Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057630 | XP_013442988.1 | 95.681 | 301 | 13 | 0 | 1 | 301 | 1 | 301 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057630 | sp|Q5I0I5|USB1_RAT | 25.391 | 256 | 162 | 3 | 46 | 295 | 32 | 264 | 7.82e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057630 | A0A072TJH3 | 95.681 | 301 | 13 | 0 | 1 | 301 | 1 | 301 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0381610 | Msa1057630 | 0.808666 | 2.768921e-50 | -8.615850e-47 |
| Msa1057630 | Msa1282580 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057630 | MtrunA17_Chr7g0230691 | 95.681 | 301 | 13 | 0 | 1 | 301 | 1 | 301 | 0.0 | 538 |
| Msa1057630 | MtrunA17_Chr7g0230741 | 93.989 | 183 | 11 | 0 | 1 | 183 | 1 | 183 | 7.36e-100 | 291 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057630 | AT5G51170.1 | 63.514 | 222 | 80 | 1 | 79 | 300 | 64 | 284 | 1.85e-100 | 296 |
| Msa1057630 | AT5G51170.4 | 58.108 | 222 | 64 | 2 | 79 | 300 | 64 | 256 | 1.32e-88 | 265 |
| Msa1057630 | AT5G51170.3 | 63.590 | 195 | 70 | 1 | 106 | 300 | 28 | 221 | 4.86e-86 | 257 |
| Msa1057630 | AT5G51170.2 | 61.702 | 141 | 53 | 1 | 79 | 219 | 64 | 203 | 1.00e-57 | 186 |
Find 91 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGATCTGCCAAAATATTTA+TGG | 0.159427 | 7_2:-39736971 | Msa1057630:three_prime_UTR |
| GGATGCAACCATAAATATTT+TGG | 0.166666 | 7_2:+39736963 | None:intergenic |
| TTCAATACCTTTGAATTTAC+AGG | 0.230241 | 7_2:+39737069 | None:intergenic |
| CCCAGCATACCAAGAAAATT+TGG | 0.234445 | 7_2:+39741441 | None:intergenic |
| AAGGGAGTTTCACATAAGTT+TGG | 0.299639 | 7_2:-39739867 | Msa1057630:CDS |
| GGAGGATGAAGGAGAGCAAT+AGG | 0.324941 | 7_2:+39741462 | None:intergenic |
| AGCTCCTAACTTTAGTTGTC+TGG | 0.332076 | 7_2:+39741238 | None:intergenic |
| GAAATCAAGAAATGTGTTAC+TGG | 0.348417 | 7_2:-39737118 | Msa1057630:CDS |
| CAGTCTACATAGAATAGAAT+TGG | 0.359630 | 7_2:+39736942 | None:intergenic |
| TAGGAGGTGGCGGCAAGGGC+TGG | 0.366489 | 7_2:+39741481 | None:intergenic |
| GTCATCCACAACTTTCTTCA+AGG | 0.372151 | 7_2:+39737141 | None:intergenic |
| TCTAACGGTTCATTAGTCTT+TGG | 0.379690 | 7_2:+39742278 | None:intergenic |
| CAGGCATTAATGCAATGTTA+TGG | 0.387602 | 7_2:-39741630 | Msa1057630:CDS |
| ACACTGACCTCGTAAAATTC+AGG | 0.393841 | 7_2:+39737664 | None:intergenic |
| CTCTCAGTCGAGGTTGTTCA+CGG | 0.396930 | 7_2:-39739611 | Msa1057630:CDS |
| AAAGGTATTGAATGTAAGAT+TGG | 0.400108 | 7_2:-39737058 | Msa1057630:CDS |
| AGGGAGTTTCACATAAGTTT+GGG | 0.402709 | 7_2:-39739866 | Msa1057630:CDS |
| CATTTCGTTAGCATGGTCAT+TGG | 0.406486 | 7_2:-39737179 | Msa1057630:CDS |
| AGGAGCTTCCCTCATGTTGA+TGG | 0.416207 | 7_2:-39741222 | Msa1057630:CDS |
| TAAGCCAGACAACTAAAGTT+AGG | 0.418446 | 7_2:-39741242 | Msa1057630:CDS |
| AGGCATTAATGCAATGTTAT+GGG | 0.419915 | 7_2:-39741629 | Msa1057630:CDS |
| TTCACGAATGTTTGTTGCCC+GGG | 0.435513 | 7_2:+39741524 | None:intergenic |
| CAGACGGCGGCGGTGCGGTA+AGG | 0.440367 | 7_2:+39742126 | None:intergenic |
| TCAATCTGATGTACTCGTAT+TGG | 0.447949 | 7_2:+39739833 | None:intergenic |
| CACAACTTTCTTCAAGGAAT+CGG | 0.450195 | 7_2:+39737147 | None:intergenic |
| ATTTCGTTAGCATGGTCATT+GGG | 0.452771 | 7_2:-39737178 | Msa1057630:CDS |
| AAGCAATGGGTCGGGGACAC+TGG | 0.454578 | 7_2:+39742171 | None:intergenic |
| AAGGTTTCAAGCAATGGGTC+GGG | 0.462358 | 7_2:+39742163 | None:intergenic |
| TGTATAAGCTAAGGTTGGAT+TGG | 0.466587 | 7_2:+39741569 | None:intergenic |
| CAGTCGAGGTTGTTCACGGT+GGG | 0.470787 | 7_2:-39739607 | Msa1057630:CDS |
| TGTTGAGAAGAGAGGGAGGT+GGG | 0.481187 | 7_2:+39742315 | None:intergenic |
| GCGGCGGTGCGGTAAGGCGA+TGG | 0.481479 | 7_2:+39742132 | None:intergenic |
| CTTTCTGTATAAGCTAAGGT+TGG | 0.481628 | 7_2:+39741564 | None:intergenic |
| ACTTGGTATGTATACATGTA+AGG | 0.484192 | 7_2:+39741191 | None:intergenic |
| ACTGGATCGACTTTGACAAA+TGG | 0.484713 | 7_2:-39739670 | Msa1057630:CDS |
| GATTGCAAGGTTTCAAGCAA+TGG | 0.493478 | 7_2:+39742157 | None:intergenic |
| ATTGCAAGGTTTCAAGCAAT+GGG | 0.494837 | 7_2:+39742158 | None:intergenic |
| GTTCACGAATGTTTGTTGCC+CGG | 0.496813 | 7_2:+39741523 | None:intergenic |
| CAAGAAAATTTGGAGGATGA+AGG | 0.499133 | 7_2:+39741451 | None:intergenic |
| CACTTACAGTAGCAAAGAAA+AGG | 0.504089 | 7_2:+39742040 | None:intergenic |
| AGTTACATGTTGAGAAGAGA+GGG | 0.504978 | 7_2:+39742308 | None:intergenic |
| CTGGATCGACTTTGACAAAT+GGG | 0.507548 | 7_2:-39739669 | Msa1057630:CDS |
| GCAATAGGAGGTGGCGGCAA+GGG | 0.509694 | 7_2:+39741477 | None:intergenic |
| ACATCAACGGCACAAAGACT+TGG | 0.514481 | 7_2:+39739950 | None:intergenic |
| GTTTGTTGCCCGGGGTGGCA+AGG | 0.523171 | 7_2:+39741533 | None:intergenic |
| TCTTCTCAACATGTAACTCT+TGG | 0.524545 | 7_2:-39742303 | Msa1057630:five_prime_UTR |
| TAAGCTAAGGTTGGATTGGA+AGG | 0.526269 | 7_2:+39741573 | None:intergenic |
| TACATGTTGAGAAGAGAGGG+AGG | 0.528256 | 7_2:+39742311 | None:intergenic |
| CAAGGTTTCAAGCAATGGGT+CGG | 0.529675 | 7_2:+39742162 | None:intergenic |
