Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1043600 | sp|Q8VWQ5|WRK50_ARATH | 77.778 | 72 | 16 | 0 | 89 | 160 | 100 | 171 | 1.92e-38 | 132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1043600 | G7I8Z5 | 96.914 | 162 | 5 | 0 | 1 | 162 | 1 | 162 | 3.90e-114 | 329 |
Gene ID | Type | Classification |
---|---|---|
Msa1043600 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005300 | Msa1043600 | 0.904183 | 1.601016e-79 | -8.615850e-47 |
Msa0053750 | Msa1043600 | 0.988585 | 1.338303e-174 | -8.615850e-47 |
Msa0109990 | Msa1043600 | 0.809753 | 1.619144e-50 | -8.615850e-47 |
Msa0148260 | Msa1043600 | 0.933785 | 1.104689e-95 | -8.615850e-47 |
Msa1043600 | Msa1406600 | 0.809723 | 1.643218e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1043600 | MtrunA17_Chr1g0150801 | 96.914 | 162 | 5 | 0 | 1 | 162 | 1 | 162 | 7.51e-118 | 329 |
Msa1043600 | MtrunA17_Chr3g0129321 | 45.882 | 170 | 78 | 4 | 5 | 162 | 11 | 178 | 1.53e-36 | 125 |
Msa1043600 | MtrunA17_Chr8g0383251 | 48.921 | 139 | 63 | 2 | 25 | 158 | 29 | 164 | 8.78e-36 | 122 |
Msa1043600 | MtrunA17_Chr1g0194481 | 57.609 | 92 | 39 | 0 | 69 | 160 | 125 | 216 | 6.68e-32 | 116 |
Msa1043600 | MtrunA17_Chr2g0294231 | 68.421 | 76 | 24 | 0 | 85 | 160 | 186 | 261 | 2.12e-31 | 115 |
Msa1043600 | MtrunA17_Chr7g0270191 | 59.036 | 83 | 34 | 0 | 77 | 159 | 120 | 202 | 2.44e-29 | 108 |
Msa1043600 | MtrunA17_Chr7g0224801 | 63.768 | 69 | 25 | 0 | 91 | 159 | 82 | 150 | 5.27e-29 | 104 |
Msa1043600 | MtrunA17_Chr8g0386241 | 46.078 | 102 | 55 | 0 | 58 | 159 | 59 | 160 | 8.95e-29 | 104 |
Msa1043600 | MtrunA17_Chr4g0051881 | 66.197 | 71 | 24 | 0 | 89 | 159 | 165 | 235 | 2.68e-28 | 107 |
Msa1043600 | MtrunA17_Chr4g0068541 | 66.667 | 72 | 24 | 0 | 89 | 160 | 195 | 266 | 8.08e-28 | 107 |
Msa1043600 | MtrunA17_Chr5g0445311 | 61.842 | 76 | 28 | 1 | 84 | 158 | 345 | 420 | 1.19e-27 | 107 |
Msa1043600 | MtrunA17_Chr5g0445311 | 50.000 | 58 | 28 | 1 | 102 | 159 | 200 | 256 | 6.15e-12 | 62.4 |
Msa1043600 | MtrunA17_Chr3g0106491 | 65.714 | 70 | 24 | 0 | 89 | 158 | 352 | 421 | 1.92e-27 | 106 |
Msa1043600 | MtrunA17_Chr3g0106491 | 47.222 | 72 | 33 | 2 | 92 | 159 | 184 | 254 | 3.34e-16 | 74.7 |
Msa1043600 | MtrunA17_Chr3g0101131 | 60.526 | 76 | 29 | 1 | 84 | 158 | 396 | 471 | 3.20e-27 | 106 |
Msa1043600 | MtrunA17_Chr3g0101131 | 50.000 | 58 | 28 | 1 | 102 | 159 | 243 | 299 | 1.25e-12 | 64.7 |
Msa1043600 | MtrunA17_Chr5g0443131 | 67.143 | 70 | 23 | 0 | 89 | 158 | 144 | 213 | 3.38e-27 | 103 |
Msa1043600 | MtrunA17_Chr5g0418781 | 58.537 | 82 | 34 | 0 | 77 | 158 | 99 | 180 | 3.76e-27 | 102 |
Msa1043600 | MtrunA17_Chr4g0004911 | 60.526 | 76 | 29 | 1 | 84 | 158 | 317 | 392 | 5.06e-27 | 105 |
Msa1043600 | MtrunA17_Chr4g0004911 | 51.724 | 58 | 28 | 0 | 102 | 159 | 184 | 241 | 1.77e-15 | 72.8 |
Msa1043600 | MtrunA17_Chr3g0129361 | 60.274 | 73 | 29 | 0 | 89 | 161 | 131 | 203 | 2.57e-26 | 99.4 |
Msa1043600 | MtrunA17_Chr8g0335811 | 57.143 | 77 | 32 | 1 | 83 | 158 | 134 | 210 | 3.84e-26 | 99.0 |
Msa1043600 | MtrunA17_Chr3g0079691 | 59.211 | 76 | 30 | 1 | 84 | 158 | 476 | 551 | 5.20e-26 | 103 |
Msa1043600 | MtrunA17_Chr3g0079691 | 51.724 | 58 | 27 | 1 | 102 | 159 | 280 | 336 | 2.01e-14 | 69.7 |
Msa1043600 | MtrunA17_Chr5g0432161 | 62.857 | 70 | 26 | 0 | 89 | 158 | 408 | 477 | 6.15e-26 | 102 |
Msa1043600 | MtrunA17_Chr5g0432161 | 55.172 | 58 | 25 | 1 | 102 | 159 | 244 | 300 | 4.11e-15 | 71.6 |
Msa1043600 | MtrunA17_Chr5g0447701 | 53.333 | 90 | 40 | 1 | 69 | 158 | 221 | 308 | 7.79e-26 | 101 |
Msa1043600 | MtrunA17_Chr5g0447701 | 42.623 | 61 | 34 | 1 | 99 | 159 | 89 | 148 | 8.75e-11 | 59.3 |
Msa1043600 | MtrunA17_Chr7g0249311 | 60.000 | 70 | 28 | 0 | 89 | 158 | 379 | 448 | 1.52e-25 | 101 |
Msa1043600 | MtrunA17_Chr7g0249311 | 43.421 | 76 | 36 | 2 | 83 | 158 | 166 | 234 | 1.06e-12 | 64.7 |
Msa1043600 | MtrunA17_Chr7g0248721 | 61.972 | 71 | 26 | 1 | 89 | 159 | 128 | 197 | 1.63e-25 | 97.1 |
Msa1043600 | MtrunA17_Chr8g0383351 | 60.811 | 74 | 28 | 1 | 89 | 161 | 146 | 219 | 1.67e-25 | 97.4 |
Msa1043600 | MtrunA17_Chr7g0249301 | 58.571 | 70 | 29 | 0 | 89 | 158 | 279 | 348 | 1.89e-25 | 100 |
Msa1043600 | MtrunA17_Chr7g0249301 | 44.737 | 76 | 35 | 2 | 83 | 158 | 49 | 117 | 1.88e-12 | 63.9 |
Msa1043600 | MtrunA17_Chr7g0243891 | 57.895 | 76 | 31 | 1 | 84 | 158 | 355 | 430 | 1.14e-24 | 99.0 |
Msa1043600 | MtrunA17_Chr7g0243891 | 53.448 | 58 | 26 | 1 | 102 | 159 | 216 | 272 | 1.02e-14 | 70.5 |
Msa1043600 | MtrunA17_Chr7g0218081 | 55.714 | 70 | 31 | 0 | 89 | 158 | 397 | 466 | 1.35e-24 | 98.6 |
