Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0649110 | Msa1055880 | 0.800624 | 1.320592e-48 | -8.615850e-47 |
| Msa0999120 | Msa1055880 | 0.806316 | 8.726175e-50 | -8.615850e-47 |
| Msa0537720 | Msa1055880 | 0.827789 | 1.288298e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTCTGCTGCTCGCTTATT+TGG | 0.132926 | 7_2:+31978088 | Msa1055880:intron |
| TGTTAATGAGAGGGAAATTT+TGG | 0.145504 | 7_2:-31976003 | None:intergenic |
| AAGACAGCTTGCTAATTATT+AGG | 0.228825 | 7_2:+31981571 | Msa1055880:three_prime_UTR |
| TGAGAGGGTTTGTGAGATTA+GGG | 0.236943 | 7_2:-31976038 | None:intergenic |
| GTTTGTGAGATTAGGGATTT+GGG | 0.250643 | 7_2:-31976031 | None:intergenic |
| TCTCATCACGCGCAAGGTTT+AGG | 0.252381 | 7_2:+31976174 | Msa1055880:CDS |
| CTCATCACGCGCAAGGTTTA+GGG | 0.272414 | 7_2:+31976175 | Msa1055880:CDS |
| GGTTTGTGAGATTAGGGATT+TGG | 0.289111 | 7_2:-31976032 | None:intergenic |
| ACTCAAGACATGGGCCATTT+AGG | 0.291313 | 7_2:-31981749 | None:intergenic |
| ATCTAGATCTAAACGAGTTC+GGG | 0.299380 | 7_2:+31976111 | Msa1055880:CDS |
| CTTATATTAAAATGCCTAAA+TGG | 0.300890 | 7_2:+31981735 | Msa1055880:three_prime_UTR |
| AAGGATCTGATTTCTGTGTC+TGG | 0.304999 | 7_2:+31978127 | Msa1055880:CDS |
| CTCCTTCTCCTTTGTTATGC+AGG | 0.317732 | 7_2:+31975885 | Msa1055880:five_prime_UTR |
| GTTCCGAGACAATTAGTTTA+CGG | 0.325756 | 7_2:+31980113 | Msa1055880:CDS |
| CTTGACTATGGCGGAACTTT+CGG | 0.334783 | 7_2:+31976208 | Msa1055880:CDS |
| TTAGCAAGCTGTCTTAGTTT+AGG | 0.342715 | 7_2:-31981563 | None:intergenic |
| GCAGCCTTTGCATCAATATA+TGG | 0.353073 | 7_2:-31981596 | None:intergenic |
| TGCTGGCATACTTTACATTC+AGG | 0.353674 | 7_2:-31981667 | None:intergenic |
| TTGAGAGGGTTTGTGAGATT+AGG | 0.356956 | 7_2:-31976039 | None:intergenic |
| AATCAGATCCTTGGAAGAAA+TGG | 0.365273 | 7_2:-31978116 | None:intergenic |
| ATGAAAATCTGCACGATTCA+AGG | 0.370594 | 7_2:+31976065 | Msa1055880:CDS |
| ACAAAATAACTTTCAGCAGC+TGG | 0.399341 | 7_2:-31981496 | None:intergenic |
| CATGAAGGTTATTTCTCAGT+TGG | 0.422332 | 7_2:+31981420 | Msa1055880:CDS |
| GGTTTGCAAGAACTTGACTA+TGG | 0.424853 | 7_2:+31976196 | Msa1055880:CDS |
| ATGAAGGTTATTTCTCAGTT+GGG | 0.425948 | 7_2:+31981421 | Msa1055880:CDS |
| TCGTTTAGATCTAGATCGTT+TGG | 0.430067 | 7_2:-31976104 | None:intergenic |
| CTGATTTCTGTGTCTGGGGT+AGG | 0.435333 | 7_2:+31978133 | Msa1055880:CDS |
| AGGATCTGATTTCTGTGTCT+GGG | 0.443180 | 7_2:+31978128 | Msa1055880:CDS |
| ACTAATTGTCTCGGAACATT+CGG | 0.444536 | 7_2:-31980107 | None:intergenic |
| TCGGGGCTTCAAACTATTCA+AGG | 0.448216 | 7_2:+31976129 | Msa1055880:CDS |
| GATCTAGATCTAAACGAGTT+CGG | 0.464356 | 7_2:+31976110 | Msa1055880:CDS |
| TGCAAGCTGTGTTTGGTTGG+AGG | 0.486410 | 7_2:+31979617 | Msa1055880:CDS |
| TGGACCTTCCATTTCTTCCA+AGG | 0.492174 | 7_2:+31978108 | Msa1055880:CDS |
| CAAAATAACTTTCAGCAGCT+GGG | 0.494324 | 7_2:-31981495 | None:intergenic |
| AAGCTGTGTTTGGTTGGAGG+AGG | 0.497000 | 7_2:+31979620 | Msa1055880:CDS |
| AAGTTGTTGCAAGCTGTGTT+TGG | 0.499998 | 7_2:+31979610 | Msa1055880:CDS |
| AGACACAGAAATCAGATCCT+TGG | 0.500862 | 7_2:-31978125 | None:intergenic |
| GAAAACTTGATTTAGCATGC+AGG | 0.507249 | 7_2:-31981801 | None:intergenic |
| TGTTGCAAGCTGTGTTTGGT+TGG | 0.509044 | 7_2:+31979614 | Msa1055880:CDS |
| AAAACTTGATTTAGCATGCA+GGG | 0.521098 | 7_2:-31981800 | None:intergenic |
| GATCGAAGAGTAACTAGAGC+AGG | 0.521773 | 7_2:-31981635 | None:intergenic |
| TTGCAATCTCATCACGCGCA+AGG | 0.543641 | 7_2:+31976168 | Msa1055880:CDS |
| GTATTTAGACTTCTATTCAA+AGG | 0.545451 | 7_2:+31979660 | Msa1055880:CDS |
| TTCAAACTATTCAAGGTCAA+AGG | 0.548993 | 7_2:+31976136 | Msa1055880:CDS |
| GGTTCCATATATTGATGCAA+AGG | 0.557933 | 7_2:+31981592 | Msa1055880:three_prime_UTR |
| CGCCTGCATAACAAAGGAGA+AGG | 0.558103 | 7_2:-31975887 | None:intergenic |
| AACAGTTTCAACTCAAGACA+TGG | 0.565746 | 7_2:-31981759 | None:intergenic |
| TTTCTCAGTTGGGATCATGA+AGG | 0.578930 | 7_2:+31981431 | Msa1055880:CDS |
| TAGAAGTCTAAATACTCCAC+GGG | 0.580864 | 7_2:-31979652 | None:intergenic |
| CTGCATAACAAAGGAGAAGG+AGG | 0.581030 | 7_2:-31975884 | None:intergenic |
| GTACCGTAAACTAATTGTCT+CGG | 0.581588 | 7_2:-31980116 | None:intergenic |
| AATGGATGACAAGAGAACTA+AGG | 0.587663 | 7_2:+31980031 | Msa1055880:CDS |
| CATTCGGTAAACTATAGATA+CGG | 0.601104 | 7_2:-31980091 | None:intergenic |
| TTTGTGAGATTAGGGATTTG+GGG | 0.605694 | 7_2:-31976030 | None:intergenic |
| AGCTGTGTTTGGTTGGAGGA+GGG | 0.607090 | 7_2:+31979621 | Msa1055880:CDS |
| ATAGAAGTCTAAATACTCCA+CGG | 0.612960 | 7_2:-31979653 | None:intergenic |
| GGATCTGATTTCTGTGTCTG+GGG | 0.616871 | 7_2:+31978129 | Msa1055880:CDS |
| TTGTGAGATTAGGGATTTGG+GGG | 0.618293 | 7_2:-31976029 | None:intergenic |
