AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1059240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1059240 MtrunA17_Chr7g0235161 98.399 562 4 3 1 559 1 560 0.0 1143
Msa1059240 MtrunA17_Chr6g0456071 64.781 548 179 6 14 559 20 555 0.0 736
Msa1059240 MtrunA17_Chr8g0351091 56.691 411 172 4 150 557 203 610 1.68e-166 486
Msa1059240 MtrunA17_Chr7g0246371 57.317 410 169 4 150 557 257 662 5.46e-159 469
Msa1059240 MtrunA17_Chr2g0290961 54.015 411 179 5 150 557 262 665 7.92e-157 463
Msa1059240 MtrunA17_Chr3g0138381 53.865 401 181 3 159 557 265 663 4.74e-154 456
Msa1059240 MtrunA17_Chr8g0383241 49.640 417 201 3 143 558 82 490 7.57e-148 434
Msa1059240 MtrunA17_Chr2g0283461 44.885 479 244 7 81 557 72 532 9.38e-147 433
Msa1059240 MtrunA17_Chr4g0061711 42.315 553 276 12 12 555 14 532 6.87e-144 426
Msa1059240 MtrunA17_Chr2g0308241 44.647 439 230 6 124 558 106 535 3.41e-130 390
Msa1059240 MtrunA17_Chr2g0277591 40.625 480 239 9 81 557 72 508 7.60e-121 365
Msa1059240 MtrunA17_Chr7g0218571 44.089 406 205 8 173 557 131 535 1.69e-114 350
Msa1059240 MtrunA17_Chr2g0319311 42.118 425 226 6 153 557 115 539 3.71e-114 350
Msa1059240 MtrunA17_Chr4g0076011 41.791 402 209 5 181 557 70 471 2.50e-106 327
Msa1059240 MtrunA17_Chr6g0454101 42.788 416 213 9 163 557 119 530 6.37e-100 312
Msa1059240 MtrunA17_Chr3g0097091 38.520 392 218 7 180 555 142 526 7.89e-90 286
Msa1059240 MtrunA17_Chr7g0260711 33.603 494 256 9 107 557 188 652 9.84e-87 281
Msa1059240 MtrunA17_Chr1g0184751 36.538 416 225 7 150 557 213 597 1.19e-84 275
Msa1059240 MtrunA17_Chr4g0076331 50.000 198 69 3 362 556 1 171 3.24e-57 189
Msa1059240 MtrunA17_Chr7g0245621 35.326 368 208 7 196 556 298 642 1.59e-56 200
Msa1059240 MtrunA17_Chr5g0414981 25.776 322 197 9 235 544 79 370 7.55e-24 104
Msa1059240 MtrunA17_Chr4g0066331 32.124 193 118 6 363 544 145 335 6.04e-23 100
Msa1059240 MtrunA17_Chr3g0127611 30.526 190 124 5 363 544 140 329 1.38e-22 99.4
Msa1059240 MtrunA17_Chr7g0259321 30.857 175 116 3 363 532 151 325 4.81e-22 97.8
Msa1059240 MtrunA17_Chr6g0451981 30.000 200 125 7 339 529 146 339 6.80e-21 94.7
Msa1059240 MtrunA17_Chr7g0269751 25.786 318 188 11 234 540 61 341 1.74e-20 93.2
Msa1059240 MtrunA17_Chr3g0141321 27.778 198 134 5 363 551 139 336 2.50e-18 86.7
Msa1059240 MtrunA17_Chr1g0154521 29.648 199 130 6 363 551 165 363 2.00e-17 84.3
Msa1059240 MtrunA17_Chr5g0403501 28.643 199 133 6 363 552 166 364 1.84e-16 81.3
Msa1059240 MtrunA17_Chr8g0373671 26.866 201 136 6 363 552 142 342 7.59e-16 79.3
Msa1059240 MtrunA17_Chr1g0196511 30.286 175 117 4 363 532 154 328 5.12e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1059240 AT3G25140.1 87.879 495 60 0 65 559 65 559 0.0 930
Msa1059240 AT3G02350.1 67.824 547 166 4 14 559 24 561 0.0 748
Msa1059240 AT3G61130.1 53.437 451 200 6 111 557 227 671 4.89e-170 498
Msa1059240 AT5G47780.1 53.349 418 189 3 142 558 203 615 1.85e-159 469
Msa1059240 AT4G38270.2 54.476 391 175 2 170 557 284 674 1.28e-152 453
Msa1059240 AT4G38270.1 54.476 391 175 2 170 557 288 678 1.41e-152 453
Msa1059240 AT1G18580.1 48.649 407 201 5 153 555 132 534 3.67e-143 424
Msa1059240 AT2G46480.3 49.880 415 204 3 143 555 124 536 3.44e-142 422
Msa1059240 AT2G46480.4 49.880 415 204 3 143 555 137 549 4.92e-142 422
Msa1059240 AT2G20810.1 45.106 470 241 9 98 557 73 535 4.68e-133 398
Msa1059240 AT2G46480.2 46.506 415 193 4 143 555 124 511 2.08e-126 380
Msa1059240 AT2G46480.1 46.506 415 193 4 143 555 137 524 4.22e-126 380
Msa1059240 AT5G54690.1 41.256 446 235 6 138 557 88 532 8.34e-114 349
Msa1059240 AT3G01040.2 44.643 392 195 7 187 557 140 530 2.91e-107 332
Msa1059240 AT3G01040.3 44.643 392 195 7 187 557 140 530 2.91e-107 332
Msa1059240 AT5G15470.1 44.304 395 192 8 187 557 140 530 3.94e-105 326
Msa1059240 AT1G06780.1 40.238 420 219 5 143 557 195 587 7.01e-99 312
Msa1059240 AT1G06780.2 40.238 420 219 5 143 557 208 600 8.79e-99 312
Msa1059240 AT3G01040.1 42.636 387 177 9 187 557 140 497 5.62e-95 299
Msa1059240 AT2G30575.1 38.480 421 224 5 143 557 217 608 5.36e-94 300
Msa1059240 AT3G58790.1 34.829 468 258 11 124 555 80 536 5.68e-84 271
Msa1059240 AT3G58790.2 37.688 398 215 9 182 555 16 404 3.40e-83 265
Msa1059240 AT2G38650.2 32.091 483 286 11 77 556 173 616 9.71e-60 209
Msa1059240 AT2G38650.1 32.091 483 286 11 77 556 173 616 9.71e-60 209
Msa1059240 AT2G38650.3 31.714 391 226 10 77 465 173 524 7.30e-38 147
Msa1059240 AT1G70090.1 25.321 312 191 10 245 544 78 359 4.13e-22 99.0
