AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1049050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049050 MtrunA17_Chr7g0217881 93.562 466 30 0 1 466 1 466 0.0 879
Msa1049050 MtrunA17_Chr6g0453951 74.639 485 104 2 1 466 47 531 0.0 765
Msa1049050 MtrunA17_Chr6g0454401 76.240 484 96 2 1 465 1 484 0.0 759
Msa1049050 MtrunA17_Chr6g0454361 75.052 477 101 1 8 466 9 485 0.0 731
Msa1049050 MtrunA17_Chr6g0454191 72.107 484 116 2 1 465 1 484 0.0 727
Msa1049050 MtrunA17_Chr6g0454351 72.222 486 98 3 1 466 1 469 0.0 720
Msa1049050 MtrunA17_Chr6g0453961 71.134 485 121 1 1 466 10 494 0.0 719
Msa1049050 MtrunA17_Chr6g0454181 70.186 483 126 1 1 465 1 483 0.0 716
Msa1049050 MtrunA17_Chr6g0454331 70.417 480 122 2 6 465 3 482 0.0 708
Msa1049050 MtrunA17_Chr6g0452771 72.727 484 114 1 1 466 1 484 0.0 706
Msa1049050 MtrunA17_Chr6g0454261 70.393 483 125 1 1 465 1 483 0.0 702
Msa1049050 MtrunA17_Chr6g0454211 70.747 482 123 1 2 465 289 770 0.0 696
Msa1049050 MtrunA17_Chr6g0454211 49.857 349 75 4 131 461 1 267 5.70e-99 313
Msa1049050 MtrunA17_Chr6g0454291 71.698 477 117 1 6 464 3 479 0.0 692
Msa1049050 MtrunA17_Chr8g0359821 69.979 483 125 2 1 465 1 481 0.0 692
Msa1049050 MtrunA17_Chr6g0454301 70.393 483 121 3 1 464 254 733 0.0 690
Msa1049050 MtrunA17_Chr6g0454301 78.947 228 48 0 233 460 1 228 1.08e-127 387
Msa1049050 MtrunA17_Chr3g0078841 69.215 484 127 3 1 465 1 481 0.0 689
Msa1049050 MtrunA17_Chr6g0454141 69.358 483 130 1 1 465 1 483 0.0 688
Msa1049050 MtrunA17_Chr8g0336331 69.215 484 126 4 1 465 1 480 0.0 688
Msa1049050 MtrunA17_Chr6g0454201 72.899 476 111 1 8 465 9 484 0.0 686
Msa1049050 MtrunA17_Chr6g0454341 68.802 484 129 3 1 465 1 481 0.0 685
Msa1049050 MtrunA17_Chr6g0454121 70.393 483 124 2 1 465 1 482 0.0 676
Msa1049050 MtrunA17_Chr6g0454321 68.632 475 127 3 1 456 1 472 0.0 670
Msa1049050 MtrunA17_Chr6g0454321 68.800 125 39 0 2 126 496 620 1.11e-50 182
Msa1049050 MtrunA17_Chr5g0423981 69.313 466 126 3 1 466 1 449 0.0 666
Msa1049050 MtrunA17_Chr6g0454151 68.247 485 132 3 1 466 1 482 0.0 656
Msa1049050 MtrunA17_Chr6g0454131 67.909 483 136 2 1 465 1 482 0.0 650
Msa1049050 MtrunA17_Chr6g0454251 66.412 393 114 1 6 380 3 395 0.0 549
Msa1049050 MtrunA17_Chr3g0092641 53.361 476 194 7 9 463 11 479 4.23e-178 507
Msa1049050 MtrunA17_Chr5g0426431 53.320 482 197 7 4 464 6 480 7.69e-175 499
Msa1049050 MtrunA17_Chr2g0278711 50.728 481 207 6 7 465 8 480 1.63e-167 480
Msa1049050 MtrunA17_Chr6g0454271 72.759 290 79 0 176 465 1 290 1.46e-161 458
Msa1049050 MtrunA17_Chr3g0118711 46.138 479 232 5 5 462 8 481 2.55e-156 452
Msa1049050 MtrunA17_Chr3g0118771 46.234 478 231 5 6 462 17 489 8.85e-156 451
Msa1049050 MtrunA17_Chr3g0118671 45.511 479 235 5 5 462 1 474 4.11e-155 449
Msa1049050 MtrunA17_Chr3g0118691 45.021 482 239 5 5 465 10 486 2.05e-154 447
Msa1049050 MtrunA17_Chr8g0355011 57.868 394 101 5 92 465 17 365 2.60e-154 442
Msa1049050 MtrunA17_Chr6g0454171 63.529 340 94 3 131 466 1 314 1.02e-151 434
Msa1049050 MtrunA17_Chr3g0118701 44.259 479 241 5 5 462 10 483 1.13e-151 440
Msa1049050 MtrunA17_Chr4g0050341 47.401 481 227 5 8 465 17 494 1.73e-150 437
Msa1049050 MtrunA17_Chr6g0454221 84.279 229 35 1 233 460 1 229 1.15e-140 405
Msa1049050 MtrunA17_Chr3g0118751 43.933 478 215 7 5 462 1 445 6.04e-140 409
Msa1049050 MtrunA17_Chr3g0118661 44.025 477 240 6 6 461 9 479 2.95e-133 393
Msa1049050 MtrunA17_Chr6g0453981 72.727 231 45 1 131 343 1 231 2.00e-115 338
Msa1049050 MtrunA17_Chr5g0426401 53.205 312 138 5 155 463 6 312 9.29e-112 332
Msa1049050 MtrunA17_Chr3g0118721 50.853 293 141 2 176 465 1 293 5.70e-106 317
Msa1049050 MtrunA17_Chr6g0454371 82.759 174 30 0 292 465 1 174 1.18e-104 308
Msa1049050 MtrunA17_Chr6g0454231 65.098 255 50 3 209 462 3 219 3.22e-104 318
Msa1049050 MtrunA17_Chr6g0454231 60.000 240 75 2 1 222 241 477 2.17e-89 280
Msa1049050 MtrunA17_Chr6g0453941 69.820 222 48 2 132 334 54 275 9.75e-104 310
Msa1049050 MtrunA17_Chr6g0453941 71.429 63 13 2 1 62 1 59 3.69e-19 87.4
Msa1049050 MtrunA17_Chr3g0112771 37.712 472 254 9 5 462 7 452 1.10e-102 314
Msa1049050 MtrunA17_Chr5g0412111 35.579 475 267 9 9 461 4 461 4.51e-96 297
Msa1049050 MtrunA17_Chr8g0336271 58.065 248 82 3 1 230 1 244 3.73e-94 286
Msa1049050 MtrunA17_Chr5g0412131 35.699 479 262 9 9 461 11 469 1.00e-92 289
Msa1049050 MtrunA17_Chr5g0412101 35.208 480 264 10 9 461 11 470 3.25e-89 280
Msa1049050 MtrunA17_Chr6g0454281 70.690 174 51 0 1 174 1 174 7.08e-86 262
Msa1049050 MtrunA17_Chr3g0112761 33.906 466 268 10 12 462 10 450 2.91e-83 264
Msa1049050 MtrunA17_Chr4g0032331 33.833 467 267 12 12 462 10 450 2.69e-81 259
Msa1049050 MtrunA17_Chr8g0336261 81.022 137 26 0 292 428 1 137 1.12e-80 246
Msa1049050 MtrunA17_Chr1g0207981 32.008 478 285 12 10 463 13 474 6.20e-78 251
Msa1049050 MtrunA17_Chr3g0098111 31.924 473 289 12 10 461 9 469 2.49e-74 241
Msa1049050 MtrunA17_Chr6g0464881 30.882 476 293 11 4 465 5 458 3.21e-74 240
Msa1049050 MtrunA17_Chr7g0218831 31.681 464 271 11 9 458 5 436 2.17e-73 238
Msa1049050 MtrunA17_Chr7g0218841 32.473 465 267 14 9 458 5 437 2.18e-70 230
Msa1049050 MtrunA17_Chr8g0365811 31.733 479 280 13 12 461 497 957 2.58e-70 240
Msa1049050 MtrunA17_Chr8g0365811 31.718 454 265 14 12 435 11 449 2.21e-61 215
Msa1049050 MtrunA17_Chr7g0218811 31.466 464 273 11 9 458 14 446 3.21e-70 229
Msa1049050 MtrunA17_Chr4g0053501 29.449 472 297 10 12 464 13 467 6.21e-70 230
Msa1049050 MtrunA17_Chr7g0218791 32.976 467 267 16 9 458 4 441 1.93e-69 228
Msa1049050 MtrunA17_Chr5g0414331 31.250 464 286 11 6 458 9 450 2.10e-69 228
Msa1049050 MtrunA17_Chr1g0207931 30.917 469 244 12 10 461 92 497 4.20e-69 228
Msa1049050 MtrunA17_Chr7g0250001 29.574 470 291 10 8 462 4 448 7.59e-69 226
Msa1049050 MtrunA17_Chr4g0053321 30.165 484 296 13 4 464 18 482 3.10e-68 226
Msa1049050 MtrunA17_Chr5g0414321 31.712 473 280 13 6 462 7 452 3.91e-68 224
Msa1049050 MtrunA17_Chr6g0464921 31.356 472 283 13 9 463 10 457 4.25e-68 224
Msa1049050 MtrunA17_Chr8g0380531 32.328 464 286 12 10 461 10 457 4.37e-68 224
Msa1049050 MtrunA17_Chr1g0161351 31.368 475 289 11 10 461 37 497 4.42e-68 226
Msa1049050 MtrunA17_Chr7g0249981 31.749 463 282 12 4 454 19 459 6.37e-68 225
Msa1049050 MtrunA17_Chr7g0218821 30.407 467 277 12 9 454 4 443 2.60e-67 222
Msa1049050 MtrunA17_Chr1g0207861 32.700 474 284 12 10 461 8 468 2.69e-67 223
Msa1049050 MtrunA17_Chr1g0207971 30.213 470 286 11 10 461 8 453 4.60e-67 222
Msa1049050 MtrunA17_Chr1g0207831 30.689 479 278 13 12 461 10 463 1.10e-65 218
Msa1049050 MtrunA17_Chr6g0464871 31.116 466 287 14 6 458 19 463 4.42e-64 214
Msa1049050 MtrunA17_Chr1g0207951 31.524 479 284 13 6 461 651 1108 5.25e-64 224
Msa1049050 MtrunA17_Chr1g0207951 31.224 474 286 12 6 461 119 570 6.62e-64 223
Msa1049050 MtrunA17_Chr6g0464861 30.258 466 290 12 6 458 7 450 8.62e-64 213
Msa1049050 MtrunA17_Chr7g0275681 31.224 490 290 14 5 462 7 481 1.42e-62 211
Msa1049050 MtrunA17_Chr6g0464841 30.128 468 289 13 6 458 7 451 1.89e-62 209
Msa1049050 MtrunA17_Chr6g0454111 66.429 140 47 0 173 312 44 183 3.70e-62 200
Msa1049050 MtrunA17_Chr7g0243631 30.328 488 290 14 10 461 13 486 6.68e-62 209
Msa1049050 MtrunA17_Chr5g0431441 31.106 479 274 13 10 462 18 466 1.62e-61 207
Msa1049050 MtrunA17_Chr4g0011051 31.800 500 284 16 5 462 4 488 1.94e-61 208
Msa1049050 MtrunA17_Chr7g0243931 30.707 495 287 14 6 461 13 490 1.28e-60 206
Msa1049050 MtrunA17_Chr7g0265041 29.495 495 299 13 9 465 10 492 5.51e-60 204
Msa1049050 MtrunA17_Chr7g0243951 29.939 491 295 16 6 461 7 483 2.55e-59 202