| GGTTGTCAGACTAGTTCCTG+TGG | 0.620175 | 7_2:+31978154 | Msa1055880:CDS |
| TCGCAATTTAATATCTGCGA+CGG | 0.623741 | 7_2:+31975775 | Msa1055880:five_prime_UTR |
| AGATCCTTGGAAGAAATGGA+AGG | 0.639486 | 7_2:-31978112 | None:intergenic |
| GAGGAGGGAGAACTTTCCCG+TGG | 0.641624 | 7_2:+31979636 | Msa1055880:CDS |
| GAGAACTAAGGTTGTAACAG+AGG | 0.645088 | 7_2:+31980043 | Msa1055880:CDS |
| TGCATAACAAAGGAGAAGGA+GGG | 0.646874 | 7_2:-31975883 | None:intergenic |
| TTGCAAGAACTTGACTATGG+CGG | 0.656350 | 7_2:+31976199 | Msa1055880:CDS |
| GGTTGCAAGACATCTCATGA+AGG | 0.658409 | 7_2:+31981405 | Msa1055880:intron |
| GATGCGGCTGTTGTAAACAA+AGG | 0.660573 | 7_2:-31975807 | None:intergenic |
| TGTGCGCGCCTGCATAACAA+AGG | 0.663503 | 7_2:-31975893 | None:intergenic |
| ACAGTTTCAACTCAAGACAT+GGG | 0.677068 | 7_2:-31981758 | None:intergenic |
| TCTAGATCTAAACGAGTTCG+GGG | 0.709841 | 7_2:+31976112 | Msa1055880:CDS |
| AATAACTTTCAGCAGCTGGG+CGG | 0.718287 | 7_2:-31981492 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTGAGATTT+GGG | - | chr7_2:31975957-31975976 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTGAGATT+TGG | - | chr7_2:31975958-31975977 | None:intergenic | 10.0% |
| !! | TAAGTAATAATTTAAGAAAA+TGG | + | chr7_2:31976741-31976760 | Msa1055880:intron | 10.0% |
| !!! | CTTTTATTATTCTTATTAAA+TGG | + | chr7_2:31977284-31977303 | Msa1055880:intron | 10.0% |
| !!! | TTTTATTGAATATGTTTTTA+AGG | + | chr7_2:31979731-31979750 | Msa1055880:intron | 10.0% |
| !!! | TTTTTTTTTTTTGAGATTTG+GGG | - | chr7_2:31975956-31975975 | None:intergenic | 15.0% |
| !!! | TCTTTTATAATATTTTCGAA+AGG | - | chr7_2:31977769-31977788 | None:intergenic | 15.0% |
| !! | AAAAATTAGTTATTCATGTA+AGG | - | chr7_2:31977827-31977846 | None:intergenic | 15.0% |
| !!! | TTACATGAATAACTAATTTT+TGG | + | chr7_2:31977826-31977845 | Msa1055880:intron | 15.0% |
| !!! | TACATGAATAACTAATTTTT+GGG | + | chr7_2:31977827-31977846 | Msa1055880:intron | 15.0% |
| !! | TTTACTTATTAATATCATTG+TGG | - | chr7_2:31979207-31979226 | None:intergenic | 15.0% |
| !! | TAAAAGTAATAAATACTACA+CGG | - | chr7_2:31979706-31979725 | None:intergenic | 15.0% |
| !! | ATCCAATATAAAAAAAACAA+AGG | - | chr7_2:31981070-31981089 | None:intergenic | 15.0% |
| !!! | TTAAAAATACATTTGATTTC+CGG | - | chr7_2:31981337-31981356 | None:intergenic | 15.0% |
| !! | TCATAAGTAAAAAAATGATG+CGG | - | chr7_2:31975826-31975845 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGAGATTTGG+GGG | - | chr7_2:31975955-31975974 | None:intergenic | 20.0% |
| !!! | TATTTCAATGTGATTTTGTA+TGG | + | chr7_2:31976467-31976486 | Msa1055880:intron | 20.0% |
| !! | ATCATTTCAATTTCAACTTA+TGG | - | chr7_2:31976642-31976661 | None:intergenic | 20.0% |
| !!! | TGCTAGTTATAAGATTTTTT+CGG | + | chr7_2:31977135-31977154 | Msa1055880:intron | 20.0% |
| !!! | CATAAGAAAAGATTTTCATA+AGG | - | chr7_2:31977383-31977402 | None:intergenic | 20.0% |
| !!! | AGTTTTATACAGTATTTGTA+GGG | - | chr7_2:31977516-31977535 | None:intergenic | 20.0% |
| !!! | AAGTTTTATACAGTATTTGT+AGG | - | chr7_2:31977517-31977536 | None:intergenic | 20.0% |
| !!! | TTATAATATTTTCGAAAGGA+AGG | - | chr7_2:31977765-31977784 | None:intergenic | 20.0% |
| !!! | TTATTTATCCTTTTCTTCTT+TGG | - | chr7_2:31978906-31978925 | None:intergenic | 20.0% |
| !! | AAAGAAGAAAAGGATAAATA+AGG | + | chr7_2:31978905-31978924 | Msa1055880:intron | 20.0% |
| !! | CAAAAATCATCCAATAAAAA+CGG | - | chr7_2:31979013-31979032 | None:intergenic | 20.0% |
| !! | TACACTTGAGAATATAAATT+TGG | - | chr7_2:31979068-31979087 | None:intergenic | 20.0% |
| !!! | ATGATTTTAGGAAAGATTAA+GGG | - | chr7_2:31979143-31979162 | None:intergenic | 20.0% |
| !!! | TTTCTGTTATAATGGAAAAT+AGG | + | chr7_2:31979292-31979311 | Msa1055880:intron | 20.0% |
| !! | AAAAGTAATAAATACTACAC+GGG | - | chr7_2:31979705-31979724 | None:intergenic | 20.0% |
| !!! | TTAATACTTATAACTTGCAA+TGG | + | chr7_2:31979822-31979841 | Msa1055880:intron | 20.0% |
| !!! | TTAAATTCCCTTTATTTTTG+AGG | + | chr7_2:31980530-31980549 | Msa1055880:intron | 20.0% |
| !!! | ATACACTTGAACATTTTAAA+GGG | - | chr7_2:31980766-31980785 | None:intergenic | 20.0% |
| !!! | AATACACTTGAACATTTTAA+AGG | - | chr7_2:31980767-31980786 | None:intergenic | 20.0% |
| !!! | TTTTAACAAGTTTATCCTTT+AGG | - | chr7_2:31980884-31980903 | None:intergenic | 20.0% |
| !! | TAAATTACGGAAATTAAGAA+AGG | - | chr7_2:31980943-31980962 | None:intergenic | 20.0% |
| !!! | GACCTTTGTTTTTTTTATAT+TGG | + | chr7_2:31981065-31981084 | Msa1055880:intron | 20.0% |
| !! | GCTGTTTATAGTATTTATAA+TGG | + | chr7_2:31981137-31981156 | Msa1055880:intron | 20.0% |
| !!! | TTTACTTATTTCTATCCTTT+TGG | - | chr7_2:31981172-31981191 | None:intergenic | 20.0% |
| !!! | AATGTATTTTTAATTGAGAG+TGG | + | chr7_2:31981344-31981363 | Msa1055880:intron | 20.0% |
