Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042110 | XP_013450066.1 | 97.021 | 235 | 4 | 1 | 1 | 235 | 1 | 232 | 1.54e-167 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042110 | sp|Q9LZR0|ATB51_ARATH | 52.299 | 174 | 64 | 4 | 16 | 174 | 25 | 194 | 9.89e-46 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042110 | A0A072U315 | 97.021 | 235 | 4 | 1 | 1 | 235 | 1 | 232 | 7.37e-168 | 471 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1042110 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1042110 | Msa1079930 | 0.824074 | 9.830252e-54 | -8.615850e-47 |
| Msa1042110 | Msa1124860 | 0.885373 | 8.601197e-72 | -8.615850e-47 |
| Msa1042110 | Msa1167530 | 0.871900 | 4.804848e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042110 | MtrunA17_Chr7g0265521 | 97.021 | 235 | 4 | 1 | 1 | 235 | 1 | 232 | 1.42e-171 | 471 |
| Msa1042110 | MtrunA17_Chr1g0179581 | 73.000 | 100 | 25 | 1 | 46 | 145 | 13 | 110 | 5.97e-46 | 149 |
| Msa1042110 | MtrunA17_Chr8g0362151 | 45.652 | 138 | 59 | 2 | 21 | 151 | 44 | 172 | 7.16e-33 | 120 |
| Msa1042110 | MtrunA17_Chr6g0450991 | 58.824 | 102 | 35 | 1 | 62 | 156 | 66 | 167 | 7.25e-32 | 117 |
| Msa1042110 | MtrunA17_Chr5g0416391 | 50.926 | 108 | 46 | 1 | 51 | 151 | 65 | 172 | 2.75e-30 | 113 |
| Msa1042110 | MtrunA17_Chr4g0060031 | 48.889 | 135 | 49 | 4 | 62 | 176 | 94 | 228 | 5.27e-30 | 114 |
| Msa1042110 | MtrunA17_Chr3g0119291 | 47.761 | 134 | 68 | 2 | 56 | 187 | 52 | 185 | 1.12e-29 | 111 |
| Msa1042110 | MtrunA17_Chr3g0123691 | 46.774 | 124 | 57 | 2 | 41 | 155 | 36 | 159 | 1.06e-28 | 109 |
| Msa1042110 | MtrunA17_Chr7g0217111 | 48.462 | 130 | 63 | 2 | 51 | 176 | 67 | 196 | 1.23e-28 | 108 |
| Msa1042110 | MtrunA17_Chr6g0453021 | 55.435 | 92 | 41 | 0 | 62 | 153 | 95 | 186 | 4.42e-28 | 107 |
| Msa1042110 | MtrunA17_Chr8g0381741 | 46.341 | 123 | 58 | 2 | 40 | 155 | 32 | 153 | 1.13e-27 | 107 |
| Msa1042110 | MtrunA17_Chr5g0415941 | 55.670 | 97 | 36 | 1 | 63 | 152 | 87 | 183 | 7.46e-27 | 105 |
| Msa1042110 | MtrunA17_Chr3g0127511 | 37.179 | 156 | 84 | 3 | 65 | 220 | 40 | 181 | 6.83e-25 | 98.6 |
| Msa1042110 | MtrunA17_Chr8g0362751 | 52.577 | 97 | 39 | 1 | 63 | 152 | 89 | 185 | 8.19e-25 | 99.4 |
| Msa1042110 | MtrunA17_Chr8g0346251 | 42.857 | 119 | 56 | 3 | 67 | 175 | 45 | 161 | 3.88e-21 | 88.6 |
| Msa1042110 | MtrunA17_Chr4g0054421 | 47.368 | 95 | 50 | 0 | 56 | 150 | 120 | 214 | 1.76e-20 | 87.4 |
| Msa1042110 | MtrunA17_Chr5g0403701 | 47.826 | 92 | 48 | 0 | 63 | 154 | 53 | 144 | 1.27e-19 | 83.6 |
| Msa1042110 | MtrunA17_Chr4g0055851 | 44.211 | 95 | 52 | 1 | 56 | 150 | 114 | 207 | 2.72e-18 | 81.6 |
| Msa1042110 | MtrunA17_Chr1g0175651 | 42.105 | 95 | 55 | 0 | 56 | 150 | 147 | 241 | 1.03e-17 | 80.1 |
| Msa1042110 | MtrunA17_Chr5g0403691 | 47.475 | 99 | 45 | 2 | 63 | 154 | 53 | 151 | 1.66e-17 | 78.2 |
| Msa1042110 | MtrunA17_Chr1g0151971 | 44.330 | 97 | 54 | 0 | 54 | 150 | 121 | 217 | 2.00e-17 | 79.3 |
| Msa1042110 | MtrunA17_Chr7g0258831 | 41.935 | 93 | 54 | 0 | 58 | 150 | 155 | 247 | 4.52e-17 | 78.6 |
| Msa1042110 | MtrunA17_Chr5g0399491 | 45.455 | 88 | 48 | 0 | 63 | 150 | 136 | 223 | 1.22e-16 | 77.4 |
| Msa1042110 | MtrunA17_Chr5g0400781 | 44.681 | 94 | 51 | 1 | 56 | 149 | 117 | 209 | 2.11e-16 | 76.3 |
| Msa1042110 | MtrunA17_Chr2g0308611 | 40.000 | 100 | 60 | 0 | 51 | 150 | 188 | 287 | 2.60e-16 | 76.6 |
| Msa1042110 | MtrunA17_Chr8g0335131 | 43.182 | 88 | 50 | 0 | 63 | 150 | 146 | 233 | 1.36e-15 | 74.3 |
| Msa1042110 | MtrunA17_Chr4g0044091 | 42.268 | 97 | 55 | 1 | 54 | 150 | 57 | 152 | 1.67e-15 | 72.4 |
| Msa1042110 | MtrunA17_Chr4g0071411 | 44.048 | 84 | 47 | 0 | 66 | 149 | 91 | 174 | 2.28e-14 | 69.7 |
| Msa1042110 | MtrunA17_Chr6g0481041 | 41.000 | 100 | 54 | 2 | 61 | 158 | 28 | 124 | 8.21e-12 | 64.3 |
| Msa1042110 | MtrunA17_Chr5g0410711 | 36.937 | 111 | 64 | 2 | 51 | 158 | 77 | 184 | 9.50e-12 | 64.3 |
| Msa1042110 | MtrunA17_Chr2g0299031 | 32.667 | 150 | 91 | 4 | 4 | 150 | 27 | 169 | 1.41e-11 | 62.0 |
| Msa1042110 | MtrunA17_Chr2g0331581 | 41.463 | 82 | 48 | 0 | 66 | 147 | 145 | 226 | 1.65e-11 | 63.5 |
| Msa1042110 | MtrunA17_Chr3g0135331 | 39.535 | 86 | 51 | 1 | 50 | 135 | 133 | 217 | 1.77e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042110 | AT5G03790.1 | 52.299 | 174 | 64 | 4 | 16 | 174 | 25 | 194 | 1.00e-46 | 155 |