Msa1059240 AT1G70090.2 25.321 312 191 10 245 544 78 359 4.13e-22 99.0
Msa1059240 AT3G06260.1 29.167 192 124 5 363 544 150 339 4.77e-22 98.2
Msa1059240 AT3G62660.1 28.507 221 144 7 333 544 138 353 1.16e-21 97.4
Msa1059240 AT4G02130.3 30.000 190 125 5 363 544 150 339 1.99e-21 96.3
Msa1059240 AT4G02130.1 30.000 190 125 5 363 544 150 339 1.99e-21 96.3
Msa1059240 AT4G02130.2 30.000 190 125 5 363 544 150 339 1.99e-21 96.3
Msa1059240 AT1G24170.1 24.359 312 194 9 245 544 81 362 5.33e-21 95.9
Msa1059240 AT1G02720.1 27.354 223 148 7 331 544 137 354 3.09e-20 93.2
Msa1059240 AT1G02720.2 27.354 223 148 7 331 544 137 354 3.09e-20 93.2
Msa1059240 AT3G28340.1 27.315 216 142 7 339 544 136 346 1.03e-19 91.7
Msa1059240 AT1G19300.1 27.638 199 135 6 363 552 150 348 6.66e-17 82.8
Msa1059240 AT1G13250.1 28.947 190 127 4 363 544 144 333 7.33e-16 79.7
Msa1059240 AT3G50760.1 28.079 203 134 7 361 551 134 336 7.81e-14 73.6

Find 141 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAAATGGACAAATATTT+AGG 0.200677 7_2:+45027309 None:intergenic
GGATAAATCATGGCATGTTT+TGG 0.227205 7_2:-45026262 Msa1059240:CDS
TGCAACTTAGGATACATTTC+TGG 0.227262 7_2:+45027267 None:intergenic
TGGAATGAATTTCTTTGATT+TGG 0.245500 7_2:-45027049 Msa1059240:CDS
TTTGGATTCTCCATTGAAAA+TGG 0.248622 7_2:-45025776 Msa1059240:three_prime_UTR
AAGGCTTGTGCATGGGCTTA+TGG 0.287804 7_2:-45027069 Msa1059240:CDS
TTGTTTAATTTGAGGTTGTT+TGG 0.295653 7_2:-45025794 Msa1059240:three_prime_UTR
TTGAGAGCTCAAAACTTGTT+AGG 0.300338 7_2:-45028061 Msa1059240:CDS
ATATAAACAATTATGAGATT+TGG 0.303719 7_2:-45028993 Msa1059240:five_prime_UTR
GGAGCTGTAGAAACATGTTT+TGG 0.308468 7_2:-45027159 Msa1059240:CDS
CCTTCACTTCCTTCTCCAAT+TGG 0.322458 7_2:+45027934 None:intergenic
TCATGTACTGTGCATATCTA+TGG 0.324926 7_2:+45027130 None:intergenic
CTCGATAAGGAGATCTGTTT+TGG 0.326073 7_2:-45028192 Msa1059240:CDS
ATCTCATCCATGCTGATGCT+TGG 0.329308 7_2:+45026225 None:intergenic
TTTGTTCAGGCCTGCAATTT+TGG 0.332215 7_2:-45026093 Msa1059240:CDS
CCTCAAATTAAACAAGTAAT+TGG 0.333567 7_2:+45025802 None:intergenic
AACCGAACATTATGGAAATT+AGG 0.336481 7_2:-45026333 Msa1059240:CDS
TTGGTTATCGAAGGACTCTT+TGG 0.346886 7_2:+45027875 None:intergenic
GTAGTTCAGAAGGACCTTAC+TGG 0.348203 7_2:-45027216 Msa1059240:CDS
GAATCTCAAATGATTCAAAA+TGG 0.356380 7_2:+45027296 None:intergenic
TCTTCAACTTCCGGAGGAAT+AGG 0.356969 7_2:+45027666 None:intergenic
CCAATTACTTGTTTAATTTG+AGG 0.365085 7_2:-45025802 Msa1059240:three_prime_UTR
AGATTAGGATCTTCAACTTC+CGG 0.365183 7_2:+45027657 None:intergenic
TGTTTAGATACCAAAATTGC+AGG 0.378793 7_2:+45026083 None:intergenic
CTGGCACATAAGAAGAATTC+AGG 0.379624 7_2:+45027430 None:intergenic
AGCTGAGGATCATAAGTCTT+TGG 0.384718 7_2:-45028120 Msa1059240:CDS
AATAAAACTTTATGCAACTT+AGG 0.395523 7_2:+45027255 None:intergenic
TTCCTAATTTCCATAATGTT+CGG 0.406101 7_2:+45026331 None:intergenic
TGTAACCGACAAGATGAATC+TGG 0.408758 7_2:-45027532 Msa1059240:CDS
TGTGCCAGTCCTTCGACAAC+TGG 0.414967 7_2:-45027415 Msa1059240:CDS
GCAAGTGATGTTCAAGTTGA+AGG 0.415890 7_2:-45027502 Msa1059240:CDS
TGAATCGGTGGTTCGCCAAT+TGG 0.416083 7_2:-45027949 Msa1059240:CDS
ACACAACGAATATGAAGTTC+AGG 0.426076 7_2:-45027335 Msa1059240:CDS
TGGAGCTCACATTGAGGTTA+AGG 0.431929 7_2:-45027472 Msa1059240:CDS
TATGATCCTCAGCTTGCTTA+CGG 0.432749 7_2:+45028129 None:intergenic
GCACAGAAGAGTATCATTAC+TGG 0.434927 7_2:-45027005 Msa1059240:CDS
AGAAGGACCTTACTGGACTA+TGG 0.436906 7_2:-45027209 Msa1059240:CDS
GTATCATTACTGGCAGAATC+TGG 0.437903 7_2:-45026995 Msa1059240:intron
TCTCATCCATGCTGATGCTT+GGG 0.440945 7_2:+45026226 None:intergenic
TGTCGAATTAGAGTTTGTTC+AGG 0.444770 7_2:-45026106 Msa1059240:CDS
CCCTCATCGATATACTTCTC+TGG 0.445907 7_2:+45027693 None:intergenic
TGGACTATGGAAGATTGATA+TGG 0.447546 7_2:-45027196 Msa1059240:CDS
TTGTACTAGGATTCTGATGA+TGG 0.450391 7_2:-45028236 Msa1059240:intron
AGAATGAGAACCGAACATTA+TGG 0.455370 7_2:-45026341 Msa1059240:CDS
TAATGATATGAATAAATAAG+AGG 0.461829 7_2:+45025869 None:intergenic
TGATGAGCAAACCTCGATAC+AGG 0.462445 7_2:-45028004 Msa1059240:CDS
CGAACCACCGATTCATCAAC+AGG 0.463334 7_2:+45027957 None:intergenic
ATTTCTTTGATTTGGATGCT+TGG 0.467532 7_2:-45027041 Msa1059240:CDS
GTTAACGAAGGCGAAGAAGC+AGG 0.471355 7_2:-45027805 Msa1059240:CDS
GATGATGGTGGTGTTGCTCA+TGG 0.474346 7_2:-45028221 Msa1059240:CDS
AAAACTACACGCCAGGTGAT+TGG 0.474929 7_2:-45027903 Msa1059240:CDS
TGACTCAATTCAAGCCACTT+TGG 0.481495 7_2:-45026143 Msa1059240:CDS