| CGAATGTTTGTTGCCCGGGG+TGG | 0.532635 | 7_2:+39741528 | None:intergenic |
| ACGTCTTTCTGTATAAGCTA+AGG | 0.532929 | 7_2:+39741560 | None:intergenic |
| AGCAATAGGAGGTGGCGGCA+AGG | 0.533628 | 7_2:+39741476 | None:intergenic |
| GGCAGCAGACGGCGGCGGTG+CGG | 0.534406 | 7_2:+39742121 | None:intergenic |
| GTCCTCACATTTCGTTAGCA+TGG | 0.540870 | 7_2:-39737186 | Msa1057630:CDS |
| GGATGAAGGAGAGCAATAGG+AGG | 0.542061 | 7_2:+39741465 | None:intergenic |
| ACGGTGGCAGCAGACGGCGG+CGG | 0.543190 | 7_2:+39742116 | None:intergenic |
| TGGACGCATGCTTTGTGAAG+TGG | 0.546759 | 7_2:+39741501 | None:intergenic |
| GACGTGACACCTTGCCACCC+CGG | 0.550171 | 7_2:-39741542 | Msa1057630:CDS |
| TAAGGCGATGGCGGATTGCA+AGG | 0.550295 | 7_2:+39742144 | None:intergenic |
| AGGTTTCAAGCAATGGGTCG+GGG | 0.553901 | 7_2:+39742164 | None:intergenic |
| GAGTTACATGTTGAGAAGAG+AGG | 0.557255 | 7_2:+39742307 | None:intergenic |
| ACGTGACACCTTGCCACCCC+GGG | 0.557799 | 7_2:-39741541 | Msa1057630:CDS |
| ATGTTGAGAAGAGAGGGAGG+TGG | 0.568123 | 7_2:+39742314 | None:intergenic |
| TGAAGGAGAGCAATAGGAGG+TGG | 0.568347 | 7_2:+39741468 | None:intergenic |
| TGTTCACGGTGGGCTTGTAG+AGG | 0.575645 | 7_2:-39739597 | Msa1057630:intron |
| AACAACCTCGACTGAGAGGA+AGG | 0.577707 | 7_2:+39739616 | None:intergenic |
| TTAATGCAATGTTATGGGGA+TGG | 0.578101 | 7_2:-39741624 | Msa1057630:CDS |
| AAATCAAGAAATGTGTTACT+GGG | 0.581240 | 7_2:-39737117 | Msa1057630:CDS |
| TGGCTTATCTGAATATCTTG+AGG | 0.583122 | 7_2:+39741258 | None:intergenic |
| CAGATAGATGATAATGTGCA+TGG | 0.588913 | 7_2:-39737006 | Msa1057630:exon |
| GTAGCAAAGAAAAGGAAGGA+AGG | 0.593207 | 7_2:+39742048 | None:intergenic |
| GCTAACGAAATGTGAGGACG+TGG | 0.594436 | 7_2:+39737190 | None:intergenic |
| TACAGTAGCAAAGAAAAGGA+AGG | 0.597821 | 7_2:+39742044 | None:intergenic |
| AGGAGAGCAATAGGAGGTGG+CGG | 0.600382 | 7_2:+39741471 | None:intergenic |
| AGCATACCAAGAAAATTTGG+AGG | 0.602667 | 7_2:+39741444 | None:intergenic |
| GCGGTGCGGTAAGGCGATGG+CGG | 0.602722 | 7_2:+39742135 | None:intergenic |
| CGATTCCTTGAAGAAAGTTG+TGG | 0.614437 | 7_2:-39737146 | Msa1057630:CDS |
| GTGCATGGTATATAGAGTAA+CGG | 0.620973 | 7_2:-39736991 | Msa1057630:three_prime_UTR |
| GGCATTAATGCAATGTTATG+GGG | 0.623677 | 7_2:-39741628 | Msa1057630:CDS |
| GCATAGTTACCATCAACATG+AGG | 0.627181 | 7_2:+39741213 | None:intergenic |
| GAACCGCTCGATTCATCTAA+CGG | 0.627578 | 7_2:+39742263 | None:intergenic |
| TCAGTCGAGGTTGTTCACGG+TGG | 0.629011 | 7_2:-39739608 | Msa1057630:CDS |
| CATAGTTACCATCAACATGA+GGG | 0.639206 | 7_2:+39741214 | None:intergenic |
| CGTGAACAACCTCGACTGAG+AGG | 0.646686 | 7_2:+39739612 | None:intergenic |
| ACGCACCTTCCTCTCAGTCG+AGG | 0.647582 | 7_2:-39739621 | Msa1057630:CDS |
| TCACGAATGTTTGTTGCCCG+GGG | 0.650250 | 7_2:+39741525 | None:intergenic |
| AAGTGGGACATCAACATCAA+CGG | 0.651923 | 7_2:+39739937 | None:intergenic |
| GATCGACTTTGACAAATGGG+AGG | 0.652184 | 7_2:-39739666 | Msa1057630:CDS |
| GACCATGCTAACGAAATGTG+AGG | 0.681537 | 7_2:+39737184 | None:intergenic |
| AGTACATCAGATTGACTCAG+TGG | 0.704214 | 7_2:-39739825 | Msa1057630:CDS |
| GAACCGTTAGATGAATCGAG+CGG | 0.761145 | 7_2:-39742266 | Msa1057630:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCTTTTTCTATATAAAT+AGG | + | chr7_2:39737327-39737346 | None:intergenic | 10.0% |
| !!! | AATAATTTTTTTGAAATGTT+TGG | - | chr7_2:39738451-39738470 | Msa1057630:intron | 10.0% |
| !!! | ATAATTTTTTTGAAATGTTT+GGG | - | chr7_2:39738452-39738471 | Msa1057630:intron | 10.0% |
| !! | CTTAAAAACAAATTTAATAA+CGG | - | chr7_2:39740133-39740152 | Msa1057630:intron | 10.0% |
| !!! | TTTACATTCATATTTTTTTT+TGG | - | chr7_2:39740647-39740666 | Msa1057630:intron | 10.0% |
| !!! | CTATTTTTAAAATGAATTTT+TGG | + | chr7_2:39741711-39741730 | None:intergenic | 10.0% |
| !! | ATTAAACAAAAACTTGAAAA+AGG | + | chr7_2:39737223-39737242 | None:intergenic | 15.0% |
| !! | AAAATTATTAATCAAGTTTG+TGG | + | chr7_2:39738440-39738459 | None:intergenic | 15.0% |
| !! | ATTACATGTAAATCTTAAAA+AGG | + | chr7_2:39738937-39738956 | None:intergenic | 15.0% |
| !! | AAAAAGCAAAATATGAATAT+TGG | + | chr7_2:39739770-39739789 | None:intergenic | 15.0% |
| !! | AAAAAAATACTACTTCTTAA+AGG | + | chr7_2:39741153-39741172 | None:intergenic | 15.0% |
| !!! | TTTTCAATTGATTTTAGATA+AGG | - | chr7_2:39741485-39741504 | Msa1057630:CDS | 15.0% |
| !! | AAAACTTGAAAAAGGATTTA+AGG | + | chr7_2:39737215-39737234 | None:intergenic | 20.0% |
| !!! | AATGAACTCTTATTTATATG+TGG | - | chr7_2:39737880-39737899 | Msa1057630:intron | 20.0% |
| !! | TAAGATAATGTTAACTTACT+TGG | + | chr7_2:39738046-39738065 | None:intergenic | 20.0% |
| !! | AACAAGAATAAAAACTTACA+GGG | + | chr7_2:39739451-39739470 | None:intergenic | 20.0% |
| !! | AAACAAGAATAAAAACTTAC+AGG | + | chr7_2:39739452-39739471 | None:intergenic | 20.0% |
| !!! | TCTTGTTTTGAAAAATTGAA+CGG | - | chr7_2:39739464-39739483 | Msa1057630:intron | 20.0% |
| !!! | ATAAATAGAGGCATAAAAAT+TGG | + | chr7_2:39739669-39739688 | None:intergenic | 20.0% |
