Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124860 | XP_013450066.1 | 97.447 | 235 | 3 | 1 | 1 | 235 | 1 | 232 | 6.49e-168 | 472 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124860 | sp|Q9LZR0|ATB51_ARATH | 52.299 | 174 | 64 | 4 | 16 | 174 | 25 | 194 | 9.47e-46 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124860 | A0A072U315 | 97.447 | 235 | 3 | 1 | 1 | 235 | 1 | 232 | 3.10e-168 | 472 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1124860 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1042110 | Msa1124860 | 0.885373 | 8.601197e-72 | -8.615850e-47 |
| Msa1079930 | Msa1124860 | 0.855067 | 8.086577e-62 | -8.615850e-47 |
| Msa1124860 | Msa1167530 | 0.828871 | 7.065442e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124860 | MtrunA17_Chr7g0265521 | 97.447 | 235 | 3 | 1 | 1 | 235 | 1 | 232 | 5.97e-172 | 472 |
| Msa1124860 | MtrunA17_Chr1g0179581 | 73.000 | 100 | 25 | 1 | 46 | 145 | 13 | 110 | 6.38e-46 | 148 |
| Msa1124860 | MtrunA17_Chr8g0362151 | 45.652 | 138 | 59 | 2 | 21 | 151 | 44 | 172 | 6.58e-33 | 120 |
| Msa1124860 | MtrunA17_Chr6g0450991 | 58.824 | 102 | 35 | 1 | 62 | 156 | 66 | 167 | 7.25e-32 | 117 |
| Msa1124860 | MtrunA17_Chr5g0416391 | 50.926 | 108 | 46 | 1 | 51 | 151 | 65 | 172 | 2.67e-30 | 113 |
| Msa1124860 | MtrunA17_Chr4g0060031 | 48.889 | 135 | 49 | 4 | 62 | 176 | 94 | 228 | 5.50e-30 | 114 |
| Msa1124860 | MtrunA17_Chr3g0119291 | 47.761 | 134 | 68 | 2 | 56 | 187 | 52 | 185 | 1.22e-29 | 111 |
| Msa1124860 | MtrunA17_Chr3g0123691 | 46.774 | 124 | 57 | 2 | 41 | 155 | 36 | 159 | 1.03e-28 | 110 |
| Msa1124860 | MtrunA17_Chr7g0217111 | 48.462 | 130 | 63 | 2 | 51 | 176 | 67 | 196 | 1.04e-28 | 109 |
| Msa1124860 | MtrunA17_Chr6g0453021 | 55.435 | 92 | 41 | 0 | 62 | 153 | 95 | 186 | 3.94e-28 | 107 |
| Msa1124860 | MtrunA17_Chr8g0381741 | 46.341 | 123 | 58 | 2 | 40 | 155 | 32 | 153 | 1.05e-27 | 107 |
| Msa1124860 | MtrunA17_Chr5g0415941 | 55.670 | 97 | 36 | 1 | 63 | 152 | 87 | 183 | 7.54e-27 | 105 |
| Msa1124860 | MtrunA17_Chr8g0362751 | 52.577 | 97 | 39 | 1 | 63 | 152 | 89 | 185 | 8.36e-25 | 99.4 |
| Msa1124860 | MtrunA17_Chr3g0127511 | 37.179 | 156 | 84 | 3 | 65 | 220 | 40 | 181 | 1.45e-24 | 97.8 |
| Msa1124860 | MtrunA17_Chr8g0346251 | 42.857 | 119 | 56 | 3 | 67 | 175 | 45 | 161 | 3.97e-21 | 88.6 |
| Msa1124860 | MtrunA17_Chr4g0054421 | 47.368 | 95 | 50 | 0 | 56 | 150 | 120 | 214 | 1.64e-20 | 87.4 |
| Msa1124860 | MtrunA17_Chr5g0403701 | 47.826 | 92 | 48 | 0 | 63 | 154 | 53 | 144 | 1.29e-19 | 83.6 |
| Msa1124860 | MtrunA17_Chr4g0055851 | 44.211 | 95 | 52 | 1 | 56 | 150 | 114 | 207 | 2.61e-18 | 81.6 |
| Msa1124860 | MtrunA17_Chr1g0175651 | 42.105 | 95 | 55 | 0 | 56 | 150 | 147 | 241 | 1.01e-17 | 80.1 |
| Msa1124860 | MtrunA17_Chr5g0403691 | 47.475 | 99 | 45 | 2 | 63 | 154 | 53 | 151 | 1.68e-17 | 78.2 |
| Msa1124860 | MtrunA17_Chr1g0151971 | 42.308 | 104 | 60 | 0 | 47 | 150 | 114 | 217 | 1.85e-17 | 79.3 |
| Msa1124860 | MtrunA17_Chr7g0258831 | 41.935 | 93 | 54 | 0 | 58 | 150 | 155 | 247 | 4.52e-17 | 78.6 |
| Msa1124860 | MtrunA17_Chr5g0399491 | 45.455 | 88 | 48 | 0 | 63 | 150 | 136 | 223 | 1.20e-16 | 77.4 |
| Msa1124860 | MtrunA17_Chr5g0400781 | 44.681 | 94 | 51 | 1 | 56 | 149 | 117 | 209 | 2.04e-16 | 76.3 |
| Msa1124860 | MtrunA17_Chr2g0308611 | 40.000 | 100 | 60 | 0 | 51 | 150 | 188 | 287 | 2.45e-16 | 77.0 |
| Msa1124860 | MtrunA17_Chr8g0335131 | 43.182 | 88 | 50 | 0 | 63 | 150 | 146 | 233 | 1.30e-15 | 74.3 |
| Msa1124860 | MtrunA17_Chr4g0044091 | 42.268 | 97 | 55 | 1 | 54 | 150 | 57 | 152 | 1.76e-15 | 72.4 |
| Msa1124860 | MtrunA17_Chr4g0071411 | 44.048 | 84 | 47 | 0 | 66 | 149 | 91 | 174 | 2.53e-14 | 69.7 |
| Msa1124860 | MtrunA17_Chr6g0481041 | 41.000 | 100 | 54 | 2 | 61 | 158 | 28 | 124 | 7.69e-12 | 64.3 |
| Msa1124860 | MtrunA17_Chr5g0410711 | 36.937 | 111 | 64 | 2 | 51 | 158 | 77 | 184 | 9.32e-12 | 64.3 |
| Msa1124860 | MtrunA17_Chr2g0299031 | 32.667 | 150 | 91 | 4 | 4 | 150 | 27 | 169 | 1.43e-11 | 62.0 |
| Msa1124860 | MtrunA17_Chr2g0331581 | 41.463 | 82 | 48 | 0 | 66 | 147 | 145 | 226 | 1.68e-11 | 63.5 |
| Msa1124860 | MtrunA17_Chr3g0135331 | 39.535 | 86 | 51 | 1 | 50 | 135 | 133 | 217 | 1.73e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1124860 | AT5G03790.1 | 52.299 | 174 | 64 | 4 | 16 | 174 | 25 | 194 | 9.62e-47 | 155 |
| Msa1124860 | AT5G03790.2 | 57.447 | 141 | 49 | 2 | 16 | 148 | 25 | 162 | 1.69e-43 | 145 |
| Msa1124860 | AT2G36610.1 | 47.879 | 165 | 68 | 3 | 10 | 156 | 8 | 172 | 1.83e-39 | 135 |
| Msa1124860 | AT1G69780.1 | 48.201 | 139 | 53 | 3 | 56 | 187 | 78 | 204 | 6.62e-32 | 118 |
| Msa1124860 | AT5G65310.2 | 55.914 | 93 | 41 | 0 | 62 | 154 | 53 | 145 | 9.04e-29 | 110 |
| Msa1124860 | AT5G65310.1 | 55.914 | 93 | 41 | 0 | 62 | 154 | 71 | 163 | 9.23e-29 | 110 |
| Msa1124860 | AT2G22430.1 | 57.143 | 98 | 35 | 1 | 62 | 152 | 61 | 158 | 1.45e-28 | 110 |
| Msa1124860 | AT5G15150.1 | 53.846 | 104 | 46 | 1 | 51 | 152 | 101 | 204 | 1.51e-28 | 110 |
| Msa1124860 | AT4G40060.1 | 45.588 | 136 | 58 | 3 | 33 | 152 | 20 | 155 | 4.97e-28 | 108 |
| Msa1124860 | AT3G01470.1 | 54.545 | 99 | 38 | 1 | 62 | 153 | 67 | 165 | 8.40e-28 | 107 |
| Msa1124860 | AT3G01220.1 | 48.000 | 125 | 54 | 3 | 38 | 151 | 58 | 182 | 2.10e-26 | 103 |
| Msa1124860 | AT1G26960.1 | 50.000 | 108 | 47 | 1 | 51 | 151 | 59 | 166 | 2.37e-26 | 103 |
| Msa1124860 | AT4G36740.2 | 52.577 | 97 | 46 | 0 | 56 | 152 | 49 | 145 | 6.39e-25 | 98.2 |
| Msa1124860 | AT4G36740.1 | 52.577 | 97 | 46 | 0 | 56 | 152 | 48 | 144 | 6.79e-25 | 98.2 |
| Msa1124860 | AT2G46680.1 | 46.364 | 110 | 48 | 2 | 47 | 149 | 20 | 125 | 1.21e-24 | 98.6 |
| Msa1124860 | AT2G46680.2 | 46.296 | 108 | 47 | 2 | 47 | 147 | 20 | 123 | 1.08e-23 | 95.9 |
| Msa1124860 | AT2G18550.1 | 42.857 | 126 | 63 | 1 | 63 | 188 | 61 | 177 | 2.64e-23 | 94.0 |
| Msa1124860 | AT1G27045.1 | 45.669 | 127 | 57 | 4 | 48 | 164 | 50 | 174 | 8.03e-23 | 93.2 |
| Msa1124860 | AT1G27045.5 | 45.669 | 127 | 57 | 4 | 48 | 164 | 7 | 131 | 1.28e-22 | 91.3 |
| Msa1124860 | AT1G27045.3 | 45.669 | 127 | 57 | 4 | 48 | 164 | 7 | 131 | 1.28e-22 | 91.3 |
| Msa1124860 | AT3G61890.1 | 47.778 | 90 | 40 | 1 | 66 | 148 | 33 | 122 | 1.46e-22 | 92.4 |
| Msa1124860 | AT1G27045.2 | 46.400 | 125 | 55 | 4 | 50 | 164 | 1 | 123 | 2.14e-22 | 90.5 |
| Msa1124860 | AT5G66700.1 | 48.913 | 92 | 47 | 0 | 63 | 154 | 71 | 162 | 7.09e-21 | 87.8 |
| Msa1124860 | AT1G27045.4 | 45.045 | 111 | 51 | 3 | 48 | 148 | 50 | 160 | 5.29e-20 | 85.9 |
| Msa1124860 | AT5G53980.1 | 44.086 | 93 | 52 | 0 | 61 | 153 | 9 | 101 | 2.73e-18 | 79.3 |
| Msa1124860 | AT5G06710.1 | 43.564 | 101 | 57 | 0 | 49 | 149 | 176 | 276 | 5.72e-18 | 81.6 |
| Msa1124860 | AT5G47370.1 | 41.489 | 94 | 55 | 0 | 56 | 149 | 123 | 216 | 1.14e-16 | 77.4 |
| Msa1124860 | AT4G16780.1 | 42.105 | 95 | 54 | 1 | 56 | 150 | 123 | 216 | 1.30e-16 | 77.4 |
| Msa1124860 | AT2G22800.1 | 45.977 | 87 | 47 | 0 | 63 | 149 | 113 | 199 | 2.19e-16 | 76.6 |
| Msa1124860 | AT3G60390.1 | 41.053 | 95 | 56 | 0 | 56 | 150 | 155 | 249 | 6.26e-16 | 75.9 |
| Msa1124860 | AT2G44910.1 | 43.182 | 88 | 50 | 0 | 63 | 150 | 163 | 250 | 1.12e-15 | 75.1 |
| Msa1124860 | AT2G01430.1 | 44.211 | 95 | 53 | 0 | 56 | 150 | 132 | 226 | 2.20e-15 | 73.9 |
| Msa1124860 | AT4G37790.1 | 44.318 | 88 | 49 | 0 | 63 | 150 | 126 | 213 | 3.35e-15 | 73.6 |
| Msa1124860 | AT4G17460.1 | 39.000 | 100 | 61 | 0 | 51 | 150 | 123 | 222 | 3.71e-15 | 73.2 |
| Msa1124860 | AT1G79840.2 | 38.462 | 104 | 62 | 1 | 57 | 158 | 125 | 228 | 7.82e-14 | 70.9 |
| Msa1124860 | AT1G79840.1 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 7.97e-14 | 70.9 |
| Msa1124860 | AT1G79840.3 | 38.462 | 104 | 62 | 1 | 57 | 158 | 38 | 141 | 8.64e-14 | 70.5 |
| Msa1124860 | AT1G79840.6 | 38.462 | 104 | 62 | 1 | 57 | 158 | 38 | 141 | 8.64e-14 | 70.5 |
| Msa1124860 | AT1G79840.5 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 9.17e-14 | 70.5 |
| Msa1124860 | AT1G79840.4 | 38.462 | 104 | 62 | 1 | 57 | 158 | 96 | 199 | 1.27e-13 | 70.1 |
| Msa1124860 | AT1G73360.1 | 43.000 | 100 | 52 | 2 | 61 | 158 | 31 | 127 | 1.07e-12 | 67.4 |
| Msa1124860 | AT1G70920.2 | 35.659 | 129 | 77 | 2 | 22 | 150 | 4 | 126 | 1.82e-12 | 63.9 |
| Msa1124860 | AT1G70920.1 | 35.659 | 129 | 77 | 2 | 22 | 150 | 34 | 156 | 2.09e-12 | 64.3 |
| Msa1124860 | AT5G06710.4 | 48.485 | 66 | 34 | 0 | 49 | 114 | 176 | 241 | 5.17e-12 | 64.3 |
| Msa1124860 | AT5G46880.3 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.98e-11 | 62.4 |
| Msa1124860 | AT5G46880.1 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.98e-11 | 62.4 |
| Msa1124860 | AT5G46880.2 | 39.773 | 88 | 53 | 0 | 61 | 148 | 112 | 199 | 4.98e-11 | 62.4 |
| Msa1124860 | AT3G61150.1 | 33.333 | 120 | 71 | 2 | 51 | 168 | 99 | 211 | 7.97e-11 | 62.0 |
Find 53 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCTTCATCTTCCTTTC+AGG | 0.091903 | 7_3:+76089611 | None:intergenic |
| TCCACCTTGTACGCCTATTT+TGG | 0.171135 | 7_3:+76089546 | None:intergenic |
| TTGCTGTTTGGTTCCAAAAT+AGG | 0.192526 | 7_3:-76089559 | Msa1124860:CDS |
| GATAATTAGGTACCTCTTCT+TGG | 0.238895 | 7_3:+76089447 | None:intergenic |
| TACTAGTAGTTAGGTATTAA+TGG | 0.239424 | 7_3:-76088240 | Msa1124860:three_prime_UTR |
| GGTCTAACTTTATTTCTTCT+TGG | 0.251946 | 7_3:+76089633 | None:intergenic |
| TTTGGAACCAAACAGCAATT+TGG | 0.278055 | 7_3:+76089564 | None:intergenic |
| TTGACTTATAATGTAGATTA+GGG | 0.282962 | 7_3:+76088313 | None:intergenic |
| TTTGACTTATAATGTAGATT+AGG | 0.293903 | 7_3:+76088312 | None:intergenic |
| GTAGATTAGGGATAATAATT+AGG | 0.330622 | 7_3:+76088325 | None:intergenic |
| TTGTTATTGTATCCCTGATC+TGG | 0.353848 | 7_3:+76088439 | None:intergenic |
| TATAACAACACCCCTTATTC+AGG | 0.354916 | 7_3:-76090306 | Msa1124860:intron |
| AAAGCTTCATCTTCCTTTCA+GGG | 0.372499 | 7_3:+76089612 | None:intergenic |
| AACCTCGCCAAATTGCTGTT+TGG | 0.376064 | 7_3:-76089571 | Msa1124860:CDS |
| TGTTGAATGCTACTATTTGT+TGG | 0.395823 | 7_3:+76088469 | None:intergenic |
| GGAAATGAGTCAACCGTCAT+TGG | 0.398063 | 7_3:-76089774 | Msa1124860:CDS |
| TCAACAAGCTGTTCCAGATC+AGG | 0.398083 | 7_3:-76088452 | Msa1124860:CDS |
| GGATAATAATTAGGCAATAC+AGG | 0.433929 | 7_3:+76088334 | None:intergenic |
| ATGAAGCTTTCAAGAGAGCT+AGG | 0.447660 | 7_3:-76089599 | Msa1124860:CDS |
| ATAGTTGTAGAAGAAGCTTA+AGG | 0.450197 | 7_3:+76090326 | None:intergenic |
| ATGGATGAAATGAACATTGA+TGG | 0.450308 | 7_3:-76089722 | Msa1124860:CDS |
| ACAGGCCAGTGACATTGATT+AGG | 0.461524 | 7_3:+76088352 | None:intergenic |
| AGTTAGGTATTAATGGTTTG+AGG | 0.469550 | 7_3:-76088233 | Msa1124860:three_prime_UTR |
| AAGTAACCAGATTGATTCAC+TGG | 0.476965 | 7_3:-76089666 | Msa1124860:CDS |
| TCTTCTCCAGTGAATCAATC+TGG | 0.478388 | 7_3:+76089660 | None:intergenic |
| AAACAGCAATTTGGCGAGGT+TGG | 0.478872 | 7_3:+76089573 | None:intergenic |
| GGTTCCAAAATAGGCGTACA+AGG | 0.492609 | 7_3:-76089550 | Msa1124860:CDS |
| ATGTTCATTTCATCCATAGC+TGG | 0.495881 | 7_3:+76089728 | None:intergenic |
| AGTGAAAGCCTAAAATGGAT+TGG | 0.500919 | 7_3:-76090389 | Msa1124860:exon |
| CTTAAGGAAGACTCGGTATG+AGG | 0.509787 | 7_3:+76090342 | None:intergenic |
| GAAATGAGTCAACCGTCATT+GGG | 0.510295 | 7_3:-76089773 | Msa1124860:CDS |
| AGAATTTGATGTTGTCTCCA+AGG | 0.530430 | 7_3:-76089483 | Msa1124860:CDS |
| ATATCCCATATAGTTCTGAA+TGG | 0.532778 | 7_3:+76088196 | None:intergenic |
| GACTCGGTATGAGGAACAAA+GGG | 0.536486 | 7_3:+76090351 | None:intergenic |
| ACAAAGGTTACTTCCAGCTA+TGG | 0.541285 | 7_3:-76089741 | Msa1124860:CDS |
| CACACAGGTTATGAAGTTGA+AGG | 0.545029 | 7_3:-76088590 | Msa1124860:intron |
| GGAAAGCTAAAAGAGCAATC+AGG | 0.547065 | 7_3:-76088568 | Msa1124860:CDS |
| CAACAAGCTGTTCCAGATCA+GGG | 0.555767 | 7_3:-76088451 | Msa1124860:CDS |
| TGCCTCCTAATCAATGTCAC+TGG | 0.563013 | 7_3:-76088357 | Msa1124860:CDS |
| AAATAAAGTTAGACCCTGAA+AGG | 0.563460 | 7_3:-76089625 | Msa1124860:CDS |
| GGCCAGTGACATTGATTAGG+AGG | 0.565142 | 7_3:+76088355 | None:intergenic |
| ACAGTAGAAAGCACATCAGA+AGG | 0.569739 | 7_3:-76088511 | Msa1124860:CDS |
| TGAAGCTTTCAAGAGAGCTA+GGG | 0.584376 | 7_3:-76089598 | Msa1124860:CDS |
| ACACAGGTTATGAAGTTGAA+GGG | 0.593093 | 7_3:-76088589 | Msa1124860:intron |
| AGACTCGGTATGAGGAACAA+AGG | 0.604496 | 7_3:+76090350 | None:intergenic |
| TGTTGTGTCTCACCCAATGA+CGG | 0.608704 | 7_3:+76089761 | None:intergenic |
| AAATAGGCGTACAAGGTGGA+AGG | 0.609407 | 7_3:-76089543 | Msa1124860:CDS |
| AAAACAGAAACTCCAAGAAG+AGG | 0.620624 | 7_3:-76089459 | Msa1124860:intron |
| GAAGAAGCTTAAGGAAGACT+CGG | 0.638190 | 7_3:+76090335 | None:intergenic |
| AACCAAACAGCAATTTGGCG+AGG | 0.655043 | 7_3:+76089569 | None:intergenic |
| TCCAAAATAGGCGTACAAGG+TGG | 0.664815 | 7_3:-76089547 | Msa1124860:CDS |
| AAGCTAAAAGAGCAATCAGG+TGG | 0.690901 | 7_3:-76088565 | Msa1124860:CDS |
| CATTGGGTGAGACACAACAA+AGG | 0.711095 | 7_3:-76089757 | Msa1124860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGAAAAAAGAAAA+GGG | + | chr7_3:76088452-76088471 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAAAAAGAAA+AGG | + | chr7_3:76088453-76088472 | None:intergenic | 10.0% |
| !! | AAAAAAAAGAAAAAAGAAAA+GGG | + | chr7_3:76088452-76088471 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAAAAAGAAA+AGG | + | chr7_3:76088453-76088472 | None:intergenic | 10.0% |
| !! | AAAAATAGCTAAAAAAACAT+TGG | + | chr7_3:76088341-76088360 | None:intergenic | 15.0% |
| !! | AAAAAAAGAAAAAAGAAAAG+GGG | + | chr7_3:76088451-76088470 | None:intergenic | 15.0% |
| !! | AGAAAAAAAAATTGTATGAT+AGG | - | chr7_3:76088694-76088713 | Msa1124860:intron | 15.0% |
| !! | GAAAAAAAAATTGTATGATA+GGG | - | chr7_3:76088695-76088714 | Msa1124860:intron | 15.0% |
| !! | TTATTCAAATATATTGTCAT+TGG | - | chr7_3:76088776-76088795 | Msa1124860:intron | 15.0% |
| !!! | ATAATTCAACTTCTTTTTAT+AGG | + | chr7_3:76089315-76089334 | None:intergenic | 15.0% |
| !!! | AGAAAATAGTAATTTTTGTA+AGG | + | chr7_3:76089790-76089809 | None:intergenic | 15.0% |
| !! | AAAAATAGCTAAAAAAACAT+TGG | + | chr7_3:76088341-76088360 | None:intergenic | 15.0% |
| !! | AAAAAAAGAAAAAAGAAAAG+GGG | + | chr7_3:76088451-76088470 | None:intergenic | 15.0% |
| !! | AGAAAAAAAAATTGTATGAT+AGG | - | chr7_3:76088694-76088713 | Msa1124860:intron | 15.0% |
| !! | GAAAAAAAAATTGTATGATA+GGG | - | chr7_3:76088695-76088714 | Msa1124860:intron | 15.0% |
| !! | TTATTCAAATATATTGTCAT+TGG | - | chr7_3:76088776-76088795 | Msa1124860:intron | 15.0% |
| !!! | ATAATTCAACTTCTTTTTAT+AGG | + | chr7_3:76089315-76089334 | None:intergenic | 15.0% |
| !!! | AGAAAATAGTAATTTTTGTA+AGG | + | chr7_3:76089790-76089809 | None:intergenic | 15.0% |
| !!! | ATTTGAAAACTACTCAATTT+TGG | - | chr7_3:76088513-76088532 | Msa1124860:CDS | 20.0% |
| !! | CAAAAAATCCAAAGATAATT+AGG | + | chr7_3:76089164-76089183 | None:intergenic | 20.0% |
| !!! | TATCTTTGGATTTTTTGTAT+AGG | - | chr7_3:76089167-76089186 | Msa1124860:intron | 20.0% |
| !!! | AATTCAACTTTTTTCCTAAT+AGG | - | chr7_3:76089418-76089437 | Msa1124860:intron | 20.0% |
| !! | AATAATACAACTCTAACAAA+TGG | + | chr7_3:76089626-76089645 | None:intergenic | 20.0% |
| !! | TATAATGTAGAATATGTGTA+AGG | + | chr7_3:76089825-76089844 | None:intergenic | 20.0% |
| !!! | TTATGTGCTTTTTTCTATTT+CGG | - | chr7_3:76089883-76089902 | Msa1124860:intron | 20.0% |
| !! | TTGACTTATAATGTAGATTA+GGG | + | chr7_3:76090285-76090304 | None:intergenic | 20.0% |
| !!! | TTTGACTTATAATGTAGATT+AGG | + | chr7_3:76090286-76090305 | None:intergenic | 20.0% |
| !!! | ATTTGAAAACTACTCAATTT+TGG | - | chr7_3:76088513-76088532 | Msa1124860:CDS | 20.0% |
| !! | CAAAAAATCCAAAGATAATT+AGG | + | chr7_3:76089164-76089183 | None:intergenic | 20.0% |
| !!! | TATCTTTGGATTTTTTGTAT+AGG | - | chr7_3:76089167-76089186 | Msa1124860:intron | 20.0% |
| !!! | AATTCAACTTTTTTCCTAAT+AGG | - | chr7_3:76089418-76089437 | Msa1124860:intron | 20.0% |
| !! | AATAATACAACTCTAACAAA+TGG | + | chr7_3:76089626-76089645 | None:intergenic | 20.0% |
| !! | TATAATGTAGAATATGTGTA+AGG | + | chr7_3:76089825-76089844 | None:intergenic | 20.0% |
| !!! | TTATGTGCTTTTTTCTATTT+CGG | - | chr7_3:76089883-76089902 | Msa1124860:intron | 20.0% |
| !! | TTGACTTATAATGTAGATTA+GGG | + | chr7_3:76090285-76090304 | None:intergenic | 20.0% |
| !!! | TTTGACTTATAATGTAGATT+AGG | + | chr7_3:76090286-76090305 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTACCTGAATAAG+GGG | + | chr7_3:76088302-76088321 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTACCTGAATAA+GGG | + | chr7_3:76088303-76088322 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTACCTGAATA+AGG | + | chr7_3:76088304-76088323 | None:intergenic | 25.0% |
| ! | AAAAACATTGGAGTATAAAG+AGG | + | chr7_3:76088329-76088348 | None:intergenic | 25.0% |
| ! | CTCAAGATTTGTAAACTAAA+AGG | + | chr7_3:76088367-76088386 | None:intergenic | 25.0% |
| !! | TGCTTTTCAATTCATATAGA+AGG | - | chr7_3:76088478-76088497 | Msa1124860:CDS | 25.0% |
| ! | AACAATTTATGAGATGCATA+TGG | - | chr7_3:76088631-76088650 | Msa1124860:intron | 25.0% |
| ! | TAAAAATCACATAATGCAAG+AGG | + | chr7_3:76089290-76089309 | None:intergenic | 25.0% |
| !!! | TATGTGCTTTTTTCTATTTC+GGG | - | chr7_3:76089884-76089903 | Msa1124860:intron | 25.0% |
| ! | TACATAAATCAACCATTGTA+GGG | + | chr7_3:76089965-76089984 | None:intergenic | 25.0% |
| ! | GTAGATTAGGGATAATAATT+AGG | + | chr7_3:76090273-76090292 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGTACTAGTAGTT+AGG | - | chr7_3:76090346-76090365 | Msa1124860:CDS | 25.0% |
| ! | TACTAGTAGTTAGGTATTAA+TGG | - | chr7_3:76090355-76090374 | Msa1124860:CDS | 25.0% |
| !!! | TGTTTTTTTACCTGAATAAG+GGG | + | chr7_3:76088302-76088321 | None:intergenic | 25.0% |
| !!! | GTGTTTTTTTACCTGAATAA+GGG | + | chr7_3:76088303-76088322 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTACCTGAATA+AGG | + | chr7_3:76088304-76088323 | None:intergenic | 25.0% |
| ! | AAAAACATTGGAGTATAAAG+AGG | + | chr7_3:76088329-76088348 | None:intergenic | 25.0% |
| ! | CTCAAGATTTGTAAACTAAA+AGG | + | chr7_3:76088367-76088386 | None:intergenic | 25.0% |
| !! | TGCTTTTCAATTCATATAGA+AGG | - | chr7_3:76088478-76088497 | Msa1124860:CDS | 25.0% |
| ! | AACAATTTATGAGATGCATA+TGG | - | chr7_3:76088631-76088650 | Msa1124860:intron | 25.0% |
| ! | TAAAAATCACATAATGCAAG+AGG | + | chr7_3:76089290-76089309 | None:intergenic | 25.0% |
| !!! | TATGTGCTTTTTTCTATTTC+GGG | - | chr7_3:76089884-76089903 | Msa1124860:intron | 25.0% |
| ! | TACATAAATCAACCATTGTA+GGG | + | chr7_3:76089965-76089984 | None:intergenic | 25.0% |
| ! | GTAGATTAGGGATAATAATT+AGG | + | chr7_3:76090273-76090292 | None:intergenic | 25.0% |
| !!! | ATTTTAGTGTACTAGTAGTT+AGG | - | chr7_3:76090346-76090365 | Msa1124860:CDS | 25.0% |
| ! | TACTAGTAGTTAGGTATTAA+TGG | - | chr7_3:76090355-76090374 | Msa1124860:CDS | 25.0% |
| ATAGTTGTAGAAGAAGCTTA+AGG | + | chr7_3:76088272-76088291 | None:intergenic | 30.0% | |
| AAGAAAAGGGGAAATAACTT+GGG | + | chr7_3:76088439-76088458 | None:intergenic | 30.0% | |
| AAAGAAAAGGGGAAATAACT+TGG | + | chr7_3:76088440-76088459 | None:intergenic | 30.0% | |
| CATAAGTGAGTGTCTAATTA+AGG | + | chr7_3:76088542-76088561 | None:intergenic | 30.0% | |
| GAGAAATGGTATGAATATGA+TGG | - | chr7_3:76088738-76088757 | Msa1124860:intron | 30.0% | |
| ATATTGTCATTGGTGTATGT+TGG | - | chr7_3:76088786-76088805 | Msa1124860:intron | 30.0% | |
| TTGGTGTATGTTGGAAAATT+AGG | - | chr7_3:76088795-76088814 | Msa1124860:intron | 30.0% | |
| GTATGTTGGAAAATTAGGAA+TGG | - | chr7_3:76088800-76088819 | Msa1124860:intron | 30.0% | |
| ATGGATGAAATGAACATTGA+TGG | - | chr7_3:76088873-76088892 | Msa1124860:intron | 30.0% | |
| ! | GGTCTAACTTTATTTCTTCT+TGG | + | chr7_3:76088965-76088984 | None:intergenic | 30.0% |
| AAATAAAGTTAGACCCTGAA+AGG | - | chr7_3:76088970-76088989 | Msa1124860:intron | 30.0% | |
| !! | AAGAGGTACCTAATTATCTT+TGG | - | chr7_3:76089153-76089172 | Msa1124860:intron | 30.0% |
| !!! | TTGGATTTTTTGTATAGGCT+AGG | - | chr7_3:76089172-76089191 | Msa1124860:intron | 30.0% |
| CCTCAAACTTGAAATGTAAT+AGG | + | chr7_3:76089507-76089526 | None:intergenic | 30.0% | |
| !! | CCTATTACATTTCAAGTTTG+AGG | - | chr7_3:76089504-76089523 | Msa1124860:CDS | 30.0% |
| !!! | ATGTGCTTTTTTCTATTTCG+GGG | - | chr7_3:76089885-76089904 | Msa1124860:intron | 30.0% |
| CTACATAAATCAACCATTGT+AGG | + | chr7_3:76089966-76089985 | None:intergenic | 30.0% | |
| TGTTGAATGCTACTATTTGT+TGG | + | chr7_3:76090129-76090148 | None:intergenic | 30.0% | |
| GGATAATAATTAGGCAATAC+AGG | + | chr7_3:76090264-76090283 | None:intergenic | 30.0% | |
| AGTTAGGTATTAATGGTTTG+AGG | - | chr7_3:76090362-76090381 | Msa1124860:CDS | 30.0% | |
| ATAGTTGTAGAAGAAGCTTA+AGG | + | chr7_3:76088272-76088291 | None:intergenic | 30.0% | |
| AAGAAAAGGGGAAATAACTT+GGG | + | chr7_3:76088439-76088458 | None:intergenic | 30.0% | |
| AAAGAAAAGGGGAAATAACT+TGG | + | chr7_3:76088440-76088459 | None:intergenic | 30.0% | |
| CATAAGTGAGTGTCTAATTA+AGG | + | chr7_3:76088542-76088561 | None:intergenic | 30.0% | |
| GAGAAATGGTATGAATATGA+TGG | - | chr7_3:76088738-76088757 | Msa1124860:intron | 30.0% | |
| ATATTGTCATTGGTGTATGT+TGG | - | chr7_3:76088786-76088805 | Msa1124860:intron | 30.0% | |
| TTGGTGTATGTTGGAAAATT+AGG | - | chr7_3:76088795-76088814 | Msa1124860:intron | 30.0% | |
| GTATGTTGGAAAATTAGGAA+TGG | - | chr7_3:76088800-76088819 | Msa1124860:intron | 30.0% | |
| ATGGATGAAATGAACATTGA+TGG | - | chr7_3:76088873-76088892 | Msa1124860:intron | 30.0% | |
| ! | GGTCTAACTTTATTTCTTCT+TGG | + | chr7_3:76088965-76088984 | None:intergenic | 30.0% |
| AAATAAAGTTAGACCCTGAA+AGG | - | chr7_3:76088970-76088989 | Msa1124860:intron | 30.0% | |
| !! | AAGAGGTACCTAATTATCTT+TGG | - | chr7_3:76089153-76089172 | Msa1124860:intron | 30.0% |
| !!! | TTGGATTTTTTGTATAGGCT+AGG | - | chr7_3:76089172-76089191 | Msa1124860:intron | 30.0% |
| CCTCAAACTTGAAATGTAAT+AGG | + | chr7_3:76089507-76089526 | None:intergenic | 30.0% | |
| !! | CCTATTACATTTCAAGTTTG+AGG | - | chr7_3:76089504-76089523 | Msa1124860:CDS | 30.0% |
| !!! | ATGTGCTTTTTTCTATTTCG+GGG | - | chr7_3:76089885-76089904 | Msa1124860:intron | 30.0% |
| CTACATAAATCAACCATTGT+AGG | + | chr7_3:76089966-76089985 | None:intergenic | 30.0% | |
| TGTTGAATGCTACTATTTGT+TGG | + | chr7_3:76090129-76090148 | None:intergenic | 30.0% | |
| GGATAATAATTAGGCAATAC+AGG | + | chr7_3:76090264-76090283 | None:intergenic | 30.0% | |
| AGTTAGGTATTAATGGTTTG+AGG | - | chr7_3:76090362-76090381 | Msa1124860:CDS | 30.0% | |
| ! | CTCTCATTCCAATCCATTTT+AGG | + | chr7_3:76088217-76088236 | None:intergenic | 35.0% |
| TATAACAACACCCCTTATTC+AGG | - | chr7_3:76088289-76088308 | Msa1124860:three_prime_UTR | 35.0% | |
| ! | CAATATTCTAGAGAGAGAGA+AGG | + | chr7_3:76088393-76088412 | None:intergenic | 35.0% |
| TAGGGTGTACAAAGAAATGA+AGG | - | chr7_3:76088713-76088732 | Msa1124860:intron | 35.0% | |
| AAGAAATGAAGGCAGAGAAA+TGG | - | chr7_3:76088724-76088743 | Msa1124860:intron | 35.0% | |
| ATGTTCATTTCATCCATAGC+TGG | + | chr7_3:76088870-76088889 | None:intergenic | 35.0% | |
| ! | AAGTAACCAGATTGATTCAC+TGG | - | chr7_3:76088929-76088948 | Msa1124860:intron | 35.0% |
| AAAGCTTCATCTTCCTTTCA+GGG | + | chr7_3:76088986-76089005 | None:intergenic | 35.0% | |
| ! | TTTGGAACCAAACAGCAATT+TGG | + | chr7_3:76089034-76089053 | None:intergenic | 35.0% |
| !! | TTGCTGTTTGGTTCCAAAAT+AGG | - | chr7_3:76089036-76089055 | Msa1124860:intron | 35.0% |
| AGAATTTGATGTTGTCTCCA+AGG | - | chr7_3:76089112-76089131 | Msa1124860:intron | 35.0% | |
| !! | TTGGAGTTTCTGTTTTTCCT+TGG | + | chr7_3:76089132-76089151 | None:intergenic | 35.0% |
| AAAACAGAAACTCCAAGAAG+AGG | - | chr7_3:76089136-76089155 | Msa1124860:intron | 35.0% | |
| GATAATTAGGTACCTCTTCT+TGG | + | chr7_3:76089151-76089170 | None:intergenic | 35.0% | |
| ! | TAATGCAAGAGGTACATGAA+GGG | + | chr7_3:76089279-76089298 | None:intergenic | 35.0% |
| ! | ATAATGCAAGAGGTACATGA+AGG | + | chr7_3:76089280-76089299 | None:intergenic | 35.0% |
| AAATCAGACTTACGCCTATT+AGG | + | chr7_3:76089435-76089454 | None:intergenic | 35.0% | |
| ATAGGTCTCTAAGCTTCTAA+AGG | + | chr7_3:76089489-76089508 | None:intergenic | 35.0% | |
| AACCTAGTATTACCCTACAA+TGG | - | chr7_3:76089950-76089969 | Msa1124860:intron | 35.0% | |
| AACCATTGTAGGGTAATACT+AGG | + | chr7_3:76089955-76089974 | None:intergenic | 35.0% | |
| ACACAGGTTATGAAGTTGAA+GGG | - | chr7_3:76090006-76090025 | Msa1124860:intron | 35.0% | |
| ! | AGCAATCAGGTGGTAATTTT+AGG | - | chr7_3:76090040-76090059 | Msa1124860:intron | 35.0% |
| ! | TTGTTATTGTATCCCTGATC+TGG | + | chr7_3:76090159-76090178 | None:intergenic | 35.0% |
| ! | CTCTCATTCCAATCCATTTT+AGG | + | chr7_3:76088217-76088236 | None:intergenic | 35.0% |
| TATAACAACACCCCTTATTC+AGG | - | chr7_3:76088289-76088308 | Msa1124860:three_prime_UTR | 35.0% | |
| ! | CAATATTCTAGAGAGAGAGA+AGG | + | chr7_3:76088393-76088412 | None:intergenic | 35.0% |
| TAGGGTGTACAAAGAAATGA+AGG | - | chr7_3:76088713-76088732 | Msa1124860:intron | 35.0% | |
| AAGAAATGAAGGCAGAGAAA+TGG | - | chr7_3:76088724-76088743 | Msa1124860:intron | 35.0% | |
| ATGTTCATTTCATCCATAGC+TGG | + | chr7_3:76088870-76088889 | None:intergenic | 35.0% | |
| ! | AAGTAACCAGATTGATTCAC+TGG | - | chr7_3:76088929-76088948 | Msa1124860:intron | 35.0% |
| AAAGCTTCATCTTCCTTTCA+GGG | + | chr7_3:76088986-76089005 | None:intergenic | 35.0% | |
| ! | TTTGGAACCAAACAGCAATT+TGG | + | chr7_3:76089034-76089053 | None:intergenic | 35.0% |
| !! | TTGCTGTTTGGTTCCAAAAT+AGG | - | chr7_3:76089036-76089055 | Msa1124860:intron | 35.0% |
| AGAATTTGATGTTGTCTCCA+AGG | - | chr7_3:76089112-76089131 | Msa1124860:intron | 35.0% | |
| !! | TTGGAGTTTCTGTTTTTCCT+TGG | + | chr7_3:76089132-76089151 | None:intergenic | 35.0% |
| AAAACAGAAACTCCAAGAAG+AGG | - | chr7_3:76089136-76089155 | Msa1124860:intron | 35.0% | |
| GATAATTAGGTACCTCTTCT+TGG | + | chr7_3:76089151-76089170 | None:intergenic | 35.0% | |
| ! | TAATGCAAGAGGTACATGAA+GGG | + | chr7_3:76089279-76089298 | None:intergenic | 35.0% |
| ! | ATAATGCAAGAGGTACATGA+AGG | + | chr7_3:76089280-76089299 | None:intergenic | 35.0% |
| AAATCAGACTTACGCCTATT+AGG | + | chr7_3:76089435-76089454 | None:intergenic | 35.0% | |
| ATAGGTCTCTAAGCTTCTAA+AGG | + | chr7_3:76089489-76089508 | None:intergenic | 35.0% | |
| AACCTAGTATTACCCTACAA+TGG | - | chr7_3:76089950-76089969 | Msa1124860:intron | 35.0% | |
| AACCATTGTAGGGTAATACT+AGG | + | chr7_3:76089955-76089974 | None:intergenic | 35.0% | |
| ACACAGGTTATGAAGTTGAA+GGG | - | chr7_3:76090006-76090025 | Msa1124860:intron | 35.0% | |
| ! | AGCAATCAGGTGGTAATTTT+AGG | - | chr7_3:76090040-76090059 | Msa1124860:intron | 35.0% |
| ! | TTGTTATTGTATCCCTGATC+TGG | + | chr7_3:76090159-76090178 | None:intergenic | 35.0% |
| GAAGAAGCTTAAGGAAGACT+CGG | + | chr7_3:76088263-76088282 | None:intergenic | 40.0% | |
| GAAATGAGTCAACCGTCATT+GGG | - | chr7_3:76088822-76088841 | Msa1124860:intron | 40.0% | |
| ACAAAGGTTACTTCCAGCTA+TGG | - | chr7_3:76088854-76088873 | Msa1124860:intron | 40.0% | |
| TCTTCTCCAGTGAATCAATC+TGG | + | chr7_3:76088938-76088957 | None:intergenic | 40.0% | |
| GAAAGCTTCATCTTCCTTTC+AGG | + | chr7_3:76088987-76089006 | None:intergenic | 40.0% | |
| ATGAAGCTTTCAAGAGAGCT+AGG | - | chr7_3:76088996-76089015 | Msa1124860:intron | 40.0% | |
| TGAAGCTTTCAAGAGAGCTA+GGG | - | chr7_3:76088997-76089016 | Msa1124860:intron | 40.0% | |
| CACACAGGTTATGAAGTTGA+AGG | - | chr7_3:76090005-76090024 | Msa1124860:intron | 40.0% | |
| GGAAAGCTAAAAGAGCAATC+AGG | - | chr7_3:76090027-76090046 | Msa1124860:intron | 40.0% | |
| AAGCTAAAAGAGCAATCAGG+TGG | - | chr7_3:76090030-76090049 | Msa1124860:intron | 40.0% | |
| ! | ACAGTAGAAAGCACATCAGA+AGG | - | chr7_3:76090084-76090103 | Msa1124860:intron | 40.0% |
| GAAGAAGCTTAAGGAAGACT+CGG | + | chr7_3:76088263-76088282 | None:intergenic | 40.0% | |
| GAAATGAGTCAACCGTCATT+GGG | - | chr7_3:76088822-76088841 | Msa1124860:intron | 40.0% | |
| ACAAAGGTTACTTCCAGCTA+TGG | - | chr7_3:76088854-76088873 | Msa1124860:intron | 40.0% | |
| TCTTCTCCAGTGAATCAATC+TGG | + | chr7_3:76088938-76088957 | None:intergenic | 40.0% | |
| GAAAGCTTCATCTTCCTTTC+AGG | + | chr7_3:76088987-76089006 | None:intergenic | 40.0% | |
| ATGAAGCTTTCAAGAGAGCT+AGG | - | chr7_3:76088996-76089015 | Msa1124860:intron | 40.0% | |
| TGAAGCTTTCAAGAGAGCTA+GGG | - | chr7_3:76088997-76089016 | Msa1124860:intron | 40.0% | |
| CACACAGGTTATGAAGTTGA+AGG | - | chr7_3:76090005-76090024 | Msa1124860:intron | 40.0% | |
| GGAAAGCTAAAAGAGCAATC+AGG | - | chr7_3:76090027-76090046 | Msa1124860:intron | 40.0% | |
| AAGCTAAAAGAGCAATCAGG+TGG | - | chr7_3:76090030-76090049 | Msa1124860:intron | 40.0% | |
| ! | ACAGTAGAAAGCACATCAGA+AGG | - | chr7_3:76090084-76090103 | Msa1124860:intron | 40.0% |
| ! | GACTCGGTATGAGGAACAAA+GGG | + | chr7_3:76088247-76088266 | None:intergenic | 45.0% |
| ! | AGACTCGGTATGAGGAACAA+AGG | + | chr7_3:76088248-76088267 | None:intergenic | 45.0% |
| ! | CTTAAGGAAGACTCGGTATG+AGG | + | chr7_3:76088256-76088275 | None:intergenic | 45.0% |
| GGAAATGAGTCAACCGTCAT+TGG | - | chr7_3:76088821-76088840 | Msa1124860:intron | 45.0% | |
| TGTTGTGTCTCACCCAATGA+CGG | + | chr7_3:76088837-76088856 | None:intergenic | 45.0% | |
| CATTGGGTGAGACACAACAA+AGG | - | chr7_3:76088838-76088857 | Msa1124860:intron | 45.0% | |
| AAACAGCAATTTGGCGAGGT+TGG | + | chr7_3:76089025-76089044 | None:intergenic | 45.0% | |
| ! | AACCTCGCCAAATTGCTGTT+TGG | - | chr7_3:76089024-76089043 | Msa1124860:intron | 45.0% |
| AACCAAACAGCAATTTGGCG+AGG | + | chr7_3:76089029-76089048 | None:intergenic | 45.0% | |
| GGTTCCAAAATAGGCGTACA+AGG | - | chr7_3:76089045-76089064 | Msa1124860:intron | 45.0% | |
| TCCAAAATAGGCGTACAAGG+TGG | - | chr7_3:76089048-76089067 | Msa1124860:intron | 45.0% | |
| ! | TCCACCTTGTACGCCTATTT+TGG | + | chr7_3:76089052-76089071 | None:intergenic | 45.0% |
| AAATAGGCGTACAAGGTGGA+AGG | - | chr7_3:76089052-76089071 | Msa1124860:intron | 45.0% | |
| ! | TCAATGTGCTCTGAACACAC+AGG | - | chr7_3:76089990-76090009 | Msa1124860:intron | 45.0% |
| TCAACAAGCTGTTCCAGATC+AGG | - | chr7_3:76090143-76090162 | Msa1124860:intron | 45.0% | |
| CAACAAGCTGTTCCAGATCA+GGG | - | chr7_3:76090144-76090163 | Msa1124860:intron | 45.0% | |
| TGCCTCCTAATCAATGTCAC+TGG | - | chr7_3:76090238-76090257 | Msa1124860:intron | 45.0% | |
| ! | ACAGGCCAGTGACATTGATT+AGG | + | chr7_3:76090246-76090265 | None:intergenic | 45.0% |
| ! | GACTCGGTATGAGGAACAAA+GGG | + | chr7_3:76088247-76088266 | None:intergenic | 45.0% |
| ! | AGACTCGGTATGAGGAACAA+AGG | + | chr7_3:76088248-76088267 | None:intergenic | 45.0% |
| ! | CTTAAGGAAGACTCGGTATG+AGG | + | chr7_3:76088256-76088275 | None:intergenic | 45.0% |
| GGAAATGAGTCAACCGTCAT+TGG | - | chr7_3:76088821-76088840 | Msa1124860:intron | 45.0% | |
| TGTTGTGTCTCACCCAATGA+CGG | + | chr7_3:76088837-76088856 | None:intergenic | 45.0% | |
| CATTGGGTGAGACACAACAA+AGG | - | chr7_3:76088838-76088857 | Msa1124860:intron | 45.0% | |
| AAACAGCAATTTGGCGAGGT+TGG | + | chr7_3:76089025-76089044 | None:intergenic | 45.0% | |
| ! | AACCTCGCCAAATTGCTGTT+TGG | - | chr7_3:76089024-76089043 | Msa1124860:intron | 45.0% |
| AACCAAACAGCAATTTGGCG+AGG | + | chr7_3:76089029-76089048 | None:intergenic | 45.0% | |
| GGTTCCAAAATAGGCGTACA+AGG | - | chr7_3:76089045-76089064 | Msa1124860:intron | 45.0% | |
| TCCAAAATAGGCGTACAAGG+TGG | - | chr7_3:76089048-76089067 | Msa1124860:intron | 45.0% | |
| ! | TCCACCTTGTACGCCTATTT+TGG | + | chr7_3:76089052-76089071 | None:intergenic | 45.0% |
| AAATAGGCGTACAAGGTGGA+AGG | - | chr7_3:76089052-76089071 | Msa1124860:intron | 45.0% | |
| ! | TCAATGTGCTCTGAACACAC+AGG | - | chr7_3:76089990-76090009 | Msa1124860:intron | 45.0% |
| TCAACAAGCTGTTCCAGATC+AGG | - | chr7_3:76090143-76090162 | Msa1124860:intron | 45.0% | |
| CAACAAGCTGTTCCAGATCA+GGG | - | chr7_3:76090144-76090163 | Msa1124860:intron | 45.0% | |
| TGCCTCCTAATCAATGTCAC+TGG | - | chr7_3:76090238-76090257 | Msa1124860:intron | 45.0% | |
| ! | ACAGGCCAGTGACATTGATT+AGG | + | chr7_3:76090246-76090265 | None:intergenic | 45.0% |
| !!! | CAAATTTTTTTTTTTTTTTT+CGG | + | chr7_3:76089354-76089373 | None:intergenic | 5.0% |
| !!! | TATTTATTTTTTTACTTTTT+TGG | + | chr7_3:76089563-76089582 | None:intergenic | 5.0% |
| !!! | CAAATTTTTTTTTTTTTTTT+CGG | + | chr7_3:76089354-76089373 | None:intergenic | 5.0% |
| !!! | TATTTATTTTTTTACTTTTT+TGG | + | chr7_3:76089563-76089582 | None:intergenic | 5.0% |
| ! | GGCCAGTGACATTGATTAGG+AGG | + | chr7_3:76090243-76090262 | None:intergenic | 50.0% |
| ! | GGCCAGTGACATTGATTAGG+AGG | + | chr7_3:76090243-76090262 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 76088208 | 76090409 | 76088208 | ID=Msa1124860;Name=Msa1124860 |
| chr7_3 | mRNA | 76088208 | 76090409 | 76088208 | ID=Msa1124860-mRNA-1;Parent=Msa1124860;Name=Msa1124860-mRNA-1;_AED=0.05;_eAED=0.05;_QI=12|1|1|1|0.5|0.33|3|122|235 |
| chr7_3 | exon | 76088208 | 76088605 | 76088208 | ID=Msa1124860-mRNA-1:exon:20685;Parent=Msa1124860-mRNA-1 |
| chr7_3 | exon | 76089460 | 76089800 | 76089460 | ID=Msa1124860-mRNA-1:exon:20684;Parent=Msa1124860-mRNA-1 |
| chr7_3 | exon | 76090307 | 76090409 | 76090307 | ID=Msa1124860-mRNA-1:exon:20683;Parent=Msa1124860-mRNA-1 |
| chr7_3 | five_prime_UTR | 76090398 | 76090409 | 76090398 | ID=Msa1124860-mRNA-1:five_prime_utr;Parent=Msa1124860-mRNA-1 |
| chr7_3 | CDS | 76090307 | 76090397 | 76090307 | ID=Msa1124860-mRNA-1:cds;Parent=Msa1124860-mRNA-1 |
| chr7_3 | CDS | 76089460 | 76089800 | 76089460 | ID=Msa1124860-mRNA-1:cds;Parent=Msa1124860-mRNA-1 |
| chr7_3 | CDS | 76088330 | 76088605 | 76088330 | ID=Msa1124860-mRNA-1:cds;Parent=Msa1124860-mRNA-1 |
| chr7_3 | three_prime_UTR | 76088208 | 76088329 | 76088208 | ID=Msa1124860-mRNA-1:three_prime_utr;Parent=Msa1124860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