TCTCAAAGTAAAATTTCTGC+AGG 0.482721 7_2:+45027382 None:intergenic
AGCTCCCAGATTCATCTTGT+CGG 0.483406 7_2:+45027527 None:intergenic
CTCATGGATTCGACTCGATA+AGG 0.486801 7_2:-45028205 Msa1059240:CDS
TAAGCCCATGCACAAGCCTT+CGG 0.491668 7_2:+45027072 None:intergenic
AAGGCGTAGTGATATAGATT+AGG 0.494787 7_2:+45027642 None:intergenic
AGAACCTTAGCTAAACGTAT+AGG 0.496193 7_2:+45025965 None:intergenic
GATAGACAATGCAAGCTCTT+CGG 0.502520 7_2:+45027747 None:intergenic
AAGTTTCTTCTCTTCTCACT+TGG 0.503263 7_2:-45026054 Msa1059240:three_prime_UTR
GTAAAATTTCTGCAGGTTAG+CGG 0.505828 7_2:+45027389 None:intergenic
GATATGGATGGCAAGGTGAA+TGG 0.512206 7_2:-45027180 Msa1059240:CDS
TCATCATCAACAACAAAACT+TGG 0.513077 7_2:-45028760 Msa1059240:intron
TGCAGTTCCTGTTGATGAAT+CGG 0.514874 7_2:-45027964 Msa1059240:CDS
TCAACTTCTGAATCTTCAGT+TGG 0.515653 7_2:+45027856 None:intergenic
TTGATTTGGATGCTTGGAGA+AGG 0.516586 7_2:-45027035 Msa1059240:CDS
TTAAATTTAGCTTTGATCAA+CGG 0.520338 7_2:+45027096 None:intergenic
ACATGAAACACGTGCTTCCA+CGG 0.525426 7_2:+45027555 None:intergenic
CGCCTCTGTTGTGGTTAACT+CGG 0.528358 7_2:-45027598 Msa1059240:CDS
GCAGCAGTGGTGCATTTCAA+TGG 0.530648 7_2:-45026195 Msa1059240:CDS
CTTTGGCTTCACCAATCACC+TGG 0.531350 7_2:+45027892 None:intergenic
CAAAGCTAAATTTAATCCGA+AGG 0.531952 7_2:-45027088 Msa1059240:CDS
CGAAGCCACTGGATAAATCA+TGG 0.532470 7_2:-45026272 Msa1059240:CDS
AAACGGATCCGCTCAAGCCT+CGG 0.542028 7_2:-45028163 Msa1059240:CDS
TTACTCAACAACGAAGCCAC+TGG 0.544084 7_2:-45026283 Msa1059240:CDS
ACTGAAGATTCAGAAGTTGA+AGG 0.545368 7_2:-45027853 Msa1059240:CDS
CCAGAGAAGTATATCGATGA+GGG 0.548643 7_2:-45027693 Msa1059240:CDS
CAATCTTCCATAGTCCAGTA+AGG 0.549931 7_2:+45027202 None:intergenic
GTGAAGAAGAAGAAGGTGAA+GGG 0.551224 7_2:+45028852 None:intergenic
TAATCCGAAGGCTTGTGCAT+GGG 0.552740 7_2:-45027076 Msa1059240:CDS
GATTCCAGTTGTCGAAGGAC+TGG 0.553657 7_2:+45027411 None:intergenic
TGAGGGGAAGCCTATTCCTC+CGG 0.553826 7_2:-45027676 Msa1059240:CDS
TTAATCCGAAGGCTTGTGCA+TGG 0.554256 7_2:-45027077 Msa1059240:CDS
GTCATTGCAATATCAAGCCA+TGG 0.554665 7_2:+45026162 None:intergenic
CATTCACAAAACACAAAACA+TGG 0.554683 7_2:-45028907 Msa1059240:exon
TCAACATACTTTGACCAAAG+TGG 0.559800 7_2:+45026129 None:intergenic
ATGTGATTAGACCAGGTGGT+AGG 0.561626 7_2:+45026307 None:intergenic
AATCTTCAGTTGGTTATCGA+AGG 0.562701 7_2:+45027866 None:intergenic
TGTGATTAGACCAGGTGGTA+GGG 0.564878 7_2:+45026308 None:intergenic
GATGAGTGTGAAGAAGAAGA+AGG 0.566890 7_2:+45028845 None:intergenic
TACAACATTGTCAGAGAACA+AGG 0.567266 7_2:+45027623 None:intergenic
TGTGAAGAAGAAGAAGGTGA+AGG 0.567955 7_2:+45028851 None:intergenic
AATGCCTATACGTTTAGCTA+AGG 0.568009 7_2:-45025969 Msa1059240:three_prime_UTR
GGATCCGCTCAAGCCTCGGT+TGG 0.571619 7_2:-45028159 Msa1059240:CDS
CTGAAAAGATTCCTGTATCG+AGG 0.573931 7_2:+45027993 None:intergenic
GCGGATTAAAACTACACGCC+AGG 0.575337 7_2:-45027910 Msa1059240:CDS
TGATTTGGATGCTTGGAGAA+GGG 0.576059 7_2:-45027034 Msa1059240:CDS
ATCCTAAAGCGAGGAAAACG+AGG 0.577104 7_2:+45028879 None:intergenic
TGTTGTAGCCGCCTCTGTTG+TGG 0.577299 7_2:-45027607 Msa1059240:CDS
GGTGGTTCGCCAATTGGAGA+AGG 0.584225 7_2:-45027943 Msa1059240:CDS
TGATCCAACCGAGGCTTGAG+CGG 0.585144 7_2:+45028155 None:intergenic
TTATGTATGCTTCTTACGCA+CGG 0.587445 7_2:-45028094 Msa1059240:CDS
TAGCGGATTCCAGTTGTCGA+AGG 0.589025 7_2:+45027406 None:intergenic
TTGTCTATCAATGAGGCTGA+TGG 0.589221 7_2:-45027733 Msa1059240:CDS
TGATGACATAGTAGTTCAGA+AGG 0.594090 7_2:-45027226 Msa1059240:CDS
GTAACCGACAAGATGAATCT+GGG 0.594636 7_2:-45027531 Msa1059240:CDS
CAATGAGGCTGATGGAAGAA+CGG 0.596479 7_2:-45027725 Msa1059240:CDS
CAAAGAACGCAAAGGAACCG+TGG 0.597241 7_2:-45027572 Msa1059240:CDS
GATTCAGAAGAAGTAACACT+TGG 0.598171 7_2:+45028953 None:intergenic
TTAACGAAGGCGAAGAAGCA+GGG 0.598828 7_2:-45027804 Msa1059240:CDS
ACATGCCATGATTTATCCAG+TGG 0.601802 7_2:+45026267 None:intergenic
AGAAGAAGAAGGTGAAGGGT+CGG 0.611793 7_2:+45028856 None:intergenic
CCAATTGGAGAAGGAAGTGA+AGG 0.618745 7_2:-45027934 Msa1059240:CDS
GAAGATTGATATGGATGGCA+AGG 0.619645 7_2:-45027187 Msa1059240:CDS
ATATAAAACCTCTACACATG+AGG 0.620664 7_2:-45029059 Msa1059240:five_prime_UTR
CAAGCTCGAGAATGCTACAA+AGG 0.621205 7_2:-45027358 Msa1059240:CDS
CTATGGAAGATTGATATGGA+TGG 0.627153 7_2:-45027192 Msa1059240:CDS
TACTAGGATTCTGATGATGG+TGG 0.629353 7_2:-45028233 Msa1059240:intron
TTCAAGTTGAAGGATTACAA+TGG 0.630042 7_2:-45027492 Msa1059240:CDS
ATGAGAGAGAGTAATGATGA+TGG 0.639727 7_2:+45028927 None:intergenic