| !! | CTGATATATAATATTGTTGA+TGG | - | chr7_2:39739805-39739824 | Msa1057630:CDS | 20.0% |
| !!! | AATTCTATCATCTTTTCTAT+TGG | - | chr7_2:39740978-39740997 | Msa1057630:intron | 20.0% |
| !! | ATTATGAAATAAATGTTGGA+CGG | + | chr7_2:39741099-39741118 | None:intergenic | 20.0% |
| !! | TGCAATTATGAAATAAATGT+TGG | + | chr7_2:39741103-39741122 | None:intergenic | 20.0% |
| !! | TATATGATGATATAAGCTTT+AGG | + | chr7_2:39741183-39741202 | None:intergenic | 20.0% |
| !! | TAAATAAAATGCAAGTTTAG+CGG | + | chr7_2:39741310-39741329 | None:intergenic | 20.0% |
| !! | CTAAAAAAGCAGATATTAAT+CGG | + | chr7_2:39741416-39741435 | None:intergenic | 20.0% |
| !! | TTCACTTAGAAAATACATTA+TGG | - | chr7_2:39741679-39741698 | Msa1057630:intron | 20.0% |
| !! | TACAAAGTAAAAGTTGAAAA+TGG | - | chr7_2:39741858-39741877 | Msa1057630:intron | 20.0% |
| !!! | ATTTTTACCTGTAAATTCAA+AGG | - | chr7_2:39742141-39742160 | Msa1057630:five_prime_UTR | 20.0% |
| ! | ATGTTTAATTAAGCGATTCT+AGG | - | chr7_2:39737268-39737287 | Msa1057630:intron | 25.0% |
| ! | AAAACAACTTATAGCTTACA+TGG | + | chr7_2:39737369-39737388 | None:intergenic | 25.0% |
| !! | TTTTCATTAGTATCTGTTTC+TGG | - | chr7_2:39737524-39737543 | Msa1057630:intron | 25.0% |
| ! | AACATATGAGTAAGAAAATC+AGG | + | chr7_2:39737829-39737848 | None:intergenic | 25.0% |
| ! | ATTATTTATTTGATTGCCGA+TGG | + | chr7_2:39737863-39737882 | None:intergenic | 25.0% |
| ! | AATGAACATTCATCATGAAA+AGG | + | chr7_2:39737925-39737944 | None:intergenic | 25.0% |
| ! | AGTTAACATTATCTTAGTGT+TGG | - | chr7_2:39738050-39738069 | Msa1057630:intron | 25.0% |
| !! | TATATTTAAGACAAACGTGA+TGG | + | chr7_2:39738204-39738223 | None:intergenic | 25.0% |
| ! | TTTAATCATCATTTGTAACC+AGG | - | chr7_2:39738304-39738323 | Msa1057630:intron | 25.0% |
| !! | AATCATTTAAAGTAATACCC+TGG | - | chr7_2:39738729-39738748 | Msa1057630:intron | 25.0% |
| !! | TTGAAGCTAATTGATTCAAA+AGG | - | chr7_2:39738985-39739004 | Msa1057630:intron | 25.0% |
| ! | TCAAGCATTATAAAGTAACA+TGG | + | chr7_2:39739090-39739109 | None:intergenic | 25.0% |
| !! | TGATATTTTCTTCAAGAAAG+AGG | + | chr7_2:39739238-39739257 | None:intergenic | 25.0% |
| ! | ACAAGAATAAAAACTTACAG+GGG | + | chr7_2:39739450-39739469 | None:intergenic | 25.0% |
| ! | TGTACTAACACAATAAATAG+AGG | + | chr7_2:39739681-39739700 | None:intergenic | 25.0% |
| !!! | ATTGTTGATGGTAAAGTAAT+AGG | - | chr7_2:39739817-39739836 | Msa1057630:CDS | 25.0% |
| !!! | TTGTTGATGGTAAAGTAATA+GGG | - | chr7_2:39739818-39739837 | Msa1057630:CDS | 25.0% |
| ! | TTAAAAGTCAAAACAGATAG+TGG | + | chr7_2:39740034-39740053 | None:intergenic | 25.0% |
| ! | CAGTCCTTATTATAAAGTAT+CGG | - | chr7_2:39740279-39740298 | Msa1057630:intron | 25.0% |
| !! | AGTCCTTATTATAAAGTATC+GGG | - | chr7_2:39740280-39740299 | Msa1057630:intron | 25.0% |
| ! | TTACCCGATACTTTATAATA+AGG | + | chr7_2:39740286-39740305 | None:intergenic | 25.0% |
| ! | TAATGGAATTGTGAAAAGTT+TGG | - | chr7_2:39740324-39740343 | Msa1057630:intron | 25.0% |
| ! | TATAGTAACAGATTTCATCT+TGG | + | chr7_2:39740478-39740497 | None:intergenic | 25.0% |
| ! | AAATCTGTTACTATATGCTT+TGG | - | chr7_2:39740483-39740502 | Msa1057630:intron | 25.0% |
| !!! | TATATGCTTTGGAATTTCAA+GGG | - | chr7_2:39740494-39740513 | Msa1057630:intron | 25.0% |
| ! | ATAGAGATATTCAGAATATG+TGG | - | chr7_2:39740563-39740582 | Msa1057630:intron | 25.0% |
| ! | CATTCATTCTTTCAATTTAC+TGG | - | chr7_2:39740681-39740700 | Msa1057630:intron | 25.0% |
| !! | TTCTTGTACATCTATTTCTT+GGG | - | chr7_2:39740889-39740908 | Msa1057630:intron | 25.0% |
| ! | TAATATTCTCATCTTTGCTA+TGG | - | chr7_2:39741046-39741065 | Msa1057630:intron | 25.0% |
| !!! | CATTTTATTTGATGGATCTA+AGG | - | chr7_2:39741212-39741231 | Msa1057630:CDS | 25.0% |
| ! | AAATAAAATGCAAGTTTAGC+GGG | + | chr7_2:39741309-39741328 | None:intergenic | 25.0% |
| ! | AGAGATATATAAACAAGTCT+TGG | + | chr7_2:39741367-39741386 | None:intergenic | 25.0% |
| ! | AAAGAAACACACATTTAATG+TGG | + | chr7_2:39741468-39741487 | None:intergenic | 25.0% |
| !!! | TGCTGATTTAAAAAACAGTT+TGG | + | chr7_2:39741615-39741634 | None:intergenic | 25.0% |
| ! | AAATAACACCAGAATTATAC+AGG | + | chr7_2:39741650-39741669 | None:intergenic | 25.0% |
| !! | AAAAATGTTTTCAGTGTTTC+CGG | - | chr7_2:39741754-39741773 | Msa1057630:intron | 25.0% |
| ! | TAATTGTGATAGAAAGAAGA+TGG | + | chr7_2:39741798-39741817 | None:intergenic | 25.0% |
| !! | AAAATTGAAGTATTCTGTAC+AGG | - | chr7_2:39742002-39742021 | Msa1057630:intron | 25.0% |
| !! | AAATCAAGAAATGTGTTACT+GGG | - | chr7_2:39742100-39742119 | Msa1057630:intron | 25.0% |
| ! | TTCAATACCTTTGAATTTAC+AGG | + | chr7_2:39742151-39742170 | None:intergenic | 25.0% |
| !!! | AAAGGTATTGAATGTAAGAT+TGG | - | chr7_2:39742159-39742178 | Msa1057630:five_prime_UTR | 25.0% |
| !! | GTTGTTTTCATAAGTTATCC+TGG | - | chr7_2:39737381-39737400 | Msa1057630:intron | 30.0% |
| !! | AAAATTCATAAAGAGTGCTC+CGG | + | chr7_2:39737423-39737442 | None:intergenic | 30.0% |