| Msa1042110 | AT5G03790.2 | 57.447 | 141 | 49 | 2 | 16 | 148 | 25 | 162 | 1.76e-43 | 145 |
| Msa1042110 | AT2G36610.1 | 47.879 | 165 | 68 | 3 | 10 | 156 | 8 | 172 | 1.70e-39 | 135 |
| Msa1042110 | AT1G69780.1 | 48.201 | 139 | 53 | 3 | 56 | 187 | 78 | 204 | 6.84e-32 | 118 |
| Msa1042110 | AT5G65310.1 | 55.914 | 93 | 41 | 0 | 62 | 154 | 71 | 163 | 9.43e-29 | 110 |
| Msa1042110 | AT5G65310.2 | 55.914 | 93 | 41 | 0 | 62 | 154 | 53 | 145 | 9.52e-29 | 110 |
| Msa1042110 | AT2G22430.1 | 57.143 | 98 | 35 | 1 | 62 | 152 | 61 | 158 | 1.50e-28 | 110 |
| Msa1042110 | AT5G15150.1 | 53.846 | 104 | 46 | 1 | 51 | 152 | 101 | 204 | 1.51e-28 | 110 |
| Msa1042110 | AT4G40060.1 | 45.588 | 136 | 58 | 3 | 33 | 152 | 20 | 155 | 5.24e-28 | 108 |
| Msa1042110 | AT3G01470.1 | 54.545 | 99 | 38 | 1 | 62 | 153 | 67 | 165 | 7.65e-28 | 107 |
| Msa1042110 | AT3G01220.1 | 48.000 | 125 | 54 | 3 | 38 | 151 | 58 | 182 | 2.29e-26 | 103 |
| Msa1042110 | AT1G26960.1 | 50.000 | 108 | 47 | 1 | 51 | 151 | 59 | 166 | 2.60e-26 | 102 |
| Msa1042110 | AT4G36740.2 | 52.577 | 97 | 46 | 0 | 56 | 152 | 49 | 145 | 6.12e-25 | 98.2 |
| Msa1042110 | AT4G36740.1 | 52.577 | 97 | 46 | 0 | 56 | 152 | 48 | 144 | 6.72e-25 | 98.2 |
| Msa1042110 | AT2G46680.1 | 46.364 | 110 | 48 | 2 | 47 | 149 | 20 | 125 | 1.20e-24 | 98.6 |
| Msa1042110 | AT2G46680.2 | 46.296 | 108 | 47 | 2 | 47 | 147 | 20 | 123 | 1.08e-23 | 95.9 |
| Msa1042110 | AT2G18550.1 | 42.857 | 126 | 63 | 1 | 63 | 188 | 61 | 177 | 2.43e-23 | 94.4 |
| Msa1042110 | AT1G27045.1 | 45.669 | 127 | 57 | 4 | 48 | 164 | 50 | 174 | 8.37e-23 | 92.8 |
| Msa1042110 | AT1G27045.5 | 45.669 | 127 | 57 | 4 | 48 | 164 | 7 | 131 | 1.28e-22 | 91.3 |
| Msa1042110 | AT1G27045.3 | 45.669 | 127 | 57 | 4 | 48 | 164 | 7 | 131 | 1.28e-22 | 91.3 |
| Msa1042110 | AT3G61890.1 | 47.778 | 90 | 40 | 1 | 66 | 148 | 33 | 122 | 1.64e-22 | 92.4 |
| Msa1042110 | AT1G27045.2 | 46.400 | 125 | 55 | 4 | 50 | 164 | 1 | 123 | 2.10e-22 | 90.5 |
| Msa1042110 | AT5G66700.1 | 48.913 | 92 | 47 | 0 | 63 | 154 | 71 | 162 | 6.87e-21 | 87.8 |
| Msa1042110 | AT1G27045.4 | 45.045 | 111 | 51 | 3 | 48 | 148 | 50 | 160 | 5.68e-20 | 85.9 |
| Msa1042110 | AT5G53980.1 | 44.086 | 93 | 52 | 0 | 61 | 153 | 9 | 101 | 2.73e-18 | 79.3 |
| Msa1042110 | AT5G06710.1 | 43.564 | 101 | 57 | 0 | 49 | 149 | 176 | 276 | 5.72e-18 | 81.6 |
| Msa1042110 | AT5G47370.1 | 41.489 | 94 | 55 | 0 | 56 | 149 | 123 | 216 | 1.18e-16 | 77.4 |
| Msa1042110 | AT4G16780.1 | 42.105 | 95 | 54 | 1 | 56 | 150 | 123 | 216 | 1.40e-16 | 77.4 |
| Msa1042110 | AT2G22800.1 | 45.977 | 87 | 47 | 0 | 63 | 149 | 113 | 199 | 2.28e-16 | 76.6 |
| Msa1042110 | AT3G60390.1 | 41.053 | 95 | 56 | 0 | 56 | 150 | 155 | 249 | 6.32e-16 | 75.9 |
| Msa1042110 | AT2G44910.1 | 43.182 | 88 | 50 | 0 | 63 | 150 | 163 | 250 | 1.16e-15 | 75.1 |
| Msa1042110 | AT2G01430.1 | 44.211 | 95 | 53 | 0 | 56 | 150 | 132 | 226 | 2.15e-15 | 73.9 |
| Msa1042110 | AT4G37790.1 | 44.318 | 88 | 49 | 0 | 63 | 150 | 126 | 213 | 3.35e-15 | 73.6 |
| Msa1042110 | AT4G17460.1 | 39.000 | 100 | 61 | 0 | 51 | 150 | 123 | 222 | 4.14e-15 | 73.2 |
| Msa1042110 | AT1G79840.2 | 38.462 | 104 | 62 | 1 | 57 | 158 | 125 | 228 | 7.75e-14 | 70.9 |
| Msa1042110 | AT1G79840.1 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 7.82e-14 | 70.9 |
| Msa1042110 | AT1G79840.5 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 8.58e-14 | 70.5 |
| Msa1042110 | AT1G79840.3 | 38.462 | 104 | 62 | 1 | 57 | 158 | 38 | 141 | 8.81e-14 | 70.5 |
| Msa1042110 | AT1G79840.6 | 38.462 | 104 | 62 | 1 | 57 | 158 | 38 | 141 | 8.81e-14 | 70.5 |
| Msa1042110 | AT1G79840.4 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 1.31e-13 | 70.1 |
| Msa1042110 | AT1G73360.1 | 43.000 | 100 | 52 | 2 | 61 | 158 | 31 | 127 | 1.14e-12 | 67.4 |
| Msa1042110 | AT1G70920.2 | 35.659 | 129 | 77 | 2 | 22 | 150 | 4 | 126 | 1.70e-12 | 64.3 |
| Msa1042110 | AT1G70920.1 | 35.659 | 129 | 77 | 2 | 22 | 150 | 34 | 156 | 2.09e-12 | 64.3 |
| Msa1042110 | AT5G06710.4 | 48.485 | 66 | 34 | 0 | 49 | 114 | 176 | 241 | 5.27e-12 | 64.3 |
| Msa1042110 | AT5G46880.3 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.98e-11 | 62.4 |
| Msa1042110 | AT5G46880.1 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.98e-11 | 62.4 |
| Msa1042110 | AT5G46880.2 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.98e-11 | 62.4 |
| Msa1042110 | AT3G61150.1 | 33.333 | 120 | 71 | 2 | 51 | 168 | 99 | 211 | 7.82e-11 | 62.0 |
Find 53 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTCATCTTCCTTTC+AGG | 0.091903 | 7_1:+79862050 | None:intergenic |
| TCCACCTTGTACGCCTATTT+TGG | 0.171135 | 7_1:+79861985 | None:intergenic |
| TTGCTGTTTGGTTCCAAAAT+AGG | 0.192526 | 7_1:-79861998 | Msa1042110:CDS |
| GATAATTAGGTACCTCTTCT+TGG | 0.238895 | 7_1:+79861886 | None:intergenic |
| TACTAGTAGTTAGGTATTAA+TGG | 0.239424 | 7_1:-79860672 | Msa1042110:three_prime_UTR |
| GGTCTAACTTTATTTCTTCT+TGG | 0.251946 | 7_1:+79862072 | None:intergenic |
| TTTGGAACCAAACAGCAATT+TGG | 0.278055 | 7_1:+79862003 | None:intergenic |
| TTGACTTATAATGTAGATTA+GGG | 0.282962 | 7_1:+79860745 | None:intergenic |
| TTTGACTTATAATGTAGATT+AGG | 0.293903 | 7_1:+79860744 | None:intergenic |
| GTAGATTAGGGATAATAATT+AGG | 0.330622 | 7_1:+79860757 | None:intergenic |
| TTGTTATTGTATCCCTGATC+TGG | 0.353848 | 7_1:+79860871 | None:intergenic |
| TATAACAACACCCCTTATTC+AGG | 0.354916 | 7_1:-79862745 | Msa1042110:intron |
| AAAGCTTCATCTTCCTTTCA+GGG | 0.372499 | 7_1:+79862051 | None:intergenic |
| AACCTCGCCAAATTGCTGTT+TGG | 0.376064 | 7_1:-79862010 | Msa1042110:CDS |
| TGTTGAATGCTACTATTTGT+TGG | 0.395823 | 7_1:+79860901 | None:intergenic |
| GGAAATGAGTCAACCGTCAT+TGG | 0.398063 | 7_1:-79862213 | Msa1042110:CDS |
| TCAACAAGCTGTTCCAGATC+AGG | 0.398083 | 7_1:-79860884 | Msa1042110:CDS |
| AAGTAACCAGATTGATTCAT+TGG | 0.402120 | 7_1:-79862105 | Msa1042110:CDS |
| GGATAATAATTAGGCAATAC+AGG | 0.433929 | 7_1:+79860766 | None:intergenic |
| ATGAAGCTTTCAAGAGAGCT+AGG | 0.447660 | 7_1:-79862038 | Msa1042110:CDS |
| ATAGTTGTAGAAGAAGCTTA+AGG | 0.450197 | 7_1:+79862765 | None:intergenic |
| ATGGATGAAATGAACATTGA+TGG | 0.450308 | 7_1:-79862161 | Msa1042110:CDS |
| ACAGGCCAGTGACATTGATT+AGG | 0.461524 | 7_1:+79860784 | None:intergenic |
| AGTTAGGTATTAATGGTTTG+AGG | 0.469550 | 7_1:-79860665 | Msa1042110:three_prime_UTR |
| TCTTCTCCAATGAATCAATC+TGG | 0.471568 | 7_1:+79862099 | None:intergenic |
| AAACAGCAATTTGGCGAGGT+TGG | 0.478872 | 7_1:+79862012 | None:intergenic |
| GGTTCCAAAATAGGCGTACA+AGG | 0.492609 | 7_1:-79861989 | Msa1042110:CDS |
| ATGTTCATTTCATCCATAGC+TGG | 0.495881 | 7_1:+79862167 | None:intergenic |
| AGTGAAAGCCTAAAATGGAT+TGG | 0.500919 | 7_1:-79862828 | Msa1042110:exon |
| CTTAAGGAAGACTCGGTATG+AGG | 0.509787 | 7_1:+79862781 | None:intergenic |
| GAAATGAGTCAACCGTCATT+GGG | 0.510295 | 7_1:-79862212 | Msa1042110:CDS |
| AGAATTTGATGTTGTCTCCA+AGG | 0.530430 | 7_1:-79861922 | Msa1042110:CDS |
| ATATCCCATATAGTTCTGAA+TGG | 0.532778 | 7_1:+79860628 | None:intergenic |
| GACTCGGTATGAGGAACAAA+GGG | 0.536486 | 7_1:+79862790 | None:intergenic |
| ACAAAGGTTACTTCCAGCTA+TGG | 0.541285 | 7_1:-79862180 | Msa1042110:CDS |
| CACACAGGTTATGAAGTTGA+AGG | 0.545029 | 7_1:-79861022 | Msa1042110:intron |
| GGAAAGCTAAAAGAGCAATC+AGG | 0.547065 | 7_1:-79861000 | Msa1042110:CDS |
| CAACAAGCTGTTCCAGATCA+GGG | 0.555767 | 7_1:-79860883 | Msa1042110:CDS |
| TGCCTCCTAATCAATGTCAC+TGG | 0.563013 | 7_1:-79860789 | Msa1042110:CDS |
| AAATAAAGTTAGACCCTGAA+AGG | 0.563460 | 7_1:-79862064 | Msa1042110:CDS |
| GGCCAGTGACATTGATTAGG+AGG | 0.565142 | 7_1:+79860787 | None:intergenic |
| ACAGTAGAAAGCACATCAGA+AGG | 0.569739 | 7_1:-79860943 | Msa1042110:CDS |
| TGAAGCTTTCAAGAGAGCTA+GGG | 0.584376 | 7_1:-79862037 | Msa1042110:CDS |
| ACACAGGTTATGAAGTTGAA+GGG | 0.593093 | 7_1:-79861021 | Msa1042110:intron |
| AGACTCGGTATGAGGAACAA+AGG | 0.604496 | 7_1:+79862789 | None:intergenic |
| TGTTGTGTCTCACCCAATGA+CGG | 0.608704 | 7_1:+79862200 | None:intergenic |
| AAATAGGCGTACAAGGTGGA+AGG | 0.609407 | 7_1:-79861982 | Msa1042110:CDS |
| AAAACAGAAACTCCAAGAAG+AGG | 0.620624 | 7_1:-79861898 | Msa1042110:intron |
| GAAGAAGCTTAAGGAAGACT+CGG | 0.638190 | 7_1:+79862774 | None:intergenic |
| AACCAAACAGCAATTTGGCG+AGG | 0.655043 | 7_1:+79862008 | None:intergenic |
| TCCAAAATAGGCGTACAAGG+TGG | 0.664815 | 7_1:-79861986 | Msa1042110:CDS |
| AAGCTAAAAGAGCAATCAGG+TGG | 0.690901 | 7_1:-79860997 | Msa1042110:CDS |
| CATTGGGTGAGACACAACAA+AGG | 0.711095 | 7_1:-79862196 | Msa1042110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGAAAAAAGAAAA+GGG | + | chr7_1:79860884-79860903 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAAAAAGAAA+AGG | + | chr7_1:79860885-79860904 | None:intergenic | 10.0% |
| !! | CTGTATAAAAAAATTAATTA+TGG | - | chr7_1:79862352-79862371 | Msa1042110:intron | 10.0% |
| !! | AAAAAAAAGAAAAAAGAAAA+GGG | + | chr7_1:79860884-79860903 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAAAAAGAAA+AGG | + | chr7_1:79860885-79860904 | None:intergenic | 10.0% |
| !! | CTGTATAAAAAAATTAATTA+TGG | - | chr7_1:79862352-79862371 | Msa1042110:intron | 10.0% |
| !! | AAAAATAGCTAAAAAAACAT+TGG | + | chr7_1:79860773-79860792 | None:intergenic | 15.0% |
| !! | AAAAAAAGAAAAAAGAAAAG+GGG | + | chr7_1:79860883-79860902 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAATTGTATGAT+AGG | - | chr7_1:79861126-79861145 | Msa1042110:intron | 15.0% |
| !! | AGAAAAAAAATTGTATGATA+GGG | - | chr7_1:79861127-79861146 | Msa1042110:intron | 15.0% |
| !! | TTATTCAAATATATTGTCAT+TGG | - | chr7_1:79861208-79861227 | Msa1042110:intron | 15.0% |
| !!! | ATAATTCAACTTCTTTTTAT+AGG | + | chr7_1:79861747-79861766 | None:intergenic | 15.0% |
| !!! | AGAAAATAGTAATTTTTGTA+AGG | + | chr7_1:79862229-79862248 | None:intergenic | 15.0% |
| !! | AAAAAAATTAATTATGGACA+TGG | - | chr7_1:79862358-79862377 | Msa1042110:intron | 15.0% |
| !! | AAAAATAGCTAAAAAAACAT+TGG | + | chr7_1:79860773-79860792 | None:intergenic | 15.0% |
| !! | AAAAAAAGAAAAAAGAAAAG+GGG | + | chr7_1:79860883-79860902 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAATTGTATGAT+AGG | - | chr7_1:79861126-79861145 | Msa1042110:intron | 15.0% |
| !! | AGAAAAAAAATTGTATGATA+GGG | - | chr7_1:79861127-79861146 | Msa1042110:intron | 15.0% |
| !! | TTATTCAAATATATTGTCAT+TGG | - | chr7_1:79861208-79861227 | Msa1042110:intron | 15.0% |
| !!! | ATAATTCAACTTCTTTTTAT+AGG | + | chr7_1:79861747-79861766 | None:intergenic | 15.0% |
| !!! | AGAAAATAGTAATTTTTGTA+AGG | + | chr7_1:79862229-79862248 | None:intergenic | 15.0% |
| !! | AAAAAAATTAATTATGGACA+TGG | - | chr7_1:79862358-79862377 | Msa1042110:intron | 15.0% |
| !!! | ATTTGAAAACTACTCAATTT+TGG | - | chr7_1:79860946-79860965 | Msa1042110:CDS | 20.0% |
| !! | CAAAAAATCCAAAGATAATT+AGG | + | chr7_1:79861596-79861615 | None:intergenic | 20.0% |
| !!! | TATCTTTGGATTTTTTGTAT+AGG | - | chr7_1:79861599-79861618 | Msa1042110:intron | 20.0% |
| !!! | AATTCAACTTTTTTCCTAAT+AGG | - | chr7_1:79861848-79861867 | Msa1042110:intron | 20.0% |
| !! | AATAATACAACTCTAACAAA+TGG | + | chr7_1:79862056-79862075 | None:intergenic | 20.0% |
| !! | TATAATGTAGAATATGTGTA+AGG | + | chr7_1:79862264-79862283 | None:intergenic | 20.0% |
| !!! | TTATGTGCTTTTTTCTATTT+CGG | - | chr7_1:79862322-79862341 | Msa1042110:intron | 20.0% |
| !! | TTGACTTATAATGTAGATTA+GGG | + | chr7_1:79862724-79862743 | None:intergenic | 20.0% |
| !!! | TTTGACTTATAATGTAGATT+AGG | + | chr7_1:79862725-79862744 | None:intergenic | 20.0% |
| !!! | ATTTGAAAACTACTCAATTT+TGG | - | chr7_1:79860946-79860965 | Msa1042110:CDS | 20.0% |
| !! | CAAAAAATCCAAAGATAATT+AGG | + | chr7_1:79861596-79861615 | None:intergenic | 20.0% |
| !!! | TATCTTTGGATTTTTTGTAT+AGG | - | chr7_1:79861599-79861618 | Msa1042110:intron | 20.0% |
| !!! | AATTCAACTTTTTTCCTAAT+AGG | - | chr7_1:79861848-79861867 | Msa1042110:intron | 20.0% |
| !! | AATAATACAACTCTAACAAA+TGG | + | chr7_1:79862056-79862075 | None:intergenic | 20.0% |
| !! | TATAATGTAGAATATGTGTA+AGG | + | chr7_1:79862264-79862283 | None:intergenic | 20.0% |
| !!! | TTATGTGCTTTTTTCTATTT+CGG | - | chr7_1:79862322-79862341 | Msa1042110:intron | 20.0% |
| !! | TTGACTTATAATGTAGATTA+GGG | + | chr7_1:79862724-79862743 | None:intergenic | 20.0% |
| !!! | TTTGACTTATAATGTAGATT+AGG | + | chr7_1:79862725-79862744 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTACCTGAATAAG+GGG | + | chr7_1:79860734-79860753 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTACCTGAATAA+GGG | + | chr7_1:79860735-79860754 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTACCTGAATA+AGG | + | chr7_1:79860736-79860755 | None:intergenic | 25.0% |
| ! | AAAAACATTGGAGTATAAAG+AGG | + | chr7_1:79860761-79860780 | None:intergenic | 25.0% |
| ! | CTCAAGATTTGTAAACTAAA+AGG | + | chr7_1:79860799-79860818 | None:intergenic | 25.0% |
| !! | TGCTTTTCAATTCATATAGA+AGG | - | chr7_1:79860911-79860930 | Msa1042110:CDS | 25.0% |
| ! | AACAATTTATGAGATGCATA+TGG | - | chr7_1:79861064-79861083 | Msa1042110:intron | 25.0% |
| ! | TAAAAATCACATAATGCAAG+AGG | + | chr7_1:79861722-79861741 | None:intergenic | 25.0% |
| !!! | TATGTGCTTTTTTCTATTTC+GGG | - | chr7_1:79862323-79862342 | Msa1042110:intron | 25.0% |
| ! | TACATAAATCAACCATTGTA+GGG | + | chr7_1:79862404-79862423 | None:intergenic | 25.0% |
| ! | GTAGATTAGGGATAATAATT+AGG | + | chr7_1:79862712-79862731 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGTACTAGTAGTT+AGG | - | chr7_1:79862785-79862804 | Msa1042110:CDS | 25.0% |
| ! | TACTAGTAGTTAGGTATTAA+TGG | - | chr7_1:79862794-79862813 | Msa1042110:CDS | 25.0% |
| !!! | TGTTTTTTTACCTGAATAAG+GGG | + | chr7_1:79860734-79860753 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTACCTGAATAA+GGG | + | chr7_1:79860735-79860754 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTACCTGAATA+AGG | + | chr7_1:79860736-79860755 | None:intergenic | 25.0% |
| ! | AAAAACATTGGAGTATAAAG+AGG | + | chr7_1:79860761-79860780 | None:intergenic | 25.0% |
| ! | CTCAAGATTTGTAAACTAAA+AGG | + | chr7_1:79860799-79860818 | None:intergenic | 25.0% |
| !! | TGCTTTTCAATTCATATAGA+AGG | - | chr7_1:79860911-79860930 | Msa1042110:CDS | 25.0% |
| ! | AACAATTTATGAGATGCATA+TGG | - | chr7_1:79861064-79861083 | Msa1042110:intron | 25.0% |
| ! | TAAAAATCACATAATGCAAG+AGG | + | chr7_1:79861722-79861741 | None:intergenic | 25.0% |
| !!! | TATGTGCTTTTTTCTATTTC+GGG | - | chr7_1:79862323-79862342 | Msa1042110:intron | 25.0% |
| ! | TACATAAATCAACCATTGTA+GGG | + | chr7_1:79862404-79862423 | None:intergenic | 25.0% |
| ! | GTAGATTAGGGATAATAATT+AGG | + | chr7_1:79862712-79862731 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGTACTAGTAGTT+AGG | - | chr7_1:79862785-79862804 | Msa1042110:CDS | 25.0% |
| ! | TACTAGTAGTTAGGTATTAA+TGG | - | chr7_1:79862794-79862813 | Msa1042110:CDS | 25.0% |
| ATAGTTGTAGAAGAAGCTTA+AGG | + | chr7_1:79860704-79860723 | None:intergenic | 30.0% | |
| AAGAAAAGGGGAAATAACTT+GGG | + | chr7_1:79860871-79860890 | None:intergenic | 30.0% | |
| AAAGAAAAGGGGAAATAACT+TGG | + | chr7_1:79860872-79860891 | None:intergenic | 30.0% | |
| CATAAGTGAGTGTCTAATTA+AGG | + | chr7_1:79860975-79860994 | None:intergenic | 30.0% | |
| GAGAAATGGTATGAATATGA+TGG | - | chr7_1:79861170-79861189 | Msa1042110:intron | 30.0% | |
| ATATTGTCATTGGTGTATGT+TGG | - | chr7_1:79861218-79861237 | Msa1042110:intron | 30.0% | |
| TTGGTGTATGTTGGAAAATT+AGG | - | chr7_1:79861227-79861246 | Msa1042110:intron | 30.0% | |
| GTATGTTGGAAAATTAGGAA+TGG | - | chr7_1:79861232-79861251 | Msa1042110:intron | 30.0% | |
| ATGGATGAAATGAACATTGA+TGG | - | chr7_1:79861305-79861324 | Msa1042110:intron | 30.0% | |
| ! | AAGTAACCAGATTGATTCAT+TGG | - | chr7_1:79861361-79861380 | Msa1042110:intron | 30.0% |
| ! | GGTCTAACTTTATTTCTTCT+TGG | + | chr7_1:79861397-79861416 | None:intergenic | 30.0% |
| AAATAAAGTTAGACCCTGAA+AGG | - | chr7_1:79861402-79861421 | Msa1042110:intron | 30.0% | |
| !! | AAGAGGTACCTAATTATCTT+TGG | - | chr7_1:79861585-79861604 | Msa1042110:intron | 30.0% |
| !!! | TTGGATTTTTTGTATAGGCT+AGG | - | chr7_1:79861604-79861623 | Msa1042110:intron | 30.0% |
| CCTCAAACTTGAAATGTAAT+AGG | + | chr7_1:79861937-79861956 | None:intergenic | 30.0% | |
| !! | CCTATTACATTTCAAGTTTG+AGG | - | chr7_1:79861934-79861953 | Msa1042110:CDS | 30.0% |
| !!! | ATGTGCTTTTTTCTATTTCG+GGG | - | chr7_1:79862324-79862343 | Msa1042110:intron | 30.0% |
| CTACATAAATCAACCATTGT+AGG | + | chr7_1:79862405-79862424 | None:intergenic | 30.0% | |
| TGTTGAATGCTACTATTTGT+TGG | + | chr7_1:79862568-79862587 | None:intergenic | 30.0% | |
| GGATAATAATTAGGCAATAC+AGG | + | chr7_1:79862703-79862722 | None:intergenic | 30.0% | |
| AGTTAGGTATTAATGGTTTG+AGG | - | chr7_1:79862801-79862820 | Msa1042110:CDS | 30.0% | |
| ATAGTTGTAGAAGAAGCTTA+AGG | + | chr7_1:79860704-79860723 | None:intergenic | 30.0% | |
| AAGAAAAGGGGAAATAACTT+GGG | + | chr7_1:79860871-79860890 | None:intergenic | 30.0% | |
| AAAGAAAAGGGGAAATAACT+TGG | + | chr7_1:79860872-79860891 | None:intergenic | 30.0% | |
| CATAAGTGAGTGTCTAATTA+AGG | + | chr7_1:79860975-79860994 | None:intergenic | 30.0% | |
| GAGAAATGGTATGAATATGA+TGG | - | chr7_1:79861170-79861189 | Msa1042110:intron | 30.0% | |
| ATATTGTCATTGGTGTATGT+TGG | - | chr7_1:79861218-79861237 | Msa1042110:intron | 30.0% | |
| TTGGTGTATGTTGGAAAATT+AGG | - | chr7_1:79861227-79861246 | Msa1042110:intron | 30.0% | |
| GTATGTTGGAAAATTAGGAA+TGG | - | chr7_1:79861232-79861251 | Msa1042110:intron | 30.0% | |
| ATGGATGAAATGAACATTGA+TGG | - | chr7_1:79861305-79861324 | Msa1042110:intron | 30.0% | |
| ! | AAGTAACCAGATTGATTCAT+TGG | - | chr7_1:79861361-79861380 | Msa1042110:intron | 30.0% |
| ! | GGTCTAACTTTATTTCTTCT+TGG | + | chr7_1:79861397-79861416 | None:intergenic | 30.0% |
| AAATAAAGTTAGACCCTGAA+AGG | - | chr7_1:79861402-79861421 | Msa1042110:intron | 30.0% | |
| !! | AAGAGGTACCTAATTATCTT+TGG | - | chr7_1:79861585-79861604 | Msa1042110:intron | 30.0% |
| !!! | TTGGATTTTTTGTATAGGCT+AGG | - | chr7_1:79861604-79861623 | Msa1042110:intron | 30.0% |
| CCTCAAACTTGAAATGTAAT+AGG | + | chr7_1:79861937-79861956 | None:intergenic | 30.0% | |
| !! | CCTATTACATTTCAAGTTTG+AGG | - | chr7_1:79861934-79861953 | Msa1042110:CDS | 30.0% |
| !!! | ATGTGCTTTTTTCTATTTCG+GGG | - | chr7_1:79862324-79862343 | Msa1042110:intron | 30.0% |
| CTACATAAATCAACCATTGT+AGG | + | chr7_1:79862405-79862424 | None:intergenic | 30.0% | |
| TGTTGAATGCTACTATTTGT+TGG | + | chr7_1:79862568-79862587 | None:intergenic | 30.0% | |
| GGATAATAATTAGGCAATAC+AGG | + | chr7_1:79862703-79862722 | None:intergenic | 30.0% | |
| AGTTAGGTATTAATGGTTTG+AGG | - | chr7_1:79862801-79862820 | Msa1042110:CDS | 30.0% | |
| ! | CTCTCATTCCAATCCATTTT+AGG | + | chr7_1:79860649-79860668 | None:intergenic | 35.0% |
| TATAACAACACCCCTTATTC+AGG | - | chr7_1:79860721-79860740 | Msa1042110:three_prime_UTR | 35.0% | |
| ! | CAATATTCTAGAGAGAGAGA+AGG | + | chr7_1:79860825-79860844 | None:intergenic | 35.0% |
| TAGGGTGTACAAAGAAATGA+AGG | - | chr7_1:79861145-79861164 | Msa1042110:intron | 35.0% | |
| AAGAAATGAAGGCAGAGAAA+TGG | - | chr7_1:79861156-79861175 | Msa1042110:intron | 35.0% | |
| ATGTTCATTTCATCCATAGC+TGG | + | chr7_1:79861302-79861321 | None:intergenic | 35.0% | |
| TCTTCTCCAATGAATCAATC+TGG | + | chr7_1:79861370-79861389 | None:intergenic | 35.0% | |
| AAAGCTTCATCTTCCTTTCA+GGG | + | chr7_1:79861418-79861437 | None:intergenic | 35.0% | |
| ! | TTTGGAACCAAACAGCAATT+TGG | + | chr7_1:79861466-79861485 | None:intergenic | 35.0% |
| !! | TTGCTGTTTGGTTCCAAAAT+AGG | - | chr7_1:79861468-79861487 | Msa1042110:intron | 35.0% |
| AGAATTTGATGTTGTCTCCA+AGG | - | chr7_1:79861544-79861563 | Msa1042110:intron | 35.0% | |
| !! | TTGGAGTTTCTGTTTTTCCT+TGG | + | chr7_1:79861564-79861583 | None:intergenic | 35.0% |
| AAAACAGAAACTCCAAGAAG+AGG | - | chr7_1:79861568-79861587 | Msa1042110:intron | 35.0% | |
| GATAATTAGGTACCTCTTCT+TGG | + | chr7_1:79861583-79861602 | None:intergenic | 35.0% | |
| ! | TAATGCAAGAGGTACATGAA+GGG | + | chr7_1:79861711-79861730 | None:intergenic | 35.0% |
| ! | ATAATGCAAGAGGTACATGA+AGG | + | chr7_1:79861712-79861731 | None:intergenic | 35.0% |
| AAATCAGACTTACGCCTATT+AGG | + | chr7_1:79861865-79861884 | None:intergenic | 35.0% | |
| ATAGGTCTCTAAGCTTCTAA+AGG | + | chr7_1:79861919-79861938 | None:intergenic | 35.0% | |
| AACCTAGTATTACCCTACAA+TGG | - | chr7_1:79862389-79862408 | Msa1042110:intron | 35.0% | |
| AACCATTGTAGGGTAATACT+AGG | + | chr7_1:79862394-79862413 | None:intergenic | 35.0% | |
| ACACAGGTTATGAAGTTGAA+GGG | - | chr7_1:79862445-79862464 | Msa1042110:intron | 35.0% | |
| ! | AGCAATCAGGTGGTAATTTT+AGG | - | chr7_1:79862479-79862498 | Msa1042110:intron | 35.0% |
| ! | TTGTTATTGTATCCCTGATC+TGG | + | chr7_1:79862598-79862617 | None:intergenic | 35.0% |
| ! | CTCTCATTCCAATCCATTTT+AGG | + | chr7_1:79860649-79860668 | None:intergenic | 35.0% |
| TATAACAACACCCCTTATTC+AGG | - | chr7_1:79860721-79860740 | Msa1042110:three_prime_UTR | 35.0% | |
| ! | CAATATTCTAGAGAGAGAGA+AGG | + | chr7_1:79860825-79860844 | None:intergenic | 35.0% |
| TAGGGTGTACAAAGAAATGA+AGG | - | chr7_1:79861145-79861164 | Msa1042110:intron | 35.0% | |
| AAGAAATGAAGGCAGAGAAA+TGG | - | chr7_1:79861156-79861175 | Msa1042110:intron | 35.0% | |
| ATGTTCATTTCATCCATAGC+TGG | + | chr7_1:79861302-79861321 | None:intergenic | 35.0% | |
| TCTTCTCCAATGAATCAATC+TGG | + | chr7_1:79861370-79861389 | None:intergenic | 35.0% | |
| AAAGCTTCATCTTCCTTTCA+GGG | + | chr7_1:79861418-79861437 | None:intergenic | 35.0% | |
| ! | TTTGGAACCAAACAGCAATT+TGG | + | chr7_1:79861466-79861485 | None:intergenic | 35.0% |
| !! | TTGCTGTTTGGTTCCAAAAT+AGG | - | chr7_1:79861468-79861487 | Msa1042110:intron | 35.0% |
| AGAATTTGATGTTGTCTCCA+AGG | - | chr7_1:79861544-79861563 | Msa1042110:intron | 35.0% | |
| !! | TTGGAGTTTCTGTTTTTCCT+TGG | + | chr7_1:79861564-79861583 | None:intergenic | 35.0% |
| AAAACAGAAACTCCAAGAAG+AGG | - | chr7_1:79861568-79861587 | Msa1042110:intron | 35.0% | |
| GATAATTAGGTACCTCTTCT+TGG | + | chr7_1:79861583-79861602 | None:intergenic | 35.0% | |
| ! | TAATGCAAGAGGTACATGAA+GGG | + | chr7_1:79861711-79861730 | None:intergenic | 35.0% |
| ! | ATAATGCAAGAGGTACATGA+AGG | + | chr7_1:79861712-79861731 | None:intergenic | 35.0% |
| AAATCAGACTTACGCCTATT+AGG | + | chr7_1:79861865-79861884 | None:intergenic | 35.0% | |
| ATAGGTCTCTAAGCTTCTAA+AGG | + | chr7_1:79861919-79861938 | None:intergenic | 35.0% | |
| AACCTAGTATTACCCTACAA+TGG | - | chr7_1:79862389-79862408 | Msa1042110:intron | 35.0% | |
| AACCATTGTAGGGTAATACT+AGG | + | chr7_1:79862394-79862413 | None:intergenic | 35.0% | |
| ACACAGGTTATGAAGTTGAA+GGG | - | chr7_1:79862445-79862464 | Msa1042110:intron | 35.0% | |
| ! | AGCAATCAGGTGGTAATTTT+AGG | - | chr7_1:79862479-79862498 | Msa1042110:intron | 35.0% |
| ! | TTGTTATTGTATCCCTGATC+TGG | + | chr7_1:79862598-79862617 | None:intergenic | 35.0% |
| GAAGAAGCTTAAGGAAGACT+CGG | + | chr7_1:79860695-79860714 | None:intergenic | 40.0% | |
| GAAATGAGTCAACCGTCATT+GGG | - | chr7_1:79861254-79861273 | Msa1042110:intron | 40.0% | |
| ACAAAGGTTACTTCCAGCTA+TGG | - | chr7_1:79861286-79861305 | Msa1042110:intron | 40.0% | |
| GAAAGCTTCATCTTCCTTTC+AGG | + | chr7_1:79861419-79861438 | None:intergenic | 40.0% | |
| ATGAAGCTTTCAAGAGAGCT+AGG | - | chr7_1:79861428-79861447 | Msa1042110:intron | 40.0% | |
| TGAAGCTTTCAAGAGAGCTA+GGG | - | chr7_1:79861429-79861448 | Msa1042110:intron | 40.0% | |
| CACACAGGTTATGAAGTTGA+AGG | - | chr7_1:79862444-79862463 | Msa1042110:intron | 40.0% | |
| GGAAAGCTAAAAGAGCAATC+AGG | - | chr7_1:79862466-79862485 | Msa1042110:intron | 40.0% | |
| AAGCTAAAAGAGCAATCAGG+TGG | - | chr7_1:79862469-79862488 | Msa1042110:intron | 40.0% | |
| ! | ACAGTAGAAAGCACATCAGA+AGG | - | chr7_1:79862523-79862542 | Msa1042110:intron | 40.0% |
| GAAGAAGCTTAAGGAAGACT+CGG | + | chr7_1:79860695-79860714 | None:intergenic | 40.0% | |
| GAAATGAGTCAACCGTCATT+GGG | - | chr7_1:79861254-79861273 | Msa1042110:intron | 40.0% | |
| ACAAAGGTTACTTCCAGCTA+TGG | - | chr7_1:79861286-79861305 | Msa1042110:intron | 40.0% | |
| GAAAGCTTCATCTTCCTTTC+AGG | + | chr7_1:79861419-79861438 | None:intergenic | 40.0% | |
| ATGAAGCTTTCAAGAGAGCT+AGG | - | chr7_1:79861428-79861447 | Msa1042110:intron | 40.0% | |
| TGAAGCTTTCAAGAGAGCTA+GGG | - | chr7_1:79861429-79861448 | Msa1042110:intron | 40.0% | |
| CACACAGGTTATGAAGTTGA+AGG | - | chr7_1:79862444-79862463 | Msa1042110:intron | 40.0% | |
| GGAAAGCTAAAAGAGCAATC+AGG | - | chr7_1:79862466-79862485 | Msa1042110:intron | 40.0% | |
| AAGCTAAAAGAGCAATCAGG+TGG | - | chr7_1:79862469-79862488 | Msa1042110:intron | 40.0% | |
| ! | ACAGTAGAAAGCACATCAGA+AGG | - | chr7_1:79862523-79862542 | Msa1042110:intron | 40.0% |
| ! | GACTCGGTATGAGGAACAAA+GGG | + | chr7_1:79860679-79860698 | None:intergenic | 45.0% |
| ! | AGACTCGGTATGAGGAACAA+AGG | + | chr7_1:79860680-79860699 | None:intergenic | 45.0% |
| ! | CTTAAGGAAGACTCGGTATG+AGG | + | chr7_1:79860688-79860707 | None:intergenic | 45.0% |
| GGAAATGAGTCAACCGTCAT+TGG | - | chr7_1:79861253-79861272 | Msa1042110:intron | 45.0% | |
| TGTTGTGTCTCACCCAATGA+CGG | + | chr7_1:79861269-79861288 | None:intergenic | 45.0% | |
| CATTGGGTGAGACACAACAA+AGG | - | chr7_1:79861270-79861289 | Msa1042110:intron | 45.0% | |
| AAACAGCAATTTGGCGAGGT+TGG | + | chr7_1:79861457-79861476 | None:intergenic | 45.0% | |
| ! | AACCTCGCCAAATTGCTGTT+TGG | - | chr7_1:79861456-79861475 | Msa1042110:intron | 45.0% |
| AACCAAACAGCAATTTGGCG+AGG | + | chr7_1:79861461-79861480 | None:intergenic | 45.0% | |