AAATTAGGAACCCTACCACC+TGG 0.639754 7_2:-45026318 Msa1059240:CDS
TGGAGAAGGAAGTGAAGGAG+CGG 0.641149 7_2:-45027929 Msa1059240:CDS
TTACAATGGAGCTCACATTG+AGG 0.641182 7_2:-45027478 Msa1059240:CDS
TCAATGGTAACATGAAACCA+TGG 0.644737 7_2:-45026179 Msa1059240:CDS
TTGTTGATGATGATGGTGAG+AGG 0.645469 7_2:+45028770 None:intergenic
TCCAGAGAAGTATATCGATG+AGG 0.652113 7_2:-45027694 Msa1059240:CDS
TGAGATCAACAATGCAGCAG+TGG 0.653594 7_2:-45026208 Msa1059240:CDS
CGAGTTAACCACAACAGAGG+CGG 0.653934 7_2:+45027599 None:intergenic
TTATAACCCAAGCATCAGCA+TGG 0.655654 7_2:-45026232 Msa1059240:CDS
TTAGGATCTTCAACTTCCGG+AGG 0.659224 7_2:+45027660 None:intergenic
GCTTGCATTGTCTATCAATG+AGG 0.670067 7_2:-45027740 Msa1059240:CDS
CTCGGCAACAAAGAACGCAA+AGG 0.672137 7_2:-45027580 Msa1059240:CDS
GAGTAATATGTGATTAGACC+AGG 0.674075 7_2:+45026300 None:intergenic
TCAGATCCGTAAGCAAGCTG+AGG 0.675215 7_2:-45028135 Msa1059240:CDS
CAGAGAAGTATATCGATGAG+GGG 0.678826 7_2:-45027692 Msa1059240:CDS
TAATATGTGATTAGACCAGG+TGG 0.684716 7_2:+45026303 None:intergenic
AGTTCCTGTTGATGAATCGG+TGG 0.690425 7_2:-45027961 Msa1059240:CDS
TGCCGAGTTAACCACAACAG+AGG 0.699460 7_2:+45027596 None:intergenic
TTACGGATCTGATCCAACCG+AGG 0.699692 7_2:+45028146 None:intergenic
TGTAAATGAGCAGTTAACGA+AGG 0.714646 7_2:-45027817 Msa1059240:CDS
AAGGGTCGGATCCTAAAGCG+AGG 0.720797 7_2:+45028870 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAACAATTATGAGATT+TGG - chr7_2:45025860-45025879 Msa1059240:three_prime_UTR 15.0%
!! AAAAAATGAGAAAACAAAAA+GGG + chr7_2:45026151-45026170 None:intergenic 15.0%
!! AAAAAAATGAGAAAACAAAA+AGG + chr7_2:45026152-45026171 None:intergenic 15.0%
!!! TTTTATGATATAGTTAATCT+AGG - chr7_2:45026547-45026566 Msa1059240:intron 15.0%
!! ATTTGCATTTCTATTTAAAA+TGG + chr7_2:45028453-45028472 None:intergenic 15.0%
!! TAATGATATGAATAAATAAG+AGG + chr7_2:45028987-45029006 None:intergenic 15.0%
!!! TTTTCTCAGCAAAATAAATA+TGG - chr7_2:45026360-45026379 Msa1059240:intron 20.0%
!!! AAAATTTTGCATTTCTTTTC+TGG - chr7_2:45026383-45026402 Msa1059240:intron 20.0%
!!! AAATTTTGCATTTCTTTTCT+GGG - chr7_2:45026384-45026403 Msa1059240:intron 20.0%
!! TATAAAGATTTGATCTAGTT+AGG - chr7_2:45026411-45026430 Msa1059240:intron 20.0%
!!! AAGTTTGTTTAATATGTAAC+TGG - chr7_2:45026506-45026525 Msa1059240:intron 20.0%
!! TTCAAAATGGACAAATATTT+AGG + chr7_2:45027547-45027566 None:intergenic 20.0%
!! AATAAAACTTTATGCAACTT+AGG + chr7_2:45027601-45027620 None:intergenic 20.0%
!!! GTTGCATAAAGTTTTATTTT+TGG - chr7_2:45027603-45027622 Msa1059240:CDS 20.0%
!!! TTAAATTTAGCTTTGATCAA+CGG + chr7_2:45027760-45027779 None:intergenic 20.0%
!!! TTATTAACAATCTAAAACCT+AGG + chr7_2:45027958-45027977 None:intergenic 20.0%
!! ACATATCATGTTATAATACA+TGG + chr7_2:45028480-45028499 None:intergenic 20.0%
!!! TTGTTTTCTCATTTTTTTCC+CGG - chr7_2:45026154-45026173 Msa1059240:CDS 25.0%
!!! ATTTTTGTCCTTTTTGTTTC+TGG - chr7_2:45026218-45026237 Msa1059240:CDS 25.0%
!!! TTTTTGTCCTTTTTGTTTCT+GGG - chr7_2:45026219-45026238 Msa1059240:CDS 25.0%
!!! GTTTAATTTGAGGAAAGATT+TGG - chr7_2:45026245-45026264 Msa1059240:CDS 25.0%
! TGTTTAATATGTAACTGGAA+AGG - chr7_2:45026511-45026530 Msa1059240:intron 25.0%
! TGATATAGTTAATCTAGGAA+AGG - chr7_2:45026552-45026571 Msa1059240:intron 25.0%
! GAATCTCAAATGATTCAAAA+TGG + chr7_2:45027560-45027579 None:intergenic 25.0%
! TGGAATGAATTTCTTTGATT+TGG - chr7_2:45027804-45027823 Msa1059240:CDS 25.0%
! TAGCAAAGATATAACACTAT+AGG - chr7_2:45028134-45028153 Msa1059240:CDS 25.0%
! AGCAAAGATATAACACTATA+GGG - chr7_2:45028135-45028154 Msa1059240:CDS 25.0%
!!! GTTTTAAATCACAATCATAG+TGG + chr7_2:45028285-45028304 None:intergenic 25.0%
!! ATGATTGTGATTTAAAACCT+TGG - chr7_2:45028287-45028306 Msa1059240:intron 25.0%
!!! TCATTTTAAAATACCAACCA+AGG + chr7_2:45028307-45028326 None:intergenic 25.0%
! TTCCTAATTTCCATAATGTT+CGG + chr7_2:45028525-45028544 None:intergenic 25.0%
!!! CAATTTTGGTATCTAAACAA+TGG - chr7_2:45028774-45028793 Msa1059240:CDS 25.0%
! CCTCAAATTAAACAAGTAAT+TGG + chr7_2:45029054-45029073 None:intergenic 25.0%
!!! CCAATTACTTGTTTAATTTG+AGG - chr7_2:45029051-45029070 Msa1059240:five_prime_UTR 25.0%
!!! TTGTTTAATTTGAGGTTGTT+TGG - chr7_2:45029059-45029078 Msa1059240:five_prime_UTR 25.0%
!!! CATTTTTTCTCCATTTTCAA+TGG + chr7_2:45029090-45029109 None:intergenic 25.0%
ATATAAAACCTCTACACATG+AGG - chr7_2:45025794-45025813 Msa1059240:three_prime_UTR 30.0%
CATTCACAAAACACAAAACA+TGG - chr7_2:45025946-45025965 Msa1059240:three_prime_UTR 30.0%