| AGGCATTAATGCAATGTTAT+GGG | - | chr7_2:39737588-39737607 | Msa1057630:intron | 30.0% | |
| ! | AGGTCTTATCAAGAAAATCA+GGG | + | chr7_2:39737809-39737828 | None:intergenic | 30.0% |
| ! | ATGTTTGAAGTTCTTTCCAT+CGG | - | chr7_2:39737844-39737863 | Msa1057630:intron | 30.0% |
| AATGTTCATTGTTGTGATGA+AGG | - | chr7_2:39737935-39737954 | Msa1057630:intron | 30.0% | |
| ATGTTCATTGTTGTGATGAA+GGG | - | chr7_2:39737936-39737955 | Msa1057630:intron | 30.0% | |
| ACTTGGTATGTATACATGTA+AGG | + | chr7_2:39738029-39738048 | None:intergenic | 30.0% | |
| ! | TTTTCTGTTTTGTCATACAG+TGG | - | chr7_2:39738080-39738099 | Msa1057630:intron | 30.0% |
| TGTTGCAAAGAAAGAAAGAA+TGG | + | chr7_2:39738278-39738297 | None:intergenic | 30.0% | |
| TAACTTCAAAGAACAATTGC+AGG | + | chr7_2:39738350-39738369 | None:intergenic | 30.0% | |
| TGAAGTTATACATTCCTGTT+TGG | - | chr7_2:39738362-39738381 | Msa1057630:intron | 30.0% | |
| !! | AGAAATTTTGATGCAAGACT+TGG | + | chr7_2:39738537-39738556 | None:intergenic | 30.0% |
| ! | GGAATTTAGAGTTAGTTAGT+TGG | - | chr7_2:39738674-39738693 | Msa1057630:intron | 30.0% |
| !! | ACCTTTGAAATTTGATTCCA+GGG | + | chr7_2:39738749-39738768 | None:intergenic | 30.0% |
| AATCAAATTTCAAAGGTGGT+TGG | - | chr7_2:39738752-39738771 | Msa1057630:intron | 30.0% | |
| ATCAAATTTCAAAGGTGGTT+GGG | - | chr7_2:39738753-39738772 | Msa1057630:intron | 30.0% | |
| ACAAATTATGTAGATCCTGT+AGG | + | chr7_2:39738891-39738910 | None:intergenic | 30.0% | |
| ! | TTAAATAGTCTTGCAAACAG+TGG | + | chr7_2:39739044-39739063 | None:intergenic | 30.0% |
| ! | ATAAAGTAACATGGAAGTAC+AGG | + | chr7_2:39739081-39739100 | None:intergenic | 30.0% |
| ! | AAGCTTGAACAACTTTTACT+AGG | - | chr7_2:39739327-39739346 | Msa1057630:intron | 30.0% |
| ! | TTGAACAACTTTTACTAGGA+AGG | - | chr7_2:39739331-39739350 | Msa1057630:intron | 30.0% |
| ! | TGAACAACTTTTACTAGGAA+GGG | - | chr7_2:39739332-39739351 | Msa1057630:intron | 30.0% |
| TGCTCAAAATGACAAGTTAA+AGG | + | chr7_2:39739524-39739543 | None:intergenic | 30.0% | |
| !! | TGTTGATGGTAAAGTAATAG+GGG | - | chr7_2:39739819-39739838 | Msa1057630:CDS | 30.0% |
| TAGTAATAGGAAGGAAACAT+GGG | - | chr7_2:39739875-39739894 | Msa1057630:CDS | 30.0% | |
| GCATAATTGTAACAGTTGTT+TGG | - | chr7_2:39739909-39739928 | Msa1057630:CDS | 30.0% | |
| AGTTCGTCAGTAAGAATAAA+AGG | - | chr7_2:39739932-39739951 | Msa1057630:CDS | 30.0% | |
| GTTCGTCAGTAAGAATAAAA+GGG | - | chr7_2:39739933-39739952 | Msa1057630:CDS | 30.0% | |
| ATGAAGAATCAAGAACACTT+AGG | + | chr7_2:39740212-39740231 | None:intergenic | 30.0% | |
| ACTTTATAATAAGGACTGGA+CGG | + | chr7_2:39740277-39740296 | None:intergenic | 30.0% | |
| CGATACTTTATAATAAGGAC+TGG | + | chr7_2:39740281-39740300 | None:intergenic | 30.0% | |
| !! | AAGTATCGGGTAATTGAAAT+CGG | - | chr7_2:39740293-39740312 | Msa1057630:intron | 30.0% |
| GGTAATTGAAATCGGATTAT+TGG | - | chr7_2:39740301-39740320 | Msa1057630:intron | 30.0% | |
| TGAAATCGGATTATTGGTAA+TGG | - | chr7_2:39740307-39740326 | Msa1057630:intron | 30.0% | |
| TGAATTAACCAAGGTTCAAA+TGG | - | chr7_2:39740434-39740453 | Msa1057630:intron | 30.0% | |
| !! | CTATATGCTTTGGAATTTCA+AGG | - | chr7_2:39740493-39740512 | Msa1057630:intron | 30.0% |
| ! | TGTTGCTATTGTTGTAAACA+AGG | + | chr7_2:39740729-39740748 | None:intergenic | 30.0% |
| GTATAGACTATTCAGTTCAA+AGG | + | chr7_2:39740833-39740852 | None:intergenic | 30.0% | |
| ATATACCAAACTATTAGCAG+AGG | + | chr7_2:39740855-39740874 | None:intergenic | 30.0% | |
| ! | GTTTGGTATATAGTTTTCCT+TGG | - | chr7_2:39740864-39740883 | Msa1057630:intron | 30.0% |
| ! | CTTCTTGTACATCTATTTCT+TGG | - | chr7_2:39740888-39740907 | Msa1057630:intron | 30.0% |
| ! | AGATGATAGAATTTTGTGCA+CGG | + | chr7_2:39740971-39740990 | None:intergenic | 30.0% |
| ! | CTATCATCTTTTCTATTGGA+AGG | - | chr7_2:39740982-39741001 | Msa1057630:intron | 30.0% |
| TTTCTATTGGAAGGAAGTTT+CGG | - | chr7_2:39740991-39741010 | Msa1057630:intron | 30.0% | |
| AATAAATGTTGGACGGTAAA+GGG | + | chr7_2:39741092-39741111 | None:intergenic | 30.0% | |
| AAATAAATGTTGGACGGTAA+AGG | + | chr7_2:39741093-39741112 | None:intergenic | 30.0% | |
| ! | TTGCATGTTTTATAGTTGTG+TGG | - | chr7_2:39741118-39741137 | Msa1057630:intron | 30.0% |
| ATCCATCAAATAAAATGACG+TGG | + | chr7_2:39741209-39741228 | None:intergenic | 30.0% | |
| AGTGTTTGTAAACTACAACT+TGG | - | chr7_2:39741571-39741590 | Msa1057630:CDS | 30.0% | |
| GTGTTTGTAAACTACAACTT+GGG | - | chr7_2:39741572-39741591 | Msa1057630:CDS | 30.0% | |
| TTAAATCAGCAGTGTATGTT+AGG | - | chr7_2:39741624-39741643 | Msa1057630:CDS | 30.0% | |
| ! | AATGAGTCTCAACAGTTTTA+TGG | - | chr7_2:39741906-39741925 | Msa1057630:intron | 30.0% |
| !!! | CTTTTGAAACAACACATTCT+TGG | + | chr7_2:39741933-39741952 | None:intergenic | 30.0% |
| GAAATCAAGAAATGTGTTAC+TGG | - | chr7_2:39742099-39742118 | Msa1057630:intron | 30.0% | |
| ! | GGATGCAACCATAAATATTT+TGG | + | chr7_2:39742257-39742276 | None:intergenic | 30.0% |