Msa1043600 | MtrunA17_Chr7g0218081 | 54.386 | 57 | 25 | 1 | 102 | 158 | 228 | 283 | 6.99e-14 | 68.2 |
Msa1043600 | MtrunA17_Chr5g0418191 | 55.714 | 70 | 31 | 0 | 89 | 158 | 307 | 376 | 5.04e-24 | 96.7 |
Msa1043600 | MtrunA17_Chr5g0418191 | 54.386 | 57 | 25 | 1 | 102 | 158 | 151 | 206 | 1.77e-13 | 67.0 |
Msa1043600 | MtrunA17_Chr4g0075201 | 52.703 | 74 | 34 | 1 | 87 | 159 | 252 | 325 | 3.12e-23 | 94.7 |
Msa1043600 | MtrunA17_Chr4g0042831 | 52.778 | 72 | 34 | 0 | 87 | 158 | 263 | 334 | 5.75e-23 | 93.2 |
Msa1043600 | MtrunA17_Chr4g0042831 | 50.877 | 57 | 28 | 0 | 102 | 158 | 145 | 201 | 1.00e-13 | 67.4 |
Msa1043600 | MtrunA17_Chr4g0074001 | 52.632 | 76 | 36 | 0 | 83 | 158 | 340 | 415 | 1.87e-22 | 92.8 |
Msa1043600 | MtrunA17_Chr2g0288871 | 42.424 | 99 | 55 | 2 | 63 | 159 | 265 | 363 | 2.53e-22 | 92.4 |
Msa1043600 | MtrunA17_Chr7g0270831 | 51.351 | 74 | 35 | 1 | 87 | 159 | 201 | 274 | 3.16e-22 | 91.7 |
Msa1043600 | MtrunA17_Chr7g0238921 | 64.912 | 57 | 20 | 0 | 102 | 158 | 124 | 180 | 5.88e-22 | 89.7 |
Msa1043600 | MtrunA17_Chr4g0051181 | 51.351 | 74 | 35 | 1 | 87 | 159 | 228 | 301 | 2.38e-21 | 89.4 |
Msa1043600 | MtrunA17_Chr2g0322391 | 50.685 | 73 | 35 | 1 | 87 | 158 | 334 | 406 | 2.94e-21 | 89.4 |
Msa1043600 | MtrunA17_Chr4g0025051 | 42.000 | 100 | 57 | 1 | 61 | 159 | 294 | 393 | 6.85e-21 | 88.2 |
Msa1043600 | MtrunA17_Chr1g0189391 | 52.778 | 72 | 33 | 1 | 88 | 158 | 83 | 154 | 7.80e-21 | 87.0 |
Msa1043600 | MtrunA17_Chr3g0099641 | 49.315 | 73 | 36 | 1 | 87 | 158 | 236 | 308 | 2.20e-20 | 86.7 |
Msa1043600 | MtrunA17_Chr7g0216891 | 51.389 | 72 | 34 | 1 | 89 | 159 | 206 | 277 | 2.96e-20 | 86.7 |
Msa1043600 | MtrunA17_Chr4g0053281 | 46.988 | 83 | 41 | 2 | 77 | 158 | 243 | 323 | 2.55e-19 | 82.8 |
Msa1043600 | MtrunA17_Chr2g0333851 | 51.351 | 74 | 33 | 2 | 89 | 159 | 154 | 227 | 3.19e-19 | 82.4 |
Msa1043600 | MtrunA17_Chr5g0401821 | 50.704 | 71 | 34 | 1 | 89 | 158 | 186 | 256 | 3.52e-19 | 81.6 |
Msa1043600 | MtrunA17_Chr4g0060271 | 49.315 | 73 | 36 | 1 | 87 | 158 | 240 | 312 | 5.65e-19 | 82.8 |
Msa1043600 | MtrunA17_Chr4g0025061 | 41.026 | 117 | 50 | 4 | 62 | 159 | 302 | 418 | 6.40e-19 | 82.8 |
Msa1043600 | MtrunA17_Chr7g0263531 | 46.575 | 73 | 39 | 0 | 86 | 158 | 345 | 417 | 9.60e-19 | 82.0 |
Msa1043600 | MtrunA17_Chr7g0263531 | 53.571 | 56 | 25 | 1 | 103 | 158 | 190 | 244 | 2.83e-13 | 66.2 |
Msa1043600 | MtrunA17_Chr3g0136961 | 52.542 | 59 | 27 | 1 | 101 | 158 | 137 | 195 | 1.11e-18 | 80.5 |
Msa1043600 | MtrunA17_Chr1g0147881 | 46.341 | 82 | 41 | 2 | 78 | 158 | 240 | 319 | 1.43e-18 | 80.9 |
Msa1043600 | MtrunA17_Chr1g0188941 | 52.459 | 61 | 29 | 0 | 98 | 158 | 47 | 107 | 1.55e-18 | 76.3 |
Msa1043600 | MtrunA17_Chr4g0001361 | 52.459 | 61 | 28 | 1 | 100 | 159 | 160 | 220 | 1.80e-18 | 80.5 |
Msa1043600 | MtrunA17_Chr2g0302391 | 49.315 | 73 | 36 | 1 | 87 | 158 | 196 | 268 | 3.18e-18 | 80.5 |
Msa1043600 | MtrunA17_Chr6g0485431 | 45.946 | 74 | 39 | 1 | 86 | 158 | 138 | 211 | 1.20e-17 | 78.6 |
Msa1043600 | MtrunA17_Chr4g0071521 | 43.902 | 82 | 43 | 2 | 78 | 158 | 223 | 302 | 5.52e-17 | 76.3 |
Msa1043600 | MtrunA17_Chr5g0447711 | 41.758 | 91 | 51 | 1 | 68 | 158 | 198 | 286 | 5.56e-17 | 76.3 |
Msa1043600 | MtrunA17_Chr1g0184691 | 45.122 | 82 | 42 | 2 | 78 | 158 | 271 | 350 | 6.20e-17 | 76.6 |
Msa1043600 | MtrunA17_Chr1g0150281 | 50.877 | 57 | 27 | 1 | 103 | 158 | 141 | 197 | 6.73e-17 | 75.5 |
Msa1043600 | MtrunA17_Chr1g0150271 | 48.333 | 60 | 30 | 1 | 100 | 158 | 99 | 158 | 8.85e-17 | 75.1 |
Msa1043600 | MtrunA17_Chr7g0228941 | 44.595 | 74 | 40 | 1 | 88 | 160 | 38 | 111 | 1.07e-16 | 72.0 |
Msa1043600 | MtrunA17_Chr7g0270051 | 55.172 | 58 | 25 | 1 | 103 | 159 | 54 | 111 | 1.92e-16 | 74.3 |
Msa1043600 | MtrunA17_Chr3g0139021 | 41.463 | 82 | 45 | 2 | 78 | 158 | 292 | 371 | 4.10e-16 | 74.3 |
Msa1043600 | MtrunA17_Chr8g0348311 | 54.237 | 59 | 26 | 1 | 103 | 160 | 156 | 214 | 8.50e-16 | 73.2 |
Msa1043600 | MtrunA17_Chr2g0293481 | 35.780 | 109 | 65 | 3 | 56 | 159 | 217 | 325 | 6.22e-15 | 71.2 |
Msa1043600 | MtrunA17_Chr8g0379461 | 52.632 | 57 | 26 | 1 | 103 | 158 | 77 | 133 | 1.31e-14 | 68.9 |
Msa1043600 | MtrunA17_Chr7g0248691 | 38.889 | 90 | 51 | 2 | 72 | 160 | 127 | 213 | 3.52e-14 | 68.6 |
Msa1043600 | MtrunA17_Chr8g0387501 | 50.000 | 60 | 29 | 1 | 101 | 159 | 128 | 187 | 4.00e-14 | 67.8 |
Msa1043600 | MtrunA17_Chr1g0202461 | 52.632 | 57 | 26 | 1 | 103 | 158 | 262 | 318 | 6.40e-14 | 68.2 |