!!! AGTTTTGTTGTTGATGATGA+TGG + chr7_2:45026093-45026112 None:intergenic 30.0%
TCATCATCAACAACAAAACT+TGG - chr7_2:45026093-45026112 Msa1059240:CDS 30.0%
!!! TGTTTTCTCATTTTTTTCCC+GGG - chr7_2:45026155-45026174 Msa1059240:CDS 30.0%
TAATTTGAGGAAAGATTTGG+TGG - chr7_2:45026248-45026267 Msa1059240:CDS 30.0%
! AATTTGAGGAAAGATTTGGT+GGG - chr7_2:45026249-45026268 Msa1059240:CDS 30.0%
!! TGTTGTTGTGTTTTTCAACT+AGG - chr7_2:45026439-45026458 Msa1059240:intron 30.0%
!! ATGATGTTTGGTGATTTTGT+TGG - chr7_2:45026468-45026487 Msa1059240:intron 30.0%
!! TGATGTTTGGTGATTTTGTT+GGG - chr7_2:45026469-45026488 Msa1059240:intron 30.0%
! GTTGTTATGGTTTTTGTACT+AGG - chr7_2:45026604-45026623 Msa1059240:intron 30.0%
!!! AAAACTTGTTAGGATTTTCG+CGG - chr7_2:45026802-45026821 Msa1059240:intron 30.0%
!! TTCAAGTTGAAGGATTACAA+TGG - chr7_2:45027361-45027380 Msa1059240:CDS 30.0%
TCTCAAAGTAAAATTTCTGC+AGG + chr7_2:45027474-45027493 None:intergenic 30.0%
CAAAGCTAAATTTAATCCGA+AGG - chr7_2:45027765-45027784 Msa1059240:CDS 30.0%
!! ATTTCTTTGATTTGGATGCT+TGG - chr7_2:45027812-45027831 Msa1059240:CDS 30.0%
! TAACAATCTAAAACCTAGGA+TGG + chr7_2:45027954-45027973 None:intergenic 30.0%
! TTTAAAACCTTGGTATCAAC+AGG + chr7_2:45027999-45028018 None:intergenic 30.0%
!! TTTTAAAAACAGTTGCGACT+TGG - chr7_2:45028012-45028031 Msa1059240:CDS 30.0%
TTTAAAAACAGTTGCGACTT+GGG - chr7_2:45028013-45028032 Msa1059240:CDS 30.0%
ATAAAACTGCTATCCATTTG+CGG - chr7_2:45028080-45028099 Msa1059240:CDS 30.0%
TACTAAGTGTAGTCAAATAG+CGG - chr7_2:45028108-45028127 Msa1059240:CDS 30.0%
GTAACAAAATACCGATAATG+TGG + chr7_2:45028256-45028275 None:intergenic 30.0%
! TTGTGATTTAAAACCTTGGT+TGG - chr7_2:45028291-45028310 Msa1059240:intron 30.0%
AACCGAACATTATGGAAATT+AGG - chr7_2:45028520-45028539 Msa1059240:intron 30.0%
! GATAAATCATGGCATGTTTT+GGG - chr7_2:45028592-45028611 Msa1059240:intron 30.0%
TGTTTAGATACCAAAATTGC+AGG + chr7_2:45028773-45028792 None:intergenic 30.0%
TTTGGATTCTCCATTGAAAA+TGG - chr7_2:45029077-45029096 Msa1059240:five_prime_UTR 30.0%
GATTCAGAAGAAGTAACACT+TGG + chr7_2:45025903-45025922 None:intergenic 35.0%
ATGAGAGAGAGTAATGATGA+TGG + chr7_2:45025929-45025948 None:intergenic 35.0%
!!! TCATTTTTTTCCCGGGAAAT+TGG - chr7_2:45026162-45026181 Msa1059240:CDS 35.0%
!!! CATTTTTTTCCCGGGAAATT+GGG - chr7_2:45026163-45026182 Msa1059240:CDS 35.0%
AAACCAACCCAGAAACAAAA+AGG + chr7_2:45026229-45026248 None:intergenic 35.0%
!! TTCTGGGTTGGTTTAATTTG+AGG - chr7_2:45026235-45026254 Msa1059240:CDS 35.0%
!! ATTTGAGGAAAGATTTGGTG+GGG - chr7_2:45026250-45026269 Msa1059240:CDS 35.0%
!!! AGTTTTGGATCTTACTGTCT+AGG - chr7_2:45026280-45026299 Msa1059240:CDS 35.0%
TCTTACTGTCTAGGTTCAAA+TGG - chr7_2:45026289-45026308 Msa1059240:CDS 35.0%
CTTACTGTCTAGGTTCAAAT+GGG - chr7_2:45026290-45026309 Msa1059240:CDS 35.0%
!! ATTCTCTCTGGAACCATTTA+GGG - chr7_2:45026322-45026341 Msa1059240:CDS 35.0%
!! TGTGTTTTTCAACTAGGACT+AGG - chr7_2:45026445-45026464 Msa1059240:intron 35.0%
GCTATGTTGATCTGTTGTTA+TGG - chr7_2:45026591-45026610 Msa1059240:intron 35.0%
TTGTACTAGGATTCTGATGA+TGG - chr7_2:45026617-45026636 Msa1059240:intron 35.0%
!!! ATCTGTTTTGGCACTGAAAA+CGG - chr7_2:45026673-45026692 Msa1059240:intron 35.0%
TTATGTATGCTTCTTACGCA+CGG - chr7_2:45026759-45026778 Msa1059240:intron 35.0%
! TTGAGAGCTCAAAACTTGTT+AGG - chr7_2:45026792-45026811 Msa1059240:intron 35.0%
AATCTTCAGTTGGTTATCGA+AGG + chr7_2:45026990-45027009 None:intergenic 35.0%
TCAACTTCTGAATCTTCAGT+TGG + chr7_2:45027000-45027019 None:intergenic 35.0%
ACTGAAGATTCAGAAGTTGA+AGG - chr7_2:45027000-45027019 Msa1059240:CDS 35.0%
TGTAAATGAGCAGTTAACGA+AGG - chr7_2:45027036-45027055 Msa1059240:CDS 35.0%
AGATTAGGATCTTCAACTTC+CGG + chr7_2:45027199-45027218 None:intergenic 35.0%
AAGGCGTAGTGATATAGATT+AGG + chr7_2:45027214-45027233 None:intergenic 35.0%
TACAACATTGTCAGAGAACA+AGG + chr7_2:45027233-45027252 None:intergenic 35.0%
GTAAAATTTCTGCAGGTTAG+CGG + chr7_2:45027467-45027486 None:intergenic 35.0%
ACACAACGAATATGAAGTTC+AGG - chr7_2:45027518-45027537 Msa1059240:CDS 35.0%
TGCAACTTAGGATACATTTC+TGG + chr7_2:45027589-45027608 None:intergenic 35.0%
TGATGACATAGTAGTTCAGA+AGG - chr7_2:45027627-45027646 Msa1059240:CDS 35.0%
TGGACTATGGAAGATTGATA+TGG - chr7_2:45027657-45027676 Msa1059240:CDS 35.0%
CTATGGAAGATTGATATGGA+TGG - chr7_2:45027661-45027680 Msa1059240:CDS 35.0%
! GAGCTGTAGAAACATGTTTT+GGG - chr7_2:45027695-45027714 Msa1059240:CDS 35.0%
TCATGTACTGTGCATATCTA+TGG + chr7_2:45027726-45027745 None:intergenic 35.0%