Msa1049050 MtrunA17_Chr4g0044511 29.592 490 300 13 6 466 36 509 4.75e-59 202
Msa1049050 MtrunA17_Chr5g0401721 29.228 479 296 14 11 462 9 471 5.16e-59 201
Msa1049050 MtrunA17_Chr8g0377921 30.146 481 291 18 9 462 2 464 2.33e-58 199
Msa1049050 MtrunA17_Chr7g0265151 29.278 485 302 13 10 462 9 484 1.06e-57 198
Msa1049050 MtrunA17_Chr7g0243681 29.184 490 288 16 10 461 11 479 2.55e-56 194
Msa1049050 MtrunA17_Chr7g0249931 29.025 472 285 15 4 454 34 476 3.27e-56 194
Msa1049050 MtrunA17_Chr7g0265101 29.142 501 293 15 8 464 7 489 4.33e-56 194
Msa1049050 MtrunA17_Chr5g0419761 29.447 506 294 16 7 466 6 494 1.67e-55 192
Msa1049050 MtrunA17_Chr3g0121991 30.612 490 279 18 10 461 79 545 3.02e-55 192
Msa1049050 MtrunA17_Chr5g0426411 55.030 169 70 3 8 175 10 173 3.62e-55 181
Msa1049050 MtrunA17_Chr5g0393591 29.638 469 263 11 10 461 17 435 4.20e-55 190
Msa1049050 MtrunA17_Chr7g0243861 29.175 497 303 16 6 466 10 493 6.57e-55 191
Msa1049050 MtrunA17_Chr3g0122001 30.063 479 296 10 10 461 486 952 1.32e-54 196
Msa1049050 MtrunA17_Chr3g0122001 30.372 484 289 12 10 461 6 473 2.06e-52 190
Msa1049050 MtrunA17_Chr4g0060511 29.555 494 297 17 6 461 7 487 1.79e-54 189
Msa1049050 MtrunA17_Chr7g0243771 28.834 489 292 16 10 461 6 475 3.25e-53 186
Msa1049050 MtrunA17_Chr5g0431361 28.958 480 275 13 10 461 12 453 1.11e-52 184
Msa1049050 MtrunA17_Chr7g0265051 28.343 501 295 17 8 464 7 487 1.84e-52 184
Msa1049050 MtrunA17_Chr7g0265141 30.143 491 292 14 10 462 9 486 3.07e-52 183
Msa1049050 MtrunA17_Chr8g0335141 29.555 494 278 15 3 457 2 464 4.59e-52 182
Msa1049050 MtrunA17_Chr7g0243801 27.642 492 302 14 6 461 3 476 6.11e-52 182
Msa1049050 MtrunA17_Chr7g0243871 28.367 490 295 16 6 461 5 472 1.48e-51 181
Msa1049050 MtrunA17_Chr5g0419771 28.032 503 287 16 10 462 36 513 2.27e-51 181
Msa1049050 MtrunA17_Chr8g0366391 29.243 489 289 16 10 461 9 477 8.77e-51 179
Msa1049050 MtrunA17_Chr8g0377941 30.165 484 275 17 12 462 9 462 9.49e-51 179
Msa1049050 MtrunA17_Chr7g0232401 27.607 489 282 13 7 454 3 460 1.01e-50 179
Msa1049050 MtrunA17_Chr4g0014061 29.253 482 281 13 13 458 12 469 1.04e-50 179
Msa1049050 MtrunA17_Chr6g0454381 61.268 142 37 1 131 254 1 142 1.72e-50 168
Msa1049050 MtrunA17_Chr1g0173121 27.789 475 290 14 12 461 16 462 5.46e-50 176
Msa1049050 MtrunA17_Chr1g0179901 27.088 491 308 16 10 462 16 494 1.05e-49 177
Msa1049050 MtrunA17_Chr3g0106231 28.358 469 286 10 10 462 18 452 1.94e-49 175
Msa1049050 MtrunA17_Chr7g0235051 28.512 484 271 15 10 460 11 452 2.04e-49 175
Msa1049050 MtrunA17_Chr5g0431371 28.992 476 277 14 10 461 10 448 2.98e-49 174
Msa1049050 MtrunA17_Chr6g0462531 27.721 487 291 13 8 459 2 462 6.14e-49 174
Msa1049050 MtrunA17_Chr7g0243851 29.193 483 264 16 8 461 9 442 1.14e-48 173
Msa1049050 MtrunA17_Chr7g0232391 26.789 489 296 14 7 460 3 464 1.73e-48 172
Msa1049050 MtrunA17_Chr6g0462521 31.471 340 202 9 136 459 124 448 1.82e-48 172
Msa1049050 MtrunA17_Chr5g0401851 28.514 498 290 15 8 461 8 483 1.85e-48 173
Msa1049050 MtrunA17_Chr5g0431401 27.696 473 287 13 10 461 10 448 2.23e-48 172
Msa1049050 MtrunA17_Chr7g0243781 26.639 488 301 14 10 461 9 475 2.51e-48 172
Msa1049050 MtrunA17_Chr8g0373301 30.750 400 224 14 70 437 64 442 2.53e-48 172
Msa1049050 MtrunA17_Chr4g0072761 28.664 464 293 10 10 461 15 452 2.71e-48 172
Msa1049050 MtrunA17_Chr8g0355221 27.801 482 306 13 11 461 16 486 2.89e-48 173
Msa1049050 MtrunA17_Chr6g0449931 28.866 485 279 16 8 454 4 460 4.84e-48 172
Msa1049050 MtrunA17_Chr5g0440421 29.077 509 299 22 1 462 1 494 6.46e-48 172
Msa1049050 MtrunA17_Chr1g0159551 27.331 472 287 16 15 461 19 459 2.08e-47 169
Msa1049050 MtrunA17_Chr4g0072771 26.981 467 306 9 7 461 22 465 3.86e-47 169
Msa1049050 MtrunA17_Chr6g0462571 28.736 348 206 7 136 457 126 457 4.79e-47 169
Msa1049050 MtrunA17_Chr4g0044501 28.310 491 288 15 10 461 10 475 5.05e-47 169
Msa1049050 MtrunA17_Chr6g0462541 29.464 336 195 8 148 457 140 459 5.79e-47 169
Msa1049050 MtrunA17_Chr7g0243761 28.000 475 288 14 10 461 11 454 6.44e-47 168
Msa1049050 MtrunA17_Chr5g0431421 28.092 477 282 13 10 462 10 449 7.38e-47 168
Msa1049050 MtrunA17_Chr7g0232311 28.189 486 291 14 5 458 1 460 7.69e-47 168
Msa1049050 MtrunA17_Chr5g0448551 26.941 438 282 10 7 429 4 418 1.77e-46 167
Msa1049050 MtrunA17_Chr7g0232411 26.613 496 288 17 7 460 3 464 1.90e-46 167
Msa1049050 MtrunA17_Chr4g0066131 28.571 476 290 13 13 458 16 471 1.98e-46 167
Msa1049050 MtrunA17_Chr8g0335161 32.537 335 188 10 142 457 147 462 3.74e-46 166
Msa1049050 MtrunA17_Chr1g0153451 28.968 504 272 21 5 464 1 462 4.88e-46 166
Msa1049050 MtrunA17_Chr6g0462551 27.536 483 285 17 12 457 6 460 5.88e-46 166
Msa1049050 MtrunA17_Chr8g0347281 29.026 503 262 16 9 464 17 471 6.63e-46 166
Msa1049050 MtrunA17_Chr7g0249961 37.607 234 136 5 226 454 24 252 7.40e-46 160
Msa1049050 MtrunA17_Chr4g0066221 27.766 479 304 16 13 461 14 480 9.29e-46 166
Msa1049050 MtrunA17_Chr1g0165701 27.935 494 287 16 11 461 16 483 2.05e-45 165
Msa1049050 MtrunA17_Chr5g0428081 27.708 480 302 15 13 461 14 479 2.77e-45 164
Msa1049050 MtrunA17_Chr8g0347271 28.628 503 264 16 9 464 18 472 4.32e-45 164
Msa1049050 MtrunA17_Chr2g0294931 26.875 480 308 13 13 461 14 481 4.87e-45 164
Msa1049050 MtrunA17_Chr8g0336651 28.400 500 281 18 7 464 778 1242 5.24e-45 169
Msa1049050 MtrunA17_Chr8g0336651 27.071 495 284 16 5 457 1 460 8.31e-43 162
Msa1049050 MtrunA17_Chr8g0336651 33.083 266 137 6 207 464 541 773 1.42e-34 137
Msa1049050 MtrunA17_Chr6g0459311 32.660 297 169 7 179 457 184 467 6.05e-45 163
Msa1049050 MtrunA17_Chr5g0427561 77.273 88 20 0 378 465 1 88 6.24e-45 152
Msa1049050 MtrunA17_Chr6g0463851 26.294 483 308 13 13 461 14 482 8.64e-45 163
Msa1049050 MtrunA17_Chr6g0463891 27.935 494 289 17 12 461 14 484 9.02e-45 163
Msa1049050 MtrunA17_Chr5g0420801 28.184 479 292 15 6 458 3 455 1.14e-44 162
Msa1049050 MtrunA17_Chr7g0275511 28.074 488 268 18 9 450 14 464 2.49e-44 162
Msa1049050 MtrunA17_Chr8g0336691 29.973 367 215 9 121 457 1021 1375 3.13e-44 166
Msa1049050 MtrunA17_Chr8g0336691 27.953 508 281 16 2 464 5 472 3.94e-43 163
Msa1049050 MtrunA17_Chr8g0336691 27.629 485 274 18 7 464 477 911 9.75e-39 150
Msa1049050 MtrunA17_Chr8g0336741 27.273 473 267 15 10 440 13 450 3.22e-44 161
Msa1049050 MtrunA17_Chr8g0339631 29.380 371 207 11 121 454 109 461 3.73e-44 161
Msa1049050 MtrunA17_Chr8g0374931 27.443 481 304 13 13 461 14 481 5.75e-44 161
Msa1049050 MtrunA17_Chr4g0066151 27.673 477 299 12 13 461 21 479 6.21e-44 160
Msa1049050 MtrunA17_Chr5g0416741 26.884 491 296 13 12 461 15 483 7.36e-44 160
Msa1049050 MtrunA17_Chr7g0218311 27.743 483 297 13 13 461 19 483 9.57e-44 160
Msa1049050 MtrunA17_Chr2g0294921 28.601 479 301 15 13 461 163 630 1.28e-43 162
Msa1049050 MtrunA17_Chr5g0432731 32.051 312 176 9 167 462 6 297 2.67e-43 154
Msa1049050 MtrunA17_Chr8g0370941 27.096 513 283 17 7 459 5 486 2.78e-43 159
Msa1049050 MtrunA17_Chr5g0416821 28.157 483 289 16 12 461 16 473 3.06e-43 159
Msa1049050 MtrunA17_Chr8g0361371 26.721 494 290 16 7 458 4 467 3.55e-43 158
Msa1049050 MtrunA17_Chr6g0486251 31.650 297 172 7 179 457 177 460 7.21e-43 157
Msa1049050 MtrunA17_Chr6g0486201 31.650 297 172 7 179 457 177 460 7.21e-43 157
Msa1049050 MtrunA17_Chr8g0369341 27.893 484 299 14 6 459 3 466 8.01e-43 157
Msa1049050 MtrunA17_Chr8g0336731 29.459 370 219 10 118 458 131 487 1.92e-42 157
Msa1049050 MtrunA17_Chr2g0329111 27.634 503 284 18 7 458 3 476 2.01e-42 157
Msa1049050 MtrunA17_Chr8g0339461 30.532 357 196 11 121 440 109 450 3.42e-42 155
Msa1049050 MtrunA17_Chr4g0066261 28.195 493 285 15 13 461 14 481 5.39e-42 155