Msa1043600 | MtrunA17_Chr2g0284321 | 40.741 | 81 | 43 | 2 | 83 | 158 | 12 | 92 | 1.79e-13 | 65.5 |
Msa1043600 | MtrunA17_Chr2g0319961 | 50.877 | 57 | 27 | 1 | 103 | 158 | 81 | 137 | 1.91e-13 | 65.9 |
Msa1043600 | MtrunA17_Chr3g0126391 | 39.806 | 103 | 50 | 4 | 64 | 157 | 92 | 191 | 2.94e-13 | 66.2 |
Msa1043600 | MtrunA17_Chr2g0289181 | 45.902 | 61 | 32 | 1 | 99 | 158 | 11 | 71 | 3.42e-13 | 65.1 |
Msa1043600 | MtrunA17_Chr4g0024391 | 42.647 | 68 | 38 | 1 | 87 | 153 | 214 | 281 | 2.41e-12 | 63.5 |
Msa1043600 | MtrunA17_Chr5g0432071 | 49.123 | 57 | 28 | 1 | 102 | 158 | 104 | 159 | 8.15e-12 | 60.8 |
Msa1043600 | MtrunA17_Chr7g0244981 | 32.000 | 125 | 69 | 3 | 38 | 157 | 67 | 180 | 1.82e-11 | 60.8 |
Msa1043600 | MtrunA17_Chr2g0315361 | 42.857 | 70 | 37 | 1 | 95 | 161 | 141 | 210 | 7.99e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1043600 | AT5G26170.1 | 77.778 | 72 | 16 | 0 | 89 | 160 | 100 | 171 | 1.95e-39 | 132 |
Msa1043600 | AT5G64810.1 | 43.871 | 155 | 75 | 4 | 18 | 160 | 14 | 168 | 1.03e-36 | 125 |
Msa1043600 | AT5G49520.1 | 71.831 | 71 | 20 | 0 | 89 | 159 | 208 | 278 | 2.15e-30 | 114 |
Msa1043600 | AT2G47260.1 | 60.714 | 84 | 33 | 0 | 77 | 160 | 149 | 232 | 3.74e-30 | 112 |
Msa1043600 | AT1G29860.1 | 70.423 | 71 | 21 | 0 | 89 | 159 | 123 | 193 | 2.33e-29 | 108 |
Msa1043600 | AT4G18170.1 | 63.636 | 77 | 28 | 0 | 83 | 159 | 153 | 229 | 3.71e-29 | 109 |
Msa1043600 | AT5G13080.1 | 61.111 | 72 | 28 | 0 | 88 | 159 | 53 | 124 | 5.37e-29 | 104 |
Msa1043600 | AT3G01970.1 | 62.857 | 70 | 26 | 0 | 89 | 158 | 52 | 121 | 8.76e-29 | 103 |
Msa1043600 | AT4G26640.5 | 60.526 | 76 | 29 | 1 | 84 | 158 | 186 | 261 | 7.53e-28 | 107 |
Msa1043600 | AT4G26640.5 | 50.000 | 60 | 29 | 1 | 100 | 159 | 33 | 91 | 1.61e-12 | 64.3 |
Msa1043600 | AT4G26640.6 | 60.526 | 76 | 29 | 1 | 84 | 158 | 186 | 261 | 7.53e-28 | 107 |
Msa1043600 | AT4G26640.6 | 50.000 | 60 | 29 | 1 | 100 | 159 | 33 | 91 | 1.61e-12 | 64.3 |
Msa1043600 | AT4G26640.4 | 60.526 | 76 | 29 | 1 | 84 | 158 | 186 | 261 | 7.53e-28 | 107 |
Msa1043600 | AT4G26640.4 | 50.000 | 60 | 29 | 1 | 100 | 159 | 33 | 91 | 1.61e-12 | 64.3 |
Msa1043600 | AT4G26640.3 | 60.526 | 76 | 29 | 1 | 84 | 158 | 186 | 261 | 7.53e-28 | 107 |
Msa1043600 | AT4G26640.3 | 50.000 | 60 | 29 | 1 | 100 | 159 | 33 | 91 | 1.61e-12 | 64.3 |
Msa1043600 | AT3G62340.1 | 63.095 | 84 | 29 | 1 | 76 | 159 | 94 | 175 | 7.59e-28 | 105 |
Msa1043600 | AT4G26640.7 | 60.526 | 76 | 29 | 1 | 84 | 158 | 322 | 397 | 9.56e-28 | 107 |
Msa1043600 | AT4G26640.7 | 50.000 | 60 | 29 | 1 | 100 | 159 | 169 | 227 | 1.21e-12 | 65.1 |
Msa1043600 | AT1G69310.4 | 63.636 | 77 | 27 | 1 | 83 | 158 | 127 | 203 | 1.01e-27 | 104 |
Msa1043600 | AT1G69310.2 | 63.636 | 77 | 27 | 1 | 83 | 158 | 127 | 203 | 1.01e-27 | 104 |
Msa1043600 | AT1G69310.1 | 63.636 | 77 | 27 | 1 | 83 | 158 | 127 | 203 | 1.01e-27 | 104 |
Msa1043600 | AT4G26640.1 | 60.526 | 76 | 29 | 1 | 84 | 158 | 290 | 365 | 1.07e-27 | 107 |
Msa1043600 | AT4G26640.1 | 50.000 | 60 | 29 | 1 | 100 | 159 | 137 | 195 | 1.31e-12 | 64.7 |
Msa1043600 | AT4G26640.2 | 60.526 | 76 | 29 | 1 | 84 | 158 | 362 | 437 | 1.12e-27 | 107 |
Msa1043600 | AT4G26640.2 | 50.000 | 60 | 29 | 1 | 100 | 159 | 209 | 267 | 1.14e-12 | 65.1 |
Msa1043600 | AT2G38470.1 | 60.526 | 76 | 29 | 1 | 84 | 158 | 343 | 418 | 2.16e-27 | 107 |
Msa1043600 | AT2G38470.1 | 51.724 | 58 | 27 | 1 | 102 | 159 | 184 | 240 | 1.99e-14 | 70.1 |
Msa1043600 | AT5G07100.2 | 61.250 | 80 | 28 | 2 | 82 | 158 | 118 | 197 | 3.70e-27 | 101 |
Msa1043600 | AT5G07100.2 | 48.276 | 58 | 30 | 0 | 102 | 159 | 24 | 81 | 2.82e-13 | 65.1 |
Msa1043600 | AT5G07100.4 | 61.250 | 80 | 28 | 2 | 82 | 158 | 118 | 197 | 3.70e-27 | 101 |
Msa1043600 | AT5G07100.4 | 48.276 | 58 | 30 | 0 | 102 | 159 | 24 | 81 | 2.82e-13 | 65.1 |
Msa1043600 | AT5G07100.5 | 61.250 | 80 | 28 | 2 | 82 | 158 | 118 | 197 | 3.70e-27 | 101 |
Msa1043600 | AT5G07100.5 | 48.276 | 58 | 30 | 0 | 102 | 159 | 24 | 81 | 2.82e-13 | 65.1 |
Msa1043600 | AT5G07100.3 | 61.250 | 80 | 28 | 2 | 82 | 158 | 118 | 197 | 3.70e-27 | 101 |
Msa1043600 | AT5G07100.3 | 48.276 | 58 | 30 | 0 | 102 | 159 | 24 | 81 | 2.82e-13 | 65.1 |
Msa1043600 | AT5G07100.1 | 61.250 | 80 | 28 | 2 | 82 | 158 | 211 | 290 | 7.43e-27 | 103 |
Msa1043600 | AT5G07100.1 | 48.276 | 58 | 30 | 0 | 102 | 159 | 117 | 174 | 3.61e-13 | 65.9 |
Msa1043600 | AT4G39410.1 | 49.485 | 97 | 49 | 0 | 65 | 161 | 186 | 282 | 7.75e-27 | 102 |
Msa1043600 | AT5G46350.1 | 63.380 | 71 | 26 | 0 | 89 | 159 | 170 | 240 | 7.90e-27 | 103 |
Msa1043600 | AT2G44745.1 | 58.442 | 77 | 31 | 1 | 83 | 158 | 125 | 201 | 1.24e-26 | 100 |
Msa1043600 | AT2G04880.2 | 61.429 | 70 | 27 | 0 | 89 | 158 | 270 | 339 | 1.42e-26 | 104 |
Msa1043600 | AT2G04880.2 | 45.902 | 61 | 32 | 1 | 99 | 159 | 108 | 167 | 1.32e-11 | 62.0 |
Msa1043600 | AT2G46130.1 | 59.740 | 77 | 31 | 0 | 83 | 159 | 11 | 87 | 1.96e-26 | 96.7 |
Msa1043600 | AT2G04880.1 | 61.429 | 70 | 27 | 0 | 89 | 158 | 294 | 363 | 2.07e-26 | 103 |
Msa1043600 | AT2G04880.1 | 45.902 | 61 | 32 | 1 | 99 | 159 | 108 | 167 | 1.36e-11 | 62.0 |
Msa1043600 | AT1G64000.1 | 58.333 | 72 | 30 | 0 | 88 | 159 | 100 | 171 | 2.31e-26 | 99.0 |
Msa1043600 | AT5G56270.1 | 59.211 | 76 | 30 | 1 | 84 | 158 | 468 | 543 | 4.75e-26 | 103 |
Msa1043600 | AT5G56270.1 | 49.123 | 57 | 28 | 1 | 102 | 158 | 273 | 328 | 5.93e-12 | 63.2 |
Msa1043600 | AT5G41570.1 | 54.217 | 83 | 31 | 1 | 84 | 159 | 73 | 155 | 1.05e-25 | 97.1 |
Msa1043600 | AT4G26440.1 | 41.221 | 131 | 70 | 1 | 28 | 158 | 305 | 428 | 2.70e-25 | 101 |
Msa1043600 | AT4G26440.1 | 34.783 | 115 | 62 | 4 | 45 | 158 | 131 | 233 | 1.34e-12 | 65.1 |
Msa1043600 | AT2G21900.1 | 53.333 | 90 | 30 | 2 | 83 | 160 | 78 | 167 | 5.41e-25 | 95.9 |
Msa1043600 | AT1G13960.2 | 55.714 | 70 | 31 | 0 | 89 | 158 | 243 | 312 | 2.53e-24 | 97.1 |
Msa1043600 | AT1G13960.2 | 56.140 | 57 | 24 | 1 | 102 | 158 | 76 | 131 | 7.50e-15 | 70.9 |
Msa1043600 | AT1G13960.1 | 55.714 | 70 | 31 | 0 | 89 | 158 | 396 | 465 | 3.30e-24 | 98.2 |
Msa1043600 | AT1G13960.1 | 56.140 | 57 | 24 | 1 | 102 | 158 | 229 | 284 | 4.33e-15 | 72.0 |
Msa1043600 | AT3G01080.2 | 55.714 | 70 | 31 | 0 | 89 | 158 | 331 | 400 | 5.66e-24 | 97.1 |
Msa1043600 | AT3G01080.2 | 50.877 | 57 | 27 | 1 | 102 | 158 | 205 | 260 | 7.09e-13 | 65.5 |
Msa1043600 | AT3G01080.1 | 55.714 | 70 | 31 | 0 | 89 | 158 | 293 | 362 | 6.43e-24 | 96.7 |
Msa1043600 | AT3G01080.1 | 50.877 | 57 | 27 | 1 | 102 | 158 | 167 | 222 | 8.00e-13 | 65.5 |
Msa1043600 | AT2G30250.1 | 56.579 | 76 | 32 | 1 | 84 | 158 | 309 | 384 | 1.81e-23 | 95.1 |
Msa1043600 | AT2G30250.1 | 44.828 | 58 | 31 | 1 | 102 | 159 | 166 | 222 | 6.00e-11 | 60.1 |
Msa1043600 | AT2G03340.1 | 54.286 | 70 | 32 | 0 | 89 | 158 | 402 | 471 | 6.02e-23 | 94.4 |
Msa1043600 | AT2G03340.1 | 38.235 | 102 | 58 | 2 | 61 | 158 | 205 | 305 | 7.87e-15 | 71.2 |
Msa1043600 | AT1G69310.3 | 59.740 | 77 | 26 | 2 | 83 | 158 | 127 | 199 | 1.03e-22 | 91.7 |
Msa1043600 | AT4G04450.2 | 52.703 | 74 | 34 | 1 | 87 | 159 | 183 | 256 | 2.41e-22 | 92.4 |
Msa1043600 | AT4G04450.1 | 52.703 | 74 | 34 | 1 | 87 | 159 | 277 | 350 | 6.35e-22 | 91.7 |
Msa1043600 | AT4G22070.4 | 52.703 | 74 | 34 | 1 | 87 | 159 | 282 | 355 | 7.83e-22 | 91.3 |
Msa1043600 | AT4G22070.3 | 52.703 | 74 | 34 | 1 | 87 | 159 | 282 | 355 | 7.83e-22 | 91.3 |
Msa1043600 | AT4G22070.2 | 52.703 | 74 | 34 | 1 | 87 | 159 | 282 | 355 | 7.83e-22 | 91.3 |
Msa1043600 | AT4G22070.1 | 52.703 | 74 | 34 | 1 | 87 | 159 | 282 | 355 | 7.83e-22 | 91.3 |
Msa1043600 | AT1G62300.1 | 52.703 | 74 | 34 | 1 | 87 | 159 | 297 | 370 | 9.14e-22 | 91.3 |
Msa1043600 | AT2G46130.2 | 55.844 | 77 | 30 | 1 | 83 | 159 | 11 | 83 | 1.93e-21 | 84.0 |
Msa1043600 | AT4G30935.1 | 57.377 | 61 | 26 | 0 | 98 | 158 | 327 | 387 | 5.69e-21 | 88.6 |
Msa1043600 | AT1G68150.1 | 51.351 | 74 | 35 | 1 | 87 | 159 | 220 | 293 | 1.01e-20 | 87.4 |
Msa1043600 | AT4G01720.1 | 50.000 | 74 | 36 | 1 | 87 | 159 | 224 | 297 | 2.65e-20 | 87.0 |
Msa1043600 | AT2G23320.1 | 41.000 | 100 | 58 | 1 | 60 | 158 | 198 | 297 | 3.09e-20 | 85.5 |
Msa1043600 | AT5G15130.2 | 49.315 | 73 | 36 | 1 | 87 | 158 | 170 | 242 | 3.25e-20 | 86.7 |
Msa1043600 | AT5G15130.1 | 49.315 | 73 | 36 | 1 | 87 | 158 | 212 | 284 | 3.69e-20 | 86.7 |
Msa1043600 | AT1G80840.1 | 39.815 | 108 | 60 | 3 | 55 | 159 | 99 | 204 | 7.38e-20 | 84.3 |
Msa1043600 | AT2G24570.1 | 43.137 | 102 | 51 | 3 | 62 | 158 | 201 | 300 | 8.79e-20 | 84.3 |
Msa1043600 | AT1G55600.1 | 49.315 | 73 | 37 | 0 | 88 | 160 | 293 | 365 | 1.07e-19 | 85.1 |
Msa1043600 | AT1G18860.1 | 47.297 | 74 | 38 | 1 | 87 | 159 | 224 | 297 | 1.46e-19 | 84.7 |
Msa1043600 | AT4G31550.1 | 45.783 | 83 | 42 | 2 | 77 | 158 | 223 | 303 | 6.81e-19 | 82.0 |
Msa1043600 | AT5G43290.1 | 57.627 | 59 | 25 | 0 | 100 | 158 | 112 | 170 | 1.58e-18 | 80.1 |
Msa1043600 | AT4G24240.1 | 46.341 | 82 | 41 | 2 | 78 | 158 | 259 | 338 | 1.86e-18 | 80.9 |
Msa1043600 | AT4G31550.2 | 45.122 | 82 | 42 | 2 | 78 | 158 | 223 | 302 | 1.94e-18 | 80.9 |
Msa1043600 | AT4G31800.2 | 50.847 | 59 | 28 | 1 | 101 | 158 | 110 | 168 | 4.10e-18 | 78.6 |