| CAGTCTACATAGAATAGAAT+TGG | + | chr7_2:39742278-39742297 | None:intergenic | 30.0% | |
| AGTTACATGTTGAGAAGAGA+GGG | + | chr7_2:39736912-39736931 | None:intergenic | 35.0% | |
| TCTTCTCAACATGTAACTCT+TGG | - | chr7_2:39736914-39736933 | Msa1057630:three_prime_UTR | 35.0% | |
| !! | TCTAACGGTTCATTAGTCTT+TGG | + | chr7_2:39736942-39736961 | None:intergenic | 35.0% |
| ATTGCAAGGTTTCAAGCAAT+GGG | + | chr7_2:39737062-39737081 | None:intergenic | 35.0% | |
| TACAGTAGCAAAGAAAAGGA+AGG | + | chr7_2:39737176-39737195 | None:intergenic | 35.0% | |
| CACTTACAGTAGCAAAGAAA+AGG | + | chr7_2:39737180-39737199 | None:intergenic | 35.0% | |
| CAGGCATTAATGCAATGTTA+TGG | - | chr7_2:39737587-39737606 | Msa1057630:intron | 35.0% | |
| GGCATTAATGCAATGTTATG+GGG | - | chr7_2:39737589-39737608 | Msa1057630:intron | 35.0% | |
| TTAATGCAATGTTATGGGGA+TGG | - | chr7_2:39737593-39737612 | Msa1057630:intron | 35.0% | |
| TGTATAAGCTAAGGTTGGAT+TGG | + | chr7_2:39737651-39737670 | None:intergenic | 35.0% | |
| CTTTCTGTATAAGCTAAGGT+TGG | + | chr7_2:39737656-39737675 | None:intergenic | 35.0% | |
| ACGTCTTTCTGTATAAGCTA+AGG | + | chr7_2:39737660-39737679 | None:intergenic | 35.0% | |
| CAAGAAAATTTGGAGGATGA+AGG | + | chr7_2:39737769-39737788 | None:intergenic | 35.0% | |
| ! | CTTCATCCTCCAAATTTTCT+TGG | - | chr7_2:39737767-39737786 | Msa1057630:intron | 35.0% |
| AGCATACCAAGAAAATTTGG+AGG | + | chr7_2:39737776-39737795 | None:intergenic | 35.0% | |
| ! | TCCAAATTTTCTTGGTATGC+TGG | - | chr7_2:39737775-39737794 | Msa1057630:intron | 35.0% |
| ! | CCAAATTTTCTTGGTATGCT+GGG | - | chr7_2:39737776-39737795 | Msa1057630:intron | 35.0% |
| ! | CAGGTCTTATCAAGAAAATC+AGG | + | chr7_2:39737810-39737829 | None:intergenic | 35.0% |
| TGGCTTATCTGAATATCTTG+AGG | + | chr7_2:39737962-39737981 | None:intergenic | 35.0% | |
| TAAGCCAGACAACTAAAGTT+AGG | - | chr7_2:39737975-39737994 | Msa1057630:intron | 35.0% | |
| CATAGTTACCATCAACATGA+GGG | + | chr7_2:39738006-39738025 | None:intergenic | 35.0% | |
| ! | GTTTTGTCATACAGTGGTTA+TGG | - | chr7_2:39738086-39738105 | Msa1057630:intron | 35.0% |
| CCATGCATTTAGATTTACCT+GGG | - | chr7_2:39738171-39738190 | Msa1057630:intron | 35.0% | |
| CATCATTTGTAACCAGGTTA+AGG | - | chr7_2:39738310-39738329 | Msa1057630:intron | 35.0% | |
| ! | AATTTGAGATCACCTTAACC+TGG | + | chr7_2:39738325-39738344 | None:intergenic | 35.0% |
| AGGTTAAGGTGATCTCAAAT+TGG | - | chr7_2:39738324-39738343 | Msa1057630:intron | 35.0% | |
| !!! | TGTTTTGATCCACATTTGTG+AGG | - | chr7_2:39738397-39738416 | Msa1057630:intron | 35.0% |
| !! | TTACTTTTGCCTTGAGAACT+TGG | - | chr7_2:39738490-39738509 | Msa1057630:intron | 35.0% |
| AAAACTCTGACTGTTAGTTG+AGG | - | chr7_2:39738653-39738672 | Msa1057630:intron | 35.0% | |
| ACCCTGGAATCAAATTTCAA+AGG | - | chr7_2:39738745-39738764 | Msa1057630:intron | 35.0% | |
| !! | CACCTTTGAAATTTGATTCC+AGG | + | chr7_2:39738750-39738769 | None:intergenic | 35.0% |
| CTGGAATCAAATTTCAAAGG+TGG | - | chr7_2:39738748-39738767 | Msa1057630:intron | 35.0% | |
| TCAAATTTCAAAGGTGGTTG+GGG | - | chr7_2:39738754-39738773 | Msa1057630:intron | 35.0% | |
| CTTGAGGAATCAATTGAGAT+AGG | + | chr7_2:39738827-39738846 | None:intergenic | 35.0% | |
| !! | TCAAAAGTGTTCCTGCTTTA+AGG | - | chr7_2:39739138-39739157 | Msa1057630:intron | 35.0% |
| ! | TTTTACAGAGGACGTTAAGT+GGG | + | chr7_2:39739299-39739318 | None:intergenic | 35.0% |
| ! | TTTTTACAGAGGACGTTAAG+TGG | + | chr7_2:39739300-39739319 | None:intergenic | 35.0% |
| AAGGGAGTTTCACATAAGTT+TGG | - | chr7_2:39739350-39739369 | Msa1057630:intron | 35.0% | |
| AGGGAGTTTCACATAAGTTT+GGG | - | chr7_2:39739351-39739370 | Msa1057630:intron | 35.0% | |
| TCAATCTGATGTACTCGTAT+TGG | + | chr7_2:39739387-39739406 | None:intergenic | 35.0% | |
| AAAGGCAACAATCAGGTAAA+CGG | + | chr7_2:39739506-39739525 | None:intergenic | 35.0% | |
| ACAAGTTAAAGGCAACAATC+AGG | + | chr7_2:39739513-39739532 | None:intergenic | 35.0% | |
| GTGTTAGTACATATGCAAGT+TGG | - | chr7_2:39739690-39739709 | Msa1057630:intron | 35.0% | |
| !! | GTTGATGGTAAAGTAATAGG+GGG | - | chr7_2:39739820-39739839 | Msa1057630:CDS | 35.0% |
| GTATGGTAGTAGTAATAGGA+AGG | - | chr7_2:39739866-39739885 | Msa1057630:CDS | 35.0% | |
| GTAGTAATAGGAAGGAAACA+TGG | - | chr7_2:39739874-39739893 | Msa1057630:CDS | 35.0% | |
| GTCAGTAAGAATAAAAGGGT+GGG | - | chr7_2:39739937-39739956 | Msa1057630:CDS | 35.0% | |
| TCAGTAAGAATAAAAGGGTG+GGG | - | chr7_2:39739938-39739957 | Msa1057630:CDS | 35.0% | |
| TAACGGAATCAGAATCAAAC+AGG | - | chr7_2:39740150-39740169 | Msa1057630:intron | 35.0% | |
| AAGTTTGGAGAAGTTGTGTT+TGG | - | chr7_2:39740339-39740358 | Msa1057630:intron | 35.0% | |
| TAATTCAGCATTAGTGTTCC+AGG | - | chr7_2:39740404-39740423 | Msa1057630:intron | 35.0% | |
| TGGTTAATTCAATGTTGTCC+TGG | + | chr7_2:39740425-39740444 | None:intergenic | 35.0% | |
| GGACAACATTGAATTAACCA+AGG | - | chr7_2:39740425-39740444 | Msa1057630:intron | 35.0% | |
| ATTAACCAAGGTTCAAATGG+AGG | - | chr7_2:39740437-39740456 | Msa1057630:intron | 35.0% | |
| AAAAACCTCCATTTGAACCT+TGG | + | chr7_2:39740445-39740464 | None:intergenic | 35.0% | |
| AGTAACAGATTTCATCTTGG+AGG | + | chr7_2:39740475-39740494 | None:intergenic | 35.0% | |
| ATTCTTTGCAAGTGTCTGTA+AGG | + | chr7_2:39740537-39740556 | None:intergenic | 35.0% | |
| TACAGACACTTGCAAAGAAT+AGG | - | chr7_2:39740537-39740556 | Msa1057630:intron | 35.0% | |
| AACAACTCTTTCTCGTAAAG+CGG | - | chr7_2:39740745-39740764 | Msa1057630:intron | 35.0% | |
| TCTATCACAGGATTTAACTC+AGG | + | chr7_2:39740810-39740829 | None:intergenic | 35.0% | |
| CTATACCTCTGCTAATAGTT+TGG | - | chr7_2:39740847-39740866 | Msa1057630:intron | 35.0% | |
| ATAGATGTACAAGAAGACCA+AGG | + | chr7_2:39740884-39740903 | None:intergenic | 35.0% | |
| !! | CTCCACGTCATTTTATTTGA+TGG | - | chr7_2:39741204-39741223 | Msa1057630:CDS | 35.0% |
| GAAACACAAGACTTGTGATA+TGG | - | chr7_2:39741240-39741259 | Msa1057630:CDS | 35.0% | |
| ! | TAGTCTTCCTGAATTTTACG+AGG | - | chr7_2:39741546-39741565 | Msa1057630:CDS | 35.0% |
| ATGTTAGGCCTGTATAATTC+TGG | - | chr7_2:39741639-39741658 | Msa1057630:exon | 35.0% | |
| ! | ACTTTTACTTTGTATGCGAG+TGG | + | chr7_2:39741852-39741871 | None:intergenic | 35.0% |
| ATTTCGTTAGCATGGTCATT+GGG | - | chr7_2:39742039-39742058 | Msa1057630:intron | 35.0% | |
| CACAACTTTCTTCAAGGAAT+CGG | + | chr7_2:39742073-39742092 | None:intergenic | 35.0% | |
| ! | CAGATAGATGATAATGTGCA+TGG | - | chr7_2:39742211-39742230 | Msa1057630:five_prime_UTR | 35.0% |
| GTGCATGGTATATAGAGTAA+CGG | - | chr7_2:39742226-39742245 | Msa1057630:five_prime_UTR | 35.0% | |
| CGGATCTGCCAAAATATTTA+TGG | - | chr7_2:39742246-39742265 | Msa1057630:five_prime_UTR | 35.0% | |
| GAGTTACATGTTGAGAAGAG+AGG | + | chr7_2:39736913-39736932 | None:intergenic | 40.0% | |
| GATTGCAAGGTTTCAAGCAA+TGG | + | chr7_2:39737063-39737082 | None:intergenic | 40.0% | |
| ! | AGTTTTTCTACGACCTACGA+CGG | + | chr7_2:39737129-39737148 | None:intergenic | 40.0% |
| GTAGCAAAGAAAAGGAAGGA+AGG | + | chr7_2:39737172-39737191 | None:intergenic | 40.0% | |
| !! | TGGAAGAGTCTTGTTAACAC+CGG | - | chr7_2:39737401-39737420 | Msa1057630:intron | 40.0% |
| TCTGCACTACGAAACTTACA+AGG | + | chr7_2:39737557-39737576 | None:intergenic | 40.0% | |
| TAGTGCAGACTGAAAAATGC+AGG | - | chr7_2:39737568-39737587 | Msa1057630:intron | 40.0% | |
| ! | TAAGCTAAGGTTGGATTGGA+AGG | + | chr7_2:39737647-39737666 | None:intergenic | 40.0% |
| CCCAGCATACCAAGAAAATT+TGG | + | chr7_2:39737779-39737798 | None:intergenic | 40.0% | |
| AGCTCCTAACTTTAGTTGTC+TGG | + | chr7_2:39737982-39738001 | None:intergenic | 40.0% | |
| GCATAGTTACCATCAACATG+AGG | + | chr7_2:39738007-39738026 | None:intergenic | 40.0% | |
| GCCATGCATTTAGATTTACC+TGG | - | chr7_2:39738170-39738189 | Msa1057630:intron | 40.0% | |
| CCCAGGTAAATCTAAATGCA+TGG | + | chr7_2:39738174-39738193 | None:intergenic | 40.0% | |
| AACGTGATGGTTAATTTCCC+AGG | + | chr7_2:39738191-39738210 | None:intergenic | 40.0% | |
| CATGCAATAACAGTCCAAAC+AGG | + | chr7_2:39738379-39738398 | None:intergenic | 40.0% | |
| TCCACATTTGTGAGGCAAAT+AGG | - | chr7_2:39738405-39738424 | Msa1057630:intron | 40.0% | |
| ACCTATTTGCCTCACAAATG+TGG | + | chr7_2:39738409-39738428 | None:intergenic | 40.0% | |
| ACTTAGTGACCAAGTTCTCA+AGG | + | chr7_2:39738502-39738521 | None:intergenic | 40.0% | |
| CTTACCATCTCTAACAGTCT+CGG | + | chr7_2:39738702-39738721 | None:intergenic | 40.0% | |
| ! | TTTTATCTCGTCGAACGCTT+AGG | - | chr7_2:39739008-39739027 | Msa1057630:intron | 40.0% |
| AAGTGGGACATCAACATCAA+CGG | + | chr7_2:39739283-39739302 | None:intergenic | 40.0% | |
| !!! | GCTTCTCGTCATTTTTACAG+AGG | + | chr7_2:39739311-39739330 | None:intergenic | 40.0% |
| ! | AGTACATCAGATTGACTCAG+TGG | - | chr7_2:39739392-39739411 | Msa1057630:intron | 40.0% |
| AAGGCAACAATCAGGTAAAC+GGG | + | chr7_2:39739505-39739524 | None:intergenic | 40.0% | |
| !!! | TTGTCATTTTGAGCAGCTAC+TGG | - | chr7_2:39739529-39739548 | Msa1057630:intron | 40.0% |
| ! | ACTGGATCGACTTTGACAAA+TGG | - | chr7_2:39739547-39739566 | Msa1057630:intron | 40.0% |
| ! | CTGGATCGACTTTGACAAAT+GGG | - | chr7_2:39739548-39739567 | Msa1057630:intron | 40.0% |
| GAGCGTATGGTAGTAGTAAT+AGG | - | chr7_2:39739862-39739881 | Msa1057630:CDS | 40.0% | |
| CGTCAGTAAGAATAAAAGGG+TGG | - | chr7_2:39739936-39739955 | Msa1057630:CDS | 40.0% | |
| TAAGAATAAAAGGGTGGGGA+GGG | - | chr7_2:39739942-39739961 | Msa1057630:CDS | 40.0% | |
| TTGTGTTTGGAAGCTGAACA+TGG | - | chr7_2:39740352-39740371 | Msa1057630:intron | 40.0% | |
| ACAACTCTTTCTCGTAAAGC+GGG | - | chr7_2:39740746-39740765 | Msa1057630:intron | 40.0% | |
| ACAGGATTTAACTCAGGCTA+GGG | + | chr7_2:39740804-39740823 | None:intergenic | 40.0% | |
| TCAGTTCAAAGGTCTATCAC+AGG | + | chr7_2:39740822-39740841 | None:intergenic | 40.0% | |
| ACACTGACCTCGTAAAATTC+AGG | + | chr7_2:39741556-39741575 | None:intergenic | 40.0% | |
| ! | TGCGAGTGGTTGCAAAATTT+TGG | + | chr7_2:39741838-39741857 | None:intergenic | 40.0% |