| !!! | TATAATTTTAGTATCTATGC+TGG | - | chr7_2:31981687-31981706 | None:intergenic | 20.0% |
| !! | CTTATATTAAAATGCCTAAA+TGG | + | chr7_2:31981735-31981754 | Msa1055880:three_prime_UTR | 20.0% |
| ! | AGAGTTCATACATACATATT+GGG | + | chr7_2:31976907-31976926 | Msa1055880:intron | 25.0% |
| ! | CATATCTAGTGTGAATATTA+TGG | + | chr7_2:31977094-31977113 | Msa1055880:intron | 25.0% |
| ! | TATGTCTTCTTATAATGAAG+TGG | + | chr7_2:31977255-31977274 | Msa1055880:intron | 25.0% |
| !!! | ATTAATTTGTATCTGAAGCA+TGG | + | chr7_2:31977577-31977596 | Msa1055880:intron | 25.0% |
| !!! | TTAATTTGTATCTGAAGCAT+GGG | + | chr7_2:31977578-31977597 | Msa1055880:intron | 25.0% |
| ! | GAAGTCAATAACATTAACAT+TGG | - | chr7_2:31977656-31977675 | None:intergenic | 25.0% |
| ! | AATTACATTAACATTGACAC+GGG | - | chr7_2:31977679-31977698 | None:intergenic | 25.0% |
| ! | GAATTACATTAACATTGACA+CGG | - | chr7_2:31977680-31977699 | None:intergenic | 25.0% |
| ! | AAAATCTACATGGAATCAAT+TGG | - | chr7_2:31977797-31977816 | None:intergenic | 25.0% |
| ! | GAAATTAATCAGTACAAACT+TGG | - | chr7_2:31977975-31977994 | None:intergenic | 25.0% |
| ! | AGACTGAAAATGTTAATACT+GGG | - | chr7_2:31978074-31978093 | None:intergenic | 25.0% |
| ! | AAGTGATTATTAGTTAATGC+AGG | - | chr7_2:31978373-31978392 | None:intergenic | 25.0% |
| ! | TTGTAAACTTTGTCATATGA+AGG | + | chr7_2:31978517-31978536 | Msa1055880:intron | 25.0% |
| !!! | GTTTTTTTACTTCTGTAGAT+AGG | + | chr7_2:31978787-31978806 | Msa1055880:intron | 25.0% |
| ! | AAATTTCCTTGACTAATTTC+AGG | - | chr7_2:31978862-31978881 | None:intergenic | 25.0% |
| !! | AATTAGTCAAGGAAATTTTG+AGG | + | chr7_2:31978864-31978883 | Msa1055880:intron | 25.0% |
| ! | AAGAAAAGGATAAATAAGGA+AGG | + | chr7_2:31978909-31978928 | Msa1055880:intron | 25.0% |
| !!! | GATGATTTTAGGAAAGATTA+AGG | - | chr7_2:31979144-31979163 | None:intergenic | 25.0% |
| ! | AATCTTTCCTAAAATCATCA+TGG | + | chr7_2:31979145-31979164 | Msa1055880:intron | 25.0% |
| ! | TAAGTAAAGTTGTGAACTAT+AGG | + | chr7_2:31979219-31979238 | Msa1055880:intron | 25.0% |
| ! | AAGTAAAGTTGTGAACTATA+GGG | + | chr7_2:31979220-31979239 | Msa1055880:intron | 25.0% |
| ! | TTATAACAGAAACAACTCAA+TGG | - | chr7_2:31979284-31979303 | None:intergenic | 25.0% |
| !!! | TTGAGTTGTTTCTGTTATAA+TGG | + | chr7_2:31979284-31979303 | Msa1055880:intron | 25.0% |
| ! | GTATTTAGACTTCTATTCAA+AGG | + | chr7_2:31979660-31979679 | Msa1055880:CDS | 25.0% |
| !!! | TATGTTTTTAAGGATAGTTC+AGG | + | chr7_2:31979741-31979760 | Msa1055880:intron | 25.0% |
| !! | TGTCTTCTTATAATTTGCAA+TGG | + | chr7_2:31979899-31979918 | Msa1055880:intron | 25.0% |
| ! | TGAGTTTCTATATGTTAAGT+TGG | + | chr7_2:31979933-31979952 | Msa1055880:intron | 25.0% |
| !! | TAATAATGTGTATCGACAAA+GGG | - | chr7_2:31980293-31980312 | None:intergenic | 25.0% |
| ! | GAATGTGAAATGCAATAAAA+AGG | + | chr7_2:31980377-31980396 | Msa1055880:intron | 25.0% |
| ! | AGGTGATTAAGCATATAAAA+TGG | + | chr7_2:31980397-31980416 | Msa1055880:intron | 25.0% |
| ! | CATGTATTAGGACATTTAAA+TGG | - | chr7_2:31980464-31980483 | None:intergenic | 25.0% |
| ! | CATTTAAATGTCCTAATACA+TGG | + | chr7_2:31980462-31980481 | Msa1055880:intron | 25.0% |
| ! | ATTCCATCCTCAAAAATAAA+GGG | - | chr7_2:31980540-31980559 | None:intergenic | 25.0% |
| ! | AATTCCATCCTCAAAAATAA+AGG | - | chr7_2:31980541-31980560 | None:intergenic | 25.0% |
| ! | AAAAGATGTAACACAATCAA+GGG | - | chr7_2:31980811-31980830 | None:intergenic | 25.0% |
| ! | TTGCATACGGATATTTATTA+CGG | - | chr7_2:31980842-31980861 | None:intergenic | 25.0% |
| ! | AATCAGTTAATGTTTGCATA+CGG | - | chr7_2:31980855-31980874 | None:intergenic | 25.0% |
| ! | TAATTTCCGTAATTTACTCA+AGG | + | chr7_2:31980947-31980966 | Msa1055880:intron | 25.0% |
| ! | AATTTCCGTAATTTACTCAA+GGG | + | chr7_2:31980948-31980967 | Msa1055880:intron | 25.0% |
| !! | AAATCAGCACGTAATTTTAT+CGG | - | chr7_2:31981094-31981113 | None:intergenic | 25.0% |
| ! | GAGATTTATTGTATAACTTC+CGG | + | chr7_2:31981315-31981334 | Msa1055880:intron | 25.0% |
| !!! | GTTTTAACTACGATATATGG+GGG | - | chr7_2:31975982-31976001 | None:intergenic | 30.0% |
| !!! | GGTTTTAACTACGATATATG+GGG | - | chr7_2:31975983-31976002 | None:intergenic | 30.0% |
| !!! | GGGTTTTAACTACGATATAT+GGG | - | chr7_2:31975984-31976003 | None:intergenic | 30.0% |
| ! | TTAATGAGAGGGAAATTTTG+GGG | - | chr7_2:31976004-31976023 | None:intergenic | 30.0% |
| ! | GTTAATGAGAGGGAAATTTT+GGG | - | chr7_2:31976005-31976024 | None:intergenic | 30.0% |
| ! | TGTTAATGAGAGGGAAATTT+TGG | - | chr7_2:31976006-31976025 | None:intergenic | 30.0% |
| TTCAAACTATTCAAGGTCAA+AGG | + | chr7_2:31976136-31976155 | Msa1055880:CDS | 30.0% | |
