTCACAAGAAAGGTTTTAAATGCACATTCGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGCCGATAA

Protein sequence

>Msa1167680

MASGSSRKSRRRRRSDDDSASDSDSDHRRKTSRRSRRDSDDDSSDDNDNRTGRKKKSSRTITEEEISQYMAKKAQRKATKVAKKLKTNTVSGYSNDSNPFGDTNLNEKFVWRKKIERDVTQGVSIDSFSVKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKDLLHGKTRTELEALQAHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDKPERALDMIPEEAYTEEDEEEDAKVVRSADESFSPEPIRENQEAEDEAGSFSPQLLHDDENEEAIDPEEDKAILERKRMAVMEEQQKRIQEAMASKPAPSEDNLELKAFKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIEKDGGNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR*