Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079930 | XP_013450066.1 | 98.291 | 234 | 2 | 1 | 1 | 234 | 1 | 232 | 9.13e-169 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079930 | sp|Q9LZR0|ATB51_ARATH | 52.299 | 174 | 64 | 4 | 16 | 174 | 25 | 194 | 1.31e-45 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079930 | A0A072U315 | 98.291 | 234 | 2 | 1 | 1 | 234 | 1 | 232 | 4.36e-169 | 474 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1079930 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0691160 | Msa1079930 | 0.812058 | 5.130260e-51 | -8.615850e-47 |
| Msa0423100 | Msa1079930 | 0.815377 | 9.535911e-52 | -8.615850e-47 |
| Msa0469260 | Msa1079930 | 0.800357 | 1.497323e-48 | -8.615850e-47 |
| Msa1042110 | Msa1079930 | 0.824074 | 9.830252e-54 | -8.615850e-47 |
| Msa1079930 | Msa1113850 | 0.801989 | 6.940351e-49 | -8.615850e-47 |
| Msa1079930 | Msa1124860 | 0.855067 | 8.086577e-62 | -8.615850e-47 |
| Msa1079930 | Msa1167530 | 0.913569 | 5.288583e-84 | -8.615850e-47 |
| Msa1079930 | Msa1271260 | 0.809388 | 1.939903e-50 | -8.615850e-47 |
| Msa1079930 | Msa1435480 | 0.807299 | 5.410750e-50 | -8.615850e-47 |
| Msa1079930 | Msa1458910 | 0.806040 | 9.978358e-50 | -8.615850e-47 |
| Msa0288190 | Msa1079930 | 0.805192 | 1.503425e-49 | -8.615850e-47 |
| Msa0288200 | Msa1079930 | 0.801935 | 7.120485e-49 | -8.615850e-47 |
| Msa0326540 | Msa1079930 | 0.807920 | 3.992334e-50 | -8.615850e-47 |
| Msa0885060 | Msa1079930 | 0.803601 | 3.224682e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079930 | MtrunA17_Chr7g0265521 | 98.291 | 234 | 2 | 1 | 1 | 234 | 1 | 232 | 8.40e-173 | 474 |
| Msa1079930 | MtrunA17_Chr1g0179581 | 73.000 | 100 | 25 | 1 | 46 | 145 | 13 | 110 | 6.52e-46 | 148 |
| Msa1079930 | MtrunA17_Chr8g0362151 | 45.652 | 138 | 59 | 2 | 21 | 151 | 44 | 172 | 7.49e-33 | 120 |
| Msa1079930 | MtrunA17_Chr6g0450991 | 58.824 | 102 | 35 | 1 | 62 | 156 | 66 | 167 | 6.34e-32 | 118 |
| Msa1079930 | MtrunA17_Chr5g0416391 | 50.926 | 108 | 46 | 1 | 51 | 151 | 65 | 172 | 2.88e-30 | 113 |
| Msa1079930 | MtrunA17_Chr4g0060031 | 48.889 | 135 | 49 | 4 | 62 | 176 | 94 | 228 | 5.51e-30 | 114 |
| Msa1079930 | MtrunA17_Chr3g0119291 | 47.761 | 134 | 68 | 2 | 56 | 187 | 52 | 185 | 1.23e-29 | 111 |
| Msa1079930 | MtrunA17_Chr3g0123691 | 46.774 | 124 | 57 | 2 | 41 | 155 | 36 | 159 | 1.07e-28 | 109 |
| Msa1079930 | MtrunA17_Chr7g0217111 | 48.462 | 130 | 63 | 2 | 51 | 176 | 67 | 196 | 1.20e-28 | 108 |
| Msa1079930 | MtrunA17_Chr6g0453021 | 55.435 | 92 | 41 | 0 | 62 | 153 | 95 | 186 | 3.35e-28 | 108 |
| Msa1079930 | MtrunA17_Chr8g0381741 | 52.475 | 101 | 41 | 1 | 62 | 155 | 53 | 153 | 1.21e-27 | 107 |
| Msa1079930 | MtrunA17_Chr5g0415941 | 55.670 | 97 | 36 | 1 | 63 | 152 | 87 | 183 | 7.04e-27 | 105 |
| Msa1079930 | MtrunA17_Chr8g0362751 | 52.577 | 97 | 39 | 1 | 63 | 152 | 89 | 185 | 6.76e-25 | 99.4 |
| Msa1079930 | MtrunA17_Chr3g0127511 | 35.519 | 183 | 92 | 5 | 65 | 228 | 40 | 215 | 2.13e-24 | 97.4 |
| Msa1079930 | MtrunA17_Chr8g0346251 | 42.857 | 119 | 56 | 3 | 67 | 175 | 45 | 161 | 4.08e-21 | 88.6 |
| Msa1079930 | MtrunA17_Chr4g0054421 | 47.368 | 95 | 50 | 0 | 56 | 150 | 120 | 214 | 1.55e-20 | 87.4 |
| Msa1079930 | MtrunA17_Chr5g0403701 | 47.826 | 92 | 48 | 0 | 63 | 154 | 53 | 144 | 1.11e-19 | 84.0 |
| Msa1079930 | MtrunA17_Chr4g0055851 | 44.211 | 95 | 52 | 1 | 56 | 150 | 114 | 207 | 2.38e-18 | 81.6 |
| Msa1079930 | MtrunA17_Chr1g0175651 | 42.105 | 95 | 55 | 0 | 56 | 150 | 147 | 241 | 8.91e-18 | 80.5 |
| Msa1079930 | MtrunA17_Chr5g0403691 | 47.475 | 99 | 45 | 2 | 63 | 154 | 53 | 151 | 1.60e-17 | 78.2 |
| Msa1079930 | MtrunA17_Chr1g0151971 | 42.308 | 104 | 60 | 0 | 47 | 150 | 114 | 217 | 1.89e-17 | 79.3 |
| Msa1079930 | MtrunA17_Chr7g0258831 | 41.935 | 93 | 54 | 0 | 58 | 150 | 155 | 247 | 4.34e-17 | 78.6 |
| Msa1079930 | MtrunA17_Chr5g0399491 | 45.455 | 88 | 48 | 0 | 63 | 150 | 136 | 223 | 1.02e-16 | 77.4 |
| Msa1079930 | MtrunA17_Chr5g0400781 | 44.681 | 94 | 51 | 1 | 56 | 149 | 117 | 209 | 1.92e-16 | 76.3 |
| Msa1079930 | MtrunA17_Chr2g0308611 | 40.000 | 100 | 60 | 0 | 51 | 150 | 188 | 287 | 2.76e-16 | 76.6 |
| Msa1079930 | MtrunA17_Chr8g0335131 | 43.182 | 88 | 50 | 0 | 63 | 150 | 146 | 233 | 1.27e-15 | 74.3 |
| Msa1079930 | MtrunA17_Chr4g0044091 | 42.268 | 97 | 55 | 1 | 54 | 150 | 57 | 152 | 1.51e-15 | 72.4 |
| Msa1079930 | MtrunA17_Chr4g0071411 | 44.048 | 84 | 47 | 0 | 66 | 149 | 91 | 174 | 2.34e-14 | 69.7 |
| Msa1079930 | MtrunA17_Chr6g0481041 | 41.000 | 100 | 54 | 2 | 61 | 158 | 28 | 124 | 6.87e-12 | 64.7 |
| Msa1079930 | MtrunA17_Chr5g0410711 | 36.937 | 111 | 64 | 2 | 51 | 158 | 77 | 184 | 8.02e-12 | 64.3 |
| Msa1079930 | MtrunA17_Chr2g0299031 | 32.667 | 150 | 91 | 4 | 4 | 150 | 27 | 169 | 1.05e-11 | 62.4 |
| Msa1079930 | MtrunA17_Chr2g0331581 | 41.463 | 82 | 48 | 0 | 66 | 147 | 145 | 226 | 1.53e-11 | 63.5 |
| Msa1079930 | MtrunA17_Chr3g0135331 | 39.535 | 86 | 51 | 1 | 50 | 135 | 133 | 217 | 1.79e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079930 | AT5G03790.1 | 52.299 | 174 | 64 | 4 | 16 | 174 | 25 | 194 | 1.33e-46 | 155 |
| Msa1079930 | AT5G03790.2 | 57.447 | 141 | 49 | 2 | 16 | 148 | 25 | 162 | 2.03e-43 | 145 |
| Msa1079930 | AT2G36610.1 | 47.879 | 165 | 68 | 3 | 10 | 156 | 8 | 172 | 1.65e-39 | 135 |
| Msa1079930 | AT1G69780.1 | 48.201 | 139 | 53 | 3 | 56 | 187 | 78 | 204 | 6.93e-32 | 118 |
| Msa1079930 | AT5G65310.1 | 55.914 | 93 | 41 | 0 | 62 | 154 | 71 | 163 | 8.62e-29 | 110 |
| Msa1079930 | AT5G65310.2 | 55.914 | 93 | 41 | 0 | 62 | 154 | 53 | 145 | 9.56e-29 | 110 |
| Msa1079930 | AT2G22430.1 | 57.143 | 98 | 35 | 1 | 62 | 152 | 61 | 158 | 1.25e-28 | 110 |
| Msa1079930 | AT5G15150.1 | 53.846 | 104 | 46 | 1 | 51 | 152 | 101 | 204 | 1.50e-28 | 110 |
| Msa1079930 | AT4G40060.1 | 45.588 | 136 | 58 | 3 | 33 | 152 | 20 | 155 | 5.21e-28 | 108 |
| Msa1079930 | AT3G01470.1 | 54.545 | 99 | 38 | 1 | 62 | 153 | 67 | 165 | 8.90e-28 | 107 |
| Msa1079930 | AT3G01220.1 | 48.000 | 125 | 54 | 3 | 38 | 151 | 58 | 182 | 2.03e-26 | 103 |
| Msa1079930 | AT1G26960.1 | 50.000 | 108 | 47 | 1 | 51 | 151 | 59 | 166 | 2.43e-26 | 102 |
| Msa1079930 | AT4G36740.1 | 52.577 | 97 | 46 | 0 | 56 | 152 | 48 | 144 | 5.54e-25 | 98.6 |
| Msa1079930 | AT4G36740.2 | 52.577 | 97 | 46 | 0 | 56 | 152 | 49 | 145 | 6.36e-25 | 98.2 |
| Msa1079930 | AT2G46680.1 | 46.364 | 110 | 48 | 2 | 47 | 149 | 20 | 125 | 1.05e-24 | 98.6 |
| Msa1079930 | AT2G46680.2 | 46.296 | 108 | 47 | 2 | 47 | 147 | 20 | 123 | 9.62e-24 | 96.3 |
| Msa1079930 | AT2G18550.1 | 42.857 | 126 | 63 | 1 | 63 | 188 | 61 | 177 | 2.75e-23 | 94.0 |
| Msa1079930 | AT1G27045.1 | 45.669 | 127 | 57 | 4 | 48 | 164 | 50 | 174 | 9.56e-23 | 92.8 |
| Msa1079930 | AT1G27045.5 | 45.669 | 127 | 57 | 4 | 48 | 164 | 7 | 131 | 1.42e-22 | 91.3 |
| Msa1079930 | AT1G27045.3 | 45.669 | 127 | 57 | 4 | 48 | 164 | 7 | 131 | 1.42e-22 | 91.3 |
| Msa1079930 | AT3G61890.1 | 47.778 | 90 | 40 | 1 | 66 | 148 | 33 | 122 | 1.76e-22 | 92.4 |
| Msa1079930 | AT1G27045.2 | 46.400 | 125 | 55 | 4 | 50 | 164 | 1 | 123 | 2.09e-22 | 90.5 |
| Msa1079930 | AT5G66700.1 | 48.913 | 92 | 47 | 0 | 63 | 154 | 71 | 162 | 6.31e-21 | 88.2 |
| Msa1079930 | AT1G27045.4 | 39.007 | 141 | 66 | 4 | 48 | 178 | 50 | 180 | 5.33e-20 | 85.9 |
| Msa1079930 | AT5G53980.1 | 44.086 | 93 | 52 | 0 | 61 | 153 | 9 | 101 | 2.82e-18 | 79.3 |
| Msa1079930 | AT5G06710.1 | 43.564 | 101 | 57 | 0 | 49 | 149 | 176 | 276 | 5.12e-18 | 82.0 |
| Msa1079930 | AT5G47370.1 | 41.489 | 94 | 55 | 0 | 56 | 149 | 123 | 216 | 1.14e-16 | 77.4 |
| Msa1079930 | AT4G16780.1 | 42.105 | 95 | 54 | 1 | 56 | 150 | 123 | 216 | 1.25e-16 | 77.4 |
| Msa1079930 | AT2G22800.1 | 45.977 | 87 | 47 | 0 | 63 | 149 | 113 | 199 | 2.06e-16 | 76.6 |
| Msa1079930 | AT3G60390.1 | 41.053 | 95 | 56 | 0 | 56 | 150 | 155 | 249 | 5.72e-16 | 75.9 |
| Msa1079930 | AT2G44910.1 | 43.182 | 88 | 50 | 0 | 63 | 150 | 163 | 250 | 1.05e-15 | 75.1 |
| Msa1079930 | AT2G01430.1 | 44.211 | 95 | 53 | 0 | 56 | 150 | 132 | 226 | 1.97e-15 | 73.9 |
| Msa1079930 | AT4G37790.1 | 44.318 | 88 | 49 | 0 | 63 | 150 | 126 | 213 | 3.07e-15 | 73.6 |
| Msa1079930 | AT4G17460.1 | 39.000 | 100 | 61 | 0 | 51 | 150 | 123 | 222 | 3.64e-15 | 73.2 |
| Msa1079930 | AT1G79840.2 | 38.462 | 104 | 62 | 1 | 57 | 158 | 125 | 228 | 6.29e-14 | 71.2 |
| Msa1079930 | AT1G79840.1 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 6.41e-14 | 70.9 |
| Msa1079930 | AT1G79840.3 | 38.462 | 104 | 62 | 1 | 57 | 158 | 38 | 141 | 6.95e-14 | 70.9 |
| Msa1079930 | AT1G79840.6 | 38.462 | 104 | 62 | 1 | 57 | 158 | 38 | 141 | 6.95e-14 | 70.9 |
| Msa1079930 | AT1G79840.5 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 7.03e-14 | 70.9 |
| Msa1079930 | AT1G79840.4 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 1.07e-13 | 70.5 |
| Msa1079930 | AT1G73360.1 | 43.000 | 100 | 52 | 2 | 61 | 158 | 31 | 127 | 9.08e-13 | 67.8 |
| Msa1079930 | AT1G70920.2 | 35.659 | 129 | 77 | 2 | 22 | 150 | 4 | 126 | 1.60e-12 | 64.3 |
| Msa1079930 | AT1G70920.1 | 35.659 | 129 | 77 | 2 | 22 | 150 | 34 | 156 | 1.90e-12 | 64.7 |
| Msa1079930 | AT5G06710.4 | 48.485 | 66 | 34 | 0 | 49 | 114 | 176 | 241 | 4.61e-12 | 64.3 |
| Msa1079930 | AT5G46880.3 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.49e-11 | 62.8 |
| Msa1079930 | AT5G46880.1 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.49e-11 | 62.8 |
| Msa1079930 | AT5G46880.2 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.49e-11 | 62.8 |
| Msa1079930 | AT3G61150.1 | 33.333 | 120 | 71 | 2 | 51 | 168 | 99 | 211 | 7.06e-11 | 62.0 |
Find 53 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTCATCTTCCTTTC+AGG | 0.091903 | 7_2:+79201397 | None:intergenic |
| TCCACCTTGTACGCCTATTT+TGG | 0.171135 | 7_2:+79201332 | None:intergenic |
| TTGCTGTTTGGTTCCAAAAT+AGG | 0.192526 | 7_2:-79201345 | Msa1079930:CDS |
| GATAATTAGGTACCTCTTCT+TGG | 0.238895 | 7_2:+79201233 | None:intergenic |
| TACTAGTAGTTAGGTATTAA+TGG | 0.239424 | 7_2:-79199999 | Msa1079930:three_prime_UTR |
| GGTCTAACTTTATTTCTTCT+TGG | 0.251946 | 7_2:+79201419 | None:intergenic |
| TTTGGAACCAAACAGCAATT+TGG | 0.278055 | 7_2:+79201350 | None:intergenic |
| TTGACTTATAATGTAGATTA+GGG | 0.282962 | 7_2:+79200072 | None:intergenic |
| TTTGACTTATAATGTAGATT+AGG | 0.293903 | 7_2:+79200071 | None:intergenic |
| GTAGATTAGGGATAATAATT+AGG | 0.330622 | 7_2:+79200084 | None:intergenic |
| TTGTTATTGTATCCCTGATC+TGG | 0.353848 | 7_2:+79200195 | None:intergenic |
| TATAACAACACCCCTTATTC+AGG | 0.354916 | 7_2:-79202191 | Msa1079930:intron |
| AAAGCTTCATCTTCCTTTCA+GGG | 0.372499 | 7_2:+79201398 | None:intergenic |
| AACCTCGCCAAATTGCTGTT+TGG | 0.376064 | 7_2:-79201357 | Msa1079930:CDS |
| TGTTGAATGCTACTATTTGT+TGG | 0.395823 | 7_2:+79200225 | None:intergenic |
| GGAAATGAGTCAACCGTCAT+TGG | 0.398063 | 7_2:-79201560 | Msa1079930:CDS |
| TCAACAAGCTGTTCCAGATC+AGG | 0.398083 | 7_2:-79200208 | Msa1079930:CDS |
| GGATAATAATTAGGCAATAC+AGG | 0.433929 | 7_2:+79200093 | None:intergenic |
| ATGAAGCTTTCAAGAGAGCT+AGG | 0.447660 | 7_2:-79201385 | Msa1079930:CDS |
| ATAGTTGTAGAAGAAGCTTA+AGG | 0.450197 | 7_2:+79202211 | None:intergenic |
| ATGGATGAAATGAACATTGA+TGG | 0.450308 | 7_2:-79201508 | Msa1079930:CDS |
| ACAGGCCAGTGACATTGATT+AGG | 0.461524 | 7_2:+79200111 | None:intergenic |
| AGTTAGGTATTAATGGTTTG+AGG | 0.469550 | 7_2:-79199992 | Msa1079930:three_prime_UTR |
| AAGTAACCAGATTGATTCAC+TGG | 0.476965 | 7_2:-79201452 | Msa1079930:CDS |
| TCTTCTCCAGTGAATCAATC+TGG | 0.478388 | 7_2:+79201446 | None:intergenic |
| AAACAGCAATTTGGCGAGGT+TGG | 0.478872 | 7_2:+79201359 | None:intergenic |
| GGTTCCAAAATAGGCGTACA+AGG | 0.492609 | 7_2:-79201336 | Msa1079930:CDS |
| ATGTTCATTTCATCCATAGC+TGG | 0.495881 | 7_2:+79201514 | None:intergenic |
| AGTGAAAGCCTAAAATGGAT+TGG | 0.500919 | 7_2:-79202274 | Msa1079930:exon |
| CTTAAGGAAGACTCGGTATG+AGG | 0.509787 | 7_2:+79202227 | None:intergenic |
| GAAATGAGTCAACCGTCATT+GGG | 0.510295 | 7_2:-79201559 | Msa1079930:CDS |
| AGAATTTGATGTTGTCTCCA+AGG | 0.530430 | 7_2:-79201269 | Msa1079930:CDS |
| ATATCCCATATAGTTCTGAA+TGG | 0.532778 | 7_2:+79199955 | None:intergenic |
| GACTCGGTATGAGGAACAAA+GGG | 0.536486 | 7_2:+79202236 | None:intergenic |
| ACAAAGGTTACTTCCAGCTA+TGG | 0.541285 | 7_2:-79201527 | Msa1079930:CDS |
| CACACAGGTTATGAAGTTGA+AGG | 0.545029 | 7_2:-79200346 | Msa1079930:intron |
| GGAAAGCTAAAAGAGCAATC+AGG | 0.547065 | 7_2:-79200324 | Msa1079930:CDS |
| CAACAAGCTGTTCCAGATCA+GGG | 0.555767 | 7_2:-79200207 | Msa1079930:CDS |
| TGCCTCCTAATCAATGTCAC+TGG | 0.563013 | 7_2:-79200116 | Msa1079930:CDS |
| AAATAAAGTTAGACCCTGAA+AGG | 0.563460 | 7_2:-79201411 | Msa1079930:CDS |
| GGCCAGTGACATTGATTAGG+AGG | 0.565142 | 7_2:+79200114 | None:intergenic |
| ACAGTAGAAAGCACATCAGA+AGG | 0.569739 | 7_2:-79200267 | Msa1079930:CDS |
| TGAAGCTTTCAAGAGAGCTA+GGG | 0.584376 | 7_2:-79201384 | Msa1079930:CDS |
| ACACAGGTTATGAAGTTGAA+GGG | 0.593093 | 7_2:-79200345 | Msa1079930:intron |
| AGACTCGGTATGAGGAACAA+AGG | 0.604496 | 7_2:+79202235 | None:intergenic |
| TGTTGTGTCTCACCCAATGA+CGG | 0.608704 | 7_2:+79201547 | None:intergenic |
| AAATAGGCGTACAAGGTGGA+AGG | 0.609407 | 7_2:-79201329 | Msa1079930:CDS |
| AAAACAGAAACTCCAAGAAG+AGG | 0.620624 | 7_2:-79201245 | Msa1079930:intron |
| GAAGAAGCTTAAGGAAGACT+CGG | 0.638190 | 7_2:+79202220 | None:intergenic |
| AACCAAACAGCAATTTGGCG+AGG | 0.655043 | 7_2:+79201355 | None:intergenic |
| TCCAAAATAGGCGTACAAGG+TGG | 0.664815 | 7_2:-79201333 | Msa1079930:CDS |
| AAGCTAAAAGAGCAATCAGG+TGG | 0.690901 | 7_2:-79200321 | Msa1079930:CDS |
| CATTGGGTGAGACACAACAA+AGG | 0.711095 | 7_2:-79201543 | Msa1079930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAGAAAAAAAAGA+GGG | + | chr7_2:79200216-79200235 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAGAAAAAAAAG+AGG | + | chr7_2:79200217-79200236 | None:intergenic | 10.0% |
| !! | CTGTATAAAAAAATTAATTA+TGG | - | chr7_2:79201801-79201820 | Msa1079930:intron | 10.0% |
| !! | AAAAAAAAAGAAAAAAAAGA+GGG | + | chr7_2:79200216-79200235 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAGAAAAAAAAG+AGG | + | chr7_2:79200217-79200236 | None:intergenic | 10.0% |
| !! | CTGTATAAAAAAATTAATTA+TGG | - | chr7_2:79201801-79201820 | Msa1079930:intron | 10.0% |
| !! | AAAAATAGCTAAAAAAACAT+TGG | + | chr7_2:79200101-79200120 | None:intergenic | 15.0% |
| !! | AAAAAAAAGAAAAAAAAGAG+GGG | + | chr7_2:79200215-79200234 | None:intergenic | 15.0% |
| !! | AGAAAAAAAAATTGTATGAT+AGG | - | chr7_2:79200452-79200471 | Msa1079930:intron | 15.0% |
| !! | GAAAAAAAAATTGTATGATA+GGG | - | chr7_2:79200453-79200472 | Msa1079930:intron | 15.0% |
| !! | TTATTCAAATTTATTGTCAT+TGG | - | chr7_2:79200634-79200653 | Msa1079930:intron | 15.0% |
| !!! | ATAATTCAACTTCTTTTTAT+AGG | + | chr7_2:79201173-79201192 | None:intergenic | 15.0% |
| !!! | GAAAAATAGTAATTTTTGTA+AGG | + | chr7_2:79201675-79201694 | None:intergenic | 15.0% |
| !! | AAAAAAATTAATTATGGACA+TGG | - | chr7_2:79201807-79201826 | Msa1079930:intron | 15.0% |
| !! | AAAAATAGCTAAAAAAACAT+TGG | + | chr7_2:79200101-79200120 | None:intergenic | 15.0% |
| !! | AAAAAAAAGAAAAAAAAGAG+GGG | + | chr7_2:79200215-79200234 | None:intergenic | 15.0% |
| !! | AGAAAAAAAAATTGTATGAT+AGG | - | chr7_2:79200452-79200471 | Msa1079930:intron | 15.0% |
| !! | GAAAAAAAAATTGTATGATA+GGG | - | chr7_2:79200453-79200472 | Msa1079930:intron | 15.0% |
| !! | TTATTCAAATTTATTGTCAT+TGG | - | chr7_2:79200634-79200653 | Msa1079930:intron | 15.0% |
| !!! | ATAATTCAACTTCTTTTTAT+AGG | + | chr7_2:79201173-79201192 | None:intergenic | 15.0% |
| !!! | GAAAAATAGTAATTTTTGTA+AGG | + | chr7_2:79201675-79201694 | None:intergenic | 15.0% |
| !! | AAAAAAATTAATTATGGACA+TGG | - | chr7_2:79201807-79201826 | Msa1079930:intron | 15.0% |
| !!! | TGTTTTTTTTACCTGAATAA+GGG | + | chr7_2:79200062-79200081 | None:intergenic | 20.0% |
| !!! | ATTTGAAAACTACTCAATTT+TGG | - | chr7_2:79200271-79200290 | Msa1079930:CDS | 20.0% |
| !! | CAAAAAATCCAAAGATAATT+AGG | + | chr7_2:79201022-79201041 | None:intergenic | 20.0% |
| !!! | TATCTTTGGATTTTTTGTAT+AGG | - | chr7_2:79201025-79201044 | Msa1079930:intron | 20.0% |
| !!! | AATTCAACTTTTTTCCTAAT+AGG | - | chr7_2:79201279-79201298 | Msa1079930:CDS | 20.0% |
| !! | AATAATACAACTCTAACAAA+TGG | + | chr7_2:79201490-79201509 | None:intergenic | 20.0% |
| !! | TATAATGTAGAATATGTGTA+AGG | + | chr7_2:79201711-79201730 | None:intergenic | 20.0% |
| !!! | TTATGTGCTTTTTTCTATTT+CGG | - | chr7_2:79201771-79201790 | Msa1079930:intron | 20.0% |
| !! | TTGACTTATAATGTAGATTA+GGG | + | chr7_2:79202170-79202189 | None:intergenic | 20.0% |
| !!! | TTTGACTTATAATGTAGATT+AGG | + | chr7_2:79202171-79202190 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTACCTGAATAA+GGG | + | chr7_2:79200062-79200081 | None:intergenic | 20.0% |
| !!! | ATTTGAAAACTACTCAATTT+TGG | - | chr7_2:79200271-79200290 | Msa1079930:CDS | 20.0% |
| !! | CAAAAAATCCAAAGATAATT+AGG | + | chr7_2:79201022-79201041 | None:intergenic | 20.0% |
| !!! | TATCTTTGGATTTTTTGTAT+AGG | - | chr7_2:79201025-79201044 | Msa1079930:intron | 20.0% |
| !!! | AATTCAACTTTTTTCCTAAT+AGG | - | chr7_2:79201279-79201298 | Msa1079930:CDS | 20.0% |
| !! | AATAATACAACTCTAACAAA+TGG | + | chr7_2:79201490-79201509 | None:intergenic | 20.0% |
| !! | TATAATGTAGAATATGTGTA+AGG | + | chr7_2:79201711-79201730 | None:intergenic | 20.0% |
| !!! | TTATGTGCTTTTTTCTATTT+CGG | - | chr7_2:79201771-79201790 | Msa1079930:intron | 20.0% |
| !! | TTGACTTATAATGTAGATTA+GGG | + | chr7_2:79202170-79202189 | None:intergenic | 20.0% |
| !!! | TTTGACTTATAATGTAGATT+AGG | + | chr7_2:79202171-79202190 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTACCTGAATAAG+GGG | + | chr7_2:79200061-79200080 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTTACCTGAATA+AGG | + | chr7_2:79200063-79200082 | None:intergenic | 25.0% |
| ! | AAAAACATTGGAGTATAAAG+AGG | + | chr7_2:79200089-79200108 | None:intergenic | 25.0% |
| !! | TGCTTTTCAATTCATATAGA+AGG | - | chr7_2:79200236-79200255 | Msa1079930:CDS | 25.0% |
| ! | AACAATTTATGAGATGCATA+TGG | - | chr7_2:79200389-79200408 | Msa1079930:intron | 25.0% |
| ! | TAAAAATCACATAATGCAAG+AGG | + | chr7_2:79201148-79201167 | None:intergenic | 25.0% |
| !!! | TATGTGCTTTTTTCTATTTC+GGG | - | chr7_2:79201772-79201791 | Msa1079930:intron | 25.0% |
| ! | TACATAAATCAACCATTGTA+GGG | + | chr7_2:79201853-79201872 | None:intergenic | 25.0% |
| ! | GTAGATTAGGGATAATAATT+AGG | + | chr7_2:79202158-79202177 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGTACTAGTAGTT+AGG | - | chr7_2:79202231-79202250 | Msa1079930:CDS | 25.0% |
| ! | TACTAGTAGTTAGGTATTAA+TGG | - | chr7_2:79202240-79202259 | Msa1079930:CDS | 25.0% |
| !!! | GTTTTTTTTACCTGAATAAG+GGG | + | chr7_2:79200061-79200080 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTTACCTGAATA+AGG | + | chr7_2:79200063-79200082 | None:intergenic | 25.0% |
| ! | AAAAACATTGGAGTATAAAG+AGG | + | chr7_2:79200089-79200108 | None:intergenic | 25.0% |
| !! | TGCTTTTCAATTCATATAGA+AGG | - | chr7_2:79200236-79200255 | Msa1079930:CDS | 25.0% |
| ! | AACAATTTATGAGATGCATA+TGG | - | chr7_2:79200389-79200408 | Msa1079930:intron | 25.0% |
| ! | TAAAAATCACATAATGCAAG+AGG | + | chr7_2:79201148-79201167 | None:intergenic | 25.0% |
| !!! | TATGTGCTTTTTTCTATTTC+GGG | - | chr7_2:79201772-79201791 | Msa1079930:intron | 25.0% |
| ! | TACATAAATCAACCATTGTA+GGG | + | chr7_2:79201853-79201872 | None:intergenic | 25.0% |
| ! | GTAGATTAGGGATAATAATT+AGG | + | chr7_2:79202158-79202177 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGTACTAGTAGTT+AGG | - | chr7_2:79202231-79202250 | Msa1079930:CDS | 25.0% |
| ! | TACTAGTAGTTAGGTATTAA+TGG | - | chr7_2:79202240-79202259 | Msa1079930:CDS | 25.0% |
| ATAGTTGTAGAAGAAGCTTA+AGG | + | chr7_2:79200031-79200050 | None:intergenic | 30.0% | |
| AAAAAGAGGGGAAATAACTT+GGG | + | chr7_2:79200203-79200222 | None:intergenic | 30.0% | |
| AAAAAAGAGGGGAAATAACT+TGG | + | chr7_2:79200204-79200223 | None:intergenic | 30.0% | |
| CATAAGTGAGTGTCTAATTA+AGG | + | chr7_2:79200300-79200319 | None:intergenic | 30.0% | |
| GAGAAATGGTATGAATATGA+TGG | - | chr7_2:79200496-79200515 | Msa1079930:intron | 30.0% | |
| ATGGATGAAATGAACATTGA+TGG | - | chr7_2:79200731-79200750 | Msa1079930:intron | 30.0% | |
| ! | GGTCTAACTTTATTTCTTCT+TGG | + | chr7_2:79200823-79200842 | None:intergenic | 30.0% |
| AAATAAAGTTAGACCCTGAA+AGG | - | chr7_2:79200828-79200847 | Msa1079930:intron | 30.0% | |
| !! | AAGAGGTACCTAATTATCTT+TGG | - | chr7_2:79201011-79201030 | Msa1079930:intron | 30.0% |
| !!! | TTGGATTTTTTGTATAGGCT+AGG | - | chr7_2:79201030-79201049 | Msa1079930:intron | 30.0% |
| CCTCAAACTTGAAATGTAAT+AGG | + | chr7_2:79201368-79201387 | None:intergenic | 30.0% | |
| !! | CCTATTACATTTCAAGTTTG+AGG | - | chr7_2:79201365-79201384 | Msa1079930:CDS | 30.0% |
| !!! | ATGTGCTTTTTTCTATTTCG+GGG | - | chr7_2:79201773-79201792 | Msa1079930:intron | 30.0% |
| CTACATAAATCAACCATTGT+AGG | + | chr7_2:79201854-79201873 | None:intergenic | 30.0% | |
| TGTTGAATGCTACTATTTGT+TGG | + | chr7_2:79202017-79202036 | None:intergenic | 30.0% | |
| GGATAATAATTAGGCAATAC+AGG | + | chr7_2:79202149-79202168 | None:intergenic | 30.0% | |
| AGTTAGGTATTAATGGTTTG+AGG | - | chr7_2:79202247-79202266 | Msa1079930:CDS | 30.0% | |
| ATAGTTGTAGAAGAAGCTTA+AGG | + | chr7_2:79200031-79200050 | None:intergenic | 30.0% | |
| AAAAAGAGGGGAAATAACTT+GGG | + | chr7_2:79200203-79200222 | None:intergenic | 30.0% | |
| AAAAAAGAGGGGAAATAACT+TGG | + | chr7_2:79200204-79200223 | None:intergenic | 30.0% | |
| CATAAGTGAGTGTCTAATTA+AGG | + | chr7_2:79200300-79200319 | None:intergenic | 30.0% | |
| GAGAAATGGTATGAATATGA+TGG | - | chr7_2:79200496-79200515 | Msa1079930:intron | 30.0% | |
| ATGGATGAAATGAACATTGA+TGG | - | chr7_2:79200731-79200750 | Msa1079930:intron | 30.0% | |
| ! | GGTCTAACTTTATTTCTTCT+TGG | + | chr7_2:79200823-79200842 | None:intergenic | 30.0% |
| AAATAAAGTTAGACCCTGAA+AGG | - | chr7_2:79200828-79200847 | Msa1079930:intron | 30.0% | |
| !! | AAGAGGTACCTAATTATCTT+TGG | - | chr7_2:79201011-79201030 | Msa1079930:intron | 30.0% |
| !!! | TTGGATTTTTTGTATAGGCT+AGG | - | chr7_2:79201030-79201049 | Msa1079930:intron | 30.0% |
| CCTCAAACTTGAAATGTAAT+AGG | + | chr7_2:79201368-79201387 | None:intergenic | 30.0% | |
| !! | CCTATTACATTTCAAGTTTG+AGG | - | chr7_2:79201365-79201384 | Msa1079930:CDS | 30.0% |
| !!! | ATGTGCTTTTTTCTATTTCG+GGG | - | chr7_2:79201773-79201792 | Msa1079930:intron | 30.0% |
| CTACATAAATCAACCATTGT+AGG | + | chr7_2:79201854-79201873 | None:intergenic | 30.0% | |
| TGTTGAATGCTACTATTTGT+TGG | + | chr7_2:79202017-79202036 | None:intergenic | 30.0% | |
| GGATAATAATTAGGCAATAC+AGG | + | chr7_2:79202149-79202168 | None:intergenic | 30.0% | |
| AGTTAGGTATTAATGGTTTG+AGG | - | chr7_2:79202247-79202266 | Msa1079930:CDS | 30.0% | |
| ! | CTCTCATTCCAATCCATTTT+AGG | + | chr7_2:79199976-79199995 | None:intergenic | 35.0% |
| TATAACAACACCCCTTATTC+AGG | - | chr7_2:79200048-79200067 | Msa1079930:three_prime_UTR | 35.0% | |
| TAGGGTGTACAAAGAAATGA+AGG | - | chr7_2:79200471-79200490 | Msa1079930:intron | 35.0% | |
| AAGAAATGAAGGCAGAGAAA+TGG | - | chr7_2:79200482-79200501 | Msa1079930:intron | 35.0% | |
| TTATTGTCATTGGTGTATGC+TGG | - | chr7_2:79200644-79200663 | Msa1079930:intron | 35.0% | |
| TTGGTGTATGCTGGAAAATT+AGG | - | chr7_2:79200653-79200672 | Msa1079930:intron | 35.0% | |
| GTATGCTGGAAAATTAGGAA+TGG | - | chr7_2:79200658-79200677 | Msa1079930:intron | 35.0% | |
| ATGTTCATTTCATCCATAGC+TGG | + | chr7_2:79200728-79200747 | None:intergenic | 35.0% | |
| ! | AAGTAACCAGATTGATTCAC+TGG | - | chr7_2:79200787-79200806 | Msa1079930:intron | 35.0% |
| AAAGCTTCATCTTCCTTTCA+GGG | + | chr7_2:79200844-79200863 | None:intergenic | 35.0% | |
| ! | TTTGGAACCAAACAGCAATT+TGG | + | chr7_2:79200892-79200911 | None:intergenic | 35.0% |
| !! | TTGCTGTTTGGTTCCAAAAT+AGG | - | chr7_2:79200894-79200913 | Msa1079930:intron | 35.0% |
| AGAATTTGATGTTGTCTCCA+AGG | - | chr7_2:79200970-79200989 | Msa1079930:intron | 35.0% | |
| !! | TTGGAGTTTCTGTTTTTCCT+TGG | + | chr7_2:79200990-79201009 | None:intergenic | 35.0% |
| AAAACAGAAACTCCAAGAAG+AGG | - | chr7_2:79200994-79201013 | Msa1079930:intron | 35.0% | |
| GATAATTAGGTACCTCTTCT+TGG | + | chr7_2:79201009-79201028 | None:intergenic | 35.0% | |
| AAATCAGACTTACGCCTATT+AGG | + | chr7_2:79201296-79201315 | None:intergenic | 35.0% | |
| ATAGGTCTCTAAGCTTCTAA+AGG | + | chr7_2:79201350-79201369 | None:intergenic | 35.0% | |
| AACCTAGTATTACCCTACAA+TGG | - | chr7_2:79201838-79201857 | Msa1079930:intron | 35.0% | |
| AACCATTGTAGGGTAATACT+AGG | + | chr7_2:79201843-79201862 | None:intergenic | 35.0% | |
| ACACAGGTTATGAAGTTGAA+GGG | - | chr7_2:79201894-79201913 | Msa1079930:intron | 35.0% | |
| ! | AGCAATCAGGTGGTAATTTT+AGG | - | chr7_2:79201928-79201947 | Msa1079930:intron | 35.0% |
| ! | TTGTTATTGTATCCCTGATC+TGG | + | chr7_2:79202047-79202066 | None:intergenic | 35.0% |
| ! | CTCTCATTCCAATCCATTTT+AGG | + | chr7_2:79199976-79199995 | None:intergenic | 35.0% |
| TATAACAACACCCCTTATTC+AGG | - | chr7_2:79200048-79200067 | Msa1079930:three_prime_UTR | 35.0% | |
| TAGGGTGTACAAAGAAATGA+AGG | - | chr7_2:79200471-79200490 | Msa1079930:intron | 35.0% | |
| AAGAAATGAAGGCAGAGAAA+TGG | - | chr7_2:79200482-79200501 | Msa1079930:intron | 35.0% | |
| TTATTGTCATTGGTGTATGC+TGG | - | chr7_2:79200644-79200663 | Msa1079930:intron | 35.0% | |
| TTGGTGTATGCTGGAAAATT+AGG | - | chr7_2:79200653-79200672 | Msa1079930:intron | 35.0% | |
| GTATGCTGGAAAATTAGGAA+TGG | - | chr7_2:79200658-79200677 | Msa1079930:intron | 35.0% | |
| ATGTTCATTTCATCCATAGC+TGG | + | chr7_2:79200728-79200747 | None:intergenic | 35.0% | |
| ! | AAGTAACCAGATTGATTCAC+TGG | - | chr7_2:79200787-79200806 | Msa1079930:intron | 35.0% |
| AAAGCTTCATCTTCCTTTCA+GGG | + | chr7_2:79200844-79200863 | None:intergenic | 35.0% | |
| ! | TTTGGAACCAAACAGCAATT+TGG | + | chr7_2:79200892-79200911 | None:intergenic | 35.0% |
| !! | TTGCTGTTTGGTTCCAAAAT+AGG | - | chr7_2:79200894-79200913 | Msa1079930:intron | 35.0% |
| AGAATTTGATGTTGTCTCCA+AGG | - | chr7_2:79200970-79200989 | Msa1079930:intron | 35.0% | |
| !! | TTGGAGTTTCTGTTTTTCCT+TGG | + | chr7_2:79200990-79201009 | None:intergenic | 35.0% |
| AAAACAGAAACTCCAAGAAG+AGG | - | chr7_2:79200994-79201013 | Msa1079930:intron | 35.0% | |
| GATAATTAGGTACCTCTTCT+TGG | + | chr7_2:79201009-79201028 | None:intergenic | 35.0% | |
| AAATCAGACTTACGCCTATT+AGG | + | chr7_2:79201296-79201315 | None:intergenic | 35.0% | |
| ATAGGTCTCTAAGCTTCTAA+AGG | + | chr7_2:79201350-79201369 | None:intergenic | 35.0% | |
| AACCTAGTATTACCCTACAA+TGG | - | chr7_2:79201838-79201857 | Msa1079930:intron | 35.0% | |
| AACCATTGTAGGGTAATACT+AGG | + | chr7_2:79201843-79201862 | None:intergenic | 35.0% | |
| ACACAGGTTATGAAGTTGAA+GGG | - | chr7_2:79201894-79201913 | Msa1079930:intron | 35.0% | |
| ! | AGCAATCAGGTGGTAATTTT+AGG | - | chr7_2:79201928-79201947 | Msa1079930:intron | 35.0% |
| ! | TTGTTATTGTATCCCTGATC+TGG | + | chr7_2:79202047-79202066 | None:intergenic | 35.0% |
| GAAGAAGCTTAAGGAAGACT+CGG | + | chr7_2:79200022-79200041 | None:intergenic | 40.0% | |
| ! | ATTCTAGAGAGAGAGAGAGA+AGG | + | chr7_2:79200153-79200172 | None:intergenic | 40.0% |
| GAAATGAGTCAACCGTCATT+GGG | - | chr7_2:79200680-79200699 | Msa1079930:intron | 40.0% | |
| ACAAAGGTTACTTCCAGCTA+TGG | - | chr7_2:79200712-79200731 | Msa1079930:intron | 40.0% | |
| TCTTCTCCAGTGAATCAATC+TGG | + | chr7_2:79200796-79200815 | None:intergenic | 40.0% | |
| GAAAGCTTCATCTTCCTTTC+AGG | + | chr7_2:79200845-79200864 | None:intergenic | 40.0% | |
| ATGAAGCTTTCAAGAGAGCT+AGG | - | chr7_2:79200854-79200873 | Msa1079930:intron | 40.0% | |
| TGAAGCTTTCAAGAGAGCTA+GGG | - | chr7_2:79200855-79200874 | Msa1079930:intron | 40.0% | |
| ! | TAATGCAAGAGGTACATGGA+GGG | + | chr7_2:79201137-79201156 | None:intergenic | 40.0% |
| ! | ATAATGCAAGAGGTACATGG+AGG | + | chr7_2:79201138-79201157 | None:intergenic | 40.0% |
| ! | CACATAATGCAAGAGGTACA+TGG | + | chr7_2:79201141-79201160 | None:intergenic | 40.0% |
| CACACAGGTTATGAAGTTGA+AGG | - | chr7_2:79201893-79201912 | Msa1079930:intron | 40.0% | |
| GGAAAGCTAAAAGAGCAATC+AGG | - | chr7_2:79201915-79201934 | Msa1079930:intron | 40.0% | |
| AAGCTAAAAGAGCAATCAGG+TGG | - | chr7_2:79201918-79201937 | Msa1079930:intron | 40.0% | |
| ! | ACAGTAGAAAGCACATCAGA+AGG | - | chr7_2:79201972-79201991 | Msa1079930:intron | 40.0% |
| GAAGAAGCTTAAGGAAGACT+CGG | + | chr7_2:79200022-79200041 | None:intergenic | 40.0% | |
| ! | ATTCTAGAGAGAGAGAGAGA+AGG | + | chr7_2:79200153-79200172 | None:intergenic | 40.0% |
| GAAATGAGTCAACCGTCATT+GGG | - | chr7_2:79200680-79200699 | Msa1079930:intron | 40.0% | |
| ACAAAGGTTACTTCCAGCTA+TGG | - | chr7_2:79200712-79200731 | Msa1079930:intron | 40.0% | |
| TCTTCTCCAGTGAATCAATC+TGG | + | chr7_2:79200796-79200815 | None:intergenic | 40.0% | |
| GAAAGCTTCATCTTCCTTTC+AGG | + | chr7_2:79200845-79200864 | None:intergenic | 40.0% | |
| ATGAAGCTTTCAAGAGAGCT+AGG | - | chr7_2:79200854-79200873 | Msa1079930:intron | 40.0% | |
| TGAAGCTTTCAAGAGAGCTA+GGG | - | chr7_2:79200855-79200874 | Msa1079930:intron | 40.0% | |
| ! | TAATGCAAGAGGTACATGGA+GGG | + | chr7_2:79201137-79201156 | None:intergenic | 40.0% |
| ! | ATAATGCAAGAGGTACATGG+AGG | + | chr7_2:79201138-79201157 | None:intergenic | 40.0% |
| ! | CACATAATGCAAGAGGTACA+TGG | + | chr7_2:79201141-79201160 | None:intergenic | 40.0% |
| CACACAGGTTATGAAGTTGA+AGG | - | chr7_2:79201893-79201912 | Msa1079930:intron | 40.0% | |
| GGAAAGCTAAAAGAGCAATC+AGG | - | chr7_2:79201915-79201934 | Msa1079930:intron | 40.0% | |
| AAGCTAAAAGAGCAATCAGG+TGG | - | chr7_2:79201918-79201937 | Msa1079930:intron | 40.0% | |
| ! | ACAGTAGAAAGCACATCAGA+AGG | - | chr7_2:79201972-79201991 | Msa1079930:intron | 40.0% |
| ! | GACTCGGTATGAGGAACAAA+GGG | + | chr7_2:79200006-79200025 | None:intergenic | 45.0% |
| ! | AGACTCGGTATGAGGAACAA+AGG | + | chr7_2:79200007-79200026 | None:intergenic | 45.0% |
| ! | CTTAAGGAAGACTCGGTATG+AGG | + | chr7_2:79200015-79200034 | None:intergenic | 45.0% |
| GGAAATGAGTCAACCGTCAT+TGG | - | chr7_2:79200679-79200698 | Msa1079930:intron | 45.0% | |
| TGTTGTGTCTCACCCAATGA+CGG | + | chr7_2:79200695-79200714 | None:intergenic | 45.0% | |
| CATTGGGTGAGACACAACAA+AGG | - | chr7_2:79200696-79200715 | Msa1079930:intron | 45.0% | |
| AAACAGCAATTTGGCGAGGT+TGG | + | chr7_2:79200883-79200902 | None:intergenic | 45.0% | |
| ! | AACCTCGCCAAATTGCTGTT+TGG | - | chr7_2:79200882-79200901 | Msa1079930:intron | 45.0% |
| AACCAAACAGCAATTTGGCG+AGG | + | chr7_2:79200887-79200906 | None:intergenic | 45.0% | |
| GGTTCCAAAATAGGCGTACA+AGG | - | chr7_2:79200903-79200922 | Msa1079930:intron | 45.0% | |
| TCCAAAATAGGCGTACAAGG+TGG | - | chr7_2:79200906-79200925 | Msa1079930:intron | 45.0% | |
| ! | TCCACCTTGTACGCCTATTT+TGG | + | chr7_2:79200910-79200929 | None:intergenic | 45.0% |
| AAATAGGCGTACAAGGTGGA+AGG | - | chr7_2:79200910-79200929 | Msa1079930:intron | 45.0% | |
| ! | TCAATGTGCTCTGAACACAC+AGG | - | chr7_2:79201878-79201897 | Msa1079930:intron | 45.0% |
| TCAACAAGCTGTTCCAGATC+AGG | - | chr7_2:79202031-79202050 | Msa1079930:intron | 45.0% | |
| CAACAAGCTGTTCCAGATCA+GGG | - | chr7_2:79202032-79202051 | Msa1079930:intron | 45.0% | |
| TGCCTCCTAATCAATGTCAC+TGG | - | chr7_2:79202123-79202142 | Msa1079930:intron | 45.0% | |
| ! | ACAGGCCAGTGACATTGATT+AGG | + | chr7_2:79202131-79202150 | None:intergenic | 45.0% |
| ! | GACTCGGTATGAGGAACAAA+GGG | + | chr7_2:79200006-79200025 | None:intergenic | 45.0% |
| ! | AGACTCGGTATGAGGAACAA+AGG | + | chr7_2:79200007-79200026 | None:intergenic | 45.0% |
| ! | CTTAAGGAAGACTCGGTATG+AGG | + | chr7_2:79200015-79200034 | None:intergenic | 45.0% |
| GGAAATGAGTCAACCGTCAT+TGG | - | chr7_2:79200679-79200698 | Msa1079930:intron | 45.0% | |
| TGTTGTGTCTCACCCAATGA+CGG | + | chr7_2:79200695-79200714 | None:intergenic | 45.0% | |
| CATTGGGTGAGACACAACAA+AGG | - | chr7_2:79200696-79200715 | Msa1079930:intron | 45.0% | |
| AAACAGCAATTTGGCGAGGT+TGG | + | chr7_2:79200883-79200902 | None:intergenic | 45.0% | |
| ! | AACCTCGCCAAATTGCTGTT+TGG | - | chr7_2:79200882-79200901 | Msa1079930:intron | 45.0% |
| AACCAAACAGCAATTTGGCG+AGG | + | chr7_2:79200887-79200906 | None:intergenic | 45.0% | |
| GGTTCCAAAATAGGCGTACA+AGG | - | chr7_2:79200903-79200922 | Msa1079930:intron | 45.0% | |
| TCCAAAATAGGCGTACAAGG+TGG | - | chr7_2:79200906-79200925 | Msa1079930:intron | 45.0% | |
| ! | TCCACCTTGTACGCCTATTT+TGG | + | chr7_2:79200910-79200929 | None:intergenic | 45.0% |
| AAATAGGCGTACAAGGTGGA+AGG | - | chr7_2:79200910-79200929 | Msa1079930:intron | 45.0% | |
| ! | TCAATGTGCTCTGAACACAC+AGG | - | chr7_2:79201878-79201897 | Msa1079930:intron | 45.0% |
| TCAACAAGCTGTTCCAGATC+AGG | - | chr7_2:79202031-79202050 | Msa1079930:intron | 45.0% | |
| CAACAAGCTGTTCCAGATCA+GGG | - | chr7_2:79202032-79202051 | Msa1079930:intron | 45.0% | |
| TGCCTCCTAATCAATGTCAC+TGG | - | chr7_2:79202123-79202142 | Msa1079930:intron | 45.0% | |
| ! | ACAGGCCAGTGACATTGATT+AGG | + | chr7_2:79202131-79202150 | None:intergenic | 45.0% |
| !!! | ATTTTATGTTTTTTTTTTTT+TGG | + | chr7_2:79201212-79201231 | None:intergenic | 5.0% |
| !!! | ATTTATTTTTTTACTTTTTT+TGG | + | chr7_2:79201424-79201443 | None:intergenic | 5.0% |
| !!! | ATTTTATGTTTTTTTTTTTT+TGG | + | chr7_2:79201212-79201231 | None:intergenic | 5.0% |
| !!! | ATTTATTTTTTTACTTTTTT+TGG | + | chr7_2:79201424-79201443 | None:intergenic | 5.0% |
| ! | GGCCAGTGACATTGATTAGG+AGG | + | chr7_2:79202128-79202147 | None:intergenic | 50.0% |
| ! | GGCCAGTGACATTGATTAGG+AGG | + | chr7_2:79202128-79202147 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79199967 | 79202294 | 79199967 | ID=Msa1079930;Name=Msa1079930 |
| chr7_2 | mRNA | 79199967 | 79202294 | 79199967 | ID=Msa1079930-mRNA-1;Parent=Msa1079930;Name=Msa1079930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=12|1|1|1|0.5|0.33|3|122|234 |
| chr7_2 | exon | 79199967 | 79200361 | 79199967 | ID=Msa1079930-mRNA-1:exon:19916;Parent=Msa1079930-mRNA-1 |
| chr7_2 | exon | 79201246 | 79201586 | 79201246 | ID=Msa1079930-mRNA-1:exon:19915;Parent=Msa1079930-mRNA-1 |
| chr7_2 | exon | 79202192 | 79202294 | 79202192 | ID=Msa1079930-mRNA-1:exon:19914;Parent=Msa1079930-mRNA-1 |
| chr7_2 | five_prime_UTR | 79202283 | 79202294 | 79202283 | ID=Msa1079930-mRNA-1:five_prime_utr;Parent=Msa1079930-mRNA-1 |
| chr7_2 | CDS | 79202192 | 79202282 | 79202192 | ID=Msa1079930-mRNA-1:cds;Parent=Msa1079930-mRNA-1 |
| chr7_2 | CDS | 79201246 | 79201586 | 79201246 | ID=Msa1079930-mRNA-1:cds;Parent=Msa1079930-mRNA-1 |
| chr7_2 | CDS | 79200089 | 79200361 | 79200089 | ID=Msa1079930-mRNA-1:cds;Parent=Msa1079930-mRNA-1 |
| chr7_2 | three_prime_UTR | 79199967 | 79200088 | 79199967 | ID=Msa1079930-mRNA-1:three_prime_utr;Parent=Msa1079930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