| GGTTCCAAAATAGGCGTACA+AGG | - | chr7_1:79861477-79861496 | Msa1042110:intron | 45.0% | |
| TCCAAAATAGGCGTACAAGG+TGG | - | chr7_1:79861480-79861499 | Msa1042110:intron | 45.0% | |
| ! | TCCACCTTGTACGCCTATTT+TGG | + | chr7_1:79861484-79861503 | None:intergenic | 45.0% |
| AAATAGGCGTACAAGGTGGA+AGG | - | chr7_1:79861484-79861503 | Msa1042110:intron | 45.0% | |
| ! | TCAATGTGCTCTGAACACAC+AGG | - | chr7_1:79862429-79862448 | Msa1042110:intron | 45.0% |
| TCAACAAGCTGTTCCAGATC+AGG | - | chr7_1:79862582-79862601 | Msa1042110:intron | 45.0% | |
| CAACAAGCTGTTCCAGATCA+GGG | - | chr7_1:79862583-79862602 | Msa1042110:intron | 45.0% | |
| TGCCTCCTAATCAATGTCAC+TGG | - | chr7_1:79862677-79862696 | Msa1042110:intron | 45.0% | |
| ! | ACAGGCCAGTGACATTGATT+AGG | + | chr7_1:79862685-79862704 | None:intergenic | 45.0% |
| ! | GACTCGGTATGAGGAACAAA+GGG | + | chr7_1:79860679-79860698 | None:intergenic | 45.0% |
| ! | AGACTCGGTATGAGGAACAA+AGG | + | chr7_1:79860680-79860699 | None:intergenic | 45.0% |
| ! | CTTAAGGAAGACTCGGTATG+AGG | + | chr7_1:79860688-79860707 | None:intergenic | 45.0% |
| GGAAATGAGTCAACCGTCAT+TGG | - | chr7_1:79861253-79861272 | Msa1042110:intron | 45.0% | |
| TGTTGTGTCTCACCCAATGA+CGG | + | chr7_1:79861269-79861288 | None:intergenic | 45.0% | |
| CATTGGGTGAGACACAACAA+AGG | - | chr7_1:79861270-79861289 | Msa1042110:intron | 45.0% | |
| AAACAGCAATTTGGCGAGGT+TGG | + | chr7_1:79861457-79861476 | None:intergenic | 45.0% | |
| ! | AACCTCGCCAAATTGCTGTT+TGG | - | chr7_1:79861456-79861475 | Msa1042110:intron | 45.0% |
| AACCAAACAGCAATTTGGCG+AGG | + | chr7_1:79861461-79861480 | None:intergenic | 45.0% | |
| GGTTCCAAAATAGGCGTACA+AGG | - | chr7_1:79861477-79861496 | Msa1042110:intron | 45.0% | |
| TCCAAAATAGGCGTACAAGG+TGG | - | chr7_1:79861480-79861499 | Msa1042110:intron | 45.0% | |
| ! | TCCACCTTGTACGCCTATTT+TGG | + | chr7_1:79861484-79861503 | None:intergenic | 45.0% |
| AAATAGGCGTACAAGGTGGA+AGG | - | chr7_1:79861484-79861503 | Msa1042110:intron | 45.0% | |
| ! | TCAATGTGCTCTGAACACAC+AGG | - | chr7_1:79862429-79862448 | Msa1042110:intron | 45.0% |
| TCAACAAGCTGTTCCAGATC+AGG | - | chr7_1:79862582-79862601 | Msa1042110:intron | 45.0% | |
| CAACAAGCTGTTCCAGATCA+GGG | - | chr7_1:79862583-79862602 | Msa1042110:intron | 45.0% | |
| TGCCTCCTAATCAATGTCAC+TGG | - | chr7_1:79862677-79862696 | Msa1042110:intron | 45.0% | |
| ! | ACAGGCCAGTGACATTGATT+AGG | + | chr7_1:79862685-79862704 | None:intergenic | 45.0% |
| !!! | TACAAATTTTTTTTTTTTTT+CGG | + | chr7_1:79861786-79861805 | None:intergenic | 5.0% |
| !!! | TATTTATTTTTTTACTTTTT+TGG | + | chr7_1:79861993-79862012 | None:intergenic | 5.0% |
| !!! | TACAAATTTTTTTTTTTTTT+CGG | + | chr7_1:79861786-79861805 | None:intergenic | 5.0% |
| !!! | TATTTATTTTTTTACTTTTT+TGG | + | chr7_1:79861993-79862012 | None:intergenic | 5.0% |
| ! | GGCCAGTGACATTGATTAGG+AGG | + | chr7_1:79862682-79862701 | None:intergenic | 50.0% |
| ! | GGCCAGTGACATTGATTAGG+AGG | + | chr7_1:79862682-79862701 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79860640 | 79862848 | 79860640 | ID=Msa1042110;Name=Msa1042110 |
| chr7_1 | mRNA | 79860640 | 79862848 | 79860640 | ID=Msa1042110-mRNA-1;Parent=Msa1042110;Name=Msa1042110-mRNA-1;_AED=0.03;_eAED=0.03;_QI=12|1|1|1|0.5|0.33|3|122|235 |
| chr7_1 | exon | 79860640 | 79861037 | 79860640 | ID=Msa1042110-mRNA-1:exon:21658;Parent=Msa1042110-mRNA-1 |
| chr7_1 | exon | 79861899 | 79862239 | 79861899 | ID=Msa1042110-mRNA-1:exon:21657;Parent=Msa1042110-mRNA-1 |
| chr7_1 | exon | 79862746 | 79862848 | 79862746 | ID=Msa1042110-mRNA-1:exon:21656;Parent=Msa1042110-mRNA-1 |
| chr7_1 | five_prime_UTR | 79862837 | 79862848 | 79862837 | ID=Msa1042110-mRNA-1:five_prime_utr;Parent=Msa1042110-mRNA-1 |
| chr7_1 | CDS | 79862746 | 79862836 | 79862746 | ID=Msa1042110-mRNA-1:cds;Parent=Msa1042110-mRNA-1 |
| chr7_1 | CDS | 79861899 | 79862239 | 79861899 | ID=Msa1042110-mRNA-1:cds;Parent=Msa1042110-mRNA-1 |
| chr7_1 | CDS | 79860762 | 79861037 | 79860762 | ID=Msa1042110-mRNA-1:cds;Parent=Msa1042110-mRNA-1 |
| chr7_1 | three_prime_UTR | 79860640 | 79860761 | 79860640 | ID=Msa1042110-mRNA-1:three_prime_utr;Parent=Msa1042110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