Msa1049050 MtrunA17_Chr4g0066201 29.253 482 280 15 13 461 21 474 5.85e-42 155
Msa1049050 MtrunA17_Chr8g0339451 30.532 357 196 11 121 440 101 442 6.86e-42 155
Msa1049050 MtrunA17_Chr5g0410941 26.860 484 299 14 13 461 26 489 9.52e-42 155
Msa1049050 MtrunA17_Chr5g0429711 28.512 484 291 17 5 461 6 461 1.32e-41 154
Msa1049050 MtrunA17_Chr7g0265111 26.547 501 297 15 10 462 39 516 1.88e-41 155
Msa1049050 MtrunA17_Chr7g0232331 26.483 472 279 16 7 440 3 444 3.08e-41 153
Msa1049050 MtrunA17_Chr4g0066281 29.388 490 275 16 13 465 15 470 3.08e-41 153
Msa1049050 MtrunA17_Chr7g0232341 29.967 307 179 9 168 452 170 462 7.33e-41 152
Msa1049050 MtrunA17_Chr8g0382021 32.482 274 156 7 208 461 224 488 8.73e-41 152
Msa1049050 MtrunA17_Chr5g0442561 25.150 501 301 16 7 462 2 473 1.63e-40 151
Msa1049050 MtrunA17_Chr8g0339601 32.632 285 153 8 182 440 38 309 1.76e-40 148
Msa1049050 MtrunA17_Chr3g0079731 26.283 487 304 12 12 459 8 478 3.65e-40 150
Msa1049050 MtrunA17_Chr8g0334851 26.327 471 283 15 8 440 4 448 1.32e-39 149
Msa1049050 MtrunA17_Chr6g0463861 26.446 484 307 14 13 466 14 478 5.38e-39 147
Msa1049050 MtrunA17_Chr4g0044521 26.411 496 292 18 5 459 1 464 6.80e-39 146
Msa1049050 MtrunA17_Chr5g0442601 27.362 508 285 20 7 462 401 876 7.74e-39 150
Msa1049050 MtrunA17_Chr5g0442601 25.434 346 195 7 81 402 27 333 2.94e-25 109
Msa1049050 MtrunA17_Chr8g0374901 25.519 482 308 13 13 461 15 478 1.49e-38 146
Msa1049050 MtrunA17_Chr8g0374971 26.195 481 308 11 13 461 15 480 2.24e-38 145
Msa1049050 MtrunA17_Chr4g0066171 28.513 491 293 17 2 461 13 476 3.25e-38 145
Msa1049050 MtrunA17_Chr5g0448521 26.815 496 294 15 7 462 2 468 3.37e-38 144
Msa1049050 MtrunA17_Chr8g0374941 26.844 488 296 14 13 461 952 1417 4.72e-38 148
Msa1049050 MtrunA17_Chr8g0374941 25.482 467 291 13 13 442 14 460 1.55e-35 140
Msa1049050 MtrunA17_Chr8g0374941 25.591 465 293 14 13 442 479 925 1.74e-34 137
Msa1049050 MtrunA17_Chr5g0442541 25.904 498 294 14 7 462 2 466 5.91e-38 144
Msa1049050 MtrunA17_Chr4g0042931 27.835 485 287 16 10 460 7 462 7.28e-38 144
Msa1049050 MtrunA17_Chr5g0403641 31.438 299 162 8 196 463 218 504 9.60e-38 144
Msa1049050 MtrunA17_Chr5g0442521 23.742 497 308 16 7 458 2 472 1.16e-37 143
Msa1049050 MtrunA17_Chr7g0243711 35.366 246 139 7 234 461 73 316 1.21e-37 140
Msa1049050 MtrunA17_Chr4g0044481 28.333 420 229 14 10 404 27 399 1.34e-37 142
Msa1049050 MtrunA17_Chr8g0339441 37.500 192 100 4 269 440 217 408 3.39e-37 141
Msa1049050 MtrunA17_Chr8g0334831 26.087 483 277 17 5 437 1 453 4.72e-37 142
Msa1049050 MtrunA17_Chr2g0294941 29.859 355 202 13 124 442 17 360 5.22e-37 139
Msa1049050 MtrunA17_Chr8g0334861 28.165 316 182 9 169 460 168 462 5.38e-37 141
Msa1049050 MtrunA17_Chr8g0350881 24.738 477 322 10 12 461 14 480 5.40e-37 142
Msa1049050 MtrunA17_Chr1g0153461 36.232 207 115 4 268 457 2 208 5.66e-37 135
Msa1049050 MtrunA17_Chr5g0442581 25.737 509 292 16 7 462 2 477 5.97e-37 142
Msa1049050 MtrunA17_Chr3g0106251 30.903 288 175 5 184 462 22 294 8.08e-37 137
Msa1049050 MtrunA17_Chr5g0442491 24.206 504 304 13 7 462 2 475 1.93e-36 140
Msa1049050 MtrunA17_Chr7g0243611 32.168 286 175 11 131 408 3 277 4.85e-35 132
Msa1049050 MtrunA17_Chr5g0431431 32.830 265 153 7 167 427 110 353 1.99e-34 132
Msa1049050 MtrunA17_Chr8g0336321 27.443 481 285 18 10 458 7 455 8.18e-34 132
Msa1049050 MtrunA17_Chr5g0442511 24.187 492 286 18 7 458 46 490 1.90e-33 132
Msa1049050 MtrunA17_Chr4g0042891 26.157 497 282 18 10 460 7 464 2.07e-33 131
Msa1049050 MtrunA17_Chr2g0307961 25.451 499 294 16 6 463 9 470 3.79e-33 130
Msa1049050 MtrunA17_Chr7g0241781 26.906 446 267 15 7 438 6 406 4.64e-33 130
Msa1049050 MtrunA17_Chr7g0243911 37.037 189 102 3 265 436 17 205 6.18e-33 124
Msa1049050 MtrunA17_Chr8g0336251 27.235 481 286 18 10 458 7 455 9.51e-33 129
Msa1049050 MtrunA17_Chr5g0429681 29.301 372 202 14 122 458 151 496 9.98e-33 130
Msa1049050 MtrunA17_Chr7g0243811 25.366 410 254 12 22 408 1 381 1.28e-32 127
Msa1049050 MtrunA17_Chr2g0302991 28.261 368 220 11 122 461 111 462 1.60e-32 129
Msa1049050 MtrunA17_Chr7g0241801 27.130 446 266 17 7 438 6 406 2.82e-32 127
Msa1049050 MtrunA17_Chr2g0302961 25.100 502 289 15 8 461 3 465 1.57e-30 123
Msa1049050 MtrunA17_Chr1g0207881 39.535 129 72 1 339 461 256 384 3.00e-30 121
Msa1049050 MtrunA17_Chr8g0361411 26.639 488 284 19 8 461 6 453 2.02e-29 120
Msa1049050 MtrunA17_Chr6g0482061 25.352 497 296 18 10 460 11 478 2.40e-29 120
Msa1049050 MtrunA17_Chr7g0231631 32.143 252 163 5 215 461 11 259 4.43e-29 115
Msa1049050 MtrunA17_Chr2g0278721 27.682 466 282 19 6 439 513 955 4.60e-29 121
Msa1049050 MtrunA17_Chr2g0278721 32.370 173 108 4 272 438 274 443 4.73e-21 96.7
Msa1049050 MtrunA17_Chr6g0466831 25.855 468 290 15 1 438 1 441 2.68e-28 117
Msa1049050 MtrunA17_Chr7g0232351 31.278 227 123 7 168 379 170 378 3.11e-28 115
Msa1049050 MtrunA17_Chr5g0427571 33.074 257 154 8 211 458 42 289 3.84e-28 113
Msa1049050 MtrunA17_Chr5g0409591 31.203 266 142 10 206 439 205 461 4.61e-28 116
Msa1049050 MtrunA17_Chr3g0079711 33.514 185 101 5 296 459 3 186 2.11e-27 108
Msa1049050 MtrunA17_Chr6g0466841 25.536 466 294 19 1 438 1 441 4.75e-27 113
Msa1049050 MtrunA17_Chr6g0454391 70.769 65 19 0 354 418 11 75 4.84e-27 105
Msa1049050 MtrunA17_Chr4g0069611 25.597 461 283 17 6 438 10 438 4.89e-27 113
Msa1049050 MtrunA17_Chr8g0367221 26.535 456 289 17 7 437 9 443 5.80e-27 115
Msa1049050 MtrunA17_Chr8g0367221 25.275 455 297 12 7 437 1285 1720 5.08e-25 109
Msa1049050 MtrunA17_Chr8g0367221 25.163 461 290 16 7 437 795 1230 4.11e-24 106
Msa1049050 MtrunA17_Chr7g0250021 29.052 327 196 10 4 316 6 310 6.88e-27 110
Msa1049050 MtrunA17_Chr6g0464091 24.249 466 294 15 4 438 11 448 2.26e-26 111
Msa1049050 MtrunA17_Chr3g0092031 32.768 177 110 4 268 438 2 175 7.77e-26 104
Msa1049050 MtrunA17_Chr2g0302851 25.108 462 283 18 6 438 12 439 3.07e-25 108
Msa1049050 MtrunA17_Chr8g0357361 34.634 205 117 7 207 404 57 251 1.54e-23 99.8
Msa1049050 MtrunA17_Chr4g0040691 24.280 486 306 15 10 465 8 461 6.37e-23 101
Msa1049050 MtrunA17_Chr8g0337381 40.310 129 67 3 340 464 2 124 1.86e-21 90.1
Msa1049050 MtrunA17_Chr4g0039881 22.348 443 291 14 20 438 2 415 7.38e-21 94.7
Msa1049050 MtrunA17_Chr3g0118741 59.322 59 24 0 5 63 1 59 1.05e-20 85.9
Msa1049050 MtrunA17_Chr4g0066141 36.765 136 72 2 340 461 216 351 2.37e-20 92.4
Msa1049050 MtrunA17_Chr1g0196851 28.400 250 152 9 203 438 240 476 4.91e-20 92.8
Msa1049050 MtrunA17_Chr2g0278741 31.429 175 107 4 272 438 356 525 2.97e-19 90.5
Msa1049050 MtrunA17_Chr4g0040711 27.869 244 150 8 207 438 206 435 5.20e-19 89.4
Msa1049050 MtrunA17_Chr4g0029151 22.698 467 293 17 4 438 14 444 5.53e-19 89.4
Msa1049050 MtrunA17_Chr4g0029131 26.482 253 153 9 203 438 200 436 1.37e-18 88.6
Msa1049050 MtrunA17_Chr2g0319761 25.934 455 284 16 10 438 8 435 2.26e-17 84.3
Msa1049050 MtrunA17_Chr2g0283041 23.696 460 287 16 10 438 7 433 1.11e-16 82.0
Msa1049050 MtrunA17_Chr2g0319751 24.512 461 281 16 10 437 485 911 9.20e-16 80.1
Msa1049050 MtrunA17_Chr6g0454241 75.610 41 10 0 421 461 1 41 2.32e-15 71.2
Msa1049050 MtrunA17_Chr2g0319791 23.400 453 296 14 10 437 8 434 4.65e-15 77.0
Msa1049050 MtrunA17_Chr7g0243731 40.278 72 43 0 333 404 2 73 2.12e-14 68.6
Msa1049050 MtrunA17_Chr8g0334841 29.814 161 96 4 183 339 11 158 3.85e-14 70.5
Msa1049050 MtrunA17_Chr7g0267931 75.676 37 8 1 15 50 25 61 1.20e-13 65.9
Msa1049050 MtrunA17_Chr3g0118731 33.333 117 73 2 62 178 28 139 9.69e-13 66.2
Msa1049050 MtrunA17_Chr1g0207911 26.255 259 153 11 12 250 10 250 1.34e-12 67.8
Msa1049050 MtrunA17_Chr7g0243721 33.333 111 73 1 206 315 25 135 6.13e-12 63.2
Msa1049050 MtrunA17_Chr6g0469961 28.049 164 101 4 156 312 11 164 6.69e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1049050 AT1G22380.1 50.833 480 210 5 7 465 10 484 1.11e-175 502
Msa1049050 AT1G22400.1 50.000 482 214 5 6 465 9 485 4.17e-175 500
Msa1049050 AT1G22340.1 50.308 487 213 7 2 464 3 484 1.81e-174 499
Msa1049050 AT1G22370.2 52.008 473 206 5 7 463 10 477 4.33e-169 484
Msa1049050 AT1G22360.1 49.793 484 217 5 1 463 1 479 5.52e-169 484
Msa1049050 AT1G22360.2 48.140 484 213 6 1 463 1 467 1.95e-159 460
Msa1049050 AT1G78270.1 46.653 478 229 6 6 462 9 481 9.64e-159 459
Msa1049050 AT1G22370.1 52.921 291 134 2 176 463 17 307 7.83e-104 312
Msa1049050 AT5G59590.1 38.116 467 247 13 7 458 7 446 3.25e-94 292
Msa1049050 AT5G59580.1 36.498 474 258 12 8 466 7 452 6.97e-89 278
Msa1049050 AT3G46660.1 37.393 468 241 12 12 458 16 452 6.65e-88 276
Msa1049050 AT3G46670.1 36.266 466 251 12 10 458 9 445 1.28e-87 275
Msa1049050 AT3G11340.1 34.047 467 268 8 8 462 7 445 2.30e-87 275
Msa1049050 AT3G46700.1 35.181 469 260 11 7 461 6 444 3.15e-86 271
Msa1049050 AT3G46650.1 34.490 461 263 11 1 456 1 427 1.65e-83 264
Msa1049050 AT3G46680.1 34.316 475 259 13 5 458 4 446 8.89e-82 260
Msa1049050 AT3G46690.1 35.244 471 258 10 7 459 6 447 1.60e-81 259
Msa1049050 AT5G05860.1 33.405 467 272 10 10 463 9 449 6.13e-81 258
Msa1049050 AT5G05900.1 33.262 466 265 13 10 458 8 444 3.05e-79 253
Msa1049050 AT5G05880.1 32.900 462 273 10 10 458 8 445 5.47e-79 253
Msa1049050 AT5G05890.1 33.550 462 274 9 10 458 8 449 7.88e-79 253
Msa1049050 AT5G38010.1 34.244 476 261 10 6 459 6 451 6.86e-78 250
Msa1049050 AT5G05870.1 34.335 466 273 10 10 461 8 454 1.22e-77 250
Msa1049050 AT3G46720.1 34.615 468 254 11 7 458 6 437 5.31e-77 248
Msa1049050 AT5G38040.1 34.354 457 256 11 19 459 19 447 6.57e-77 248
Msa1049050 AT3G55700.1 32.421 475 276 14 6 462 4 451 1.98e-76 246
Msa1049050 AT2G36970.1 29.857 489 296 14 1 461 1 470 2.79e-71 234
Msa1049050 AT4G15490.1 30.103 485 294 12 6 464 4 469 1.23e-70 232
Msa1049050 AT4G15500.1 30.126 478 288 11 9 462 8 463 1.36e-70 232
Msa1049050 AT3G21560.1 30.021 483 293 10 9 464 11 475 3.72e-70 231
Msa1049050 AT3G02100.1 31.924 473 273 13 8 458 11 456 8.51e-70 229
Msa1049050 AT4G15480.1 30.271 479 288 11 10 461 19 478 2.86e-69 229
Msa1049050 AT2G26480.1 29.560 477 284 10 7 464 5 448 6.06e-69 227
Msa1049050 AT2G31750.1 31.092 476 281 13 8 462 6 455 6.64e-69 227
Msa1049050 AT2G31750.2 31.092 476 281 13 8 462 6 455 1.67e-68 227
Msa1049050 AT2G43840.2 31.915 470 282 14 8 464 5 449 6.22e-68 224
Msa1049050 AT3G55710.1 32.017 481 274 17 6 462 4 455 9.34e-68 224
Msa1049050 AT2G43820.1 31.942 479 274 16 6 464 3 449 1.01e-67 223
Msa1049050 AT1G05680.1 32.548 467 274 13 10 460 6 447 1.54e-67 223
Msa1049050 AT2G43840.1 31.702 470 283 14 8 464 5 449 9.53e-67 221
Msa1049050 AT2G31790.1 32.347 473 275 15 7 458 5 453 4.14e-66 219
Msa1049050 AT2G28080.1 31.635 471 284 12 14 464 22 474 1.05e-65 219
Msa1049050 AT1G05675.1 31.130 469 278 13 10 458 6 449 4.38e-64 214
Msa1049050 AT2G36770.1 29.447 506 290 15 2 462 6 489 5.54e-64 215
Msa1049050 AT4G01070.1 32.454 493 258 16 6 454 4 465 2.10e-60 205
Msa1049050 AT2G23250.1 30.388 464 279 13 13 461 1 435 3.43e-60 203
Msa1049050 AT4G34131.1 30.408 490 299 16 1 460 1 478 5.99e-60 204
Msa1049050 AT2G36780.1 29.779 497 284 15 10 462 14 489 6.42e-60 204
Msa1049050 AT2G36750.1 31.124 498 275 17 10 462 10 484 6.80e-60 204
Msa1049050 AT2G36800.1 31.440 493 282 17 10 462 12 488 1.15e-59 203
Msa1049050 AT2G15480.1 29.184 490 316 10 1 465 1 484 3.17e-59 202
Msa1049050 AT3G53160.1 30.285 492 288 16 10 462 8 483 3.97e-59 202
Msa1049050 AT2G36760.1 29.293 495 289 13 10 462 14 489 5.58e-59 202
Msa1049050 AT2G23260.1 30.737 475 285 14 7 463 7 455 4.61e-58 198
Msa1049050 AT2G36790.1 32.406 503 284 17 1 462 1 488 2.84e-57 197
Msa1049050 AT2G15480.2 28.800 500 315 11 1 465 1 494 2.99e-57 197
Msa1049050 AT4G15550.1 29.691 485 284 14 9 460 12 472 1.40e-56 195
Msa1049050 AT5G17050.1 28.306 484 286 13 6 462 8 457 1.45e-56 194
Msa1049050 AT2G15490.3 29.897 485 301 12 10 465 7 481 6.35e-56 193
Msa1049050 AT5G17040.1 26.496 468 297 9 10 462 5 440 1.59e-55 191
Msa1049050 AT1G05560.1 28.392 479 286 18 9 461 4 451 1.68e-55 192
Msa1049050 AT2G15490.1 29.713 488 301 12 10 465 7 484 2.54e-55 192
Msa1049050 AT1G05560.2 28.392 479 286 18 9 461 54 501 3.37e-55 192
Msa1049050 AT5G66690.1 28.169 497 278 15 8 460 5 466 7.95e-55 190
Msa1049050 AT3G53150.1 28.827 503 300 15 7 462 19 510 1.20e-54 191
Msa1049050 AT5G26310.1 27.419 496 283 15 8 460 5 466 3.44e-54 189
Msa1049050 AT1G05530.1 28.306 484 287 15 8 462 3 455 8.10e-53 184
Msa1049050 AT2G30140.2 28.721 477 284 14 6 461 9 450 1.25e-52 184
Msa1049050 AT2G30140.1 28.661 478 284 14 6 461 9 451 1.88e-52 183
Msa1049050 AT4G14090.1 29.474 475 286 17 6 460 9 454 2.22e-52 183
Msa1049050 AT5G17030.1 27.273 473 304 11 6 462 8 456 2.65e-52 183
Msa1049050 AT1G01420.1 30.189 477 284 15 9 457 7 462 1.00e-51 182
Msa1049050 AT1G01420.2 30.189 477 284 15 9 457 10 465 1.07e-51 182
Msa1049050 AT1G30530.1 28.450 471 285 14 11 462 14 451 1.61e-51 181
Msa1049050 AT5G17040.2 30.769 299 179 4 173 462 59 338 3.19e-51 177
Msa1049050 AT4G34138.1 28.400 500 290 15 8 465 9 482 5.43e-51 180
Msa1049050 AT1G24100.1 28.630 489 275 14 8 461 9 458 3.44e-50 177
Msa1049050 AT5G14860.1 30.285 492 289 16 5 461 3 475 1.38e-49 176
Msa1049050 AT4G34135.1 28.310 491 299 15 6 460 7 480 1.78e-48 173
Msa1049050 AT3G22250.1 28.481 474 280 15 5 443 3 452 7.87e-48 171
Msa1049050 AT2G30150.2 27.197 478 284 14 10 461 13 452 5.64e-47 169
Msa1049050 AT2G30150.1 27.004 474 282 14 14 461 1 436 1.30e-45 164
Msa1049050 AT1G10400.1 27.443 481 299 15 7 460 4 461 2.61e-45 164
Msa1049050 AT3G50740.1 26.946 501 285 18 8 460 5 472 3.27e-45 164
Msa1049050 AT1G01390.1 28.221 489 289 17 9 464 7 466 1.90e-44 162
Msa1049050 AT1G01390.2 28.221 489 289 17 9 464 24 483 2.54e-44 162
Msa1049050 AT3G16520.3 29.558 362 214 12 122 459 113 457 7.06e-44 160
Msa1049050 AT4G36770.1 28.992 476 260 16 10 442 4 444 3.87e-43 158
Msa1049050 AT3G16520.2 30.904 343 194 12 122 436 113 440 3.92e-43 158
Msa1049050 AT3G16520.1 30.904 343 194 12 122 436 113 440 4.57e-43 158
Msa1049050 AT5G03490.1 28.000 475 294 16 6 460 15 461 1.54e-42 157
Msa1049050 AT5G37950.1 30.376 372 213 11 25 379 1 343 7.66e-42 152
Msa1049050 AT2G16890.2 27.846 492 282 17 10 461 9 467 1.06e-41 155
Msa1049050 AT5G37950.2 30.435 368 212 11 25 379 1 337 1.57e-41 151
Msa1049050 AT2G29710.1 26.465 495 292 19 7 462 2 463 5.46e-41 152
Msa1049050 AT4G15280.1 25.948 501 289 12 12 462 6 474 6.54e-41 152
Msa1049050 AT4G15280.2 25.948 501 289 12 12 462 38 506 9.73e-41 153
Msa1049050 AT1G73880.1 28.310 491 288 19 6 462 7 467 2.57e-40 151
Msa1049050 AT2G18560.1 27.551 392 217 14 105 454 3 369 2.29e-39 146
Msa1049050 AT3G21790.1 27.586 493 294 13 12 461 6 478 4.79e-39 148
Msa1049050 AT3G21800.1 26.653 499 287 14 12 461 7 475 1.24e-37 144
Msa1049050 AT4G15260.1 28.610 367 205 10 135 462 7 355 1.90e-37 140
Msa1049050 AT3G21760.1 25.859 495 302 11 12 461 6 480 6.43e-37 142
Msa1049050 AT2G18570.1 25.971 489 288 19 8 454 3 459 8.80e-37 141
Msa1049050 AT3G21750.1 26.200 500 292 15 8 462 2 469 1.21e-36 140
Msa1049050 AT2G29730.1 25.887 479 305 15 12 462 7 463 1.20e-35 138
Msa1049050 AT3G21780.1 27.364 497 288 16 8 461 2 468 1.69e-35 137
Msa1049050 AT1G51210.1 28.381 451 265 18 8 436 18 432 4.90e-34 133