Msa1043600 | AT4G31800.1 | 50.847 | 59 | 28 | 1 | 101 | 158 | 175 | 233 | 6.47e-18 | 79.0 |
Msa1043600 | AT3G04670.1 | 43.956 | 91 | 48 | 2 | 69 | 158 | 231 | 319 | 7.24e-18 | 79.3 |
Msa1043600 | AT2G25000.2 | 50.847 | 59 | 28 | 1 | 101 | 158 | 102 | 160 | 7.57e-18 | 77.8 |
Msa1043600 | AT2G25000.4 | 50.847 | 59 | 28 | 1 | 101 | 158 | 102 | 160 | 7.57e-18 | 77.8 |
Msa1043600 | AT5G28650.1 | 47.561 | 82 | 40 | 2 | 78 | 158 | 240 | 319 | 1.14e-17 | 78.6 |
Msa1043600 | AT2G25000.3 | 50.847 | 59 | 28 | 1 | 101 | 158 | 124 | 182 | 1.74e-17 | 77.0 |
Msa1043600 | AT2G25000.1 | 50.847 | 59 | 28 | 1 | 101 | 158 | 145 | 203 | 2.10e-17 | 77.4 |
Msa1043600 | AT2G30590.1 | 48.611 | 72 | 36 | 1 | 89 | 159 | 300 | 371 | 5.54e-17 | 77.0 |
Msa1043600 | AT1G69810.2 | 41.053 | 95 | 54 | 2 | 67 | 159 | 110 | 204 | 1.28e-16 | 75.9 |
Msa1043600 | AT1G69810.1 | 41.053 | 95 | 54 | 2 | 67 | 159 | 168 | 262 | 2.10e-16 | 75.5 |
Msa1043600 | AT2G37260.3 | 40.385 | 104 | 59 | 2 | 58 | 158 | 222 | 325 | 2.33e-16 | 75.1 |
Msa1043600 | AT2G37260.3 | 53.571 | 56 | 25 | 1 | 103 | 158 | 86 | 140 | 2.32e-12 | 63.9 |
Msa1043600 | AT2G37260.2 | 40.385 | 104 | 59 | 2 | 58 | 158 | 220 | 323 | 2.40e-16 | 75.1 |
Msa1043600 | AT2G37260.2 | 53.571 | 56 | 25 | 1 | 103 | 158 | 84 | 138 | 2.42e-12 | 63.9 |
Msa1043600 | AT2G37260.1 | 40.385 | 104 | 59 | 2 | 58 | 158 | 302 | 405 | 2.99e-16 | 75.1 |
Msa1043600 | AT2G37260.1 | 53.571 | 56 | 25 | 1 | 103 | 158 | 166 | 220 | 1.86e-12 | 64.3 |
Msa1043600 | AT5G52830.1 | 58.621 | 58 | 23 | 1 | 103 | 159 | 166 | 223 | 4.34e-16 | 74.3 |
Msa1043600 | AT1G29280.1 | 51.724 | 58 | 27 | 1 | 103 | 159 | 75 | 132 | 5.54e-16 | 73.2 |
Msa1043600 | AT2G34830.2 | 36.290 | 124 | 70 | 4 | 41 | 159 | 163 | 282 | 7.58e-15 | 71.2 |
Msa1043600 | AT2G34830.1 | 36.290 | 124 | 70 | 4 | 41 | 159 | 154 | 273 | 7.63e-15 | 71.2 |
Msa1043600 | AT3G58710.2 | 53.448 | 58 | 26 | 1 | 103 | 159 | 71 | 128 | 2.34e-14 | 68.9 |
Msa1043600 | AT3G58710.1 | 53.448 | 58 | 26 | 1 | 103 | 159 | 72 | 129 | 2.46e-14 | 68.9 |
Msa1043600 | AT4G01250.1 | 50.847 | 59 | 28 | 1 | 103 | 160 | 129 | 187 | 2.49e-14 | 69.3 |
Msa1043600 | AT1G30650.1 | 38.144 | 97 | 55 | 3 | 68 | 159 | 179 | 275 | 3.06e-14 | 69.7 |
Msa1043600 | AT5G45050.1 | 36.449 | 107 | 55 | 3 | 60 | 159 | 1138 | 1238 | 1.11e-13 | 68.2 |
Msa1043600 | AT5G45050.4 | 36.449 | 107 | 55 | 3 | 60 | 159 | 999 | 1099 | 1.11e-13 | 68.2 |
Msa1043600 | AT5G45050.2 | 36.449 | 107 | 55 | 3 | 60 | 159 | 1110 | 1210 | 1.11e-13 | 68.2 |
Msa1043600 | AT3G01080.3 | 50.877 | 57 | 27 | 1 | 102 | 158 | 205 | 260 | 3.63e-13 | 66.2 |
Msa1043600 | AT4G23550.1 | 36.957 | 92 | 52 | 2 | 68 | 158 | 111 | 197 | 1.87e-12 | 63.9 |
Msa1043600 | AT2G40740.1 | 38.554 | 83 | 48 | 1 | 78 | 157 | 149 | 231 | 4.92e-11 | 60.1 |
Msa1043600 | AT2G40740.3 | 38.554 | 83 | 48 | 1 | 78 | 157 | 158 | 240 | 5.95e-11 | 59.7 |
Msa1043600 | AT2G46400.1 | 35.556 | 90 | 49 | 2 | 77 | 157 | 73 | 162 | 7.47e-11 | 59.3 |
Find 44 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTACAATTTACCTTAAAA+AGG | 0.152863 | 7_2:+1805987 | Msa1043600:three_prime_UTR |
CAATATATATACCTTGGATT+AGG | 0.247704 | 7_2:-1805654 | None:intergenic |
ACCTCTGCTTTCTGCAAGTT+AGG | 0.255682 | 7_2:+1806107 | Msa1043600:three_prime_UTR |
GATGATGAATTTGCTGTTCT+TGG | 0.294438 | 7_2:-1805179 | None:intergenic |
TGGTTGCTAAAATCACTTTC+AGG | 0.298136 | 7_2:-1805203 | None:intergenic |
AATATATATACCTTGGATTA+GGG | 0.308746 | 7_2:-1805653 | None:intergenic |
GGGTACAGATGGAGGAAGTA+TGG | 0.355517 | 7_2:+1805609 | Msa1043600:CDS |
TAATTGGAAGAAGGAAATTA+AGG | 0.361306 | 7_2:+1805539 | Msa1043600:CDS |
ATATGAGTAGAAACGATAAT+TGG | 0.361702 | 7_2:+1805523 | Msa1043600:CDS |
GTGATTGCAGGAATTATTAT+AGG | 0.370210 | 7_2:+1805748 | Msa1043600:intron |
GAGGAAGTATGGAAAGAAAA+TGG | 0.372428 | 7_2:+1805620 | Msa1043600:CDS |
CCTCTGCTTTCTGCAAGTTA+GGG | 0.400644 | 7_2:+1806108 | Msa1043600:three_prime_UTR |
GTGGGTGTGCATGCCCTCAT+AGG | 0.406915 | 7_2:-1805844 | None:intergenic |
TCTATATAACTGAATCTAGA+TGG | 0.411414 | 7_2:-1806137 | None:intergenic |
GTTGAAAACTCAAACTTGTT+GGG | 0.426445 | 7_2:-1805959 | None:intergenic |
TGTTTGAGCTAGCAAGAACT+TGG | 0.437457 | 7_2:-1805867 | None:intergenic |
TGTATAACCATTTGCTGACT+AGG | 0.443978 | 7_2:-1806051 | None:intergenic |
AGTTGAAAACTCAAACTTGT+TGG | 0.477960 | 7_2:-1805960 | None:intergenic |
TATTATAGGTGTTCAGTTGA+GGG | 0.484385 | 7_2:+1805762 | Msa1043600:CDS |
TGAGTTTCGATGACAATGAA+TGG | 0.486049 | 7_2:+1805255 | Msa1043600:CDS |
TTTCAAGCCAACGAAGTAGC+AGG | 0.492097 | 7_2:+1805311 | Msa1043600:CDS |
GAATTTGAATACTTTCATGT+AGG | 0.502390 | 7_2:-1805937 | None:intergenic |
AAGTAGTCAGAGAGTTCAAA+TGG | 0.505113 | 7_2:-1805233 | None:intergenic |
TGCAAAGCCTAGTCAGCAAA+TGG | 0.505838 | 7_2:+1806044 | Msa1043600:three_prime_UTR |
GCTGCCACCTGCTACTTCGT+TGG | 0.513271 | 7_2:-1805318 | None:intergenic |
GCAGGTGGCAGCTACATTGA+AGG | 0.517291 | 7_2:+1805329 | Msa1043600:CDS |
AAAACTAAAGACTCAGTGGT+TGG | 0.518786 | 7_2:-1805290 | None:intergenic |
TAGAAACGATAATTGGAAGA+AGG | 0.519711 | 7_2:+1805530 | Msa1043600:CDS |
AGAGTTCAAATGGCCACTGC+TGG | 0.523946 | 7_2:-1805223 | None:intergenic |
TTATTATAGGTGTTCAGTTG+AGG | 0.524859 | 7_2:+1805761 | Msa1043600:CDS |
TTATGTGATAACAACCTATG+AGG | 0.527879 | 7_2:+1805830 | Msa1043600:CDS |
CTGATTGAAATACTTGATGA+TGG | 0.529008 | 7_2:+1805588 | Msa1043600:CDS |
TACTTGATGATGGGTACAGA+TGG | 0.541635 | 7_2:+1805598 | Msa1043600:CDS |
GAGCTAGCAAGAACTTGGGT+GGG | 0.555150 | 7_2:-1805862 | None:intergenic |
ATTATAGGTGTTCAGTTGAG+GGG | 0.580189 | 7_2:+1805763 | Msa1043600:CDS |
CAGGTGGCAGCTACATTGAA+GGG | 0.604012 | 7_2:+1805330 | Msa1043600:CDS |
TATGTGATAACAACCTATGA+GGG | 0.610093 | 7_2:+1805831 | Msa1043600:CDS |
TGAGCTAGCAAGAACTTGGG+TGG | 0.613536 | 7_2:-1805863 | None:intergenic |
TGATTGAAATACTTGATGAT+GGG | 0.620660 | 7_2:+1805589 | Msa1043600:CDS |
GTTTGAGCTAGCAAGAACTT+GGG | 0.621628 | 7_2:-1805866 | None:intergenic |
CCCTAACTTGCAGAAAGCAG+AGG | 0.631582 | 7_2:-1806108 | None:intergenic |
TTGATGATGGGTACAGATGG+AGG | 0.631832 | 7_2:+1805601 | Msa1043600:CDS |
TTAAGAACAGCCCTAATCCA+AGG | 0.633554 | 7_2:+1805643 | Msa1043600:CDS |
CAAGCCAACGAAGTAGCAGG+TGG | 0.667226 | 7_2:+1805314 | Msa1043600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATGTAATAAATTAATTTCA+TGG | - | chr7_2:1805685-1805704 | None:intergenic | 10.0% |
!! | TATGTAATAAATTAATTTCA+TGG | - | chr7_2:1805685-1805704 | None:intergenic | 10.0% |
!!! | TGTCTTTAACTTATAATTAT+TGG | + | chr7_2:1805460-1805479 | Msa1043600:intron | 15.0% |
!!! | TATATCTTATTCTGATTTTA+AGG | - | chr7_2:1806165-1806184 | None:intergenic | 15.0% |
!!! | TGTCTTTAACTTATAATTAT+TGG | + | chr7_2:1805460-1805479 | Msa1043600:intron | 15.0% |
!!! | TATATCTTATTCTGATTTTA+AGG | - | chr7_2:1806165-1806184 | None:intergenic | 15.0% |
!! | AATATATATACCTTGGATTA+GGG | - | chr7_2:1805656-1805675 | None:intergenic | 20.0% |
!! | ATGTACAATTTACCTTAAAA+AGG | + | chr7_2:1805987-1806006 | Msa1043600:three_prime_UTR | 20.0% |
!! | TGTACAATTTACCTTAAAAA+GGG | + | chr7_2:1805988-1806007 | Msa1043600:three_prime_UTR | 20.0% |
!! | AATATATATACCTTGGATTA+GGG | - | chr7_2:1805656-1805675 | None:intergenic | 20.0% |
!! | ATGTACAATTTACCTTAAAA+AGG | + | chr7_2:1805987-1806006 | Msa1043600:three_prime_UTR | 20.0% |
!! | TGTACAATTTACCTTAAAAA+GGG | + | chr7_2:1805988-1806007 | Msa1043600:three_prime_UTR | 20.0% |
!! | TAAGCCAATTTTTATCTTAC+CGG | + | chr7_2:1805370-1805389 | Msa1043600:intron | 25.0% |
! | ATATGAGTAGAAACGATAAT+TGG | + | chr7_2:1805523-1805542 | Msa1043600:CDS | 25.0% |
! | TAATTGGAAGAAGGAAATTA+AGG | + | chr7_2:1805539-1805558 | Msa1043600:CDS | 25.0% |
!! | TGATTGAAATACTTGATGAT+GGG | + | chr7_2:1805589-1805608 | Msa1043600:CDS | 25.0% |
! | CAATATATATACCTTGGATT+AGG | - | chr7_2:1805657-1805676 | None:intergenic | 25.0% |
! | CTAATCCAAGGTATATATAT+TGG | + | chr7_2:1805655-1805674 | Msa1043600:intron | 25.0% |
! | GTATTCCAATATATATACCT+TGG | - | chr7_2:1805663-1805682 | None:intergenic | 25.0% |
! | GAATTTGAATACTTTCATGT+AGG | - | chr7_2:1805940-1805959 | None:intergenic | 25.0% |
!! | AAAGTTCAAAACCCTTTTTA+AGG | - | chr7_2:1806002-1806021 | None:intergenic | 25.0% |
! | TCTATATAACTGAATCTAGA+TGG | - | chr7_2:1806140-1806159 | None:intergenic | 25.0% |
!! | TAAGCCAATTTTTATCTTAC+CGG | + | chr7_2:1805370-1805389 | Msa1043600:intron | 25.0% |
! | ATATGAGTAGAAACGATAAT+TGG | + | chr7_2:1805523-1805542 | Msa1043600:CDS | 25.0% |
! | TAATTGGAAGAAGGAAATTA+AGG | + | chr7_2:1805539-1805558 | Msa1043600:CDS | 25.0% |
!! | TGATTGAAATACTTGATGAT+GGG | + | chr7_2:1805589-1805608 | Msa1043600:CDS | 25.0% |
! | CAATATATATACCTTGGATT+AGG | - | chr7_2:1805657-1805676 | None:intergenic | 25.0% |
! | CTAATCCAAGGTATATATAT+TGG | + | chr7_2:1805655-1805674 | Msa1043600:intron | 25.0% |
! | GTATTCCAATATATATACCT+TGG | - | chr7_2:1805663-1805682 | None:intergenic | 25.0% |
! | GAATTTGAATACTTTCATGT+AGG | - | chr7_2:1805940-1805959 | None:intergenic | 25.0% |