| AAATTATCGAGAAGATTTGG+TGG | - | chr7_2:31976318-31976337 | None:intergenic | 30.0% | |
| CAGAAATTATCGAGAAGATT+TGG | - | chr7_2:31976321-31976340 | None:intergenic | 30.0% | |
| AATTTCCATATAACCACACA+AGG | - | chr7_2:31976603-31976622 | None:intergenic | 30.0% | |
| ! | GTCAGTTTTCAATTGAAAGA+TGG | + | chr7_2:31976876-31976895 | Msa1055880:intron | 30.0% |
| TCAATTGAAAGATGGTGAAT+CGG | + | chr7_2:31976884-31976903 | Msa1055880:intron | 30.0% | |
| GAGAGTTCATACATACATAT+TGG | + | chr7_2:31976906-31976925 | Msa1055880:intron | 30.0% | |
| ATACATATTGGGCTAATAAG+AGG | + | chr7_2:31976918-31976937 | Msa1055880:intron | 30.0% | |
| TACATATTGGGCTAATAAGA+GGG | + | chr7_2:31976919-31976938 | Msa1055880:intron | 30.0% | |
| CACTAGATATGTGCTTAAAT+TGG | - | chr7_2:31977085-31977104 | None:intergenic | 30.0% | |
| ! | GTGTGAATATTATGGACTAA+AGG | + | chr7_2:31977102-31977121 | Msa1055880:intron | 30.0% |
| !!! | AGATTTTTTCGGTATGAGTA+AGG | + | chr7_2:31977146-31977165 | Msa1055880:intron | 30.0% |
| !!! | ACATGGTTCTAATGTTCTTT+TGG | - | chr7_2:31977344-31977363 | None:intergenic | 30.0% |
| ATGTACCACTTTCTTTGAAT+AGG | + | chr7_2:31977426-31977445 | Msa1055880:intron | 30.0% | |
| CAAAACCTATTCAAAGAAAG+TGG | - | chr7_2:31977434-31977453 | None:intergenic | 30.0% | |
| ! | GAGTAAAAACAGAGATCTTT+TGG | - | chr7_2:31977468-31977487 | None:intergenic | 30.0% |
| GACTAAGTTTCTACATAAAC+CGG | - | chr7_2:31977556-31977575 | None:intergenic | 30.0% | |
| ATTACATTAACATTGACACG+GGG | - | chr7_2:31977678-31977697 | None:intergenic | 30.0% | |
| TGGTAGAATAGATCTGTAAT+AGG | + | chr7_2:31977718-31977737 | Msa1055880:intron | 30.0% | |
| GGTAGAATAGATCTGTAATA+GGG | + | chr7_2:31977719-31977738 | Msa1055880:intron | 30.0% | |
| GTAGAATAGATCTGTAATAG+GGG | + | chr7_2:31977720-31977739 | Msa1055880:intron | 30.0% | |
| !! | AACTAATTTTTGGGCATAAG+TGG | + | chr7_2:31977836-31977855 | Msa1055880:intron | 30.0% |
| GCAGTCTTAGAGTTAATAAA+GGG | + | chr7_2:31977915-31977934 | Msa1055880:intron | 30.0% | |
| CAGACTGAAAATGTTAATAC+TGG | - | chr7_2:31978075-31978094 | None:intergenic | 30.0% | |
| ! | TCAGGAGCTATTAATTTGAA+GGG | - | chr7_2:31978403-31978422 | None:intergenic | 30.0% |
| !! | CACAATTAGATCTAGCTTTA+AGG | - | chr7_2:31978742-31978761 | None:intergenic | 30.0% |
| ! | TTTTTACTTCTGTAGATAGG+TGG | + | chr7_2:31978790-31978809 | Msa1055880:intron | 30.0% |
| GTTAAGAACCAAAGAAGAAA+AGG | + | chr7_2:31978895-31978914 | Msa1055880:intron | 30.0% | |
| AAAAGGATAAATAAGGAAGG+TGG | + | chr7_2:31978912-31978931 | Msa1055880:intron | 30.0% | |
| ACAAAATGAGAAAGGAAACA+GGG | - | chr7_2:31979043-31979062 | None:intergenic | 30.0% | |
| AACAAAATGAGAAAGGAAAC+AGG | - | chr7_2:31979044-31979063 | None:intergenic | 30.0% | |
| ATTTGGCAACAAAATGAGAA+AGG | - | chr7_2:31979051-31979070 | None:intergenic | 30.0% | |
| ! | TCTACTTCCATGATGATTTT+AGG | - | chr7_2:31979155-31979174 | None:intergenic | 30.0% |
| TGTTTGATGAGAAGTCTATA+TGG | + | chr7_2:31979413-31979432 | Msa1055880:intron | 30.0% | |
| GAAATATATCCTTATCGAGT+AGG | - | chr7_2:31979462-31979481 | None:intergenic | 30.0% | |
| ATAGAAGTCTAAATACTCCA+CGG | - | chr7_2:31979656-31979675 | None:intergenic | 30.0% | |
| CATTCGGTAAACTATAGATA+CGG | - | chr7_2:31980094-31980113 | None:intergenic | 30.0% | |
| ! | ACAATTAGTTTACGGTACTA+TGG | + | chr7_2:31980121-31980140 | Msa1055880:intron | 30.0% |
| ! | CTAATAATGTGTATCGACAA+AGG | - | chr7_2:31980294-31980313 | None:intergenic | 30.0% |
| TTTATCAAAACAGATGCTTC+TGG | + | chr7_2:31980334-31980353 | Msa1055880:intron | 30.0% | |
| TTATCAAAACAGATGCTTCT+GGG | + | chr7_2:31980335-31980354 | Msa1055880:intron | 30.0% | |
| ATGATAACATTAGAGACACT+CGG | - | chr7_2:31980424-31980443 | None:intergenic | 30.0% | |
| !!! | ATTCCCTTTATTTTTGAGGA+TGG | + | chr7_2:31980534-31980553 | Msa1055880:intron | 30.0% |
| !! | TATTTTTGAGGATGGAATTG+AGG | + | chr7_2:31980542-31980561 | Msa1055880:intron | 30.0% |
| AACATAGACTGCAAATAACT+CGG | - | chr7_2:31980619-31980638 | None:intergenic | 30.0% | |
| AGTGTCATATATTTAGAGAC+AGG | - | chr7_2:31980710-31980729 | None:intergenic | 30.0% | |
| ! | TAACACAATCAAGGGTATAT+TGG | - | chr7_2:31980803-31980822 | None:intergenic | 30.0% |
| CAAAAGATGTAACACAATCA+AGG | - | chr7_2:31980812-31980831 | None:intergenic | 30.0% | |
| ATTACGGAAATTAAGAAAGG+TGG | - | chr7_2:31980940-31980959 | None:intergenic | 30.0% | |
| ATTTCCGTAATTTACTCAAG+GGG | + | chr7_2:31980949-31980968 | Msa1055880:intron | 30.0% | |
| TCAAGGGGATCTTATAATTA+GGG | + | chr7_2:31980964-31980983 | Msa1055880:intron | 30.0% | |
| TAATGGAAAGAAGTTCCAAA+AGG | + | chr7_2:31981154-31981173 | Msa1055880:intron | 30.0% | |
| ACTTCCAGAAAATTTCTTGT+AGG | + | chr7_2:31981384-31981403 | Msa1055880:intron | 30.0% | |
| !! | ATGAAGGTTATTTCTCAGTT+GGG | + | chr7_2:31981421-31981440 | Msa1055880:CDS | 30.0% |
| !! | AAGACAGCTTGCTAATTATT+AGG | + | chr7_2:31981571-31981590 | Msa1055880:three_prime_UTR | 30.0% |
| AAAACTTGATTTAGCATGCA+GGG | - | chr7_2:31981803-31981822 | None:intergenic | 30.0% | |
| TCGCAATTTAATATCTGCGA+CGG | + | chr7_2:31975775-31975794 | Msa1055880:five_prime_UTR | 35.0% | |
| !!! | GGGGTTTTAACTACGATATA+TGG | - | chr7_2:31975985-31976004 | None:intergenic | 35.0% |
| TTTGTGAGATTAGGGATTTG+GGG | - | chr7_2:31976033-31976052 | None:intergenic | 35.0% | |
| GTTTGTGAGATTAGGGATTT+GGG | - | chr7_2:31976034-31976053 | None:intergenic | 35.0% | |
| !! | CAGATTTTCATGGATTGAGA+GGG | - | chr7_2:31976056-31976075 | None:intergenic | 35.0% |
| ! | TTGAATCGTGCAGATTTTCA+TGG | - | chr7_2:31976066-31976085 | None:intergenic | 35.0% |
| ATGAAAATCTGCACGATTCA+AGG | + | chr7_2:31976065-31976084 | Msa1055880:CDS | 35.0% | |
| TCGTTTAGATCTAGATCGTT+TGG | - | chr7_2:31976107-31976126 | None:intergenic | 35.0% | |
| GATCTAGATCTAAACGAGTT+CGG | + | chr7_2:31976110-31976129 | Msa1055880:CDS | 35.0% | |
| ATCTAGATCTAAACGAGTTC+GGG | + | chr7_2:31976111-31976130 | Msa1055880:CDS | 35.0% | |
| ! | ATTTTTGCTTGTTCCTTGTG+TGG | + | chr7_2:31976587-31976606 | Msa1055880:intron | 35.0% |
| TTGTTCCTTGTGTGGTTATA+TGG | + | chr7_2:31976595-31976614 | Msa1055880:intron | 35.0% | |
| ! | GATCTGTGGATGAATGTTTT+TGG | + | chr7_2:31976673-31976692 | Msa1055880:intron | 35.0% |
| ACATATTGGGCTAATAAGAG+GGG | + | chr7_2:31976920-31976939 | Msa1055880:intron | 35.0% | |
| ! | TATGGACTAAAGGAAGTACA+TGG | + | chr7_2:31977112-31977131 | Msa1055880:intron | 35.0% |
| GTTTACGATCATGAAGTAGA+TGG | + | chr7_2:31977222-31977241 | Msa1055880:intron | 35.0% | |
| ! | GAAAAAAGAGCACATTGACA+TGG | - | chr7_2:31977361-31977380 | None:intergenic | 35.0% |
| TGTAGGGAAACTAACTAGAA+AGG | - | chr7_2:31977500-31977519 | None:intergenic | 35.0% | |
| CTTGCAATCATTTGAACTTC+CGG | + | chr7_2:31977534-31977553 | Msa1055880:intron | 35.0% | |
| TCCAAAAATGCATTGTCACT+TGG | + | chr7_2:31977698-31977717 | Msa1055880:intron | 35.0% | |
| ! | ACCAAGTGACAATGCATTTT+TGG | - | chr7_2:31977702-31977721 | None:intergenic | 35.0% |
| AGGTGAAAGCAAAATCTACA+TGG | - | chr7_2:31977807-31977826 | None:intergenic | 35.0% | |
| TGAAACAAATACTGCCACTA+CGG | + | chr7_2:31977880-31977899 | Msa1055880:intron | 35.0% | |
| GGCAGTCTTAGAGTTAATAA+AGG | + | chr7_2:31977914-31977933 | Msa1055880:intron | 35.0% | |
| ! | AATCAGTACAAACTTGGTGA+AGG | - | chr7_2:31977969-31977988 | None:intergenic | 35.0% |
| AATCAGATCCTTGGAAGAAA+TGG | - | chr7_2:31978119-31978138 | None:intergenic | 35.0% | |
| ATAAAAACAGAACAAGCCAC+AGG | - | chr7_2:31978173-31978192 | None:intergenic | 35.0% | |
| ! | GTCAGGAGCTATTAATTTGA+AGG | - | chr7_2:31978404-31978423 | None:intergenic | 35.0% |
| TGTTATCACGCTAGACATTT+AGG | + | chr7_2:31978657-31978676 | Msa1055880:intron | 35.0% | |
| GTTATCACGCTAGACATTTA+GGG | + | chr7_2:31978658-31978677 | Msa1055880:intron | 35.0% | |
| TTATCACGCTAGACATTTAG+GGG | + | chr7_2:31978659-31978678 | Msa1055880:intron | 35.0% | |
| ! | TTGACTAATTTCAGGTCTGT+TGG | - | chr7_2:31978854-31978873 | None:intergenic | 35.0% |
| AACAGACCTGAAATTAGTCA+AGG | + | chr7_2:31978853-31978872 | Msa1055880:intron | 35.0% | |
| GTTAGTACTGTTCCACTATA+AGG | + | chr7_2:31978976-31978995 | Msa1055880:intron | 35.0% | |
| TACTGTTCCACTATAAGGTA+AGG | + | chr7_2:31978981-31979000 | Msa1055880:intron | 35.0% | |
| ACTGTTCCACTATAAGGTAA+GGG | + | chr7_2:31978982-31979001 | Msa1055880:intron | 35.0% | |
| !! | AAGGGCTTTACCGTTTTTAT+TGG | + | chr7_2:31979000-31979019 | Msa1055880:intron | 35.0% |
| CAAAAGTCAAATGCACAAGT+CGG | - | chr7_2:31979097-31979116 | None:intergenic | 35.0% | |
| ATTGCAAGAAGTCATTTGCA+CGG | + | chr7_2:31979491-31979510 | Msa1055880:intron | 35.0% | |
| ATTTGCACGGTTCAATATCA+AGG | + | chr7_2:31979504-31979523 | Msa1055880:intron | 35.0% | |
| TAGAAGTCTAAATACTCCAC+GGG | - | chr7_2:31979655-31979674 | None:intergenic | 35.0% | |
| TTTAAGGATAGTTCAGGTCT+TGG | + | chr7_2:31979747-31979766 | Msa1055880:intron | 35.0% | |
| AATGGATGACAAGAGAACTA+AGG | + | chr7_2:31980031-31980050 | Msa1055880:CDS | 35.0% | |
| ACTAATTGTCTCGGAACATT+CGG | - | chr7_2:31980110-31980129 | None:intergenic | 35.0% | |
| ! | GTTCCGAGACAATTAGTTTA+CGG | + | chr7_2:31980113-31980132 | Msa1055880:CDS | 35.0% |
| GTACCGTAAACTAATTGTCT+CGG | - | chr7_2:31980119-31980138 | None:intergenic | 35.0% | |
| GTTTACGGTACTATGGTATA+TGG | + | chr7_2:31980128-31980147 | Msa1055880:intron | 35.0% | |
| TAATGGAAGTCTTGAATCAC+AGG | + | chr7_2:31980254-31980273 | Msa1055880:intron | 35.0% | |
| TACACATTATTAGTTGCTGC+TGG | + | chr7_2:31980301-31980320 | Msa1055880:intron | 35.0% | |
| TATCAAAACAGATGCTTCTG+GGG | + | chr7_2:31980336-31980355 | Msa1055880:intron | 35.0% | |
| TGAAGTGAACACCATGTATT+AGG | - | chr7_2:31980476-31980495 | None:intergenic | 35.0% | |
| ACATAGACTGCAAATAACTC+GGG | - | chr7_2:31980618-31980637 | None:intergenic | 35.0% | |
| ! | TAACTGATTCTCTCTCCTAA+AGG | + | chr7_2:31980866-31980885 | Msa1055880:intron | 35.0% |
| AGATCCCCTTGAGTAAATTA+CGG | - | chr7_2:31980956-31980975 | None:intergenic | 35.0% | |
| CTCAAGGGGATCTTATAATT+AGG | + | chr7_2:31980963-31980982 | Msa1055880:intron | 35.0% | |
| GATGCAATAAAGTACAACCT+CGG | - | chr7_2:31980991-31981010 | None:intergenic | 35.0% | |
| TGTTTGTAGTTTACGAGTTC+AGG | + | chr7_2:31981114-31981133 | Msa1055880:intron | 35.0% | |
| GTTTGTAGTTTACGAGTTCA+GGG | + | chr7_2:31981115-31981134 | Msa1055880:intron | 35.0% | |
| TATTCCCATGTAAGCTTTCT+AGG | + | chr7_2:31981254-31981273 | Msa1055880:intron | 35.0% | |
| GAAACCTAGAAAGCTTACAT+GGG | - | chr7_2:31981261-31981280 | None:intergenic | 35.0% | |
| AGAAACCTAGAAAGCTTACA+TGG | - | chr7_2:31981262-31981281 | None:intergenic | 35.0% | |
| ! | GCAACCTACAAGAAATTTTC+TGG | - | chr7_2:31981391-31981410 | None:intergenic | 35.0% |
| !! | CATGAAGGTTATTTCTCAGT+TGG | + | chr7_2:31981420-31981439 | Msa1055880:CDS | 35.0% |
| CAAAATAACTTTCAGCAGCT+GGG | - | chr7_2:31981498-31981517 | None:intergenic | 35.0% | |
| ACAAAATAACTTTCAGCAGC+TGG | - | chr7_2:31981499-31981518 | None:intergenic | 35.0% | |
| TTAGCAAGCTGTCTTAGTTT+AGG | - | chr7_2:31981566-31981585 | None:intergenic | 35.0% | |
| GGTTCCATATATTGATGCAA+AGG | + | chr7_2:31981592-31981611 | Msa1055880:three_prime_UTR | 35.0% | |
| ACAGTTTCAACTCAAGACAT+GGG | - | chr7_2:31981761-31981780 | None:intergenic | 35.0% | |
| AACAGTTTCAACTCAAGACA+TGG | - | chr7_2:31981762-31981781 | None:intergenic | 35.0% | |
| GAAAACTTGATTTAGCATGC+AGG | - | chr7_2:31981804-31981823 | None:intergenic | 35.0% | |
| TGCATAACAAAGGAGAAGGA+GGG | - | chr7_2:31975886-31975905 | None:intergenic | 40.0% | |
| !!! | TGGGGGTTTTGTTAATGAGA+GGG | - | chr7_2:31976015-31976034 | None:intergenic | 40.0% |
| !!! | TTGGGGGTTTTGTTAATGAG+AGG | - | chr7_2:31976016-31976035 | None:intergenic | 40.0% |
| TTGTGAGATTAGGGATTTGG+GGG | - | chr7_2:31976032-31976051 | None:intergenic | 40.0% | |
| GGTTTGTGAGATTAGGGATT+TGG | - | chr7_2:31976035-31976054 | None:intergenic | 40.0% | |
| TGAGAGGGTTTGTGAGATTA+GGG | - | chr7_2:31976041-31976060 | None:intergenic | 40.0% | |
| TTGAGAGGGTTTGTGAGATT+AGG | - | chr7_2:31976042-31976061 | None:intergenic | 40.0% | |
| !! | GCAGATTTTCATGGATTGAG+AGG | - | chr7_2:31976057-31976076 | None:intergenic | 40.0% |
| TCTAGATCTAAACGAGTTCG+GGG | + | chr7_2:31976112-31976131 | Msa1055880:CDS | 40.0% | |
| GGTTTGCAAGAACTTGACTA+TGG | + | chr7_2:31976196-31976215 | Msa1055880:CDS | 40.0% | |
| TTGCAAGAACTTGACTATGG+CGG | + | chr7_2:31976199-31976218 | Msa1055880:CDS | 40.0% | |
| !!! | CTGTGGATGAATGTTTTTGG+AGG | + | chr7_2:31976676-31976695 | Msa1055880:intron | 40.0% |
| ATTGATTATCGCTACAGCAC+CGG | - | chr7_2:31976845-31976864 | None:intergenic | 40.0% | |
| TGTTTCACACTCAGCTGATA+TGG | + | chr7_2:31976965-31976984 | Msa1055880:intron | 40.0% | |
| GTTTCACACTCAGCTGATAT+GGG | + | chr7_2:31976966-31976985 | Msa1055880:intron | 40.0% | |
| GATCATGAAGTAGATGGATG+AGG | + | chr7_2:31977228-31977247 | Msa1055880:intron | 40.0% | |
| ! | TATTTTCGAAAGGAAGGAGC+AGG | - | chr7_2:31977759-31977778 | None:intergenic | 40.0% |
| GCCACTACGGAATTAAATCA+AGG | + | chr7_2:31977893-31977912 | Msa1055880:intron | 40.0% | |
| GCCTTGATTTAATTCCGTAG+TGG | - | chr7_2:31977897-31977916 | None:intergenic | 40.0% | |
| AGATCCTTGGAAGAAATGGA+AGG | - | chr7_2:31978115-31978134 | None:intergenic | 40.0% | |
| AGACACAGAAATCAGATCCT+TGG | - | chr7_2:31978128-31978147 | None:intergenic | 40.0% | |
| AAGGATCTGATTTCTGTGTC+TGG | + | chr7_2:31978127-31978146 | Msa1055880:CDS | 40.0% | |
| AGGATCTGATTTCTGTGTCT+GGG | + | chr7_2:31978128-31978147 | Msa1055880:CDS | 40.0% | |
| TATCTGAGTCAGTCTCAAAG+AGG | - | chr7_2:31978459-31978478 | None:intergenic | 40.0% | |
| TTGTGCTTGAGCTAGATAGA+AGG | + | chr7_2:31978757-31978776 | Msa1055880:intron | 40.0% | |
| TGTGCTTGAGCTAGATAGAA+GGG | + | chr7_2:31978758-31978777 | Msa1055880:intron | 40.0% | |
| GTAAAGCCCTTACCTTATAG+TGG | - | chr7_2:31978991-31979010 | None:intergenic | 40.0% | |
| !! | TTCAGCTTGCTAAGGAGTAA+AGG | - | chr7_2:31979327-31979346 | None:intergenic | 40.0% |
| !! | ACGACTATTTCAGCTTGCTA+AGG | - | chr7_2:31979335-31979354 | None:intergenic | 40.0% |
| TATTGAACGCCTACTCGATA+AGG | + | chr7_2:31979450-31979469 | Msa1055880:intron | 40.0% | |