Msa1049050 AT1G07250.1 30.216 278 169 7 199 462 207 473 1.84e-33 132
Msa1049050 AT1G07260.1 28.467 274 174 6 202 462 208 472 1.99e-33 132
Msa1049050 AT5G49690.1 26.471 442 283 16 10 433 10 427 6.87e-33 130
Msa1049050 AT2G29740.1 26.230 488 305 13 6 458 4 471 1.13e-32 129
Msa1049050 AT5G65550.1 25.383 457 293 14 8 439 7 440 1.22e-32 129
Msa1049050 AT2G29750.1 26.122 490 298 17 12 462 10 474 9.19e-32 127
Msa1049050 AT2G16890.3 26.058 449 260 16 10 419 9 424 7.26e-31 124
Msa1049050 AT1G07240.1 27.698 278 176 7 201 462 208 476 1.53e-30 124
Msa1049050 AT5G12890.1 24.900 498 306 20 12 465 12 485 4.00e-30 122
Msa1049050 AT1G06000.1 25.155 485 291 12 1 463 1 435 8.68e-30 121
Msa1049050 AT4G01070.2 31.231 333 176 11 6 316 4 305 3.08e-27 112
Msa1049050 AT2G22590.1 25.652 460 286 14 8 437 13 446 1.23e-25 109
Msa1049050 AT4G34135.2 27.976 336 201 12 6 316 7 326 5.71e-24 102
Msa1049050 AT2G22930.1 23.830 470 302 14 10 461 6 437 1.05e-20 94.7
Msa1049050 AT4G27570.1 23.230 452 294 15 8 438 5 424 3.80e-20 93.2
Msa1049050 AT1G64910.1 23.438 448 289 17 10 438 6 418 8.53e-20 92.0
Msa1049050 AT4G27560.1 28.962 183 118 5 266 438 244 424 3.49e-19 90.1
Msa1049050 AT5G54010.1 24.123 456 291 19 5 443 1 418 6.67e-19 89.4
Msa1049050 AT5G53990.1 23.163 449 289 14 10 438 6 418 4.75e-18 86.7
Msa1049050 AT4G09500.1 29.775 178 113 5 271 438 218 393 3.28e-17 84.0
Msa1049050 AT4G09500.2 29.775 178 113 5 271 438 243 418 3.29e-17 84.0
Msa1049050 AT5G54060.1 25.918 463 271 21 12 437 15 442 2.68e-16 81.6
Msa1049050 AT3G29630.2 30.102 196 116 6 272 463 220 398 6.82e-16 80.1
Msa1049050 AT3G29630.1 30.102 196 116 6 272 463 246 424 8.05e-16 80.1
Msa1049050 AT2G23210.1 24.232 293 186 9 1 281 1 269 1.55e-14 74.3
Msa1049050 AT1G64920.1 27.624 181 115 6 272 438 244 422 1.01e-13 73.6
Msa1049050 AT1G50580.1 23.195 457 290 17 5 438 1 419 1.90e-13 72.4

Find 103 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAACTTCTTCACCTTAA+AGG 0.144726 7_2:-11886236 Msa1049050:CDS
CATCTTTAGGTTCAAATCTT+TGG 0.169174 7_2:-11884861 Msa1049050:CDS
CAGATATATCTACAATTTAT+TGG 0.169487 7_2:+11884466 None:intergenic
TTCAATGACAAATTCTAAAA+TGG 0.170437 7_2:+11885041 None:intergenic
AGGTTATGTGAAAGCCTTTA+AGG 0.238529 7_2:+11886222 None:intergenic
AGGATCTACCTGACGTAATA+AGG 0.252720 7_2:-11885083 Msa1049050:CDS
GTAGATATATCTGCAATATA+TGG 0.270450 7_2:-11884456 Msa1049050:CDS
GAACTTGGACAAGGTTATTA+AGG 0.278762 7_2:-11884272 Msa1049050:CDS
CATAGTAACTTGGCATCTTT+AGG 0.280176 7_2:-11884874 Msa1049050:CDS
AGGCCTAATGATCCACAAAA+AGG 0.291358 7_2:+11884699 None:intergenic
TCAGCAACTTGTATGGTAAA+TGG 0.305820 7_2:+11885927 None:intergenic
ATATGACCTTGAAGTGGATA+TGG 0.311421 7_2:+11886278 None:intergenic
CAAACGGTTGTGATTGTATT+CGG 0.353461 7_2:+11886190 None:intergenic
GTATGAACAACCACCGATAC+TGG 0.379700 7_2:+11884297 None:intergenic
GTTGGTGAAAAGAGAAGGAT+TGG 0.388786 7_2:+11885891 None:intergenic
CGCTTTCTTCCTTAACTCTA+CGG 0.399153 7_2:+11884330 None:intergenic
GAATTGATGGTAGGAGATAA+AGG 0.399806 7_2:-11884373 Msa1049050:CDS
AGCAACTATTAGAGTTTGCT+TGG 0.402899 7_2:-11884744 Msa1049050:CDS
ATTAGAGTTTGCTTGGGGTC+TGG 0.403368 7_2:-11884737 Msa1049050:CDS
AAACTCAGATGACATAATAA+AGG 0.403710 7_2:+11884657 None:intergenic
TCTGTTGTTTATGTGAGTTT+TGG 0.408759 7_2:-11884790 Msa1049050:CDS
AGAGGTTCTAATTCTCTTGA+TGG 0.408792 7_2:-11886158 Msa1049050:CDS
GGCAAAATGCCGTAGAGTTA+AGG 0.409968 7_2:-11884339 Msa1049050:CDS
GAAGCTGATCAATGAATTGA+TGG 0.416881 7_2:-11884386 Msa1049050:CDS
GCAACTATTAGAGTTTGCTT+GGG 0.431882 7_2:-11884743 Msa1049050:CDS
ATCTGCAATATATGGGAGAT+TGG 0.432181 7_2:-11884448 Msa1049050:CDS
ATTGCAGAACTTTCGATTGA+AGG 0.433558 7_2:-11885103 Msa1049050:CDS
TTCCCTTCATTATATACCAT+TGG 0.440869 7_2:-11884928 Msa1049050:CDS
TTGATTCCATATCCACTTCA+AGG 0.446621 7_2:-11886284 Msa1049050:CDS
CCATTGGAGTTAGACCATCT+TGG 0.451949 7_2:+11886108 None:intergenic
ATTCTCTTCAGCAACTTGTA+TGG 0.457568 7_2:+11885920 None:intergenic
ATTAGGCCTGATCTTGTCAT+TGG 0.460027 7_2:-11884685 Msa1049050:CDS
GGTCCAATGGTATATAATGA+AGG 0.464084 7_2:+11884925 None:intergenic
GTATTGAACCACCCTTCAAT+TGG 0.464768 7_2:-11884580 Msa1049050:CDS
GAGCCGCCAATGACAAGATC+AGG 0.465836 7_2:+11884679 None:intergenic
TCAATGACAAATTCTAAAAT+GGG 0.466000 7_2:+11885042 None:intergenic
AAGAACTTCATCAAACCCTT+TGG 0.468245 7_2:-11886032 Msa1049050:CDS
TGTCAAACATTGTACGAAAG+TGG 0.469912 7_2:+11885841 None:intergenic
GCAAACTCTAATAGTTGCTC+TGG 0.475575 7_2:+11884748 None:intergenic
TAGATATATCTGCAATATAT+GGG 0.477765 7_2:-11884455 Msa1049050:CDS
GATGGTCTCAAAGACAAAAT+CGG 0.478151 7_2:+11886130 None:intergenic
TCAGAAACAAAGCAAGTAAC+CGG 0.482231 7_2:+11885960 None:intergenic
TCTTGAATGGCTTGAATCAA+AGG 0.484419 7_2:-11884821 Msa1049050:CDS
ACCGTCGAAAGTGTACTTGC+TGG 0.485586 7_2:-11884526 Msa1049050:CDS
GGATCTACCTGACGTAATAA+GGG 0.494934 7_2:-11885082 Msa1049050:CDS
TTGAACCACCCTTCAATTGG+TGG 0.497309 7_2:-11884577 Msa1049050:CDS
AGGCCTGATCTTGTCATTGG+CGG 0.501968 7_2:-11884682 Msa1049050:CDS
TTAGAATTTGTCATTGAAGT+GGG 0.502488 7_2:-11885036 Msa1049050:CDS
AACCTCTTGATTTAAGCAAA+CGG 0.503323 7_2:+11886174 None:intergenic
TTCAAGCCATTCAAGACACT+TGG 0.503510 7_2:+11884828 None:intergenic
ACATCACCATTACCTTCCAT+TGG 0.505333 7_2:+11886092 None:intergenic
GTCTTTGAGACCATCCAAGA+TGG 0.507826 7_2:-11886122 Msa1049050:CDS
TGATTTAGTAATGAAGGTAA+AGG 0.512922 7_2:+11884904 None:intergenic
GTCAAGAATCCACCAATTGA+AGG 0.516692 7_2:+11884568 None:intergenic
AAGATACCAAGTGTCTTGAA+TGG 0.518079 7_2:-11884834 Msa1049050:CDS
CTTCATGACTCTGCGAATGC+TGG 0.521910 7_2:-11885993 Msa1049050:CDS
AACCGTTTGCTTAAATCAAG+AGG 0.522168 7_2:-11886176 Msa1049050:CDS
GAGATAAAGGAAAGAAGATG+AGG 0.528414 7_2:-11884360 Msa1049050:CDS
AAGAAGTTACATGCACTAGT+TGG 0.534801 7_2:+11885873 None:intergenic
TTTAGAATTTGTCATTGAAG+TGG 0.535263 7_2:-11885037 Msa1049050:CDS
CTGGAGTGCCAATGTTGTGT+TGG 0.538075 7_2:-11884507 Msa1049050:CDS
GAGAAAGAGATTTCAGATAG+AGG 0.538164 7_2:-11884634 Msa1049050:CDS
CACTAGTTGGTGAAAAGAGA+AGG 0.540423 7_2:+11885886 None:intergenic
TGGTTGTTCATACATGAACT+TGG 0.545987 7_2:-11884287 Msa1049050:CDS
TCAAAATCCACATAGTAACT+TGG 0.546302 7_2:-11884884 Msa1049050:CDS
CTGATCAATGAATTGATGGT+AGG 0.553651 7_2:-11884382 Msa1049050:CDS
CTAACTCCAATGGAAGGTAA+TGG 0.556057 7_2:-11886098 Msa1049050:CDS
CTAGCAAGAAGTTCACCAAA+GGG 0.558966 7_2:+11886017 None:intergenic
TCTGCAACCCTTATTACGTC+AGG 0.561278 7_2:+11885075 None:intergenic
GCGGAAGAGAACACCAGTAT+CGG 0.561831 7_2:-11884310 Msa1049050:CDS
TGGTTCAATACTTGCTCTTG+AGG 0.562260 7_2:+11884592 None:intergenic
CCAAGATGGTCTAACTCCAA+TGG 0.563528 7_2:-11886108 Msa1049050:CDS
GTCCAATGGTATATAATGAA+GGG 0.565622 7_2:+11884926 None:intergenic
TCCAGCAAGTACACTTTCGA+CGG 0.568347 7_2:+11884525 None:intergenic
GGATTTATATGACCTTGAAG+TGG 0.570275 7_2:+11886272 None:intergenic
GATTCTTGACTCATTGTGGA+TGG 0.573721 7_2:-11884555 Msa1049050:CDS
ATTGTATTCGGTATTGACAA+AGG 0.577665 7_2:+11886202 None:intergenic
GAATGCTGGTCTTACGCCAC+CGG 0.579224 7_2:-11885979 Msa1049050:CDS
TGCAAATGATTACCTTTGAG+CGG 0.581624 7_2:+11885807 None:intergenic
TAATGAAGGTAAAGGTCCAA+TGG 0.584631 7_2:+11884912 None:intergenic
GGTGGATTCTTGACTCATTG+TGG 0.591311 7_2:-11884559 Msa1049050:CDS
TTTCGTACAATGTTTGACAA+AGG 0.592549 7_2:-11885837 Msa1049050:CDS
CTCACATAAACAACAGACTC+AGG 0.592864 7_2:+11884796 None:intergenic
TTGGTGAAAAGAGAAGGATT+GGG 0.592979 7_2:+11885892 None:intergenic
TCAAGAATCCACCAATTGAA+GGG 0.598039 7_2:+11884569 None:intergenic
GATGGTCTAACTCCAATGGA+AGG 0.600300 7_2:-11886104 Msa1049050:CDS