| CATTTCGTTAGCATGGTCAT+TGG | - | chr7_2:39742038-39742057 | Msa1057630:intron | 40.0% | |
| CGATTCCTTGAAGAAAGTTG+TGG | - | chr7_2:39742071-39742090 | Msa1057630:five_prime_UTR | 40.0% | |
| GTCATCCACAACTTTCTTCA+AGG | + | chr7_2:39742079-39742098 | None:intergenic | 40.0% | |
| TACATGTTGAGAAGAGAGGG+AGG | + | chr7_2:39736909-39736928 | None:intergenic | 45.0% | |
| GAACCGTTAGATGAATCGAG+CGG | - | chr7_2:39736951-39736970 | Msa1057630:three_prime_UTR | 45.0% | |
| GAACCGCTCGATTCATCTAA+CGG | + | chr7_2:39736957-39736976 | None:intergenic | 45.0% | |
| AAGGTTTCAAGCAATGGGTC+GGG | + | chr7_2:39737057-39737076 | None:intergenic | 45.0% | |
| CAAGGTTTCAAGCAATGGGT+CGG | + | chr7_2:39737058-39737077 | None:intergenic | 45.0% | |
| GGTGTTAACAAGACTCTTCC+AGG | + | chr7_2:39737402-39737421 | None:intergenic | 45.0% | |
| ! | TTCACGAATGTTTGTTGCCC+GGG | + | chr7_2:39737696-39737715 | None:intergenic | 45.0% |
| ! | GTTCACGAATGTTTGTTGCC+CGG | + | chr7_2:39737697-39737716 | None:intergenic | 45.0% |
| AAGTCACTGCACCTTAAAGC+AGG | + | chr7_2:39739152-39739171 | None:intergenic | 45.0% | |
| !! | GCTTTAAGGTGCAGTGACTT+TGG | - | chr7_2:39739152-39739171 | Msa1057630:intron | 45.0% |
| ACATCAACGGCACAAAGACT+TGG | + | chr7_2:39739270-39739289 | None:intergenic | 45.0% | |
| ! | GATCGACTTTGACAAATGGG+AGG | - | chr7_2:39739551-39739570 | Msa1057630:intron | 45.0% |
| GTAAGAATAAAAGGGTGGGG+AGG | - | chr7_2:39739941-39739960 | Msa1057630:CDS | 45.0% | |
| AAGAATAAAAGGGTGGGGAG+GGG | - | chr7_2:39739943-39739962 | Msa1057630:CDS | 45.0% | |
| AATAAGGACTGGACGGTAAG+AGG | + | chr7_2:39740270-39740289 | None:intergenic | 45.0% | |
| CAACTCTTTCTCGTAAAGCG+GGG | - | chr7_2:39740747-39740766 | Msa1057630:intron | 45.0% | |
| TAACTCAGGCTAGGGAATCA+TGG | + | chr7_2:39740796-39740815 | None:intergenic | 45.0% | |
| CACAGGATTTAACTCAGGCT+AGG | + | chr7_2:39740805-39740824 | None:intergenic | 45.0% | |
| CGACAAAGGGTTAGACATGA+CGG | + | chr7_2:39740922-39740941 | None:intergenic | 45.0% | |
| CATGCAGAAGACTCGACAAA+GGG | + | chr7_2:39740935-39740954 | None:intergenic | 45.0% | |
| ACATGCAGAAGACTCGACAA+AGG | + | chr7_2:39740936-39740955 | None:intergenic | 45.0% | |
| AGTTTAGCGGGAGATACACA+GGG | + | chr7_2:39741297-39741316 | None:intergenic | 45.0% | |
| AAGTTTAGCGGGAGATACAC+AGG | + | chr7_2:39741298-39741317 | None:intergenic | 45.0% | |
| AGTGTTTCCGGAATCTCTCT+AGG | - | chr7_2:39741766-39741785 | Msa1057630:intron | 45.0% | |
| GAAGCTACCTAGAGAGATTC+CGG | + | chr7_2:39741776-39741795 | None:intergenic | 45.0% | |
| GTCCTCACATTTCGTTAGCA+TGG | - | chr7_2:39742031-39742050 | Msa1057630:intron | 45.0% | |
| GACCATGCTAACGAAATGTG+AGG | + | chr7_2:39742036-39742055 | None:intergenic | 45.0% | |
| AGGTTTCAAGCAATGGGTCG+GGG | + | chr7_2:39737056-39737075 | None:intergenic | 50.0% | |
| ! | TCACGAATGTTTGTTGCCCG+GGG | + | chr7_2:39737695-39737714 | None:intergenic | 50.0% |
| TGGACGCATGCTTTGTGAAG+TGG | + | chr7_2:39737719-39737738 | None:intergenic | 50.0% | |
| TGAAGGAGAGCAATAGGAGG+TGG | + | chr7_2:39737752-39737771 | None:intergenic | 50.0% | |
| GGATGAAGGAGAGCAATAGG+AGG | + | chr7_2:39737755-39737774 | None:intergenic | 50.0% | |
| GGAGGATGAAGGAGAGCAAT+AGG | + | chr7_2:39737758-39737777 | None:intergenic | 50.0% | |
| AGGAGCTTCCCTCATGTTGA+TGG | - | chr7_2:39737995-39738014 | Msa1057630:intron | 50.0% | |
| GGAACCGAGACTGTTAGAGA+TGG | - | chr7_2:39738695-39738714 | Msa1057630:intron | 50.0% | |
| CCATTGAGCCCAGGAAAACT+CGG | - | chr7_2:39738849-39738868 | Msa1057630:intron | 50.0% | |
| AACAACCTCGACTGAGAGGA+AGG | + | chr7_2:39739604-39739623 | None:intergenic | 50.0% | |
| CTCTCAGTCGAGGTTGTTCA+CGG | - | chr7_2:39739606-39739625 | Msa1057630:CDS | 50.0% | |
| TGCTTAATGTGTGTCGCGAG+TGG | - | chr7_2:39739743-39739762 | Msa1057630:intron | 50.0% | |
| ! | CTTCCTAGTAGGAGAGCGTA+TGG | - | chr7_2:39739849-39739868 | Msa1057630:CDS | 50.0% |
| CTACCATACGCTCTCCTACT+AGG | + | chr7_2:39739855-39739874 | None:intergenic | 50.0% | |
| TCTTTCTCGTAAAGCGGGGT+CGG | - | chr7_2:39740751-39740770 | Msa1057630:intron | 50.0% | |
| CAAAGGGTTAGACATGACGG+AGG | + | chr7_2:39740919-39740938 | None:intergenic | 50.0% | |
| GCTAACGAAATGTGAGGACG+TGG | + | chr7_2:39742030-39742049 | None:intergenic | 50.0% | |
| !! | TAAGGCGATGGCGGATTGCA+AGG | + | chr7_2:39737076-39737095 | None:intergenic | 55.0% |
| TCTACGACCTACGACGGAGA+CGG | + | chr7_2:39737123-39737142 | None:intergenic | 55.0% | |
| AGGAGAGCAATAGGAGGTGG+CGG | + | chr7_2:39737749-39737768 | None:intergenic | 55.0% | |
| ! | CCGAGTTTTCCTGGGCTCAA+TGG | + | chr7_2:39738852-39738871 | None:intergenic | 55.0% |
| TGAGCCCAGGAAAACTCGGT+CGG | - | chr7_2:39738853-39738872 | Msa1057630:intron | 55.0% | |
| ! | CCATCCGACCGAGTTTTCCT+GGG | + | chr7_2:39738860-39738879 | None:intergenic | 55.0% |
| ! | ACCATCCGACCGAGTTTTCC+TGG | + | chr7_2:39738861-39738880 | None:intergenic | 55.0% |