!! | AAAGTTCAAAACCCTTTTTA+AGG | - | chr7_2:1806002-1806021 | None:intergenic | 25.0% |
! | TCTATATAACTGAATCTAGA+TGG | - | chr7_2:1806140-1806159 | None:intergenic | 25.0% |
TTGAAAAACTAAAGACTCAG+TGG | - | chr7_2:1805297-1805316 | None:intergenic | 30.0% | |
AAGACCGGTAAGATAAAAAT+TGG | - | chr7_2:1805377-1805396 | None:intergenic | 30.0% | |
! | TGTTACTGTTGTCATGTTTT+AGG | + | chr7_2:1805483-1805502 | Msa1043600:intron | 30.0% |
TAGAAACGATAATTGGAAGA+AGG | + | chr7_2:1805530-1805549 | Msa1043600:CDS | 30.0% | |
CTGATTGAAATACTTGATGA+TGG | + | chr7_2:1805588-1805607 | Msa1043600:CDS | 30.0% | |
ATATGTATATGTGTGATTGC+AGG | + | chr7_2:1805736-1805755 | Msa1043600:intron | 30.0% | |
GTGATTGCAGGAATTATTAT+AGG | + | chr7_2:1805748-1805767 | Msa1043600:intron | 30.0% | |
TTATTATAGGTGTTCAGTTG+AGG | + | chr7_2:1805761-1805780 | Msa1043600:CDS | 30.0% | |
TATTATAGGTGTTCAGTTGA+GGG | + | chr7_2:1805762-1805781 | Msa1043600:CDS | 30.0% | |
!!! | CTCTCAACTCTTTTTTTTAC+AGG | - | chr7_2:1805792-1805811 | None:intergenic | 30.0% |
TTATGTGATAACAACCTATG+AGG | + | chr7_2:1805830-1805849 | Msa1043600:CDS | 30.0% | |
TATGTGATAACAACCTATGA+GGG | + | chr7_2:1805831-1805850 | Msa1043600:CDS | 30.0% | |
! | GTTGAAAACTCAAACTTGTT+GGG | - | chr7_2:1805962-1805981 | None:intergenic | 30.0% |
AGTTGAAAACTCAAACTTGT+TGG | - | chr7_2:1805963-1805982 | None:intergenic | 30.0% | |
!! | TGGATTTTTCTCTGTCATTT+TGG | - | chr7_2:1805162-1805181 | None:intergenic | 30.0% |
TTGAAAAACTAAAGACTCAG+TGG | - | chr7_2:1805297-1805316 | None:intergenic | 30.0% | |
AAGACCGGTAAGATAAAAAT+TGG | - | chr7_2:1805377-1805396 | None:intergenic | 30.0% | |
! | TGTTACTGTTGTCATGTTTT+AGG | + | chr7_2:1805483-1805502 | Msa1043600:intron | 30.0% |
TAGAAACGATAATTGGAAGA+AGG | + | chr7_2:1805530-1805549 | Msa1043600:CDS | 30.0% | |
CTGATTGAAATACTTGATGA+TGG | + | chr7_2:1805588-1805607 | Msa1043600:CDS | 30.0% | |
ATATGTATATGTGTGATTGC+AGG | + | chr7_2:1805736-1805755 | Msa1043600:intron | 30.0% | |
GTGATTGCAGGAATTATTAT+AGG | + | chr7_2:1805748-1805767 | Msa1043600:intron | 30.0% | |
TTATTATAGGTGTTCAGTTG+AGG | + | chr7_2:1805761-1805780 | Msa1043600:CDS | 30.0% | |
TATTATAGGTGTTCAGTTGA+GGG | + | chr7_2:1805762-1805781 | Msa1043600:CDS | 30.0% | |
!!! | CTCTCAACTCTTTTTTTTAC+AGG | - | chr7_2:1805792-1805811 | None:intergenic | 30.0% |
TTATGTGATAACAACCTATG+AGG | + | chr7_2:1805830-1805849 | Msa1043600:CDS | 30.0% | |
TATGTGATAACAACCTATGA+GGG | + | chr7_2:1805831-1805850 | Msa1043600:CDS | 30.0% | |
! | GTTGAAAACTCAAACTTGTT+GGG | - | chr7_2:1805962-1805981 | None:intergenic | 30.0% |
AGTTGAAAACTCAAACTTGT+TGG | - | chr7_2:1805963-1805982 | None:intergenic | 30.0% | |
!! | GATGATGAATTTGCTGTTCT+TGG | - | chr7_2:1805182-1805201 | None:intergenic | 35.0% |
TGGTTGCTAAAATCACTTTC+AGG | - | chr7_2:1805206-1805225 | None:intergenic | 35.0% | |
AAGTAGTCAGAGAGTTCAAA+TGG | - | chr7_2:1805236-1805255 | None:intergenic | 35.0% | |
TGAGTTTCGATGACAATGAA+TGG | + | chr7_2:1805255-1805274 | Msa1043600:CDS | 35.0% | |
AAAACTAAAGACTCAGTGGT+TGG | - | chr7_2:1805293-1805312 | None:intergenic | 35.0% | |
! | GAGGAAGTATGGAAAGAAAA+TGG | + | chr7_2:1805620-1805639 | Msa1043600:CDS | 35.0% |
ATTATAGGTGTTCAGTTGAG+GGG | + | chr7_2:1805763-1805782 | Msa1043600:CDS | 35.0% | |
! | TGTATAACCATTTGCTGACT+AGG | - | chr7_2:1806054-1806073 | None:intergenic | 35.0% |
!! | GATGATGAATTTGCTGTTCT+TGG | - | chr7_2:1805182-1805201 | None:intergenic | 35.0% |
TGGTTGCTAAAATCACTTTC+AGG | - | chr7_2:1805206-1805225 | None:intergenic | 35.0% | |
AAGTAGTCAGAGAGTTCAAA+TGG | - | chr7_2:1805236-1805255 | None:intergenic | 35.0% | |
TGAGTTTCGATGACAATGAA+TGG | + | chr7_2:1805255-1805274 | Msa1043600:CDS | 35.0% | |
AAAACTAAAGACTCAGTGGT+TGG | - | chr7_2:1805293-1805312 | None:intergenic | 35.0% | |
! | GAGGAAGTATGGAAAGAAAA+TGG | + | chr7_2:1805620-1805639 | Msa1043600:CDS | 35.0% |
ATTATAGGTGTTCAGTTGAG+GGG | + | chr7_2:1805763-1805782 | Msa1043600:CDS | 35.0% | |
! | TGTATAACCATTTGCTGACT+AGG | - | chr7_2:1806054-1806073 | None:intergenic | 35.0% |
!! | TACTTGATGATGGGTACAGA+TGG | + | chr7_2:1805598-1805617 | Msa1043600:CDS | 40.0% |
TTAAGAACAGCCCTAATCCA+AGG | + | chr7_2:1805643-1805662 | Msa1043600:CDS | 40.0% | |
GTTTGAGCTAGCAAGAACTT+GGG | - | chr7_2:1805869-1805888 | None:intergenic | 40.0% | |
TGTTTGAGCTAGCAAGAACT+TGG | - | chr7_2:1805870-1805889 | None:intergenic | 40.0% | |
!! | TACTTGATGATGGGTACAGA+TGG | + | chr7_2:1805598-1805617 | Msa1043600:CDS | 40.0% |
TTAAGAACAGCCCTAATCCA+AGG | + | chr7_2:1805643-1805662 | Msa1043600:CDS | 40.0% | |
GTTTGAGCTAGCAAGAACTT+GGG | - | chr7_2:1805869-1805888 | None:intergenic | 40.0% | |
TGTTTGAGCTAGCAAGAACT+TGG | - | chr7_2:1805870-1805889 | None:intergenic | 40.0% | |
!! | GTGATTTTAGCAACCAGCAG+TGG | + | chr7_2:1805210-1805229 | Msa1043600:CDS | 45.0% |
TTTCAAGCCAACGAAGTAGC+AGG | + | chr7_2:1805311-1805330 | Msa1043600:CDS | 45.0% | |
TGCACAAGACGAACAAAGAC+CGG | - | chr7_2:1805392-1805411 | None:intergenic | 45.0% | |
!! | TTGATGATGGGTACAGATGG+AGG | + | chr7_2:1805601-1805620 | Msa1043600:CDS | 45.0% |
TGCAAAGCCTAGTCAGCAAA+TGG | + | chr7_2:1806044-1806063 | Msa1043600:three_prime_UTR | 45.0% | |
ACCTCTGCTTTCTGCAAGTT+AGG | + | chr7_2:1806107-1806126 | Msa1043600:three_prime_UTR | 45.0% | |
CCTCTGCTTTCTGCAAGTTA+GGG | + | chr7_2:1806108-1806127 | Msa1043600:three_prime_UTR | 45.0% | |
!! | GTGATTTTAGCAACCAGCAG+TGG | + | chr7_2:1805210-1805229 | Msa1043600:CDS | 45.0% |
TTTCAAGCCAACGAAGTAGC+AGG | + | chr7_2:1805311-1805330 | Msa1043600:CDS | 45.0% | |
TGCACAAGACGAACAAAGAC+CGG | - | chr7_2:1805392-1805411 | None:intergenic | 45.0% | |
!! | TTGATGATGGGTACAGATGG+AGG | + | chr7_2:1805601-1805620 | Msa1043600:CDS | 45.0% |
TGCAAAGCCTAGTCAGCAAA+TGG | + | chr7_2:1806044-1806063 | Msa1043600:three_prime_UTR | 45.0% | |
ACCTCTGCTTTCTGCAAGTT+AGG | + | chr7_2:1806107-1806126 | Msa1043600:three_prime_UTR | 45.0% | |
CCTCTGCTTTCTGCAAGTTA+GGG | + | chr7_2:1806108-1806127 | Msa1043600:three_prime_UTR | 45.0% | |
!!! | ATATACATAATTTTTTTAAA+CGG | - | chr7_2:1805440-1805459 | None:intergenic | 5.0% |
!!! | ATATACATAATTTTTTTAAA+CGG | - | chr7_2:1805440-1805459 | None:intergenic | 5.0% |
AGAGTTCAAATGGCCACTGC+TGG | - | chr7_2:1805226-1805245 | None:intergenic | 50.0% | |
CAGGTGGCAGCTACATTGAA+GGG | + | chr7_2:1805330-1805349 | Msa1043600:CDS | 50.0% | |
GGGTACAGATGGAGGAAGTA+TGG | + | chr7_2:1805609-1805628 | Msa1043600:CDS | 50.0% | |
GAGCTAGCAAGAACTTGGGT+GGG | - | chr7_2:1805865-1805884 | None:intergenic | 50.0% | |
TGAGCTAGCAAGAACTTGGG+TGG | - | chr7_2:1805866-1805885 | None:intergenic | 50.0% | |
! | CCCTAACTTGCAGAAAGCAG+AGG | - | chr7_2:1806111-1806130 | None:intergenic | 50.0% |
AGAGTTCAAATGGCCACTGC+TGG | - | chr7_2:1805226-1805245 | None:intergenic | 50.0% | |
CAGGTGGCAGCTACATTGAA+GGG | + | chr7_2:1805330-1805349 | Msa1043600:CDS | 50.0% | |
GGGTACAGATGGAGGAAGTA+TGG | + | chr7_2:1805609-1805628 | Msa1043600:CDS | 50.0% | |
GAGCTAGCAAGAACTTGGGT+GGG | - | chr7_2:1805865-1805884 | None:intergenic | 50.0% | |
TGAGCTAGCAAGAACTTGGG+TGG | - | chr7_2:1805866-1805885 | None:intergenic | 50.0% | |
! | CCCTAACTTGCAGAAAGCAG+AGG | - | chr7_2:1806111-1806130 | None:intergenic | 50.0% |
CAAGCCAACGAAGTAGCAGG+TGG | + | chr7_2:1805314-1805333 | Msa1043600:CDS | 55.0% | |
GCAGGTGGCAGCTACATTGA+AGG | + | chr7_2:1805329-1805348 | Msa1043600:CDS | 55.0% | |
CAAGCCAACGAAGTAGCAGG+TGG | + | chr7_2:1805314-1805333 | Msa1043600:CDS | 55.0% | |
GCAGGTGGCAGCTACATTGA+AGG | + | chr7_2:1805329-1805348 | Msa1043600:CDS | 55.0% | |
! | GCTGCCACCTGCTACTTCGT+TGG | - | chr7_2:1805321-1805340 | None:intergenic | 60.0% |
GTGGGTGTGCATGCCCTCAT+AGG | - | chr7_2:1805847-1805866 | None:intergenic | 60.0% | |
! | GCTGCCACCTGCTACTTCGT+TGG | - | chr7_2:1805321-1805340 | None:intergenic | 60.0% |
GTGGGTGTGCATGCCCTCAT+AGG | - | chr7_2:1805847-1805866 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 1805160 | 1806198 | 1805160 | ID=Msa1043600;Name=Msa1043600 |
chr7_2 | mRNA | 1805160 | 1806198 | 1805160 | ID=Msa1043600-mRNA-1;Parent=Msa1043600;Name=Msa1043600-mRNA-1;_AED=0.05;_eAED=0.05;_QI=4|1|1|1|1|1|3|317|162 |
chr7_2 | exon | 1805160 | 1805368 | 1805160 | ID=Msa1043600-mRNA-1:exon:352;Parent=Msa1043600-mRNA-1 |
chr7_2 | exon | 1805505 | 1805664 | 1805505 | ID=Msa1043600-mRNA-1:exon:353;Parent=Msa1043600-mRNA-1 |
chr7_2 | exon | 1805758 | 1806198 | 1805758 | ID=Msa1043600-mRNA-1:exon:354;Parent=Msa1043600-mRNA-1 |
chr7_2 | five_prime_UTR | 1805160 | 1805163 | 1805160 | ID=Msa1043600-mRNA-1:five_prime_utr;Parent=Msa1043600-mRNA-1 |
chr7_2 | CDS | 1805164 | 1805368 | 1805164 | ID=Msa1043600-mRNA-1:cds;Parent=Msa1043600-mRNA-1 |
chr7_2 | CDS | 1805505 | 1805664 | 1805505 | ID=Msa1043600-mRNA-1:cds;Parent=Msa1043600-mRNA-1 |
chr7_2 | CDS | 1805758 | 1805881 | 1805758 | ID=Msa1043600-mRNA-1:cds;Parent=Msa1043600-mRNA-1 |
chr7_2 | three_prime_UTR | 1805882 | 1806198 | 1805882 | ID=Msa1043600-mRNA-1:three_prime_utr;Parent=Msa1043600-mRNA-1 |
Gene Sequence |
Protein sequence |