AAAGATGCCAAGTTACTATG+TGG 0.604877 7_2:+11884877 None:intergenic
TGGAGTTAGACCATCTTGGA+TGG 0.607818 7_2:+11886112 None:intergenic
TATGGAATCAACACAGCATG+TGG 0.608170 7_2:+11886296 None:intergenic
CTTGGACAAGGTTATTAAGG+AGG 0.609792 7_2:-11884269 Msa1049050:CDS
CGATACTAATGTGAAGAGAG+AGG 0.613823 7_2:-11884416 Msa1049050:CDS
CAACTATTAGAGTTTGCTTG+GGG 0.615090 7_2:-11884742 Msa1049050:CDS
ATAGAGGTCTAATTGCAAGC+TGG 0.620216 7_2:-11884618 Msa1049050:CDS
AAAGGTCTAATACCGCTCAA+AGG 0.620948 7_2:-11885819 Msa1049050:intron
TTCATACATGAACTTGGACA+AGG 0.628136 7_2:-11884281 Msa1049050:CDS
TCTAGCAAGAAGTTCACCAA+AGG 0.630305 7_2:+11886016 None:intergenic
TAGTTGCTCTGGAGTCATGA+CGG 0.645295 7_2:+11884759 None:intergenic
CGTAGAGTTAAGGAAGAAAG+CGG 0.645725 7_2:-11884329 Msa1049050:CDS
GAAGAGAACACCAGTATCGG+TGG 0.672004 7_2:-11884307 Msa1049050:CDS
TACTAATGTGAAGAGAGAGG+AGG 0.681397 7_2:-11884413 Msa1049050:CDS
AGAATCCACCAATTGAAGGG+TGG 0.687311 7_2:+11884572 None:intergenic
AGTGTTAAAGATGATAGCAG+AGG 0.689062 7_2:+11884996 None:intergenic
GAAACAAAGCAAGTAACCGG+TGG 0.712010 7_2:+11885963 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGAGAACTTTTAATTTGA+CGG - chr7_2:11885108-11885127 Msa1049050:intron 20.0%
!!! TCAATGACAAATTCTAAAAT+GGG + chr7_2:11885530-11885549 None:intergenic 20.0%
!!! TTCAATGACAAATTCTAAAA+TGG + chr7_2:11885531-11885550 None:intergenic 20.0%
!! CAGATATATCTACAATTTAT+TGG + chr7_2:11886106-11886125 None:intergenic 20.0%
!! TAGATATATCTGCAATATAT+GGG - chr7_2:11886114-11886133 Msa1049050:CDS 20.0%
!!! AATGAGAACTTTTAATTTGA+CGG - chr7_2:11885108-11885127 Msa1049050:intron 20.0%
!!! TCAATGACAAATTCTAAAAT+GGG + chr7_2:11885530-11885549 None:intergenic 20.0%
!!! TTCAATGACAAATTCTAAAA+TGG + chr7_2:11885531-11885550 None:intergenic 20.0%
!! CAGATATATCTACAATTTAT+TGG + chr7_2:11886106-11886125 None:intergenic 20.0%
!! TAGATATATCTGCAATATAT+GGG - chr7_2:11886114-11886133 Msa1049050:CDS 20.0%
!!! AGTTTTGCTAGTTTTAACAA+TGG + chr7_2:11884321-11884340 None:intergenic 25.0%
!!! ATTGATAATGACTCATTAAC+CGG - chr7_2:11885151-11885170 Msa1049050:intron 25.0%
!! TTTAGAATTTGTCATTGAAG+TGG - chr7_2:11885532-11885551 Msa1049050:intron 25.0%
! TTAGAATTTGTCATTGAAGT+GGG - chr7_2:11885533-11885552 Msa1049050:intron 25.0%
! TGATTTAGTAATGAAGGTAA+AGG + chr7_2:11885668-11885687 None:intergenic 25.0%
!!! GGATTTTGATTTAGTAATGA+AGG + chr7_2:11885674-11885693 None:intergenic 25.0%
! AAACTCAGATGACATAATAA+AGG + chr7_2:11885915-11885934 None:intergenic 25.0%
! GTAGATATATCTGCAATATA+TGG - chr7_2:11886113-11886132 Msa1049050:CDS 25.0%
!!! AGTTTTGCTAGTTTTAACAA+TGG + chr7_2:11884321-11884340 None:intergenic 25.0%
!!! ATTGATAATGACTCATTAAC+CGG - chr7_2:11885151-11885170 Msa1049050:intron 25.0%
!! TTTAGAATTTGTCATTGAAG+TGG - chr7_2:11885532-11885551 Msa1049050:intron 25.0%
! TTAGAATTTGTCATTGAAGT+GGG - chr7_2:11885533-11885552 Msa1049050:intron 25.0%
! TGATTTAGTAATGAAGGTAA+AGG + chr7_2:11885668-11885687 None:intergenic 25.0%
!!! GGATTTTGATTTAGTAATGA+AGG + chr7_2:11885674-11885693 None:intergenic 25.0%
! AAACTCAGATGACATAATAA+AGG + chr7_2:11885915-11885934 None:intergenic 25.0%
! GTAGATATATCTGCAATATA+TGG - chr7_2:11886113-11886132 Msa1049050:CDS 25.0%
!! ATTGTATTCGGTATTGACAA+AGG + chr7_2:11884370-11884389 None:intergenic 30.0%
AACCTCTTGATTTAAGCAAA+CGG + chr7_2:11884398-11884417 None:intergenic 30.0%
TTTCGTACAATGTTTGACAA+AGG - chr7_2:11884732-11884751 Msa1049050:CDS 30.0%
!!! AGAACTTTTAATTTGACGGT+TGG - chr7_2:11885112-11885131 Msa1049050:intron 30.0%
TTCCCTTCATTATATACCAT+TGG - chr7_2:11885641-11885660 Msa1049050:intron 30.0%
GTCCAATGGTATATAATGAA+GGG + chr7_2:11885646-11885665 None:intergenic 30.0%
TCAAAATCCACATAGTAACT+TGG - chr7_2:11885685-11885704 Msa1049050:intron 30.0%
! CATCTTTAGGTTCAAATCTT+TGG - chr7_2:11885708-11885727 Msa1049050:intron 30.0%
!! TCTGTTGTTTATGTGAGTTT+TGG - chr7_2:11885779-11885798 Msa1049050:intron 30.0%
ATTGGTTGATCACCAAAAAA+TGG + chr7_2:11886088-11886107 None:intergenic 30.0%
!! ATTGTATTCGGTATTGACAA+AGG + chr7_2:11884370-11884389 None:intergenic 30.0%
AACCTCTTGATTTAAGCAAA+CGG + chr7_2:11884398-11884417 None:intergenic 30.0%
TTTCGTACAATGTTTGACAA+AGG - chr7_2:11884732-11884751 Msa1049050:CDS 30.0%
!!! AGAACTTTTAATTTGACGGT+TGG - chr7_2:11885112-11885131 Msa1049050:intron 30.0%
TTCCCTTCATTATATACCAT+TGG - chr7_2:11885641-11885660 Msa1049050:intron 30.0%
GTCCAATGGTATATAATGAA+GGG + chr7_2:11885646-11885665 None:intergenic 30.0%
TCAAAATCCACATAGTAACT+TGG - chr7_2:11885685-11885704 Msa1049050:intron 30.0%
! CATCTTTAGGTTCAAATCTT+TGG - chr7_2:11885708-11885727 Msa1049050:intron 30.0%
!! TCTGTTGTTTATGTGAGTTT+TGG - chr7_2:11885779-11885798 Msa1049050:intron 30.0%
ATTGGTTGATCACCAAAAAA+TGG + chr7_2:11886088-11886107 None:intergenic 30.0%
TTGATTCCATATCCACTTCA+AGG - chr7_2:11884285-11884304 Msa1049050:CDS 35.0%
ATATGACCTTGAAGTGGATA+TGG + chr7_2:11884294-11884313 None:intergenic 35.0%
GGATTTATATGACCTTGAAG+TGG + chr7_2:11884300-11884319 None:intergenic 35.0%
GCAAAACTTCTTCACCTTAA+AGG - chr7_2:11884333-11884352 Msa1049050:CDS 35.0%
AGGTTATGTGAAAGCCTTTA+AGG + chr7_2:11884350-11884369 None:intergenic 35.0%
CAAACGGTTGTGATTGTATT+CGG + chr7_2:11884382-11884401 None:intergenic 35.0%
AACCGTTTGCTTAAATCAAG+AGG - chr7_2:11884393-11884412 Msa1049050:CDS 35.0%
! AGAGGTTCTAATTCTCTTGA+TGG - chr7_2:11884411-11884430 Msa1049050:CDS 35.0%
GATGGTCTCAAAGACAAAAT+CGG + chr7_2:11884442-11884461 None:intergenic 35.0%
AAGAACTTCATCAAACCCTT+TGG - chr7_2:11884537-11884556 Msa1049050:CDS 35.0%
TCAGAAACAAAGCAAGTAAC+CGG + chr7_2:11884612-11884631 None:intergenic 35.0%
TCAGCAACTTGTATGGTAAA+TGG + chr7_2:11884645-11884664 None:intergenic 35.0%
ATTCTCTTCAGCAACTTGTA+TGG + chr7_2:11884652-11884671 None:intergenic 35.0%
TTGGTGAAAAGAGAAGGATT+GGG + chr7_2:11884680-11884699 None:intergenic 35.0%
AAGAAGTTACATGCACTAGT+TGG + chr7_2:11884699-11884718 None:intergenic 35.0%
TGTCAAACATTGTACGAAAG+TGG + chr7_2:11884731-11884750 None:intergenic 35.0%
TGCAAATGATTACCTTTGAG+CGG + chr7_2:11884765-11884784 None:intergenic 35.0%
CAACTCGTCAAATTGCTATA+AGG + chr7_2:11885080-11885099 None:intergenic 35.0%
GTAATATTGAGTAGAGTCAC+CGG + chr7_2:11885173-11885192 None:intergenic 35.0%
TGAGTCTCGTCAAATTATGT+GGG + chr7_2:11885314-11885333 None:intergenic 35.0%
ATGAGTCTCGTCAAATTATG+TGG + chr7_2:11885315-11885334 None:intergenic 35.0%
!! AAAGAAGTCAATAGCTTGCT+AGG + chr7_2:11885388-11885407 None:intergenic 35.0%
ATTGCAGAACTTTCGATTGA+AGG - chr7_2:11885466-11885485 Msa1049050:intron 35.0%
AGTGTTAAAGATGATAGCAG+AGG + chr7_2:11885576-11885595 None:intergenic 35.0%
GGTCCAATGGTATATAATGA+AGG + chr7_2:11885647-11885666 None:intergenic 35.0%
TAATGAAGGTAAAGGTCCAA+TGG + chr7_2:11885660-11885679 None:intergenic 35.0%
AAAGATGCCAAGTTACTATG+TGG + chr7_2:11885695-11885714 None:intergenic 35.0%
CATAGTAACTTGGCATCTTT+AGG - chr7_2:11885695-11885714 Msa1049050:intron 35.0%
AAGATACCAAGTGTCTTGAA+TGG - chr7_2:11885735-11885754 Msa1049050:intron 35.0%
TCTTGAATGGCTTGAATCAA+AGG - chr7_2:11885748-11885767 Msa1049050:intron 35.0%
! AGCAACTATTAGAGTTTGCT+TGG - chr7_2:11885825-11885844 Msa1049050:CDS 35.0%
! GCAACTATTAGAGTTTGCTT+GGG - chr7_2:11885826-11885845 Msa1049050:CDS 35.0%
! CAACTATTAGAGTTTGCTTG+GGG - chr7_2:11885827-11885846 Msa1049050:CDS 35.0%
! CAAAAAGGGTTTCTTGCTAT+TGG + chr7_2:11885858-11885877 None:intergenic 35.0%
! ATAGCAAGAAACCCTTTTTG+TGG - chr7_2:11885858-11885877 Msa1049050:CDS 35.0%
! AACCCTTTTTGTGGATCATT+AGG - chr7_2:11885867-11885886 Msa1049050:CDS 35.0%
GAGAAAGAGATTTCAGATAG+AGG - chr7_2:11885935-11885954 Msa1049050:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG + chr7_2:11886003-11886022 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+TGG + chr7_2:11886073-11886092 None:intergenic 35.0%
!!! ATGTTGTGTTGGCCATTTTT+TGG - chr7_2:11886073-11886092 Msa1049050:CDS 35.0%
ATCTGCAATATATGGGAGAT+TGG - chr7_2:11886121-11886140 Msa1049050:CDS 35.0%
GAAGCTGATCAATGAATTGA+TGG - chr7_2:11886183-11886202 Msa1049050:CDS 35.0%
! CTGATCAATGAATTGATGGT+AGG - chr7_2:11886187-11886206 Msa1049050:CDS 35.0%
! GAATTGATGGTAGGAGATAA+AGG - chr7_2:11886196-11886215 Msa1049050:CDS 35.0%
GAGATAAAGGAAAGAAGATG+AGG - chr7_2:11886209-11886228 Msa1049050:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG - chr7_2:11886282-11886301 Msa1049050:CDS 35.0%
TTCATACATGAACTTGGACA+AGG - chr7_2:11886288-11886307 Msa1049050:CDS 35.0%
GAACTTGGACAAGGTTATTA+AGG - chr7_2:11886297-11886316 Msa1049050:CDS 35.0%
TTGATTCCATATCCACTTCA+AGG - chr7_2:11884285-11884304 Msa1049050:CDS 35.0%
ATATGACCTTGAAGTGGATA+TGG + chr7_2:11884294-11884313 None:intergenic 35.0%
GGATTTATATGACCTTGAAG+TGG + chr7_2:11884300-11884319 None:intergenic 35.0%
GCAAAACTTCTTCACCTTAA+AGG - chr7_2:11884333-11884352 Msa1049050:CDS 35.0%
AGGTTATGTGAAAGCCTTTA+AGG + chr7_2:11884350-11884369 None:intergenic 35.0%
CAAACGGTTGTGATTGTATT+CGG + chr7_2:11884382-11884401 None:intergenic 35.0%
AACCGTTTGCTTAAATCAAG+AGG - chr7_2:11884393-11884412 Msa1049050:CDS 35.0%
! AGAGGTTCTAATTCTCTTGA+TGG - chr7_2:11884411-11884430 Msa1049050:CDS 35.0%
GATGGTCTCAAAGACAAAAT+CGG + chr7_2:11884442-11884461 None:intergenic 35.0%
AAGAACTTCATCAAACCCTT+TGG - chr7_2:11884537-11884556 Msa1049050:CDS 35.0%
TCAGAAACAAAGCAAGTAAC+CGG + chr7_2:11884612-11884631 None:intergenic 35.0%
TCAGCAACTTGTATGGTAAA+TGG + chr7_2:11884645-11884664 None:intergenic 35.0%
ATTCTCTTCAGCAACTTGTA+TGG + chr7_2:11884652-11884671 None:intergenic 35.0%
TTGGTGAAAAGAGAAGGATT+GGG + chr7_2:11884680-11884699 None:intergenic 35.0%
AAGAAGTTACATGCACTAGT+TGG + chr7_2:11884699-11884718 None:intergenic 35.0%
TGTCAAACATTGTACGAAAG+TGG + chr7_2:11884731-11884750 None:intergenic 35.0%
TGCAAATGATTACCTTTGAG+CGG + chr7_2:11884765-11884784 None:intergenic 35.0%
CAACTCGTCAAATTGCTATA+AGG + chr7_2:11885080-11885099 None:intergenic 35.0%
GTAATATTGAGTAGAGTCAC+CGG + chr7_2:11885173-11885192 None:intergenic 35.0%
TGAGTCTCGTCAAATTATGT+GGG + chr7_2:11885314-11885333 None:intergenic 35.0%
ATGAGTCTCGTCAAATTATG+TGG + chr7_2:11885315-11885334 None:intergenic 35.0%
!! AAAGAAGTCAATAGCTTGCT+AGG + chr7_2:11885388-11885407 None:intergenic 35.0%
ATTGCAGAACTTTCGATTGA+AGG - chr7_2:11885466-11885485 Msa1049050:intron 35.0%
AGTGTTAAAGATGATAGCAG+AGG + chr7_2:11885576-11885595 None:intergenic 35.0%
GGTCCAATGGTATATAATGA+AGG + chr7_2:11885647-11885666 None:intergenic 35.0%
TAATGAAGGTAAAGGTCCAA+TGG + chr7_2:11885660-11885679 None:intergenic 35.0%
AAAGATGCCAAGTTACTATG+TGG + chr7_2:11885695-11885714 None:intergenic 35.0%
CATAGTAACTTGGCATCTTT+AGG - chr7_2:11885695-11885714 Msa1049050:intron 35.0%
AAGATACCAAGTGTCTTGAA+TGG - chr7_2:11885735-11885754 Msa1049050:intron 35.0%
TCTTGAATGGCTTGAATCAA+AGG - chr7_2:11885748-11885767 Msa1049050:intron 35.0%
! AGCAACTATTAGAGTTTGCT+TGG - chr7_2:11885825-11885844 Msa1049050:CDS 35.0%
! GCAACTATTAGAGTTTGCTT+GGG - chr7_2:11885826-11885845 Msa1049050:CDS 35.0%
! CAACTATTAGAGTTTGCTTG+GGG - chr7_2:11885827-11885846 Msa1049050:CDS 35.0%
! CAAAAAGGGTTTCTTGCTAT+TGG + chr7_2:11885858-11885877 None:intergenic 35.0%
! ATAGCAAGAAACCCTTTTTG+TGG - chr7_2:11885858-11885877 Msa1049050:CDS 35.0%
! AACCCTTTTTGTGGATCATT+AGG - chr7_2:11885867-11885886 Msa1049050:CDS 35.0%
GAGAAAGAGATTTCAGATAG+AGG - chr7_2:11885935-11885954 Msa1049050:CDS 35.0%
TCAAGAATCCACCAATTGAA+GGG + chr7_2:11886003-11886022 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+TGG + chr7_2:11886073-11886092 None:intergenic 35.0%
!!! ATGTTGTGTTGGCCATTTTT+TGG - chr7_2:11886073-11886092 Msa1049050:CDS 35.0%
ATCTGCAATATATGGGAGAT+TGG - chr7_2:11886121-11886140 Msa1049050:CDS 35.0%
GAAGCTGATCAATGAATTGA+TGG - chr7_2:11886183-11886202 Msa1049050:CDS 35.0%
! CTGATCAATGAATTGATGGT+AGG - chr7_2:11886187-11886206 Msa1049050:CDS 35.0%
! GAATTGATGGTAGGAGATAA+AGG - chr7_2:11886196-11886215 Msa1049050:CDS 35.0%
GAGATAAAGGAAAGAAGATG+AGG - chr7_2:11886209-11886228 Msa1049050:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG - chr7_2:11886282-11886301 Msa1049050:CDS 35.0%
TTCATACATGAACTTGGACA+AGG - chr7_2:11886288-11886307 Msa1049050:CDS 35.0%
GAACTTGGACAAGGTTATTA+AGG - chr7_2:11886297-11886316 Msa1049050:CDS 35.0%
TATGGAATCAACACAGCATG+TGG + chr7_2:11884276-11884295 None:intergenic 40.0%
CTAACTCCAATGGAAGGTAA+TGG - chr7_2:11884471-11884490 Msa1049050:CDS 40.0%
ACATCACCATTACCTTCCAT+TGG + chr7_2:11884480-11884499 None:intergenic 40.0%
CTAGCAAGAAGTTCACCAAA+GGG + chr7_2:11884555-11884574 None:intergenic 40.0%
TCTAGCAAGAAGTTCACCAA+AGG + chr7_2:11884556-11884575 None:intergenic 40.0%
! GTTGGTGAAAAGAGAAGGAT+TGG + chr7_2:11884681-11884700 None:intergenic 40.0%
!! CACTAGTTGGTGAAAAGAGA+AGG + chr7_2:11884686-11884705 None:intergenic 40.0%
AAAGGTCTAATACCGCTCAA+AGG - chr7_2:11884750-11884769 Msa1049050:CDS 40.0%
TCCTGGAATACAGTCTACTT+TGG + chr7_2:11885447-11885466 None:intergenic 40.0%
AATCGAAAGTTCTGCAATCC+TGG + chr7_2:11885464-11885483 None:intergenic 40.0%
AGGATCTACCTGACGTAATA+AGG - chr7_2:11885486-11885505 Msa1049050:intron 40.0%
GGATCTACCTGACGTAATAA+GGG - chr7_2:11885487-11885506 Msa1049050:intron 40.0%
TTCAAGCCATTCAAGACACT+TGG + chr7_2:11885744-11885763 None:intergenic 40.0%
CTCACATAAACAACAGACTC+AGG + chr7_2:11885776-11885795 None:intergenic 40.0%
GCAAACTCTAATAGTTGCTC+TGG + chr7_2:11885824-11885843 None:intergenic 40.0%
GGCCTAATGATCCACAAAAA+GGG + chr7_2:11885872-11885891 None:intergenic 40.0%
AGGCCTAATGATCCACAAAA+AGG + chr7_2:11885873-11885892 None:intergenic 40.0%
ATTAGGCCTGATCTTGTCAT+TGG - chr7_2:11885884-11885903 Msa1049050:CDS 40.0%
ATAGAGGTCTAATTGCAAGC+TGG - chr7_2:11885951-11885970 Msa1049050:CDS 40.0%
TGGTTCAATACTTGCTCTTG+AGG + chr7_2:11885980-11885999 None:intergenic 40.0%
GTATTGAACCACCCTTCAAT+TGG - chr7_2:11885989-11886008 Msa1049050:CDS 40.0%
GTCAAGAATCCACCAATTGA+AGG + chr7_2:11886004-11886023 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr7_2:11886014-11886033 Msa1049050:CDS 40.0%
CGATACTAATGTGAAGAGAG+AGG - chr7_2:11886153-11886172 Msa1049050:CDS 40.0%
TACTAATGTGAAGAGAGAGG+AGG - chr7_2:11886156-11886175 Msa1049050:CDS 40.0%
CGCTTTCTTCCTTAACTCTA+CGG + chr7_2:11886242-11886261 None:intergenic 40.0%
CGTAGAGTTAAGGAAGAAAG+CGG - chr7_2:11886240-11886259 Msa1049050:CDS 40.0%
CTTGGACAAGGTTATTAAGG+AGG - chr7_2:11886300-11886319 Msa1049050:CDS 40.0%
TATGGAATCAACACAGCATG+TGG + chr7_2:11884276-11884295 None:intergenic 40.0%
CTAACTCCAATGGAAGGTAA+TGG - chr7_2:11884471-11884490 Msa1049050:CDS 40.0%
ACATCACCATTACCTTCCAT+TGG + chr7_2:11884480-11884499 None:intergenic 40.0%
CTAGCAAGAAGTTCACCAAA+GGG + chr7_2:11884555-11884574 None:intergenic 40.0%
TCTAGCAAGAAGTTCACCAA+AGG + chr7_2:11884556-11884575 None:intergenic 40.0%
! GTTGGTGAAAAGAGAAGGAT+TGG + chr7_2:11884681-11884700 None:intergenic 40.0%
!! CACTAGTTGGTGAAAAGAGA+AGG + chr7_2:11884686-11884705 None:intergenic 40.0%
AAAGGTCTAATACCGCTCAA+AGG - chr7_2:11884750-11884769 Msa1049050:CDS 40.0%
TCCTGGAATACAGTCTACTT+TGG + chr7_2:11885447-11885466 None:intergenic 40.0%
AATCGAAAGTTCTGCAATCC+TGG + chr7_2:11885464-11885483 None:intergenic 40.0%
AGGATCTACCTGACGTAATA+AGG - chr7_2:11885486-11885505 Msa1049050:intron 40.0%