GCATTAGTAAATACCATCCT+AGG - chr7_2:45027938-45027957 Msa1059240:CDS 35.0%
CAACAGGAAACAGAGTTAAA+TGG + chr7_2:45027983-45028002 None:intergenic 35.0%
!!! CGCAACTGTTTTTAAAACCT+TGG + chr7_2:45028009-45028028 None:intergenic 35.0%
TTAAAAACAGTTGCGACTTG+GGG - chr7_2:45028014-45028033 Msa1059240:CDS 35.0%
ACTTAGTACTTAACCGCAAA+TGG + chr7_2:45028096-45028115 None:intergenic 35.0%
GATATAACACTATAGGGTAG+CGG - chr7_2:45028141-45028160 Msa1059240:CDS 35.0%
! TCTTTTTGCAGCCACATTAT+CGG - chr7_2:45028242-45028261 Msa1059240:intron 35.0%
GAATAAGACTATAGCGTACA+TGG + chr7_2:45028406-45028425 None:intergenic 35.0%
AGAATGAGAACCGAACATTA+TGG - chr7_2:45028512-45028531 Msa1059240:intron 35.0%
TAATATGTGATTAGACCAGG+TGG + chr7_2:45028553-45028572 None:intergenic 35.0%
GAGTAATATGTGATTAGACC+AGG + chr7_2:45028556-45028575 None:intergenic 35.0%
! GGATAAATCATGGCATGTTT+TGG - chr7_2:45028591-45028610 Msa1059240:intron 35.0%
TCAATGGTAACATGAAACCA+TGG - chr7_2:45028674-45028693 Msa1059240:intron 35.0%
TCAACATACTTTGACCAAAG+TGG + chr7_2:45028727-45028746 None:intergenic 35.0%
! TGTCGAATTAGAGTTTGTTC+AGG - chr7_2:45028747-45028766 Msa1059240:intron 35.0%
AAGTTTCTTCTCTTCTCACT+TGG - chr7_2:45028799-45028818 Msa1059240:CDS 35.0%
!! TGCTTGCAGCAGTTATTTTA+TGG - chr7_2:45028843-45028862 Msa1059240:CDS 35.0%
AATGCCTATACGTTTAGCTA+AGG - chr7_2:45028884-45028903 Msa1059240:CDS 35.0%
AGAACCTTAGCTAAACGTAT+AGG + chr7_2:45028891-45028910 None:intergenic 35.0%
! GTCTTTTTCCTCATGTGTAG+AGG + chr7_2:45025805-45025824 None:intergenic 40.0%
GTGAAGAAGAAGAAGGTGAA+GGG + chr7_2:45026004-45026023 None:intergenic 40.0%
TGTGAAGAAGAAGAAGGTGA+AGG + chr7_2:45026005-45026024 None:intergenic 40.0%
GATGAGTGTGAAGAAGAAGA+AGG + chr7_2:45026011-45026030 None:intergenic 40.0%
!! TTGTTGATGATGATGGTGAG+AGG + chr7_2:45026086-45026105 None:intergenic 40.0%
AAATCACAACCCAATTTCCC+GGG + chr7_2:45026175-45026194 None:intergenic 40.0%
GAAATCACAACCCAATTTCC+CGG + chr7_2:45026176-45026195 None:intergenic 40.0%
!!! TGTCCTTTTTGTTTCTGGGT+TGG - chr7_2:45026223-45026242 Msa1059240:CDS 40.0%
!! GATTCTCTCTGGAACCATTT+AGG - chr7_2:45026321-45026340 Msa1059240:CDS 40.0%
TACACGCATCAAACCCTAAA+TGG + chr7_2:45026338-45026357 None:intergenic 40.0%
ACTAGGACTAGGATGATGTT+TGG - chr7_2:45026456-45026475 Msa1059240:intron 40.0%
!! TACTAGGATTCTGATGATGG+TGG - chr7_2:45026620-45026639 Msa1059240:intron 40.0%
! CTCGATAAGGAGATCTGTTT+TGG - chr7_2:45026661-45026680 Msa1059240:intron 40.0%
! TATGATCCTCAGCTTGCTTA+CGG + chr7_2:45026727-45026746 None:intergenic 40.0%
AGCTGAGGATCATAAGTCTT+TGG - chr7_2:45026733-45026752 Msa1059240:intron 40.0%
! GGAACTATCACGGAACTTTT+CGG - chr7_2:45026823-45026842 Msa1059240:intron 40.0%
CTGAAAAGATTCCTGTATCG+AGG + chr7_2:45026863-45026882 None:intergenic 40.0%
! TGCAGTTCCTGTTGATGAAT+CGG - chr7_2:45026889-45026908 Msa1059240:intron 40.0%
TTGGTTATCGAAGGACTCTT+TGG + chr7_2:45026981-45027000 None:intergenic 40.0%
GATAGACAATGCAAGCTCTT+CGG + chr7_2:45027109-45027128 None:intergenic 40.0%
GCTTGCATTGTCTATCAATG+AGG - chr7_2:45027113-45027132 Msa1059240:CDS 40.0%
TTGTCTATCAATGAGGCTGA+TGG - chr7_2:45027120-45027139 Msa1059240:CDS 40.0%
! TCCAGAGAAGTATATCGATG+AGG - chr7_2:45027159-45027178 Msa1059240:CDS 40.0%
! CCAGAGAAGTATATCGATGA+GGG - chr7_2:45027160-45027179 Msa1059240:CDS 40.0%
! CAGAGAAGTATATCGATGAG+GGG - chr7_2:45027161-45027180 Msa1059240:CDS 40.0%
TGTAACCGACAAGATGAATC+TGG - chr7_2:45027321-45027340 Msa1059240:CDS 40.0%
GTAACCGACAAGATGAATCT+GGG - chr7_2:45027322-45027341 Msa1059240:CDS 40.0%
!! GCAAGTGATGTTCAAGTTGA+AGG - chr7_2:45027351-45027370 Msa1059240:CDS 40.0%
TTACAATGGAGCTCACATTG+AGG - chr7_2:45027375-45027394 Msa1059240:CDS 40.0%
CTGGCACATAAGAAGAATTC+AGG + chr7_2:45027426-45027445 None:intergenic 40.0%
CAATCTTCCATAGTCCAGTA+AGG + chr7_2:45027654-45027673 None:intergenic 40.0%
GAAGATTGATATGGATGGCA+AGG - chr7_2:45027666-45027685 Msa1059240:CDS 40.0%
! GGAGCTGTAGAAACATGTTT+TGG - chr7_2:45027694-45027713 Msa1059240:CDS 40.0%
!! TTGATTTGGATGCTTGGAGA+AGG - chr7_2:45027818-45027837 Msa1059240:CDS 40.0%
! TGATTTGGATGCTTGGAGAA+GGG - chr7_2:45027819-45027838 Msa1059240:CDS 40.0%
!! GCACAGAAGAGTATCATTAC+TGG - chr7_2:45027848-45027867 Msa1059240:CDS 40.0%
GTATCATTACTGGCAGAATC+TGG - chr7_2:45027858-45027877 Msa1059240:CDS 40.0%
TCTGTTTCCTGTTGATACCA+AGG - chr7_2:45027989-45028008 Msa1059240:CDS 40.0%
CTGGAACAAATGCTAGTGAT+GGG + chr7_2:45028346-45028365 None:intergenic 40.0%