| CGGATGGTCTGATCACCTAC+AGG | - | chr7_2:39738873-39738892 | Msa1057630:intron | 55.0% | |
| CGTGAACAACCTCGACTGAG+AGG | + | chr7_2:39739608-39739627 | None:intergenic | 55.0% | |
| TCAGTCGAGGTTGTTCACGG+TGG | - | chr7_2:39739609-39739628 | Msa1057630:CDS | 55.0% | |
| CAGTCGAGGTTGTTCACGGT+GGG | - | chr7_2:39739610-39739629 | Msa1057630:CDS | 55.0% | |
| ! | TGTTCACGGTGGGCTTGTAG+AGG | - | chr7_2:39739620-39739639 | Msa1057630:CDS | 55.0% |
| GGTGGGGAGGGGAATTGAAA+AGG | - | chr7_2:39739954-39739973 | Msa1057630:CDS | 55.0% | |
| GTAAAGCGGGGTCGGTTACA+TGG | - | chr7_2:39740759-39740778 | Msa1057630:intron | 55.0% | |
| AAGCAATGGGTCGGGGACAC+TGG | + | chr7_2:39737049-39737068 | None:intergenic | 60.0% | |
| ! | CGAATGTTTGTTGCCCGGGG+TGG | + | chr7_2:39737692-39737711 | None:intergenic | 60.0% |
| ! | GCAATAGGAGGTGGCGGCAA+GGG | + | chr7_2:39737743-39737762 | None:intergenic | 60.0% |
| ! | AGCAATAGGAGGTGGCGGCA+AGG | + | chr7_2:39737744-39737763 | None:intergenic | 60.0% |
| CCTGGGCTCAATGGAGCTTG+AGG | + | chr7_2:39738843-39738862 | None:intergenic | 60.0% | |
| CCTCAAGCTCCATTGAGCCC+AGG | - | chr7_2:39738840-39738859 | Msa1057630:intron | 60.0% | |
| CCCAGGAAAACTCGGTCGGA+TGG | - | chr7_2:39738857-39738876 | Msa1057630:intron | 60.0% | |
| ACGCACCTTCCTCTCAGTCG+AGG | - | chr7_2:39739596-39739615 | Msa1057630:intron | 60.0% | |
| GGGGGCTGAGACTTCCTAGT+AGG | - | chr7_2:39739838-39739857 | Msa1057630:CDS | 60.0% | |
| ACGGAGACGGTGGCAGCAGA+CGG | + | chr7_2:39737110-39737129 | None:intergenic | 65.0% | |
| ACGACCTACGACGGAGACGG+TGG | + | chr7_2:39737120-39737139 | None:intergenic | 65.0% | |
| GACGTGACACCTTGCCACCC+CGG | - | chr7_2:39737675-39737694 | Msa1057630:CDS | 65.0% | |
| ACGTGACACCTTGCCACCCC+GGG | - | chr7_2:39737676-39737695 | Msa1057630:CDS | 65.0% | |
| ! | GTTTGTTGCCCGGGGTGGCA+AGG | + | chr7_2:39737687-39737706 | None:intergenic | 65.0% |
| GCGGTGCGGTAAGGCGATGG+CGG | + | chr7_2:39737085-39737104 | None:intergenic | 70.0% | |
| GAGACGGTGGCAGCAGACGG+CGG | + | chr7_2:39737107-39737126 | None:intergenic | 70.0% | |
| GCTGCCACCGTCTCCGTCGT+AGG | - | chr7_2:39737113-39737132 | Msa1057630:CDS | 70.0% | |
| ! | TAGGAGGTGGCGGCAAGGGC+TGG | + | chr7_2:39737739-39737758 | None:intergenic | 70.0% |
| GCGGCGGTGCGGTAAGGCGA+TGG | + | chr7_2:39737088-39737107 | None:intergenic | 75.0% | |
| CAGACGGCGGCGGTGCGGTA+AGG | + | chr7_2:39737094-39737113 | None:intergenic | 75.0% | |
| ACGGTGGCAGCAGACGGCGG+CGG | + | chr7_2:39737104-39737123 | None:intergenic | 75.0% | |
| ! | GGCAGCAGACGGCGGCGGTG+CGG | + | chr7_2:39737099-39737118 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 39736904 | 39742335 | 39736904 | ID=Msa1057630;Name=Msa1057630 |
| chr7_2 | mRNA | 39736904 | 39742335 | 39736904 | ID=Msa1057630-mRNA-1;Parent=Msa1057630;Name=Msa1057630-mRNA-1;_AED=0.13;_eAED=0.13;_QI=282|1|1|1|0.71|0.62|8|114|301 |
| chr7_2 | exon | 39736904 | 39737215 | 39736904 | ID=Msa1057630-mRNA-1:exon:7423;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39737672 | 39737737 | 39737672 | ID=Msa1057630-mRNA-1:exon:7422;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39739598 | 39739694 | 39739598 | ID=Msa1057630-mRNA-1:exon:7421;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39739788 | 39740037 | 39739788 | ID=Msa1057630-mRNA-1:exon:7420;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39741193 | 39741282 | 39741193 | ID=Msa1057630-mRNA-1:exon:7419;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39741451 | 39741668 | 39741451 | ID=Msa1057630-mRNA-1:exon:7418;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39742047 | 39742110 | 39742047 | ID=Msa1057630-mRNA-1:exon:7417;Parent=Msa1057630-mRNA-1 |
| chr7_2 | exon | 39742131 | 39742335 | 39742131 | ID=Msa1057630-mRNA-1:exon:7416;Parent=Msa1057630-mRNA-1 |
| chr7_2 | five_prime_UTR | 39742131 | 39742335 | 39742131 | ID=Msa1057630-mRNA-1:five_prime_utr;Parent=Msa1057630-mRNA-1 |
| chr7_2 | five_prime_UTR | 39742047 | 39742110 | 39742047 | ID=Msa1057630-mRNA-1:five_prime_utr;Parent=Msa1057630-mRNA-1 |
| chr7_2 | five_prime_UTR | 39741656 | 39741668 | 39741656 | ID=Msa1057630-mRNA-1:five_prime_utr;Parent=Msa1057630-mRNA-1 |
| chr7_2 | CDS | 39741451 | 39741655 | 39741451 | ID=Msa1057630-mRNA-1:cds;Parent=Msa1057630-mRNA-1 |
| chr7_2 | CDS | 39741193 | 39741282 | 39741193 | ID=Msa1057630-mRNA-1:cds;Parent=Msa1057630-mRNA-1 |
| chr7_2 | CDS | 39739788 | 39740037 | 39739788 | ID=Msa1057630-mRNA-1:cds;Parent=Msa1057630-mRNA-1 |
| chr7_2 | CDS | 39739598 | 39739694 | 39739598 | ID=Msa1057630-mRNA-1:cds;Parent=Msa1057630-mRNA-1 |
| chr7_2 | CDS | 39737672 | 39737737 | 39737672 | ID=Msa1057630-mRNA-1:cds;Parent=Msa1057630-mRNA-1 |
| chr7_2 | CDS | 39737018 | 39737215 | 39737018 | ID=Msa1057630-mRNA-1:cds;Parent=Msa1057630-mRNA-1 |
| chr7_2 | three_prime_UTR | 39736904 | 39737017 | 39736904 | ID=Msa1057630-mRNA-1:three_prime_utr;Parent=Msa1057630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