| AAGTTGTTGCAAGCTGTGTT+TGG | + | chr7_2:31979610-31979629 | Msa1055880:CDS | 40.0% | |
| ! | CTCTTTTCAGTGCTTCACAA+TGG | + | chr7_2:31980013-31980032 | Msa1055880:intron | 40.0% |
| GAGAACTAAGGTTGTAACAG+AGG | + | chr7_2:31980043-31980062 | Msa1055880:CDS | 40.0% | |
| ! | TTGTAACAGAGGCTTTTGCA+AGG | + | chr7_2:31980054-31980073 | Msa1055880:CDS | 40.0% |
| AGACAGTTTGGGGGAAATAA+TGG | + | chr7_2:31980237-31980256 | Msa1055880:intron | 40.0% | |
| CATAGACTGCAAATAACTCG+GGG | - | chr7_2:31980617-31980636 | None:intergenic | 40.0% | |
| !!! | CAACATTGTGCTGCTTTTAC+AGG | + | chr7_2:31980662-31980681 | Msa1055880:intron | 40.0% |
| GATCTTATAATTAGGGACCG+AGG | + | chr7_2:31980971-31980990 | Msa1055880:intron | 40.0% | |
| ! | GTATAGCTGCTTGCTTGTTT+TGG | + | chr7_2:31981037-31981056 | Msa1055880:intron | 40.0% |
| GAGTACAGTCACATAAGAGT+AGG | - | chr7_2:31981218-31981237 | None:intergenic | 40.0% | |
| TTTCTCAGTTGGGATCATGA+AGG | + | chr7_2:31981431-31981450 | Msa1055880:CDS | 40.0% | |
| GCAGCCTTTGCATCAATATA+TGG | - | chr7_2:31981599-31981618 | None:intergenic | 40.0% | |
| TGCTGGCATACTTTACATTC+AGG | - | chr7_2:31981670-31981689 | None:intergenic | 40.0% | |
| GATGCGGCTGTTGTAAACAA+AGG | - | chr7_2:31975810-31975829 | None:intergenic | 45.0% | |
| CTGCATAACAAAGGAGAAGG+AGG | - | chr7_2:31975887-31975906 | None:intergenic | 45.0% | |
| ! | CTCCTTCTCCTTTGTTATGC+AGG | + | chr7_2:31975885-31975904 | Msa1055880:five_prime_UTR | 45.0% |
| TCGGGGCTTCAAACTATTCA+AGG | + | chr7_2:31976129-31976148 | Msa1055880:CDS | 45.0% | |
| ! | CTTGACTATGGCGGAACTTT+CGG | + | chr7_2:31976208-31976227 | Msa1055880:CDS | 45.0% |
| GATGTACATTGAGCGATCTG+TGG | + | chr7_2:31976659-31976678 | Msa1055880:intron | 45.0% | |
| TAAGTGTCTCATGTCTGCGT+TGG | - | chr7_2:31976712-31976731 | None:intergenic | 45.0% | |
| TAGCCTTCGATCAGAAATGC+CGG | + | chr7_2:31976823-31976842 | Msa1055880:intron | 45.0% | |
| AGGGGCTGCTATGCTTAAAA+TGG | + | chr7_2:31976938-31976957 | Msa1055880:intron | 45.0% | |
| GGGGCTGCTATGCTTAAAAT+GGG | + | chr7_2:31976939-31976958 | Msa1055880:intron | 45.0% | |
| AGATGCAACGCTCAAAAGCA+TGG | - | chr7_2:31978018-31978037 | None:intergenic | 45.0% | |
| TGGACCTTCCATTTCTTCCA+AGG | + | chr7_2:31978108-31978127 | Msa1055880:CDS | 45.0% | |
| GGATCTGATTTCTGTGTCTG+GGG | + | chr7_2:31978129-31978148 | Msa1055880:CDS | 45.0% | |
| TGAGTCAGTCTCAAAGAGGT+TGG | - | chr7_2:31978455-31978474 | None:intergenic | 45.0% | |
| ! | TTTTGTCGCGAGTGAGGTAT+GGG | + | chr7_2:31978608-31978627 | Msa1055880:intron | 45.0% |
| ACGCTAGACATTTAGGGGTT+TGG | + | chr7_2:31978664-31978683 | Msa1055880:intron | 45.0% | |
| GGTTTGGCAGCTAGAATACA+AGG | + | chr7_2:31978680-31978699 | Msa1055880:intron | 45.0% | |
| ! | AGAGTAGTGGGAGTCACAAA+TGG | + | chr7_2:31979378-31979397 | Msa1055880:intron | 45.0% |
| TGTTGCAAGCTGTGTTTGGT+TGG | + | chr7_2:31979614-31979633 | Msa1055880:CDS | 45.0% | |
| ! | AGTGCTGTTCGAAGACAGTT+TGG | + | chr7_2:31980225-31980244 | Msa1055880:intron | 45.0% |
| ! | GTGCTGTTCGAAGACAGTTT+GGG | + | chr7_2:31980226-31980245 | Msa1055880:intron | 45.0% |
| TGCTGTTCGAAGACAGTTTG+GGG | + | chr7_2:31980227-31980246 | Msa1055880:intron | 45.0% | |
| CATGTCCACCACATAGATTG+CGG | - | chr7_2:31980572-31980591 | None:intergenic | 45.0% | |
| CATGGTTACCTTTGTAGCAG+TGG | + | chr7_2:31980588-31980607 | Msa1055880:intron | 45.0% | |
| TATGTTCCGACCTGCACATA+TGG | + | chr7_2:31980633-31980652 | Msa1055880:intron | 45.0% | |
| TTTCTGTGTTTCGTATGCCC+TGG | + | chr7_2:31981277-31981296 | Msa1055880:intron | 45.0% | |
| GGTTGCAAGACATCTCATGA+AGG | + | chr7_2:31981405-31981424 | Msa1055880:intron | 45.0% | |
| AATAACTTTCAGCAGCTGGG+CGG | - | chr7_2:31981495-31981514 | None:intergenic | 45.0% | |
| GATCGAAGAGTAACTAGAGC+AGG | - | chr7_2:31981638-31981657 | None:intergenic | 45.0% | |
| ACTCAAGACATGGGCCATTT+AGG | - | chr7_2:31981752-31981771 | None:intergenic | 45.0% | |
| !! | CTAATAATTAAAAAAATAAT+TGG | - | chr7_2:31978323-31978342 | None:intergenic | 5.0% |
| CGCCTGCATAACAAAGGAGA+AGG | - | chr7_2:31975890-31975909 | None:intergenic | 50.0% | |
| TTGCAATCTCATCACGCGCA+AGG | + | chr7_2:31976168-31976187 | Msa1055880:CDS | 50.0% | |
| TCTCATCACGCGCAAGGTTT+AGG | + | chr7_2:31976174-31976193 | Msa1055880:CDS | 50.0% | |
| CTCATCACGCGCAAGGTTTA+GGG | + | chr7_2:31976175-31976194 | Msa1055880:CDS | 50.0% | |
| CAGTCTGCTGCTCGCTTATT+TGG | + | chr7_2:31978088-31978107 | Msa1055880:intron | 50.0% | |
| ! | CTGATTTCTGTGTCTGGGGT+AGG | + | chr7_2:31978133-31978152 | Msa1055880:CDS | 50.0% |
| ! | GGTTGTCAGACTAGTTCCTG+TGG | + | chr7_2:31978154-31978173 | Msa1055880:CDS | 50.0% |
| TGATCTTGAGCTGGAGAGTC+AGG | - | chr7_2:31978421-31978440 | None:intergenic | 50.0% | |
| TCTCCAGCTCAAGATCACGT+TGG | + | chr7_2:31978424-31978443 | Msa1055880:intron | 50.0% | |
| TCACCAACGTGATCTTGAGC+TGG | - | chr7_2:31978430-31978449 | None:intergenic | 50.0% | |
| CTCACTCGCGACAAAACACT+TGG | - | chr7_2:31978604-31978623 | None:intergenic | 50.0% | |
| ! | CAAGTGTTTTGTCGCGAGTG+AGG | + | chr7_2:31978602-31978621 | Msa1055880:intron | 50.0% |
| ! | GTTTTGTCGCGAGTGAGGTA+TGG | + | chr7_2:31978607-31978626 | Msa1055880:intron | 50.0% |
| TTTGTCGCGAGTGAGGTATG+GGG | + | chr7_2:31978609-31978628 | Msa1055880:intron | 50.0% | |
| ! | GCAAATTGCGCTGATCGTGT+TGG | + | chr7_2:31978949-31978968 | Msa1055880:intron | 50.0% |
| CGTAGTCCTTTACTCCCACA+AGG | + | chr7_2:31979352-31979371 | Msa1055880:intron | 50.0% | |
| ! | TCTGAGCCTTGTGGGAGTAA+AGG | - | chr7_2:31979361-31979380 | None:intergenic | 50.0% |
| TGCAAGCTGTGTTTGGTTGG+AGG | + | chr7_2:31979617-31979636 | Msa1055880:CDS | 50.0% | |
| AAGCTGTGTTTGGTTGGAGG+AGG | + | chr7_2:31979620-31979639 | Msa1055880:CDS | 50.0% | |
| AGCTGTGTTTGGTTGGAGGA+GGG | + | chr7_2:31979621-31979640 | Msa1055880:CDS | 50.0% | |
| GCTGTTCGAAGACAGTTTGG+GGG | + | chr7_2:31980228-31980247 | Msa1055880:intron | 50.0% | |
| GAGGAATGCCGCAATCTATG+TGG | + | chr7_2:31980561-31980580 | Msa1055880:intron | 50.0% | |
| GAATGCCGCAATCTATGTGG+TGG | + | chr7_2:31980564-31980583 | Msa1055880:intron | 50.0% | |
| !! | CGCAATCTATGTGGTGGACA+TGG | + | chr7_2:31980570-31980589 | Msa1055880:intron | 50.0% |
| TCTCCTCCATATGTGCAGGT+CGG | - | chr7_2:31980642-31980661 | None:intergenic | 50.0% | |
| GTTGTCTCCTCCATATGTGC+AGG | - | chr7_2:31980646-31980665 | None:intergenic | 50.0% | |
| TCCCAAATCCAACTGCACCA+GGG | - | chr7_2:31981297-31981316 | None:intergenic | 50.0% | |
| TGTGCGCGCCTGCATAACAA+AGG | - | chr7_2:31975896-31975915 | None:intergenic | 55.0% | |
| ! | GCACCGGCATTTCTGATCGA+AGG | - | chr7_2:31976829-31976848 | None:intergenic | 55.0% |
| TCCCACAAGGCTCAGAGTAG+TGG | + | chr7_2:31979365-31979384 | Msa1055880:intron | 55.0% | |
| ! | CCCACTACTCTGAGCCTTGT+GGG | - | chr7_2:31979369-31979388 | None:intergenic | 55.0% |
| CCCACAAGGCTCAGAGTAGT+GGG | + | chr7_2:31979366-31979385 | Msa1055880:intron | 55.0% | |
| TCCCACTACTCTGAGCCTTG+TGG | - | chr7_2:31979370-31979389 | None:intergenic | 55.0% | |
| CGACAAAGCAGTCGACGCAT+CGG | - | chr7_2:31980178-31980197 | None:intergenic | 55.0% | |
| GTTCCGACCTGCACATATGG+AGG | + | chr7_2:31980636-31980655 | Msa1055880:intron | 55.0% | |
| TTCGTATGCCCTGGTGCAGT+TGG | + | chr7_2:31981286-31981305 | Msa1055880:intron | 55.0% | |
| TGCCCTGGTGCAGTTGGATT+TGG | + | chr7_2:31981292-31981311 | Msa1055880:intron | 55.0% | |
| GCCCTGGTGCAGTTGGATTT+GGG | + | chr7_2:31981293-31981312 | Msa1055880:intron | 55.0% | |
| CTCCCAAATCCAACTGCACC+AGG | - | chr7_2:31981298-31981317 | None:intergenic | 55.0% | |
| GAGGAGGGAGAACTTTCCCG+TGG | + | chr7_2:31979636-31979655 | Msa1055880:CDS | 60.0% | |
| CGGGGAGACCACTGCTACAA+AGG | - | chr7_2:31980599-31980618 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 31975750 | 31981823 | 31975750 | ID=Msa1055880;Name=Msa1055880 |
| chr7_2 | mRNA | 31975750 | 31981823 | 31975750 | ID=Msa1055880-mRNA-1;Parent=Msa1055880;Name=Msa1055880-mRNA-1;_AED=0.30;_eAED=0.30;_QI=315|0.5|0.6|1|0.25|0.2|5|347|169 |
| chr7_2 | exon | 31975750 | 31976229 | 31975750 | ID=Msa1055880-mRNA-1:exon:6385;Parent=Msa1055880-mRNA-1 |
| chr7_2 | exon | 31978091 | 31978179 | 31978091 | ID=Msa1055880-mRNA-1:exon:6386;Parent=Msa1055880-mRNA-1 |
| chr7_2 | exon | 31979609 | 31979681 | 31979609 | ID=Msa1055880-mRNA-1:exon:6387;Parent=Msa1055880-mRNA-1 |
| chr7_2 | exon | 31980023 | 31980134 | 31980023 | ID=Msa1055880-mRNA-1:exon:6388;Parent=Msa1055880-mRNA-1 |
| chr7_2 | exon | 31981406 | 31981823 | 31981406 | ID=Msa1055880-mRNA-1:exon:6389;Parent=Msa1055880-mRNA-1 |
| chr7_2 | five_prime_UTR | 31975750 | 31976064 | 31975750 | ID=Msa1055880-mRNA-1:five_prime_utr;Parent=Msa1055880-mRNA-1 |
| chr7_2 | CDS | 31976065 | 31976229 | 31976065 | ID=Msa1055880-mRNA-1:cds;Parent=Msa1055880-mRNA-1 |
| chr7_2 | CDS | 31978091 | 31978179 | 31978091 | ID=Msa1055880-mRNA-1:cds;Parent=Msa1055880-mRNA-1 |
| chr7_2 | CDS | 31979609 | 31979681 | 31979609 | ID=Msa1055880-mRNA-1:cds;Parent=Msa1055880-mRNA-1 |
| chr7_2 | CDS | 31980023 | 31980134 | 31980023 | ID=Msa1055880-mRNA-1:cds;Parent=Msa1055880-mRNA-1 |
| chr7_2 | CDS | 31981406 | 31981476 | 31981406 | ID=Msa1055880-mRNA-1:cds;Parent=Msa1055880-mRNA-1 |
| chr7_2 | three_prime_UTR | 31981477 | 31981823 | 31981477 | ID=Msa1055880-mRNA-1:three_prime_utr;Parent=Msa1055880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