! TCTGGAACAAATGCTAGTGA+TGG + chr7_2:45028347-45028366 None:intergenic 40.0%
ACATGCCATGATTTATCCAG+TGG + chr7_2:45028589-45028608 None:intergenic 40.0%
TTATAACCCAAGCATCAGCA+TGG - chr7_2:45028621-45028640 Msa1059240:intron 40.0%
GTCATTGCAATATCAAGCCA+TGG + chr7_2:45028694-45028713 None:intergenic 40.0%
TGACTCAATTCAAGCCACTT+TGG - chr7_2:45028710-45028729 Msa1059240:intron 40.0%
! TTTGTTCAGGCCTGCAATTT+TGG - chr7_2:45028760-45028779 Msa1059240:intron 40.0%
! ATCCTCGTTTTCCTCGCTTT+AGG - chr7_2:45025972-45025991 Msa1059240:three_prime_UTR 45.0%
ATCCTAAAGCGAGGAAAACG+AGG + chr7_2:45025977-45025996 None:intergenic 45.0%
AGAAGAAGAAGGTGAAGGGT+CGG + chr7_2:45026000-45026019 None:intergenic 45.0%
CTGTCTAGGTTCAAATGGGT+CGG - chr7_2:45026294-45026313 Msa1059240:CDS 45.0%
! CTCATGGATTCGACTCGATA+AGG - chr7_2:45026648-45026667 Msa1059240:intron 45.0%
! GGATTTTCGCGGAACTATCA+CGG - chr7_2:45026813-45026832 Msa1059240:intron 45.0%
TGATGAGCAAACCTCGATAC+AGG - chr7_2:45026849-45026868 Msa1059240:intron 45.0%
! AGTTCCTGTTGATGAATCGG+TGG - chr7_2:45026892-45026911 Msa1059240:intron 45.0%
CCTTCACTTCCTTCTCCAAT+TGG + chr7_2:45026922-45026941 None:intergenic 45.0%
CCAATTGGAGAAGGAAGTGA+AGG - chr7_2:45026919-45026938 Msa1059240:intron 45.0%
AAAACTACACGCCAGGTGAT+TGG - chr7_2:45026950-45026969 Msa1059240:intron 45.0%
TTAACGAAGGCGAAGAAGCA+GGG - chr7_2:45027049-45027068 Msa1059240:CDS 45.0%
CAATGAGGCTGATGGAAGAA+CGG - chr7_2:45027128-45027147 Msa1059240:CDS 45.0%
CCCTCATCGATATACTTCTC+TGG + chr7_2:45027163-45027182 None:intergenic 45.0%
TCTTCAACTTCCGGAGGAAT+AGG + chr7_2:45027190-45027209 None:intergenic 45.0%
TTAGGATCTTCAACTTCCGG+AGG + chr7_2:45027196-45027215 None:intergenic 45.0%
ACATGAAACACGTGCTTCCA+CGG + chr7_2:45027301-45027320 None:intergenic 45.0%
AGCTCCCAGATTCATCTTGT+CGG + chr7_2:45027329-45027348 None:intergenic 45.0%
TGGAGCTCACATTGAGGTTA+AGG - chr7_2:45027381-45027400 Msa1059240:CDS 45.0%
CAAGCTCGAGAATGCTACAA+AGG - chr7_2:45027495-45027514 Msa1059240:CDS 45.0%
GTAGTTCAGAAGGACCTTAC+TGG - chr7_2:45027637-45027656 Msa1059240:CDS 45.0%
AGAAGGACCTTACTGGACTA+TGG - chr7_2:45027644-45027663 Msa1059240:CDS 45.0%
GATATGGATGGCAAGGTGAA+TGG - chr7_2:45027673-45027692 Msa1059240:CDS 45.0%
TTAATCCGAAGGCTTGTGCA+TGG - chr7_2:45027776-45027795 Msa1059240:CDS 45.0%
TAATCCGAAGGCTTGTGCAT+GGG - chr7_2:45027777-45027796 Msa1059240:CDS 45.0%
ACGCTGATGTGACTACTATG+TGG - chr7_2:45028205-45028224 Msa1059240:CDS 45.0%
GAATTTCAAGATGCAGCGTC+TGG + chr7_2:45028365-45028384 None:intergenic 45.0%
AAATTAGGAACCCTACCACC+TGG - chr7_2:45028535-45028554 Msa1059240:intron 45.0%
TGTGATTAGACCAGGTGGTA+GGG + chr7_2:45028548-45028567 None:intergenic 45.0%
ATGTGATTAGACCAGGTGGT+AGG + chr7_2:45028549-45028568 None:intergenic 45.0%
TTACTCAACAACGAAGCCAC+TGG - chr7_2:45028570-45028589 Msa1059240:intron 45.0%
CGAAGCCACTGGATAAATCA+TGG - chr7_2:45028581-45028600 Msa1059240:intron 45.0%
!!! TCATGGCATGTTTTGGGACT+TGG - chr7_2:45028598-45028617 Msa1059240:intron 45.0%
TCTCATCCATGCTGATGCTT+GGG + chr7_2:45028630-45028649 None:intergenic 45.0%
ATCTCATCCATGCTGATGCT+TGG + chr7_2:45028631-45028650 None:intergenic 45.0%
TGAGATCAACAATGCAGCAG+TGG - chr7_2:45028645-45028664 Msa1059240:intron 45.0%
!! TGAGGAAAGATTTGGTGGGG+TGG - chr7_2:45026253-45026272 Msa1059240:CDS 50.0%
!! TGGTGGGGTGGTGTTAGTTT+TGG - chr7_2:45026265-45026284 Msa1059240:CDS 50.0%
!! GATGATGGTGGTGTTGCTCA+TGG - chr7_2:45026632-45026651 Msa1059240:intron 50.0%
TTACGGATCTGATCCAACCG+AGG + chr7_2:45026710-45026729 None:intergenic 50.0%
TCAGATCCGTAAGCAAGCTG+AGG - chr7_2:45026718-45026737 Msa1059240:intron 50.0%
!! CGAACCACCGATTCATCAAC+AGG + chr7_2:45026899-45026918 None:intergenic 50.0%
TGAATCGGTGGTTCGCCAAT+TGG - chr7_2:45026904-45026923 Msa1059240:intron 50.0%
TGGAGAAGGAAGTGAAGGAG+CGG - chr7_2:45026924-45026943 Msa1059240:intron 50.0%
! GCGGATTAAAACTACACGCC+AGG - chr7_2:45026943-45026962 Msa1059240:intron 50.0%
! CTTTGGCTTCACCAATCACC+TGG + chr7_2:45026964-45026983 None:intergenic 50.0%
GTTAACGAAGGCGAAGAAGC+AGG - chr7_2:45027048-45027067 Msa1059240:CDS 50.0%
CGAGTTAACCACAACAGAGG+CGG + chr7_2:45027257-45027276 None:intergenic 50.0%
CGCCTCTGTTGTGGTTAACT+CGG - chr7_2:45027255-45027274 Msa1059240:CDS 50.0%
TGCCGAGTTAACCACAACAG+AGG + chr7_2:45027260-45027279 None:intergenic 50.0%
CTCGGCAACAAAGAACGCAA+AGG - chr7_2:45027273-45027292 Msa1059240:CDS 50.0%
CAAAGAACGCAAAGGAACCG+TGG - chr7_2:45027281-45027300 Msa1059240:CDS 50.0%