GGATCTACCTGACGTAATAA+GGG - chr7_2:11885487-11885506 Msa1049050:intron 40.0%
TTCAAGCCATTCAAGACACT+TGG + chr7_2:11885744-11885763 None:intergenic 40.0%
CTCACATAAACAACAGACTC+AGG + chr7_2:11885776-11885795 None:intergenic 40.0%
GCAAACTCTAATAGTTGCTC+TGG + chr7_2:11885824-11885843 None:intergenic 40.0%
GGCCTAATGATCCACAAAAA+GGG + chr7_2:11885872-11885891 None:intergenic 40.0%
AGGCCTAATGATCCACAAAA+AGG + chr7_2:11885873-11885892 None:intergenic 40.0%
ATTAGGCCTGATCTTGTCAT+TGG - chr7_2:11885884-11885903 Msa1049050:CDS 40.0%
ATAGAGGTCTAATTGCAAGC+TGG - chr7_2:11885951-11885970 Msa1049050:CDS 40.0%
TGGTTCAATACTTGCTCTTG+AGG + chr7_2:11885980-11885999 None:intergenic 40.0%
GTATTGAACCACCCTTCAAT+TGG - chr7_2:11885989-11886008 Msa1049050:CDS 40.0%
GTCAAGAATCCACCAATTGA+AGG + chr7_2:11886004-11886023 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr7_2:11886014-11886033 Msa1049050:CDS 40.0%
CGATACTAATGTGAAGAGAG+AGG - chr7_2:11886153-11886172 Msa1049050:CDS 40.0%
TACTAATGTGAAGAGAGAGG+AGG - chr7_2:11886156-11886175 Msa1049050:CDS 40.0%
CGCTTTCTTCCTTAACTCTA+CGG + chr7_2:11886242-11886261 None:intergenic 40.0%
CGTAGAGTTAAGGAAGAAAG+CGG - chr7_2:11886240-11886259 Msa1049050:CDS 40.0%
CTTGGACAAGGTTATTAAGG+AGG - chr7_2:11886300-11886319 Msa1049050:CDS 40.0%
!! GTCTTTGAGACCATCCAAGA+TGG - chr7_2:11884447-11884466 Msa1049050:CDS 45.0%
TGGAGTTAGACCATCTTGGA+TGG + chr7_2:11884460-11884479 None:intergenic 45.0%
CCATTGGAGTTAGACCATCT+TGG + chr7_2:11884464-11884483 None:intergenic 45.0%
CCAAGATGGTCTAACTCCAA+TGG - chr7_2:11884461-11884480 Msa1049050:CDS 45.0%
GATGGTCTAACTCCAATGGA+AGG - chr7_2:11884465-11884484 Msa1049050:CDS 45.0%
GAAACAAAGCAAGTAACCGG+TGG + chr7_2:11884609-11884628 None:intergenic 45.0%
GCCAAAGTAGACTGTATTCC+AGG - chr7_2:11885443-11885462 Msa1049050:intron 45.0%
TCTGCAACCCTTATTACGTC+AGG + chr7_2:11885497-11885516 None:intergenic 45.0%
!! TAGTTGCTCTGGAGTCATGA+CGG + chr7_2:11885813-11885832 None:intergenic 45.0%
! ATTAGAGTTTGCTTGGGGTC+TGG - chr7_2:11885832-11885851 Msa1049050:CDS 45.0%
TTGAACCACCCTTCAATTGG+TGG - chr7_2:11885992-11886011 Msa1049050:CDS 45.0%
AGAATCCACCAATTGAAGGG+TGG + chr7_2:11886000-11886019 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr7_2:11886010-11886029 Msa1049050:CDS 45.0%
TCCAGCAAGTACACTTTCGA+CGG + chr7_2:11886047-11886066 None:intergenic 45.0%
GGCAAAATGCCGTAGAGTTA+AGG - chr7_2:11886230-11886249 Msa1049050:CDS 45.0%
GTATGAACAACCACCGATAC+TGG + chr7_2:11886275-11886294 None:intergenic 45.0%
!! GTCTTTGAGACCATCCAAGA+TGG - chr7_2:11884447-11884466 Msa1049050:CDS 45.0%
TGGAGTTAGACCATCTTGGA+TGG + chr7_2:11884460-11884479 None:intergenic 45.0%
CCATTGGAGTTAGACCATCT+TGG + chr7_2:11884464-11884483 None:intergenic 45.0%
CCAAGATGGTCTAACTCCAA+TGG - chr7_2:11884461-11884480 Msa1049050:CDS 45.0%
GATGGTCTAACTCCAATGGA+AGG - chr7_2:11884465-11884484 Msa1049050:CDS 45.0%
GAAACAAAGCAAGTAACCGG+TGG + chr7_2:11884609-11884628 None:intergenic 45.0%
GCCAAAGTAGACTGTATTCC+AGG - chr7_2:11885443-11885462 Msa1049050:intron 45.0%
TCTGCAACCCTTATTACGTC+AGG + chr7_2:11885497-11885516 None:intergenic 45.0%
!! TAGTTGCTCTGGAGTCATGA+CGG + chr7_2:11885813-11885832 None:intergenic 45.0%
! ATTAGAGTTTGCTTGGGGTC+TGG - chr7_2:11885832-11885851 Msa1049050:CDS 45.0%
TTGAACCACCCTTCAATTGG+TGG - chr7_2:11885992-11886011 Msa1049050:CDS 45.0%
AGAATCCACCAATTGAAGGG+TGG + chr7_2:11886000-11886019 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr7_2:11886010-11886029 Msa1049050:CDS 45.0%
TCCAGCAAGTACACTTTCGA+CGG + chr7_2:11886047-11886066 None:intergenic 45.0%
GGCAAAATGCCGTAGAGTTA+AGG - chr7_2:11886230-11886249 Msa1049050:CDS 45.0%
GTATGAACAACCACCGATAC+TGG + chr7_2:11886275-11886294 None:intergenic 45.0%
CTTCATGACTCTGCGAATGC+TGG - chr7_2:11884576-11884595 Msa1049050:CDS 50.0%
AGGCCTGATCTTGTCATTGG+CGG - chr7_2:11885887-11885906 Msa1049050:CDS 50.0%
! ACCGTCGAAAGTGTACTTGC+TGG - chr7_2:11886043-11886062 Msa1049050:CDS 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG - chr7_2:11886062-11886081 Msa1049050:CDS 50.0%
GCGGAAGAGAACACCAGTAT+CGG - chr7_2:11886259-11886278 Msa1049050:CDS 50.0%
! GAAGAGAACACCAGTATCGG+TGG - chr7_2:11886262-11886281 Msa1049050:CDS 50.0%
CTTCATGACTCTGCGAATGC+TGG - chr7_2:11884576-11884595 Msa1049050:CDS 50.0%
AGGCCTGATCTTGTCATTGG+CGG - chr7_2:11885887-11885906 Msa1049050:CDS 50.0%
! ACCGTCGAAAGTGTACTTGC+TGG - chr7_2:11886043-11886062 Msa1049050:CDS 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG - chr7_2:11886062-11886081 Msa1049050:CDS 50.0%
GCGGAAGAGAACACCAGTAT+CGG - chr7_2:11886259-11886278 Msa1049050:CDS 50.0%
! GAAGAGAACACCAGTATCGG+TGG - chr7_2:11886262-11886281 Msa1049050:CDS 50.0%
!! GAATGCTGGTCTTACGCCAC+CGG - chr7_2:11884590-11884609 Msa1049050:CDS 55.0%
GAGCCGCCAATGACAAGATC+AGG + chr7_2:11885893-11885912 None:intergenic 55.0%
!! GAATGCTGGTCTTACGCCAC+CGG - chr7_2:11884590-11884609 Msa1049050:CDS 55.0%
GAGCCGCCAATGACAAGATC+AGG + chr7_2:11885893-11885912 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 11884249 11886342 11884249 ID=Msa1049050;Name=Msa1049050
chr7_2 mRNA 11884249 11886342 11884249 ID=Msa1049050-mRNA-1;Parent=Msa1049050;Name=Msa1049050-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|466
chr7_2 exon 11885820 11886342 11885820 ID=Msa1049050-mRNA-1:exon:2968;Parent=Msa1049050-mRNA-1
chr7_2 exon 11884249 11885126 11884249 ID=Msa1049050-mRNA-1:exon:2967;Parent=Msa1049050-mRNA-1
chr7_2 CDS 11885820 11886342 11885820 ID=Msa1049050-mRNA-1:cds;Parent=Msa1049050-mRNA-1
chr7_2 CDS 11884249 11885126 11884249 ID=Msa1049050-mRNA-1:cds;Parent=Msa1049050-mRNA-1
Gene Sequence

>Msa1049050

ATGAGTTACATTGTTAATAAAAAGCCACATGCTGTGTTGATTCCATATCCACTTCAAGGTCATATAAATCCATTGTTAAAACTAGCAAAACTTCTTCACCTTAAAGGCTTTCACATAACCTTTGTCAATACCGAATACAATCACAACCGTTTGCTTAAATCAAGAGGTTCTAATTCTCTTGATGGTTTCACCGATTTTGTCTTTGAGACCATCCAAGATGGTCTAACTCCAATGGAAGGTAATGGTGATGTTAGTCAAGACTTGACATCTCTTTCTCAATCTGTTAGTAAGAACTTCATCAAACCCTTTGGTGAACTTCTTGCTAGACTTCATGACTCTGCGAATGCTGGTCTTACGCCACCGGTTACTTGCTTTGTTTCTGATTGTTACATGCCATTTACCATACAAGTTGCTGAAGAGAATGCACTCCCAATCCTTCTCTTTTCACCAACTAGTGCATGTAACTTCTTAACTACTTTCCACTTTCGTACAATGTTTGACAAAGGTCTAATACCGCTCAAAGGATTGCAGAACTTTCGATTGAAGGATCTACCTGACGTAATAAGGGTTGCAGATCGTAAAGATCCCATTTTAGAATTTGTCATTGAAGTGGGAGATAGCTTTCACAAAGCCTCTGCTATCATCTTTAACACTTATGATGAACTCGAGAGTGATGTAATGAATGCACTATATTATGTGTTCCCTTCATTATATACCATTGGACCTTTACCTTCATTACTAAATCAAAATCCACATAGTAACTTGGCATCTTTAGGTTCAAATCTTTGGAAAGAAGATACCAAGTGTCTTGAATGGCTTGAATCAAAGGAACCTGAGTCTGTTGTTTATGTGAGTTTTGGCAGCATTACCGTCATGACTCCAGAGCAACTATTAGAGTTTGCTTGGGGTCTGGCCAATAGCAAGAAACCCTTTTTGTGGATCATTAGGCCTGATCTTGTCATTGGCGGCTCCTTTATTATGTCATCTGAGTTTGAGAAAGAGATTTCAGATAGAGGTCTAATTGCAAGCTGGTGTCCTCAAGAGCAAGTATTGAACCACCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCGTCGAAAGTGTACTTGCTGGAGTGCCAATGTTGTGTTGGCCATTTTTTGGTGATCAACCAATAAATTGTAGATATATCTGCAATATATGGGAGATTGGAATCGAAATCGATACTAATGTGAAGAGAGAGGAGGTAGAGAAGCTGATCAATGAATTGATGGTAGGAGATAAAGGAAAGAAGATGAGGCAAAATGCCGTAGAGTTAAGGAAGAAAGCGGAAGAGAACACCAGTATCGGTGGTTGTTCATACATGAACTTGGACAAGGTTATTAAGGAGGTCTTGCTTAAAAAATATTAG

Protein sequence

>Msa1049050

MSYIVNKKPHAVLIPYPLQGHINPLLKLAKLLHLKGFHITFVNTEYNHNRLLKSRGSNSLDGFTDFVFETIQDGLTPMEGNGDVSQDLTSLSQSVSKNFIKPFGELLARLHDSANAGLTPPVTCFVSDCYMPFTIQVAEENALPILLFSPTSACNFLTTFHFRTMFDKGLIPLKGLQNFRLKDLPDVIRVADRKDPILEFVIEVGDSFHKASAIIFNTYDELESDVMNALYYVFPSLYTIGPLPSLLNQNPHSNLASLGSNLWKEDTKCLEWLESKEPESVVYVSFGSITVMTPEQLLEFAWGLANSKKPFLWIIRPDLVIGGSFIMSSEFEKEISDRGLIASWCPQEQVLNHPSIGGFLTHCGWNSTVESVLAGVPMLCWPFFGDQPINCRYICNIWEIGIEIDTNVKREEVEKLINELMVGDKGKKMRQNAVELRKKAEENTSIGGCSYMNLDKVIKEVLLKKY*