GATTCCAGTTGTCGAAGGAC+TGG + chr7_2:45027445-45027464 None:intergenic 50.0%
!! TAGCGGATTCCAGTTGTCGA+AGG + chr7_2:45027450-45027469 None:intergenic 50.0%
TAAGCCCATGCACAAGCCTT+CGG + chr7_2:45027784-45027803 None:intergenic 50.0%
AAGGCTTGTGCATGGGCTTA+TGG - chr7_2:45027784-45027803 Msa1059240:CDS 50.0%
GCAGCAGTGGTGCATTTCAA+TGG - chr7_2:45028658-45028677 Msa1059240:intron 50.0%
AAGGGTCGGATCCTAAAGCG+AGG + chr7_2:45025986-45026005 None:intergenic 55.0%
GGGTCGGATCTGATTCTCTC+TGG - chr7_2:45026310-45026329 Msa1059240:CDS 55.0%
AAACGGATCCGCTCAAGCCT+CGG - chr7_2:45026690-45026709 Msa1059240:intron 55.0%
TGATCCAACCGAGGCTTGAG+CGG + chr7_2:45026701-45026720 None:intergenic 55.0%
GGTGGTTCGCCAATTGGAGA+AGG - chr7_2:45026910-45026929 Msa1059240:intron 55.0%
TGAGGGGAAGCCTATTCCTC+CGG - chr7_2:45027177-45027196 Msa1059240:CDS 55.0%
TGTTGTAGCCGCCTCTGTTG+TGG - chr7_2:45027246-45027265 Msa1059240:CDS 55.0%
TGTGCCAGTCCTTCGACAAC+TGG - chr7_2:45027438-45027457 Msa1059240:CDS 55.0%
GCGTTGTCGATCATGCATCG+TGG + chr7_2:45028189-45028208 None:intergenic 55.0%
GGATCCGCTCAAGCCTCGGT+TGG - chr7_2:45026694-45026713 Msa1059240:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 45025745 45029130 45025745 ID=Msa1059240;Name=Msa1059240
chr7_2 mRNA 45025745 45029130 45025745 ID=Msa1059240-mRNA-1;Parent=Msa1059240;Name=Msa1059240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=220|1|1|1|1|1|3|341|559
chr7_2 exon 45025745 45026361 45025745 ID=Msa1059240-mRNA-1:exon:8192;Parent=Msa1059240-mRNA-1
chr7_2 exon 45026996 45028249 45026996 ID=Msa1059240-mRNA-1:exon:8191;Parent=Msa1059240-mRNA-1
chr7_2 exon 45028761 45029130 45028761 ID=Msa1059240-mRNA-1:exon:8190;Parent=Msa1059240-mRNA-1
chr7_2 five_prime_UTR 45028911 45029130 45028911 ID=Msa1059240-mRNA-1:five_prime_utr;Parent=Msa1059240-mRNA-1
chr7_2 CDS 45028761 45028910 45028761 ID=Msa1059240-mRNA-1:cds;Parent=Msa1059240-mRNA-1
chr7_2 CDS 45026996 45028249 45026996 ID=Msa1059240-mRNA-1:cds;Parent=Msa1059240-mRNA-1
chr7_2 CDS 45026086 45026361 45026086 ID=Msa1059240-mRNA-1:cds;Parent=Msa1059240-mRNA-1
chr7_2 three_prime_UTR 45025745 45026085 45025745 ID=Msa1059240-mRNA-1:three_prime_utr;Parent=Msa1059240-mRNA-1
Gene Sequence

>Msa1059240

ATGGTTAATCCTCGTTTTCCTCGCTTTAGGATCCGACCCTTCACCTTCTTCTTCTTCACACTCATCGCTCTCTGCATTTTCTTCACTGTCTCTTTTCTCTTCACTGTCAATTCATATTCCTCTCACCATCATCATCAACAACAAAACTTGGATTCTGATGATGGTGGTGTTGCTCATGGATTCGACTCGATAAGGAGATCTGTTTTGGCACTGAAAACGGATCCGCTCAAGCCTCGGTTGGATCAGATCCGTAAGCAAGCTGAGGATCATAAGTCTTTGGCTCTTATGTATGCTTCTTACGCACGGAAGCTCAAGCTTGAGAGCTCAAAACTTGTTAGGATTTTCGCGGAACTATCACGGAACTTTTCGGATTTGATGAGCAAACCTCGATACAGGAATCTTTTCAGCAATGATGCAGTTCCTGTTGATGAATCGGTGGTTCGCCAATTGGAGAAGGAAGTGAAGGAGCGGATTAAAACTACACGCCAGGTGATTGGTGAAGCCAAAGAGTCCTTCGATAACCAACTGAAGATTCAGAAGTTGAAGGATACTATTTTTGCTGTAAATGAGCAGTTAACGAAGGCGAAGAAGCAGGGTGCTTTCTCAAGCTTGATTGCTGCTAAGTCAATTCCGAAGAGCTTGCATTGTCTATCAATGAGGCTGATGGAAGAACGGATTGCTCATCCAGAGAAGTATATCGATGAGGGGAAGCCTATTCCTCCGGAAGTTGAAGATCCTAATCTATATCACTACGCCTTGTTCTCTGACAATGTTGTAGCCGCCTCTGTTGTGGTTAACTCGGCAACAAAGAACGCAAAGGAACCGTGGAAGCACGTGTTTCATGTTGTAACCGACAAGATGAATCTGGGAGCTATGCAAGTGATGTTCAAGTTGAAGGATTACAATGGAGCTCACATTGAGGTTAAGGCAGTTGAAGATTACAAATTCCTGAATTCTTCTTATGTGCCAGTCCTTCGACAACTGGAATCCGCTAACCTGCAGAAATTTTACTTTGAGAACAAGCTCGAGAATGCTACAAAGGACACAACGAATATGAAGTTCAGGAATCCTAAATATTTGTCCATTTTGAATCATTTGAGATTCTACTTGCCAGAAATGTATCCTAAGTTGCATAAAGTTTTATTTTTGGATGATGACATAGTAGTTCAGAAGGACCTTACTGGACTATGGAAGATTGATATGGATGGCAAGGTGAATGGAGCTGTAGAAACATGTTTTGGGTCATTCCATAGATATGCACAGTACATGAATTTTTCGCATCCGTTGATCAAAGCTAAATTTAATCCGAAGGCTTGTGCATGGGCTTATGGAATGAATTTCTTTGATTTGGATGCTTGGAGAAGGGTAAAATGCACAGAAGAGTATCATTACTGGCAGAATCTGAATGAGAACCGAACATTATGGAAATTAGGAACCCTACCACCTGGTCTAATCACATATTACTCAACAACGAAGCCACTGGATAAATCATGGCATGTTTTGGGACTTGGTTATAACCCAAGCATCAGCATGGATGAGATCAACAATGCAGCAGTGGTGCATTTCAATGGTAACATGAAACCATGGCTTGATATTGCAATGACTCAATTCAAGCCACTTTGGTCAAAGTATGTTGATGTCGAATTAGAGTTTGTTCAGGCCTGCAATTTTGGTATCTAA
Protein sequence

>Msa1059240

MVNPRFPRFRIRPFTFFFFTLIALCIFFTVSFLFTVNSYSSHHHHQQQNLDSDDGGVAHGFDSIRRSVLALKTDPLKPRLDQIRKQAEDHKSLALMYASYARKLKLESSKLVRIFAELSRNFSDLMSKPRYRNLFSNDAVPVDESVVRQLEKEVKERIKTTRQVIGEAKESFDNQLKIQKLKDTIFAVNEQLTKAKKQGAFSSLIAAKSIPKSLHCLSMRLMEERIAHPEKYIDEGKPIPPEVEDPNLYHYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVKAVEDYKFLNSSYVPVLRQLESANLQKFYFENKLENATKDTTNMKFRNPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKAKFNPKACAWAYGMNFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACNFGI*