AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1154490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154490 MtrunA17_Chr7g0245501 89.087 504 6 2 1 504 34 488 0.0 882
Msa1154490 MtrunA17_Chr3g0128451 73.375 477 88 3 36 504 39 484 0.0 702
Msa1154490 MtrunA17_Chr5g0428701 70.120 502 105 5 12 504 23 488 0.0 701
Msa1154490 MtrunA17_Chr4g0057181 65.636 291 76 8 201 484 34 307 3.89e-115 343
Msa1154490 MtrunA17_Chr4g0057191 60.900 289 72 6 17 303 5 254 4.62e-103 309
Msa1154490 MtrunA17_Chr4g0057201 63.918 194 50 5 317 504 5 184 3.80e-72 227
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154490 AT3G54190.1 74.141 495 87 5 10 504 14 467 0.0 736
Msa1154490 AT2G38630.1 70.727 509 101 6 1 504 2 467 0.0 716
Msa1154490 AT2G38630.2 70.396 429 82 5 1 424 2 390 0.0 604
Msa1154490 AT2G38630.3 59.424 382 94 6 1 377 2 327 2.91e-149 430

Find 129 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGAATGTGTTATTCATTT+TGG 0.156832 7_4:-41926855 Msa1154490:three_prime_UTR
GTCTTTGCTCTTGCTCATTC+TGG 0.167401 7_4:-41933180 Msa1154490:CDS
TACTTCATCCTGGAATTCTT+AGG 0.213197 7_4:-41926962 Msa1154490:three_prime_UTR
GTGTTTCTTCACTGGCTTCA+TGG 0.222692 7_4:-41927358 Msa1154490:three_prime_UTR
AAGAGAGAGAGATGAAAATT+TGG 0.247405 7_4:-41933538 Msa1154490:five_prime_UTR
GAGCTCAGTTGCAGAGGCTT+TGG 0.291056 7_4:-41927489 Msa1154490:CDS
TCCAGTCCGAGTCTTTAAAA+TGG 0.300906 7_4:-41931507 Msa1154490:CDS
GAAGGAGAAGAATGATGTTT+AGG 0.312064 7_4:+41933267 None:intergenic
ACCCGGTCCTGAGGCAGTTT+CGG 0.329786 7_4:+41927260 None:intergenic
ACAAAGGAACGATGAGGTTT+AGG 0.331680 7_4:+41933354 None:intergenic
AACTGCCTCAGGACCGGGTC+TGG 0.332837 7_4:-41927256 Msa1154490:three_prime_UTR
AAACTGATTCATCTCAAATA+AGG 0.341577 7_4:-41927511 Msa1154490:CDS
CTCATCTGACACAAAATATA+TGG 0.361839 7_4:+41927001 None:intergenic
TGTTTCTTTCACTGTTATAT+AGG 0.363793 7_4:-41927073 Msa1154490:three_prime_UTR
GTTGATCTTGATGTTTGGTT+TGG 0.365284 7_4:+41933419 None:intergenic
ACTTCATCCTGGAATTCTTA+GGG 0.365451 7_4:-41926961 Msa1154490:three_prime_UTR
GATGAGTCAAACGCATGTTC+TGG 0.366251 7_4:+41933307 None:intergenic
TGAACAAATCACTCTATAAC+TGG 0.375831 7_4:+41927115 None:intergenic
ATGTTGTTTGTGTTGCAGTC+TGG 0.379991 7_4:+41927859 None:intergenic
TTTAAAATGGCCTGGATTTG+TGG 0.382135 7_4:-41931494 Msa1154490:CDS
AAGAAAGAAGGCGTGGAGTT+TGG 0.382380 7_4:-41933491 Msa1154490:CDS
TATCTTGCGCAGAGTATGTT+AGG 0.404150 7_4:+41931446 None:intergenic
CAAAGTCCCCTAAGAATTCC+AGG 0.405017 7_4:+41926954 None:intergenic
CTTTGCAGTACGAGATAATC+AGG 0.409167 7_4:+41927815 None:intergenic
TTGTTGTTGATCTTGATGTT+TGG 0.410000 7_4:+41933414 None:intergenic
CATTTGAGGATCACCTGTTA+TGG 0.410562 7_4:-41927885 Msa1154490:CDS
AAATGGCTGTGTTTCTTCAC+TGG 0.414654 7_4:-41927366 Msa1154490:three_prime_UTR
GGCGTGGAGTTTGGTCTTGT+CGG 0.418834 7_4:-41933482 Msa1154490:CDS
ATTGTTTGAGGATTCACCTT+TGG 0.419921 7_4:+41933446 None:intergenic
CTGTTCGATTTCTGAAAGTA+AGG 0.421649 7_4:+41927944 None:intergenic
GAACAATGACTCACTTATTA+CGG 0.424297 7_4:-41931716 Msa1154490:CDS
AGGCTGCGGATGACTTCGTC+AGG 0.431696 7_4:+41931751 None:intergenic
AGTTATAGAGTGATTTGTTC+AGG 0.431739 7_4:-41927113 Msa1154490:three_prime_UTR
GGAATTCTTAGGGGACTTTG+TGG 0.432784 7_4:-41926951 Msa1154490:three_prime_UTR
GGATATTGACTCAGGATTGT+AGG 0.436177 7_4:-41927177 Msa1154490:three_prime_UTR
GGGGACTTTGTGGGATATGA+TGG 0.441632 7_4:-41926941 Msa1154490:three_prime_UTR
TCCGAGTCTTTAAAATGGCC+TGG 0.444309 7_4:-41931502 Msa1154490:CDS
GAAATCGAACAGTTTCTGTC+TGG 0.445200 7_4:-41927933 Msa1154490:CDS
TTGGCCCTCTTTATGTATCT+AGG 0.445752 7_4:+41931553 None:intergenic
CTCAGTTGCAGAGGCTTTGG+AGG 0.453116 7_4:-41927486 Msa1154490:CDS
TAGACATGTTCTTGTGGTGT+TGG 0.460985 7_4:-41926825 Msa1154490:three_prime_UTR
ATTCTATTATTACTTCATCC+TGG 0.461319 7_4:-41926972 Msa1154490:three_prime_UTR
CGAACTTGTCACATCATTTG+AGG 0.461967 7_4:-41927899 Msa1154490:CDS
ACTGAAGATTATATCGATTG+AGG 0.466531 7_4:-41928982 Msa1154490:CDS
AGAGAGACATAGAGGGTGGA+AGG 0.467337 7_4:+41927226 None:intergenic
TGCAGTCTGGATGCCATAAC+AGG 0.471293 7_4:+41927872 None:intergenic
GTTTCTGTCTGGAACTTTCG+TGG 0.473572 7_4:-41927922 Msa1154490:CDS
TGCCGAAACTGCCTCAGGAC+CGG 0.479034 7_4:-41927262 Msa1154490:three_prime_UTR
TGGCAAGAGGGGAAACTACA+TGG 0.481366 7_4:-41926921 Msa1154490:three_prime_UTR
GACATGGTTATGTTCATGTA+TGG 0.483453 7_4:-41927409 Msa1154490:CDS
GGACTGGAAAAGAGGAAAAC+CGG 0.484667 7_4:+41931522 None:intergenic
AGGAAAACCGGCATCCGGCT+TGG 0.486352 7_4:+41931534 None:intergenic
CTTTGAAGTGCAGATCTACA+AGG 0.487895 7_4:-41931663 Msa1154490:CDS
AGAGAGAGAGACATAGAGGG+TGG 0.490364 7_4:+41927222 None:intergenic
CATTGTTCTTGTTGTAGAAG+AGG 0.492253 7_4:+41931731 None:intergenic
TGGTTTGGAACCATTGTTTG+AGG 0.492594 7_4:+41933434 None:intergenic
TGCTATACTCGATTTCAGAT+AGG 0.493550 7_4:-41931291 Msa1154490:CDS
GACCGGAACGAGATCTATAC+TGG 0.496353 7_4:-41927437 Msa1154490:CDS
CATATACATAACAAGTGATC+AGG 0.497931 7_4:-41927839 Msa1154490:CDS
AATGTGAGCAACATCTTGAC+GGG 0.498400 7_4:-41927611 Msa1154490:CDS
TAACATACTCTGCGCAAGAT+AGG 0.498523 7_4:-41931444 Msa1154490:intron
GTCTCACATCAAGAATTTGA+AGG 0.498932 7_4:+41928853 None:intergenic
TACCAGTATAGATCTCGTTC+CGG 0.501006 7_4:+41927435 None:intergenic
AGATGAAAATTTGGTGGTGG+TGG 0.501158 7_4:-41933529 Msa1154490:five_prime_UTR
AAAGGTGAATCCTCAAACAA+TGG 0.503479 7_4:-41933444 Msa1154490:CDS
TGAAAAGCTTCTAGTCAAGC+AGG 0.507271 7_4:-41928886 Msa1154490:CDS
TGAAGAGAATGGAAGAAAGA+AGG 0.508151 7_4:-41933503 Msa1154490:exon
CAATGTGAGCAACATCTTGA+CGG 0.508331 7_4:-41927612 Msa1154490:CDS
GTTGCTCACATTGATAGAAC+CGG 0.511096 7_4:+41927622 None:intergenic
AAAGACTCGGACTGGAAAAG+AGG 0.513157 7_4:+41931514 None:intergenic
AAAAGAGGAAAACCGGCATC+CGG 0.515148 7_4:+41931529 None:intergenic
GACATAGAGGGTGGAAGGAG+AGG 0.516288 7_4:+41927231 None:intergenic
TCCGGTCTTCATCATAAAAG+AGG 0.516507 7_4:+41927453 None:intergenic
GAATTCTTAGGGGACTTTGT+GGG 0.518330 7_4:-41926950 Msa1154490:three_prime_UTR
TCATCAAATTCCACAAATCC+AGG 0.520277 7_4:+41931484 None:intergenic
AGAGAGAGATGAAAATTTGG+TGG 0.520376 7_4:-41933535 Msa1154490:five_prime_UTR
AGTCCACTTTCTTATTCCGA+TGG 0.523907 7_4:+41928925 None:intergenic
TTGTTCCTAGATACATAAAG+AGG 0.524376 7_4:-41931558 Msa1154490:CDS
AAGAGGGCCAAGCCGGATGC+CGG 0.527295 7_4:-41931541 Msa1154490:CDS
AAGCTGAATCTGAAGATCAA+TGG 0.527928 7_4:-41927795 Msa1154490:CDS
GGTTCGAAGTTCTGAGCTGA+TGG 0.530500 7_4:-41928031 Msa1154490:CDS
GAAAGAGTGGATATTGACTC+AGG 0.531225 7_4:-41927185 Msa1154490:three_prime_UTR
TCAATCAATGATACAAATGA+AGG 0.532358 7_4:+41926890 None:intergenic
AATATTAATAACATGATGCC+AGG 0.537249 7_4:+41929029 None:intergenic
GCCGAAACTGCCTCAGGACC+GGG 0.539333 7_4:-41927261 Msa1154490:three_prime_UTR
TTAATATTCAATAGAGCAAG+TGG 0.539956 7_4:-41929014 Msa1154490:CDS
TTCACTGGCTTCATGGACCA+AGG 0.542874 7_4:-41927351 Msa1154490:three_prime_UTR
ACATACATTGTAGACAAGAA+AGG 0.548923 7_4:+41931601 None:intergenic
CAATGGTAACAGTATATACA+AGG 0.555614 7_4:-41931338 Msa1154490:intron
TCTACTGCCGAAACTGCCTC+AGG 0.557404 7_4:-41927267 Msa1154490:three_prime_UTR
ACTCCATCGGAATAAGAAAG+TGG 0.558490 7_4:-41928928 Msa1154490:CDS
CATTCAATCATCTACTCCAT+CGG 0.567427 7_4:-41928941 Msa1154490:CDS
AGAATGGAAGAAAGAAGGCG+TGG 0.571589 7_4:-41933498 Msa1154490:CDS
AGGATCCAGACCCGGTCCTG+AGG 0.571604 7_4:+41927251 None:intergenic
GGTGGTGGAAGTGAAGAGAA+TGG 0.575490 7_4:-41933514 Msa1154490:exon
ATACATAAAGAGGGCCAAGC+CGG 0.581300 7_4:-41931548 Msa1154490:CDS
CTTCATCCTGGAATTCTTAG+GGG 0.588521 7_4:-41926960 Msa1154490:three_prime_UTR
TGTTCCTAGATACATAAAGA+GGG 0.589944 7_4:-41931557 Msa1154490:CDS
TGCTGCAAATTGCATCGCCA+AGG 0.595152 7_4:-41927567 Msa1154490:CDS
TACAGAAAGATAAATGCTGA+AGG 0.596646 7_4:+41927982 None:intergenic
TAGTTGTAGACATGTTCTTG+TGG 0.599118 7_4:-41926831 Msa1154490:three_prime_UTR
CTGATGTGTAATTACTGCAG+TGG 0.599150 7_4:-41927295 Msa1154490:three_prime_UTR
GATTGAGTGCGTGCATTCTG+TGG 0.601362 7_4:-41931641 Msa1154490:CDS
TGGTGAAGTAGCAGCAACAA+AGG 0.605099 7_4:+41933338 None:intergenic
CCGGTCTTCATCATAAAAGA+GGG 0.605115 7_4:+41927454 None:intergenic
TCAATCGATATAATCTTCAG+TGG 0.606403 7_4:+41928984 None:intergenic
GGAAGGAGAGGATCCAGACC+CGG 0.607752 7_4:+41927243 None:intergenic
AATAAGGAGCTCAGTTGCAG+AGG 0.612296 7_4:-41927495 Msa1154490:CDS
TGTGGGATATGATGGCAAGA+GGG 0.614056 7_4:-41926933 Msa1154490:three_prime_UTR
AAGATTATATCGATTGAGGA+TGG 0.615033 7_4:-41928978 Msa1154490:CDS
ATTTGATGATGTTAATGCAA+AGG 0.615285 7_4:-41931470 Msa1154490:CDS
TTGTGGGATATGATGGCAAG+AGG 0.616877 7_4:-41926934 Msa1154490:three_prime_UTR
TGAATCTGAAGATCAATGGA+TGG 0.624411 7_4:-41927791 Msa1154490:CDS
GAGAGATGAAAATTTGGTGG+TGG 0.624563 7_4:-41933532 Msa1154490:five_prime_UTR
ACTACTGCAATCGTCCACCT+TGG 0.627663 7_4:+41927550 None:intergenic
ATCTATACTGGTAATAGACA+TGG 0.631503 7_4:-41927425 Msa1154490:CDS
GTGGGATATGATGGCAAGAG+GGG 0.634090 7_4:-41926932 Msa1154490:three_prime_UTR
TCTTGTTGTAGAAGAGGCTG+CGG 0.645792 7_4:+41931737 None:intergenic
CATCTTGACGGGGAAATGTG+TGG 0.645992 7_4:-41927600 Msa1154490:CDS
TCCATGCAGAAACAAATGAG+AGG 0.651196 7_4:-41931795 Msa1154490:intron
AAAGTACAGAGCTAAGCATG+AGG 0.659532 7_4:+41927320 None:intergenic
TCGAAGTTCTGAGCTGATGG+AGG 0.660339 7_4:-41928028 Msa1154490:CDS
TGCAAATTGCATCGCCAAGG+TGG 0.661401 7_4:-41927564 Msa1154490:CDS
GGCAAGAGGGGAAACTACAT+GGG 0.662560 7_4:-41926920 Msa1154490:three_prime_UTR
CGCATGTTCTGGAATCTATG+TGG 0.674123 7_4:+41933318 None:intergenic
GGCTGCGGATGACTTCGTCA+GGG 0.689665 7_4:+41931752 None:intergenic
GATCAATGGATGGAAGCCAA+TGG 0.707018 7_4:-41927781 Msa1154490:intron
GCAGCAACAAAGGAACGATG+AGG 0.717851 7_4:+41933348 None:intergenic
ATGTGAGCAACATCTTGACG+GGG 0.722873 7_4:-41927610 Msa1154490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAACATAGTATTTA+GGG + chr7_4:41927220-41927239 None:intergenic 10.0%
!! AAATAAATAACATAGTATTT+AGG + chr7_4:41927221-41927240 None:intergenic 10.0%
!! ATGTACAATATTTAATATAT+TGG + chr7_4:41931661-41931680 None:intergenic 10.0%
!!! GAATTTTGGTTTAATTTTTT+AGG - chr7_4:41927961-41927980 Msa1154490:CDS 15.0%
!! AAATGAAAATGACTAATATA+TGG + chr7_4:41928193-41928212 None:intergenic 15.0%
!!! ATTAGTCATTTTCATTTATT+TGG - chr7_4:41928196-41928215 Msa1154490:intron 15.0%
!! ATATACAAATGAAAATAACT+CGG + chr7_4:41928266-41928285 None:intergenic 15.0%
!! ATACAAAAAATCAAAATTTC+TGG + chr7_4:41928292-41928311 None:intergenic 15.0%
!! AATCAAATTTGTATACAAAA+GGG - chr7_4:41928436-41928455 Msa1154490:intron 15.0%
!! ACAGAATTTATTTATCAAAA+TGG + chr7_4:41929152-41929171 None:intergenic 15.0%
!! TTATTATGTTCAAAATTAGT+TGG - chr7_4:41929978-41929997 Msa1154490:intron 15.0%
!! TATAAAGAAATAACTATAGA+AGG + chr7_4:41930897-41930916 None:intergenic 15.0%
!!! TTATTACTTTTTATCAGTTT+TGG - chr7_4:41930920-41930939 Msa1154490:intron 15.0%
!!! AAAACTAATTTTGAAAGAAA+AGG + chr7_4:41931518-41931537 None:intergenic 15.0%
!!! TGAATCAAAAATACATTTTT+TGG + chr7_4:41932159-41932178 None:intergenic 15.0%
!!! ATTTTTTTTTCTCTATTAGT+TGG + chr7_4:41932954-41932973 None:intergenic 15.0%
!! AACTAATAGAGAAAAAAAAA+TGG - chr7_4:41932953-41932972 Msa1154490:intron 15.0%
!!! TTAGTTCTTTTCATCAAAAA+AGG + chr7_4:41927105-41927124 None:intergenic 20.0%
!!! TTTTTTGATGAAAAGAACTA+AGG - chr7_4:41927104-41927123 Msa1154490:three_prime_UTR 20.0%
!! TAATACATGGTATTATGTTA+TGG + chr7_4:41927563-41927582 None:intergenic 20.0%
!! TAATACCATATTAGAATTCT+GGG + chr7_4:41927696-41927715 None:intergenic 20.0%
!!! ATTAGCCTTATTAGAATTTT+GGG + chr7_4:41927913-41927932 None:intergenic 20.0%
!!! TATTAGCCTTATTAGAATTT+TGG + chr7_4:41927914-41927933 None:intergenic 20.0%
!!! TTGTTATAAGTCATGAATTT+TGG - chr7_4:41927947-41927966 Msa1154490:CDS 20.0%
!!! GTATAATAATTTTCTGTTGT+CGG - chr7_4:41927983-41928002 Msa1154490:CDS 20.0%
!!! CTATGATTTTTTATTGTGTA+TGG - chr7_4:41928222-41928241 Msa1154490:intron 20.0%
!! TATACAAATGAAAATAACTC+GGG + chr7_4:41928265-41928284 None:intergenic 20.0%
!! AAAGACAATGATTAACATAT+GGG + chr7_4:41928336-41928355 None:intergenic 20.0%
!! GAATCAAATTTGTATACAAA+AGG - chr7_4:41928435-41928454 Msa1154490:intron 20.0%
!! AGTATATAAATAAGGAGTTA+AGG - chr7_4:41929522-41929541 Msa1154490:intron 20.0%
!! CTTAAAAGATAAAATTGGTA+TGG + chr7_4:41930705-41930724 None:intergenic 20.0%
!! TGAGACTTAAAAGATAAAAT+TGG + chr7_4:41930710-41930729 None:intergenic 20.0%
!!! TGTTTTACACTTTTTCTTTT+TGG + chr7_4:41931855-41931874 None:intergenic 20.0%
!! AGGAAGAATTATTAAAATGA+AGG + chr7_4:41931949-41931968 None:intergenic 20.0%
!!! TATGAATGTGTTATTCATTT+TGG - chr7_4:41933481-41933500 Msa1154490:CDS 20.0%
!!! TTGGTAAGTATTCATTTTTT+GGG - chr7_4:41933530-41933549 Msa1154490:five_prime_UTR 20.0%
! TTCATCAAAAAAGGCAAAAA+GGG + chr7_4:41927096-41927115 None:intergenic 25.0%
! TTTCATCAAAAAAGGCAAAA+AGG + chr7_4:41927097-41927116 None:intergenic 25.0%
! TTGCATAAATTGCAAATCAT+AGG - chr7_4:41927241-41927260 Msa1154490:three_prime_UTR 25.0%
! AATCGTTATTGTACATAAGT+TGG - chr7_4:41927365-41927384 Msa1154490:three_prime_UTR 25.0%
!!! TCAACAAAAGTTGATGTATT+TGG + chr7_4:41927428-41927447 None:intergenic 25.0%
! GATGTATCTAATTCAATCAA+TGG + chr7_4:41927451-41927470 None:intergenic 25.0%
!!! TTAATCCATTACTTTTGTGT+TGG - chr7_4:41927479-41927498 Msa1154490:CDS 25.0%
! ATAATACCATGTATTAGACT+TGG - chr7_4:41927567-41927586 Msa1154490:CDS 25.0%
! CTAATACCATATTAGAATTC+TGG + chr7_4:41927697-41927716 None:intergenic 25.0%
! TTCAACCCAAAATTCTAATA+AGG - chr7_4:41927905-41927924 Msa1154490:CDS 25.0%
! AATGACTAATATATGGACAA+TGG + chr7_4:41928186-41928205 None:intergenic 25.0%
! AAGACAATGATTAACATATG+GGG + chr7_4:41928335-41928354 None:intergenic 25.0%
! CAAAGACAATGATTAACATA+TGG + chr7_4:41928337-41928356 None:intergenic 25.0%
! TTCATTAAAAACCAAAGTCA+TGG + chr7_4:41928380-41928399 None:intergenic 25.0%
! TGTAAAGGAATAATAAGAGA+TGG + chr7_4:41928410-41928429 None:intergenic 25.0%
!! ATTAAGTGCTTATTTGGAAT+GGG + chr7_4:41928470-41928489 None:intergenic 25.0%
!!! ATTTGATGATGTTAATGCAA+AGG - chr7_4:41928866-41928885 Msa1154490:CDS 25.0%
! ATGTTCAAGAGATAAAAATC+AGG - chr7_4:41929069-41929088 Msa1154490:intron 25.0%
! ATCACCTAAATTTCTTTGAA+CGG + chr7_4:41929243-41929262 None:intergenic 25.0%
! TGTTGAATAATAAAACCAGT+TGG - chr7_4:41929358-41929377 Msa1154490:intron 25.0%
! TGGGAGTAAGTATATAAATA+AGG - chr7_4:41929514-41929533 Msa1154490:intron 25.0%
!!! TGATTAGGTTTTAGAAGAAA+GGG - chr7_4:41929608-41929627 Msa1154490:intron 25.0%
!! CAATTATGAAATCAAGGTTT+TGG + chr7_4:41929706-41929725 None:intergenic 25.0%
!! CTCTAGAAATAAAACGAATA+AGG + chr7_4:41929773-41929792 None:intergenic 25.0%
!! GATAATGCTGTATTTAAAGT+TGG - chr7_4:41929877-41929896 Msa1154490:intron 25.0%
! ACTTGTATTACTTAATGAGT+TGG - chr7_4:41930001-41930020 Msa1154490:intron 25.0%
! ACTATCATTTAAGTCAGAAA+TGG + chr7_4:41930630-41930649 None:intergenic 25.0%
!! TGATAGTGAATCTTCTAAAT+TGG - chr7_4:41930643-41930662 Msa1154490:intron 25.0%
!!! AAAGGTACTTAACAAAAAAC+TGG + chr7_4:41930976-41930995 None:intergenic 25.0%
! TATAAAGACCATATGCTTTA+CGG + chr7_4:41931119-41931138 None:intergenic 25.0%
!! AATCTCTTATCTTTTCTGTT+TGG - chr7_4:41931182-41931201 Msa1154490:intron 25.0%
! AGATAAATAAACATGTGCTT+GGG + chr7_4:41931260-41931279 None:intergenic 25.0%
! TAGATAAATAAACATGTGCT+TGG + chr7_4:41931261-41931280 None:intergenic 25.0%
! AATATTAATAACATGATGCC+AGG + chr7_4:41931310-41931329 None:intergenic 25.0%
! TTAATATTCAATAGAGCAAG+TGG - chr7_4:41931322-41931341 Msa1154490:CDS 25.0%
! TTGGTTAAGGAAATCTAAAA+TGG - chr7_4:41931600-41931619 Msa1154490:CDS 25.0%
!! ATTTTCATTTCTTGACTAAC+CGG - chr7_4:41931692-41931711 Msa1154490:CDS 25.0%
! TATTAAAATGAAGGCTGAAA+CGG + chr7_4:41931940-41931959 None:intergenic 25.0%
!! TAAGAATGGAAGTATAAAGA+AGG + chr7_4:41931969-41931988 None:intergenic 25.0%
!! AAACTGATTCATCTCAAATA+AGG - chr7_4:41932825-41932844 Msa1154490:intron 25.0%
!!! ATTGATTTTTCTTGAAAGAG+TGG - chr7_4:41933138-41933157 Msa1154490:intron 25.0%
! TGTTTCTTTCACTGTTATAT+AGG - chr7_4:41933263-41933282 Msa1154490:CDS 25.0%
! ATTCTATTATTACTTCATCC+TGG - chr7_4:41933364-41933383 Msa1154490:CDS 25.0%
! TCAATCAATGATACAAATGA+AGG + chr7_4:41933449-41933468 None:intergenic 25.0%
!!! GTTGGTAAGTATTCATTTTT+TGG - chr7_4:41933529-41933548 Msa1154490:five_prime_UTR 25.0%
AAGAGAGAGAGATGAAAATT+TGG - chr7_4:41926798-41926817 Msa1154490:three_prime_UTR 30.0%
! TTGTTGTTGATCTTGATGTT+TGG + chr7_4:41926925-41926944 None:intergenic 30.0%
ACTAACACTAATTCACACAT+GGG + chr7_4:41927293-41927312 None:intergenic 30.0%
TACTAACACTAATTCACACA+TGG + chr7_4:41927294-41927313 None:intergenic 30.0%
!! TCAACATAAGTTGATGTATC+TGG - chr7_4:41927389-41927408 Msa1154490:exon 30.0%
GATTACCAACACAAAAGTAA+TGG + chr7_4:41927487-41927506 None:intergenic 30.0%
GTTCTACATTGAATGAGATA+AGG - chr7_4:41927814-41927833 Msa1154490:CDS 30.0%
! TAATTTTCTGTTGTCGGATT+TGG - chr7_4:41927989-41928008 Msa1154490:CDS 30.0%
ACAAGAAAAACATACACTCA+AGG + chr7_4:41928141-41928160 None:intergenic 30.0%
! TGAGTGTATGTTTTTCTTGT+AGG - chr7_4:41928141-41928160 Msa1154490:intron 30.0%
! GAGTGTATGTTTTTCTTGTA+GGG - chr7_4:41928142-41928161 Msa1154490:intron 30.0%
ATAACTCGGGTAATTATCAA+TGG + chr7_4:41928252-41928271 None:intergenic 30.0%
ATGATTAACATATGGGGAAT+GGG + chr7_4:41928329-41928348 None:intergenic 30.0%
AATGATTAACATATGGGGAA+TGG + chr7_4:41928330-41928349 None:intergenic 30.0%
! AATTTGATTCGACAGTGTAA+AGG + chr7_4:41928425-41928444 None:intergenic 30.0%
GATTAAGTGCTTATTTGGAA+TGG + chr7_4:41928471-41928490 None:intergenic 30.0%
CCAATGATTAAGTGCTTATT+TGG + chr7_4:41928476-41928495 None:intergenic 30.0%
CCAAATAAGCACTTAATCAT+TGG - chr7_4:41928473-41928492 Msa1154490:intron 30.0%
GAACAATGACTCACTTATTA+CGG - chr7_4:41928620-41928639 Msa1154490:intron 30.0%
ACATACATTGTAGACAAGAA+AGG + chr7_4:41928738-41928757 None:intergenic 30.0%
TTGTTCCTAGATACATAAAG+AGG - chr7_4:41928778-41928797 Msa1154490:intron 30.0%
TGTTCCTAGATACATAAAGA+GGG - chr7_4:41928779-41928798 Msa1154490:intron 30.0%
AGGGGGTAAGATAAAATAAT+GGG + chr7_4:41928972-41928991 None:intergenic 30.0%
AAGGGGGTAAGATAAAATAA+TGG + chr7_4:41928973-41928992 None:intergenic 30.0%
CTTGTATATACTGTTACCAT+TGG + chr7_4:41929000-41929019 None:intergenic 30.0%
CAATGGTAACAGTATATACA+AGG - chr7_4:41928998-41929017 Msa1154490:CDS 30.0%
GAAACCGTTCAAAGAAATTT+AGG - chr7_4:41929236-41929255 Msa1154490:intron 30.0%
GTTCAAAGAAATTTAGGTGA+TGG - chr7_4:41929242-41929261 Msa1154490:intron 30.0%
GCAATATTCACTACAATAGT+GGG + chr7_4:41929291-41929310 None:intergenic 30.0%
TGCAATATTCACTACAATAG+TGG + chr7_4:41929292-41929311 None:intergenic 30.0%
CTATTGTAGTGAATATTGCA+AGG - chr7_4:41929292-41929311 Msa1154490:intron 30.0%
! TACCTTAAATGATTTTGAGC+AGG - chr7_4:41929332-41929351 Msa1154490:intron 30.0%
AACCTGCTCAAAATCATTTA+AGG + chr7_4:41929337-41929356 None:intergenic 30.0%
TACTGATGGTTATTTGTAGT+TGG - chr7_4:41929494-41929513 Msa1154490:intron 30.0%
ACTGATGGTTATTTGTAGTT+GGG - chr7_4:41929495-41929514 Msa1154490:intron 30.0%
GAGAAACCTTATGATATTGT+CGG - chr7_4:41929574-41929593 Msa1154490:intron 30.0%
!!! GTGATTAGGTTTTAGAAGAA+AGG - chr7_4:41929607-41929626 Msa1154490:intron 30.0%
CACCATTTCATAAGTATCAA+TGG - chr7_4:41929676-41929695 Msa1154490:intron 30.0%
CTCCATTGATACTTATGAAA+TGG + chr7_4:41929681-41929700 None:intergenic 30.0%
AACCTTGATTTCATAATTGC+AGG - chr7_4:41929707-41929726 Msa1154490:intron 30.0%
ACCTTGATTTCATAATTGCA+GGG - chr7_4:41929708-41929727 Msa1154490:intron 30.0%
!! GTATTACTTAATGAGTTGGT+AGG - chr7_4:41930005-41930024 Msa1154490:intron 30.0%
!!! CTAGCTTTGACATTTTTCTT+TGG - chr7_4:41930093-41930112 Msa1154490:intron 30.0%
TAAGAAACTGTTGACCTAAA+TGG - chr7_4:41930150-41930169 Msa1154490:intron 30.0%
AAGAAACTGTTGACCTAAAT+GGG - chr7_4:41930151-41930170 Msa1154490:intron 30.0%
!! GAATTTGGGTTCTTTTTCTA+GGG - chr7_4:41930461-41930480 Msa1154490:intron 30.0%
!! AATTTGGGTTCTTTTTCTAG+GGG - chr7_4:41930462-41930481 Msa1154490:intron 30.0%
GAACACTATAAATTGAGGAT+AGG + chr7_4:41930564-41930583 None:intergenic 30.0%
GTCTTGAACACTATAAATTG+AGG + chr7_4:41930569-41930588 None:intergenic 30.0%
AAAAGACTCATCTTCTTTCT+AGG - chr7_4:41930600-41930619 Msa1154490:intron 30.0%
! AATCTTCTAAATTGGTGACA+GGG - chr7_4:41930651-41930670 Msa1154490:intron 30.0%
! TTTTTGTTAAGTACCTTTGC+TGG - chr7_4:41930978-41930997 Msa1154490:intron 30.0%
TTTGTAATCCATGCTACATT+TGG - chr7_4:41931036-41931055 Msa1154490:intron 30.0%
AAATGAAACCAAATGTAGCA+TGG + chr7_4:41931047-41931066 None:intergenic 30.0%
! ATGCTACATTTGGTTTCATT+TGG - chr7_4:41931046-41931065 Msa1154490:intron 30.0%
TCTATTTACCGTAAAGCATA+TGG - chr7_4:41931108-41931127 Msa1154490:intron 30.0%
TCAATCGATATAATCTTCAG+TGG + chr7_4:41931355-41931374 None:intergenic 30.0%
! ACTGAAGATTATATCGATTG+AGG - chr7_4:41931354-41931373 Msa1154490:intron 30.0%
! AAGATTATATCGATTGAGGA+TGG - chr7_4:41931358-41931377 Msa1154490:intron 30.0%
TAATAAACAAACGCAAGTGA+AGG + chr7_4:41931884-41931903 None:intergenic 30.0%
TTGCGTTTGTTTATTACACA+TGG - chr7_4:41931888-41931907 Msa1154490:intron 30.0%
GGGAGAGAAAAATTTAAGAA+TGG + chr7_4:41931983-41932002 None:intergenic 30.0%
! TTTTTCTCTCCCTAAAACAA+TGG - chr7_4:41931991-41932010 Msa1154490:intron 30.0%
!! AATGTATTTTTGATTCACCC+CGG - chr7_4:41932162-41932181 Msa1154490:intron 30.0%
GAGATGCTGAATAAGAAAAA+CGG + chr7_4:41932245-41932264 None:intergenic 30.0%
TACAGAAAGATAAATGCTGA+AGG + chr7_4:41932357-41932376 None:intergenic 30.0%
CATATACATAACAAGTGATC+AGG - chr7_4:41932497-41932516 Msa1154490:intron 30.0%
ATCTTAGAGATAATCACCAT+TGG + chr7_4:41932574-41932593 None:intergenic 30.0%
ATCTATACTGGTAATAGACA+TGG - chr7_4:41932911-41932930 Msa1154490:intron 30.0%
TGAACAAATCACTCTATAAC+TGG + chr7_4:41933224-41933243 None:intergenic 30.0%
!! AGTTATAGAGTGATTTGTTC+AGG - chr7_4:41933223-41933242 Msa1154490:CDS 30.0%
CTCATCTGACACAAAATATA+TGG + chr7_4:41933338-41933357 None:intergenic 30.0%
AGAGAGAGATGAAAATTTGG+TGG - chr7_4:41926801-41926820 Msa1154490:three_prime_UTR 35.0%
TGAAGAGAATGGAAGAAAGA+AGG - chr7_4:41926833-41926852 Msa1154490:three_prime_UTR 35.0%
ATTGTTTGAGGATTCACCTT+TGG + chr7_4:41926893-41926912 None:intergenic 35.0%
AAAGGTGAATCCTCAAACAA+TGG - chr7_4:41926892-41926911 Msa1154490:three_prime_UTR 35.0%
GTTGATCTTGATGTTTGGTT+TGG + chr7_4:41926920-41926939 None:intergenic 35.0%
GAAGGAGAAGAATGATGTTT+AGG + chr7_4:41927072-41927091 None:intergenic 35.0%
AAAAAAGGCAAAAAGGGTGA+AGG + chr7_4:41927090-41927109 None:intergenic 35.0%
TACACACACACAAGTCAAAA+AGG + chr7_4:41927343-41927362 None:intergenic 35.0%
CTCTTACCAAGTCTAATACA+TGG + chr7_4:41927576-41927595 None:intergenic 35.0%
TAAGGCTTGATGTTGAACAT+GGG - chr7_4:41927602-41927621 Msa1154490:CDS 35.0%
CCATATTAGAATTCTGGGTT+CGG + chr7_4:41927691-41927710 None:intergenic 35.0%
CTACTTATAAACCCATGTTC+AGG + chr7_4:41927840-41927859 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG + chr7_4:41927884-41927903 None:intergenic 35.0%
TTCTATACAGTTGTGTAGTG+TGG - chr7_4:41928013-41928032 Msa1154490:CDS 35.0%
GGAATCTCATGAAGATCAAA+CGG + chr7_4:41928120-41928139 None:intergenic 35.0%
TGATTAACATATGGGGAATG+GGG + chr7_4:41928328-41928347 None:intergenic 35.0%
GTGTATAAAAGCCATGACTT+TGG - chr7_4:41928366-41928385 Msa1154490:intron 35.0%
TTATAGAAGTCACGACTTTC+TGG - chr7_4:41928502-41928521 Msa1154490:intron 35.0%
! CATTGTTCTTGTTGTAGAAG+AGG + chr7_4:41928608-41928627 None:intergenic 35.0%
! TTTAAAATGGCCTGGATTTG+TGG - chr7_4:41928842-41928861 Msa1154490:intron 35.0%
TCATCAAATTCCACAAATCC+AGG + chr7_4:41928855-41928874 None:intergenic 35.0%
! GGGTAAGATAAAATAATGGG+TGG + chr7_4:41928969-41928988 None:intergenic 35.0%
ACTGTTACCATTGGAAAGAA+GGG + chr7_4:41928991-41929010 None:intergenic 35.0%
TACTGTTACCATTGGAAAGA+AGG + chr7_4:41928992-41929011 None:intergenic 35.0%
TGCTATACTCGATTTCAGAT+AGG - chr7_4:41929045-41929064 Msa1154490:intron 35.0%
TTTCAAAGTGATGTGTGTGA+GGG + chr7_4:41929214-41929233 None:intergenic 35.0%
! TTTTCAAAGTGATGTGTGTG+AGG + chr7_4:41929215-41929234 None:intergenic 35.0%
! AATTTAGGTGATGGCTTAGT+AGG - chr7_4:41929251-41929270 Msa1154490:intron 35.0%
! AGAAAGACTCTTTGAAGAAG+AGG - chr7_4:41929468-41929487 Msa1154490:intron 35.0%
TGAAGAAGAGGAATTACTGA+TGG - chr7_4:41929480-41929499 Msa1154490:intron 35.0%
AGTTAAGGTAGAAAAGTCTC+AGG - chr7_4:41929537-41929556 Msa1154490:intron 35.0%
! ACCTTATGATATTGTCGGTT+AGG - chr7_4:41929579-41929598 Msa1154490:intron 35.0%
! CCTTATGATATTGTCGGTTA+GGG - chr7_4:41929580-41929599 Msa1154490:intron 35.0%
AGATGTAGAAGTTGAATTCC+AGG - chr7_4:41929640-41929659 Msa1154490:intron 35.0%
GAATTCCAGGATTTATTGTG+TGG - chr7_4:41929653-41929672 Msa1154490:intron 35.0%
CCTTGATTTCATAATTGCAG+GGG - chr7_4:41929709-41929728 Msa1154490:intron 35.0%
AGATCCTTTATCTCAGGTTT+CGG - chr7_4:41929737-41929756 Msa1154490:intron 35.0%
AGCAATAAAAGTTAGCAAGC+AGG - chr7_4:41929791-41929810 Msa1154490:intron 35.0%
TAACTCTTCTGAATCCATCA+TGG + chr7_4:41929830-41929849 None:intergenic 35.0%
TCATCAAAGTCATCCAAGTT+CGG + chr7_4:41929937-41929956 None:intergenic 35.0%
ACTTTGATGAGAGAATTCAC+TGG - chr7_4:41929947-41929966 Msa1154490:intron 35.0%
CTTTGATGAGAGAATTCACT+GGG - chr7_4:41929948-41929967 Msa1154490:intron 35.0%
!! GCTTTAAGAAGGATTGAGTT+TGG - chr7_4:41930037-41930056 Msa1154490:intron 35.0%
TCCTTTAGCATTATGTTACC+TGG - chr7_4:41930125-41930144 Msa1154490:intron 35.0%
TCCAGGTAACATAATGCTAA+AGG + chr7_4:41930129-41930148 None:intergenic 35.0%
AAGCTTCTCATTTAGACGAT+GGG - chr7_4:41930196-41930215 Msa1154490:intron 35.0%
TCAAAGACCCTAATTATGGT+GGG + chr7_4:41930365-41930384 None:intergenic 35.0%
!! CGAATTTGGGTTCTTTTTCT+AGG - chr7_4:41930460-41930479 Msa1154490:intron 35.0%
!! ATTTGGGTTCTTTTTCTAGG+GGG - chr7_4:41930463-41930482 Msa1154490:intron 35.0%
AAAGCCACAAACATGGTATT+GGG + chr7_4:41930508-41930527 None:intergenic 35.0%
AAAAGCCACAAACATGGTAT+TGG + chr7_4:41930509-41930528 None:intergenic 35.0%
! TGGCTTTTGCTCAACTTTAT+AGG - chr7_4:41930521-41930540 Msa1154490:intron 35.0%
! GAATCTTCTAAATTGGTGAC+AGG - chr7_4:41930650-41930669 Msa1154490:intron 35.0%
AATGAACTGCTACATCTTTG+TGG - chr7_4:41930816-41930835 Msa1154490:intron 35.0%
ATGAACTGCTACATCTTTGT+GGG - chr7_4:41930817-41930836 Msa1154490:intron 35.0%
GTTATGTCTGGTGATAACAT+AGG - chr7_4:41930869-41930888 Msa1154490:intron 35.0%
CTTAACAAAAAACTGGTCCA+AGG + chr7_4:41930969-41930988 None:intergenic 35.0%
!!! GTACCTTTGCTGGTTTTAAT+AGG - chr7_4:41930988-41931007 Msa1154490:intron 35.0%
GCATAGTGCTATCATCTTTA+AGG - chr7_4:41931078-41931097 Msa1154490:intron 35.0%
!! GTGCTATCATCTTTAAGGTT+TGG - chr7_4:41931083-41931102 Msa1154490:intron 35.0%
CATTCAATCATCTACTCCAT+CGG - chr7_4:41931395-41931414 Msa1154490:intron 35.0%
GTCTCACATCAAGAATTTGA+AGG + chr7_4:41931486-41931505 None:intergenic 35.0%
! AATCACTTTCCTAAGAGCAT+TGG - chr7_4:41931581-41931600 Msa1154490:CDS 35.0%
!! TTTCCTAAGAGCATTGGTTA+AGG - chr7_4:41931587-41931606 Msa1154490:CDS 35.0%
TTTCCTTAACCAATGCTCTT+AGG + chr7_4:41931593-41931612 None:intergenic 35.0%
!! TTAGAGGCTATGTTTTGGAT+TGG - chr7_4:41931719-41931738 Msa1154490:CDS 35.0%
GTGAATGAGATAGAATGCAA+GGG - chr7_4:41931741-41931760 Msa1154490:CDS 35.0%
! AAAACAAGCTTTTACCGACA+GGG + chr7_4:41931822-41931841 None:intergenic 35.0%
! TAAAACAAGCTTTTACCGAC+AGG + chr7_4:41931823-41931842 None:intergenic 35.0%
!! AATGGAGCTCCATTGTTTTA+GGG + chr7_4:41932003-41932022 None:intergenic 35.0%
! TTTTTAGACTGTAGAGATGG+TGG + chr7_4:41932062-41932081 None:intergenic 35.0%
! GTCTTTTTAGACTGTAGAGA+TGG + chr7_4:41932065-41932084 None:intergenic 35.0%
! TTAGAAGATTGTGTTGGTGA+GGG + chr7_4:41932133-41932152 None:intergenic 35.0%
! TTTAGAAGATTGTGTTGGTG+AGG + chr7_4:41932134-41932153 None:intergenic 35.0%
TGGTGTTTAGAAGATTGTGT+TGG + chr7_4:41932139-41932158 None:intergenic 35.0%
!! ATGTATTTTTGATTCACCCC+GGG - chr7_4:41932163-41932182 Msa1154490:intron 35.0%
! CTGTTCGATTTCTGAAAGTA+AGG + chr7_4:41932395-41932414 None:intergenic 35.0%
AAGCTGAATCTGAAGATCAA+TGG - chr7_4:41932541-41932560 Msa1154490:intron 35.0%
TGAATCTGAAGATCAATGGA+TGG - chr7_4:41932545-41932564 Msa1154490:intron 35.0%
GACATGGTTATGTTCATGTA+TGG - chr7_4:41932927-41932946 Msa1154490:intron 35.0%
TACTTCATCCTGGAATTCTT+AGG - chr7_4:41933374-41933393 Msa1154490:CDS 35.0%
ACTTCATCCTGGAATTCTTA+GGG - chr7_4:41933375-41933394 Msa1154490:CDS 35.0%
TAGTTGTAGACATGTTCTTG+TGG - chr7_4:41933505-41933524 Msa1154490:exon 35.0%
! GAGAGATGAAAATTTGGTGG+TGG - chr7_4:41926804-41926823 Msa1154490:three_prime_UTR 40.0%
!! AGATGAAAATTTGGTGGTGG+TGG - chr7_4:41926807-41926826 Msa1154490:three_prime_UTR 40.0%
! TGGTTTGGAACCATTGTTTG+AGG + chr7_4:41926905-41926924 None:intergenic 40.0%
ACAAAGGAACGATGAGGTTT+AGG + chr7_4:41926985-41927004 None:intergenic 40.0%
!!! CTTTGTGCTGCTTTTAGTAG+AGG - chr7_4:41927180-41927199 Msa1154490:three_prime_UTR 40.0%
ACACACAAGTCAAAAAGGCA+AGG + chr7_4:41927338-41927357 None:intergenic 40.0%
GTTCAACATCAAGCCTTAGT+GGG + chr7_4:41927600-41927619 None:intergenic 40.0%
TGTTCAACATCAAGCCTTAG+TGG + chr7_4:41927601-41927620 None:intergenic 40.0%
CTAAGGCTTGATGTTGAACA+TGG - chr7_4:41927601-41927620 Msa1154490:CDS 40.0%
GAACATGGGTTTATAAGCAG+AGG - chr7_4:41927616-41927635 Msa1154490:CDS 40.0%
TGTAAGGTGAGAAGTGAGAA+CGG + chr7_4:41927642-41927661 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG + chr7_4:41927658-41927677 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG - chr7_4:41927655-41927674 Msa1154490:intron 40.0%
!! TACAAGCCAGTTTTGTAAGG+TGG - chr7_4:41927658-41927677 Msa1154490:intron 40.0%
CTAACTCCACCTTACAAAAC+TGG + chr7_4:41927667-41927686 None:intergenic 40.0%
!! CAGTTTTGTAAGGTGGAGTT+AGG - chr7_4:41927665-41927684 Msa1154490:intron 40.0%
CCGAACCCAGAATTCTAATA+TGG - chr7_4:41927688-41927707 Msa1154490:intron 40.0%
CATGATAGCAAGTGGTCAAA+CGG + chr7_4:41927734-41927753 None:intergenic 40.0%
AATGAGATAAGGCCTGAACA+TGG - chr7_4:41927825-41927844 Msa1154490:CDS 40.0%
ATGAGATAAGGCCTGAACAT+GGG - chr7_4:41927826-41927845 Msa1154490:CDS 40.0%
!! CCTTACAAAACCGGTTTGTA+AGG + chr7_4:41927875-41927894 None:intergenic 40.0%
!! CCTTACAAACCGGTTTTGTA+AGG - chr7_4:41927872-41927891 Msa1154490:CDS 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG - chr7_4:41927882-41927901 Msa1154490:CDS 40.0%
! GGATGTCGATTGTTAGATGA+AGG - chr7_4:41928034-41928053 Msa1154490:intron 40.0%
AAGATCAAACGGCTCGTATT+CGG + chr7_4:41928109-41928128 None:intergenic 40.0%
GACAATGGATAATGCAGATG+TGG + chr7_4:41928171-41928190 None:intergenic 40.0%
TCCATGCAGAAACAAATGAG+AGG - chr7_4:41928541-41928560 Msa1154490:intron 40.0%
!! TCCTCTCATTTGTTTCTGCA+TGG + chr7_4:41928545-41928564 None:intergenic 40.0%
!! CTTTGAAGTGCAGATCTACA+AGG - chr7_4:41928673-41928692 Msa1154490:intron 40.0%
TTGGCCCTCTTTATGTATCT+AGG + chr7_4:41928786-41928805 None:intergenic 40.0%
! TCCAGTCCGAGTCTTTAAAA+TGG - chr7_4:41928829-41928848 Msa1154490:intron 40.0%
!! TCCAGGCCATTTTAAAGACT+CGG + chr7_4:41928838-41928857 None:intergenic 40.0%
TATCTTGCGCAGAGTATGTT+AGG + chr7_4:41928893-41928912 None:intergenic 40.0%
TAACATACTCTGCGCAAGAT+AGG - chr7_4:41928892-41928911 Msa1154490:CDS 40.0%
GATAGAAGTAGAACGGAAAG+AGG + chr7_4:41928935-41928954 None:intergenic 40.0%
GACACGTGATAGAAGTAGAA+CGG + chr7_4:41928942-41928961 None:intergenic 40.0%
TGTTACCATTGGAAAGAAGG+GGG + chr7_4:41928989-41929008 None:intergenic 40.0%
CTGTTACCATTGGAAAGAAG+GGG + chr7_4:41928990-41929009 None:intergenic 40.0%
CACTTTCTGCTTAGCAGTTT+CGG - chr7_4:41929112-41929131 Msa1154490:intron 40.0%
TTCAAAGTGATGTGTGTGAG+GGG + chr7_4:41929213-41929232 None:intergenic 40.0%
ACCAAAGACTTGGGTGAAAT+AGG - chr7_4:41929383-41929402 Msa1154490:intron 40.0%
ACTTGGGTGAAATAGGCTAA+GGG - chr7_4:41929390-41929409 Msa1154490:intron 40.0%
CCCTAACCGACAATATCATA+AGG + chr7_4:41929583-41929602 None:intergenic 40.0%
! TGATATTGTCGGTTAGGGTT+TGG - chr7_4:41929585-41929604 Msa1154490:intron 40.0%
CCCCTGCAATTATGAAATCA+AGG + chr7_4:41929712-41929731 None:intergenic 40.0%
GCAAACAGATCCTTTATCTC+AGG - chr7_4:41929731-41929750 Msa1154490:intron 40.0%
GATCCTTTATCTCAGGTTTC+GGG - chr7_4:41929738-41929757 Msa1154490:intron 40.0%
ATCCTTTATCTCAGGTTTCG+GGG - chr7_4:41929739-41929758 Msa1154490:intron 40.0%
CTCTCATTTGCAGTTTGATG+TGG - chr7_4:41929855-41929874 Msa1154490:intron 40.0%
!! GGTCTGTTGTTGCTTTAAGA+AGG - chr7_4:41930026-41930045 Msa1154490:intron 40.0%
AAACTGTTGACCTAAATGGG+AGG - chr7_4:41930154-41930173 Msa1154490:intron 40.0%
AACTGTTGACCTAAATGGGA+GGG - chr7_4:41930155-41930174 Msa1154490:intron 40.0%
TATTTGCATCCCTCCCATTT+AGG + chr7_4:41930167-41930186 None:intergenic 40.0%
CATCGTCTAAATGAGAAGCT+TGG + chr7_4:41930197-41930216 None:intergenic 40.0%
CAAGCTTCTCATTTAGACGA+TGG - chr7_4:41930195-41930214 Msa1154490:intron 40.0%
GCCATTGCTTTGCTAGAAAT+AGG - chr7_4:41930248-41930267 Msa1154490:intron 40.0%
!! GCCTATTTCTAGCAAAGCAA+TGG + chr7_4:41930252-41930271 None:intergenic 40.0%
! GTGGACCTCATGTTATCTTT+TGG - chr7_4:41930273-41930292 Msa1154490:intron 40.0%
! GACCTCATGTTATCTTTTGG+AGG - chr7_4:41930276-41930295 Msa1154490:intron 40.0%
GTCCTCCAAAAGATAACATG+AGG + chr7_4:41930281-41930300 None:intergenic 40.0%
!! GTTATCTTTTGGAGGACCAT+TGG - chr7_4:41930284-41930303 Msa1154490:intron 40.0%
AGCAAAAGCGAAAATCGAAG+AGG + chr7_4:41930318-41930337 None:intergenic 40.0%
TCTGCTTACCCACCATAATT+AGG - chr7_4:41930354-41930373 Msa1154490:intron 40.0%
CTGCTTACCCACCATAATTA+GGG - chr7_4:41930355-41930374 Msa1154490:intron 40.0%
GTCAAAGACCCTAATTATGG+TGG + chr7_4:41930366-41930385 None:intergenic 40.0%
GTGGTCAAAGACCCTAATTA+TGG + chr7_4:41930369-41930388 None:intergenic 40.0%
AATCCTCCAGGAATCGAATT+TGG - chr7_4:41930446-41930465 Msa1154490:intron 40.0%
ATCCTCCAGGAATCGAATTT+GGG - chr7_4:41930447-41930466 Msa1154490:intron 40.0%
AAGAACCCAAATTCGATTCC+TGG + chr7_4:41930455-41930474 None:intergenic 40.0%
!! TTTGGGTTCTTTTTCTAGGG+GGG - chr7_4:41930464-41930483 Msa1154490:intron 40.0%
!! TATTGGGAGAGTTGGTAACA+TGG + chr7_4:41930492-41930511 None:intergenic 40.0%
! AAACATGGTATTGGGAGAGT+TGG + chr7_4:41930500-41930519 None:intergenic 40.0%
TTGAGCAAAAGCCACAAACA+TGG + chr7_4:41930515-41930534 None:intergenic 40.0%
! GTTAGTCTCTTGATCCTTCT+AGG - chr7_4:41930673-41930692 Msa1154490:intron 40.0%
TGGCCTATTAAAACCAGCAA+AGG + chr7_4:41930994-41931013 None:intergenic 40.0%
! TTCGTCTTTTGTTACAGTCC+TGG - chr7_4:41931289-41931308 Msa1154490:CDS 40.0%
ACTCCATCGGAATAAGAAAG+TGG - chr7_4:41931408-41931427 Msa1154490:intron 40.0%
AGTCCACTTTCTTATTCCGA+TGG + chr7_4:41931414-41931433 None:intergenic 40.0%
TGAAAAGCTTCTAGTCAAGC+AGG - chr7_4:41931450-41931469 Msa1154490:CDS 40.0%
AAACATAGCCTCTAACGTAC+CGG + chr7_4:41931714-41931733 None:intergenic 40.0%
! GTACGTTAGAGGCTATGTTT+TGG - chr7_4:41931714-41931733 Msa1154490:CDS 40.0%
GGTGAATGAGATAGAATGCA+AGG - chr7_4:41931740-41931759 Msa1154490:CDS 40.0%
TGAGATAGAATGCAAGGGAA+TGG - chr7_4:41931746-41931765 Msa1154490:CDS 40.0%
TAGAATGCAAGGGAATGGAA+TGG - chr7_4:41931751-41931770 Msa1154490:CDS 40.0%
AGAATGCAAGGGAATGGAAT+GGG - chr7_4:41931752-41931771 Msa1154490:CDS 40.0%
GATTGAAAGTTATGCCCTGT+CGG - chr7_4:41931805-41931824 Msa1154490:intron 40.0%
TAAAATGAAGGCTGAAACGG+TGG + chr7_4:41931937-41931956 None:intergenic 40.0%
! CAATGGAGCTCCATTGTTTT+AGG + chr7_4:41932004-41932023 None:intergenic 40.0%
!! TGTATTTTTGATTCACCCCG+GGG - chr7_4:41932164-41932183 Msa1154490:intron 40.0%
CTGTTTGTGCGATATTTCAC+AGG - chr7_4:41932284-41932303 Msa1154490:intron 40.0%
GAAATCGAACAGTTTCTGTC+TGG - chr7_4:41932403-41932422 Msa1154490:intron 40.0%
CGAACTTGTCACATCATTTG+AGG - chr7_4:41932437-41932456 Msa1154490:intron 40.0%
CATTTGAGGATCACCTGTTA+TGG - chr7_4:41932451-41932470 Msa1154490:intron 40.0%
! ATGTTGTTTGTGTTGCAGTC+TGG + chr7_4:41932480-41932499 None:intergenic 40.0%
CTTTGCAGTACGAGATAATC+AGG + chr7_4:41932524-41932543 None:intergenic 40.0%
AAATTTCTTGTTGCCACAGC+CGG - chr7_4:41932695-41932714 Msa1154490:intron 40.0%
GTTGCTCACATTGATAGAAC+CGG + chr7_4:41932717-41932736 None:intergenic 40.0%
CAATGTGAGCAACATCTTGA+CGG - chr7_4:41932724-41932743 Msa1154490:intron 40.0%
AATGTGAGCAACATCTTGAC+GGG - chr7_4:41932725-41932744 Msa1154490:intron 40.0%
CCGGTCTTCATCATAAAAGA+GGG + chr7_4:41932885-41932904 None:intergenic 40.0%
! CCCTCTTTTATGATGAAGAC+CGG - chr7_4:41932882-41932901 Msa1154490:intron 40.0%
TCCGGTCTTCATCATAAAAG+AGG + chr7_4:41932886-41932905 None:intergenic 40.0%
TACCAGTATAGATCTCGTTC+CGG + chr7_4:41932904-41932923 None:intergenic 40.0%
AAATGGCTGTGTTTCTTCAC+TGG - chr7_4:41932970-41932989 Msa1154490:intron 40.0%
! AGCATGAGGATTCTTTTCCT+TGG + chr7_4:41933005-41933024 None:intergenic 40.0%
AAAGTACAGAGCTAAGCATG+AGG + chr7_4:41933019-41933038 None:intergenic 40.0%
CTGATGTGTAATTACTGCAG+TGG - chr7_4:41933041-41933060 Msa1154490:intron 40.0%
ATGAGAGAGAGAGACATAGA+GGG + chr7_4:41933120-41933139 None:intergenic 40.0%
AATGAGAGAGAGAGACATAG+AGG + chr7_4:41933121-41933140 None:intergenic 40.0%
!! GAAAGAGTGGATATTGACTC+AGG - chr7_4:41933151-41933170 Msa1154490:intron 40.0%
!! GGATATTGACTCAGGATTGT+AGG - chr7_4:41933159-41933178 Msa1154490:CDS 40.0%
CTTCATCCTGGAATTCTTAG+GGG - chr7_4:41933376-41933395 Msa1154490:CDS 40.0%
GAATTCTTAGGGGACTTTGT+GGG - chr7_4:41933386-41933405 Msa1154490:CDS 40.0%
TAGACATGTTCTTGTGGTGT+TGG - chr7_4:41933511-41933530 Msa1154490:exon 40.0%
AGAATGGAAGAAAGAAGGCG+TGG - chr7_4:41926838-41926857 Msa1154490:three_prime_UTR 45.0%
! AAGAAAGAAGGCGTGGAGTT+TGG - chr7_4:41926845-41926864 Msa1154490:three_prime_UTR 45.0%
TGGTGAAGTAGCAGCAACAA+AGG + chr7_4:41927001-41927020 None:intergenic 45.0%
!! CGCATGTTCTGGAATCTATG+TGG + chr7_4:41927021-41927040 None:intergenic 45.0%
GATGAGTCAAACGCATGTTC+TGG + chr7_4:41927032-41927051 None:intergenic 45.0%
GTCTTTGCTCTTGCTCATTC+TGG - chr7_4:41927156-41927175 Msa1154490:three_prime_UTR 45.0%
ACTTGGTAAGAGTCCCACTA+AGG - chr7_4:41927584-41927603 Msa1154490:CDS 45.0%
TGGTCAAACGGATCTTGGAT+AGG + chr7_4:41927722-41927741 None:intergenic 45.0%
!! CACTTGCTATCATGCCACTT+GGG - chr7_4:41927740-41927759 Msa1154490:intron 45.0%
ACATATGGGGAATGGGGAAA+TGG + chr7_4:41928322-41928341 None:intergenic 45.0%
! TCTTGTTGTAGAAGAGGCTG+CGG + chr7_4:41928602-41928621 None:intergenic 45.0%
ATACATAAAGAGGGCCAAGC+CGG - chr7_4:41928788-41928807 Msa1154490:intron 45.0%
AAAAGAGGAAAACCGGCATC+CGG + chr7_4:41928810-41928829 None:intergenic 45.0%
GGACTGGAAAAGAGGAAAAC+CGG + chr7_4:41928817-41928836 None:intergenic 45.0%
! AAAGACTCGGACTGGAAAAG+AGG + chr7_4:41928825-41928844 None:intergenic 45.0%
!! GCCATTTTAAAGACTCGGAC+TGG + chr7_4:41928833-41928852 None:intergenic 45.0%
!! TCCGAGTCTTTAAAATGGCC+TGG - chr7_4:41928834-41928853 Msa1154490:intron 45.0%
AACGGAAAGAGGAAGAGTGA+AGG + chr7_4:41928924-41928943 None:intergenic 45.0%
TCTTACCCCCTTCTTTCCAA+TGG - chr7_4:41928981-41929000 Msa1154490:CDS 45.0%
TCAAAGTGATGTGTGTGAGG+GGG + chr7_4:41929212-41929231 None:intergenic 45.0%
CAGTTGGAGACCAAAGACTT+GGG - chr7_4:41929374-41929393 Msa1154490:intron 45.0%
GCCTATTTCACCCAAGTCTT+TGG + chr7_4:41929387-41929406 None:intergenic 45.0%
GACTTGGGTGAAATAGGCTA+AGG - chr7_4:41929389-41929408 Msa1154490:intron 45.0%
!! TCGGTTAGGGTTTGGTGATT+AGG - chr7_4:41929593-41929612 Msa1154490:intron 45.0%
!! TGGTGCCACACAATAAATCC+TGG + chr7_4:41929661-41929680 None:intergenic 45.0%
TCCTTTATCTCAGGTTTCGG+GGG - chr7_4:41929740-41929759 Msa1154490:intron 45.0%
ATCCATCATGGCTGCTCTAA+TGG + chr7_4:41929818-41929837 None:intergenic 45.0%
TGCTAGTGTCAATCCGAACT+TGG - chr7_4:41929921-41929940 Msa1154490:intron 45.0%
GGTCAACAGTTTCTTACTCC+AGG + chr7_4:41930146-41930165 None:intergenic 45.0%
AATGGGAGGGATGCAAATAC+AGG - chr7_4:41930168-41930187 Msa1154490:intron 45.0%
GCTTTGCTAGAAATAGGCAG+TGG - chr7_4:41930254-41930273 Msa1154490:intron 45.0%
!! ATCTTTTGGAGGACCATTGG+AGG - chr7_4:41930287-41930306 Msa1154490:intron 45.0%
CGAAGAGGAAAATCCTCCAA+TGG + chr7_4:41930303-41930322 None:intergenic 45.0%
TAGGGTCTTTGACCACTAGT+AGG - chr7_4:41930373-41930392 Msa1154490:intron 45.0%
AGGGTCTTTGACCACTAGTA+GGG - chr7_4:41930374-41930393 Msa1154490:intron 45.0%
TAAGCTGTGGGAATACCTTG+AGG + chr7_4:41930401-41930420 None:intergenic 45.0%
! TCAAGGTATTCCCACAGCTT+AGG - chr7_4:41930400-41930419 Msa1154490:intron 45.0%
AACCCAAATTCGATTCCTGG+AGG + chr7_4:41930452-41930471 None:intergenic 45.0%
CTCTCCCAATACCATGTTTG+TGG - chr7_4:41930501-41930520 Msa1154490:intron 45.0%
TGCTACATCTTTGTGGGTGT+TGG - chr7_4:41930823-41930842 Msa1154490:intron 45.0%
GCTACATCTTTGTGGGTGTT+GGG - chr7_4:41930824-41930843 Msa1154490:intron 45.0%
CTCCTGATGTGTGTTATGTC+TGG - chr7_4:41930857-41930876 Msa1154490:intron 45.0%
CACCAGACATAACACACATC+AGG + chr7_4:41930862-41930881 None:intergenic 45.0%
AAAAACTGGTCCAAGGACCT+GGG + chr7_4:41930962-41930981 None:intergenic 45.0%
AAAAAACTGGTCCAAGGACC+TGG + chr7_4:41930963-41930982 None:intergenic 45.0%
!!! GCTGGTTTTAATAGGCCAAG+AGG - chr7_4:41930996-41931015 Msa1154490:intron 45.0%
!! GCCAAGAGGCTATGTTTTTG+TGG - chr7_4:41931010-41931029 Msa1154490:intron 45.0%
GCCACAAAAACATAGCCTCT+TGG + chr7_4:41931014-41931033 None:intergenic 45.0%
TTGACTAACCGGTACGTTAG+AGG - chr7_4:41931703-41931722 Msa1154490:CDS 45.0%
GAATGCAAGGGAATGGAATG+GGG - chr7_4:41931753-41931772 Msa1154490:CDS 45.0%
AAACAATGGAGCTCCATTGC+CGG - chr7_4:41932005-41932024 Msa1154490:intron 45.0%
! TAGACTGTAGAGATGGTGGT+TGG + chr7_4:41932058-41932077 None:intergenic 45.0%
!! TGTCGTAAGCCTTTGGAGTT+GGG + chr7_4:41932097-41932116 None:intergenic 45.0%
!! GTATTTTTGATTCACCCCGG+GGG - chr7_4:41932165-41932184 Msa1154490:intron 45.0%
!! TATTTTTGATTCACCCCGGG+GGG - chr7_4:41932166-41932185 Msa1154490:intron 45.0%
AAATGACTTCTTATCCCCCC+GGG + chr7_4:41932183-41932202 None:intergenic 45.0%
CAAATGACTTCTTATCCCCC+CGG + chr7_4:41932184-41932203 None:intergenic 45.0%
! GTTTCTGTCTGGAACTTTCG+TGG - chr7_4:41932414-41932433 Msa1154490:intron 45.0%
GATCAATGGATGGAAGCCAA+TGG - chr7_4:41932555-41932574 Msa1154490:intron 45.0%
ATGTGAGCAACATCTTGACG+GGG - chr7_4:41932726-41932745 Msa1154490:intron 45.0%
AATAAGGAGCTCAGTTGCAG+AGG - chr7_4:41932841-41932860 Msa1154490:intron 45.0%
!! GTGTTTCTTCACTGGCTTCA+TGG - chr7_4:41932978-41932997 Msa1154490:intron 45.0%
CAAAGTCCCCTAAGAATTCC+AGG + chr7_4:41933385-41933404 None:intergenic 45.0%
GGAATTCTTAGGGGACTTTG+TGG - chr7_4:41933385-41933404 Msa1154490:CDS 45.0%
TTGTGGGATATGATGGCAAG+AGG - chr7_4:41933402-41933421 Msa1154490:CDS 45.0%
TGTGGGATATGATGGCAAGA+GGG - chr7_4:41933403-41933422 Msa1154490:CDS 45.0%
!! GGTGGTGGAAGTGAAGAGAA+TGG - chr7_4:41926822-41926841 Msa1154490:three_prime_UTR 50.0%
GCAGCAACAAAGGAACGATG+AGG + chr7_4:41926991-41927010 None:intergenic 50.0%
GCAAGTGGTCAAACGGATCT+TGG + chr7_4:41927727-41927746 None:intergenic 50.0%
CCAAGTGGCATGATAGCAAG+TGG + chr7_4:41927742-41927761 None:intergenic 50.0%
!! CCACTTGCTATCATGCCACT+TGG - chr7_4:41927739-41927758 Msa1154490:intron 50.0%
CTCTTAACACACACCCCTCA+GGG + chr7_4:41927795-41927814 None:intergenic 50.0%
ACTCTTAACACACACCCCTC+AGG + chr7_4:41927796-41927815 None:intergenic 50.0%
GCAGTGCTCACCTTACAAAC+CGG - chr7_4:41927862-41927881 Msa1154490:CDS 50.0%
GATTGAGTGCGTGCATTCTG+TGG - chr7_4:41928695-41928714 Msa1154490:intron 50.0%
! GGTGATGGCTTAGTAGGTCA+TGG - chr7_4:41929257-41929276 Msa1154490:intron 50.0%
CCAAGTCTTTGGTCTCCAAC+TGG + chr7_4:41929376-41929395 None:intergenic 50.0%
CCAGTTGGAGACCAAAGACT+TGG - chr7_4:41929373-41929392 Msa1154490:intron 50.0%
TGGGTGAAATAGGCTAAGGG+CGG - chr7_4:41929393-41929412 Msa1154490:intron 50.0%
ACCCCCGAAACCTGAGATAA+AGG + chr7_4:41929744-41929763 None:intergenic 50.0%
TTTATCTCAGGTTTCGGGGG+TGG - chr7_4:41929743-41929762 Msa1154490:intron 50.0%
GTCCATTAGAGCAGCCATGA+TGG - chr7_4:41929813-41929832 Msa1154490:intron 50.0%
GGGTCTTTGACCACTAGTAG+GGG - chr7_4:41930375-41930394 Msa1154490:intron 50.0%
! AGTCTGATAGCGAGCCCAAA+GGG + chr7_4:41930426-41930445 None:intergenic 50.0%
! TAGTCTGATAGCGAGCCCAA+AGG + chr7_4:41930427-41930446 None:intergenic 50.0%
CGCTATCAGACTAATCCTCC+AGG - chr7_4:41930434-41930453 Msa1154490:intron 50.0%
TGGTATGGAGACAGCCTAGA+AGG + chr7_4:41930690-41930709 None:intergenic 50.0%
AAAACTGGTCCAAGGACCTG+GGG + chr7_4:41930961-41930980 None:intergenic 50.0%
GAAACGGTGGTGTTCAGTGA+AGG + chr7_4:41931924-41931943 None:intergenic 50.0%
!! GAGATGGTGGTTGGTAGTGA+TGG + chr7_4:41932049-41932068 None:intergenic 50.0%
!! AAGCCTTTGGAGTTGGGGTA+GGG + chr7_4:41932091-41932110 None:intergenic 50.0%
!! TAAGCCTTTGGAGTTGGGGT+AGG + chr7_4:41932092-41932111 None:intergenic 50.0%
!! GTCGTAAGCCTTTGGAGTTG+GGG + chr7_4:41932096-41932115 None:intergenic 50.0%
!! GTGTCGTAAGCCTTTGGAGT+TGG + chr7_4:41932098-41932117 None:intergenic 50.0%
AATGACTTCTTATCCCCCCG+GGG + chr7_4:41932182-41932201 None:intergenic 50.0%
!! GGTTCGAAGTTCTGAGCTGA+TGG - chr7_4:41932305-41932324 Msa1154490:intron 50.0%
!! TCGAAGTTCTGAGCTGATGG+AGG - chr7_4:41932308-41932327 Msa1154490:intron 50.0%
TGCAGTCTGGATGCCATAAC+AGG + chr7_4:41932467-41932486 None:intergenic 50.0%
CACATTGATAGAACCGGCTG+TGG + chr7_4:41932711-41932730 None:intergenic 50.0%
CATCTTGACGGGGAAATGTG+TGG - chr7_4:41932736-41932755 Msa1154490:intron 50.0%
TGCTGCAAATTGCATCGCCA+AGG - chr7_4:41932769-41932788 Msa1154490:intron 50.0%
TGCAAATTGCATCGCCAAGG+TGG - chr7_4:41932772-41932791 Msa1154490:intron 50.0%
ACTACTGCAATCGTCCACCT+TGG + chr7_4:41932789-41932808 None:intergenic 50.0%
GACCGGAACGAGATCTATAC+TGG - chr7_4:41932899-41932918 Msa1154490:intron 50.0%
!! TTCACTGGCTTCATGGACCA+AGG - chr7_4:41932985-41933004 Msa1154490:intron 50.0%
AGAGAGACATAGAGGGTGGA+AGG + chr7_4:41933113-41933132 None:intergenic 50.0%
AGAGAGAGAGACATAGAGGG+TGG + chr7_4:41933117-41933136 None:intergenic 50.0%
GGGGACTTTGTGGGATATGA+TGG - chr7_4:41933395-41933414 Msa1154490:CDS 50.0%
GTGGGATATGATGGCAAGAG+GGG - chr7_4:41933404-41933423 Msa1154490:CDS 50.0%
TGGCAAGAGGGGAAACTACA+TGG - chr7_4:41933415-41933434 Msa1154490:CDS 50.0%
GGCAAGAGGGGAAACTACAT+GGG - chr7_4:41933416-41933435 Msa1154490:CDS 50.0%
!! GGCGTGGAGTTTGGTCTTGT+CGG - chr7_4:41926854-41926873 Msa1154490:three_prime_UTR 55.0%
CGGCGCATAGTAGCAACCAA+AGG - chr7_4:41926874-41926893 Msa1154490:three_prime_UTR 55.0%
! CACGCTGCAGGTGTCTGTTT+TGG - chr7_4:41927764-41927783 Msa1154490:intron 55.0%
!!! TCTGTTTTGGCCTGACCCTG+AGG - chr7_4:41927777-41927796 Msa1154490:intron 55.0%
!!! CTGTTTTGGCCTGACCCTGA+GGG - chr7_4:41927778-41927797 Msa1154490:intron 55.0%
!!! TGTTTTGGCCTGACCCTGAG+GGG - chr7_4:41927779-41927798 Msa1154490:intron 55.0%
GGGTGAAATAGGCTAAGGGC+GGG - chr7_4:41929394-41929413 Msa1154490:intron 55.0%
GGTGAAATAGGCTAAGGGCG+GGG - chr7_4:41929395-41929414 Msa1154490:intron 55.0%
AAATAGGCTAAGGGCGGGGA+TGG - chr7_4:41929399-41929418 Msa1154490:intron 55.0%
AGGGCGGGGATGGCTATATT+TGG - chr7_4:41929409-41929428 Msa1154490:intron 55.0%
TACCTTGAGGCCCCTACTAG+TGG + chr7_4:41930388-41930407 None:intergenic 55.0%
TTCCCACAGCTTAGGCCCTT+TGG - chr7_4:41930408-41930427 Msa1154490:intron 55.0%
TCCCACAGCTTAGGCCCTTT+GGG - chr7_4:41930409-41930428 Msa1154490:intron 55.0%
GAGAATCTCGAGTTTGCCCC+AGG - chr7_4:41930942-41930961 Msa1154490:intron 55.0%
TGCAAGGGAATGGAATGGGG+TGG - chr7_4:41931756-41931775 Msa1154490:CDS 55.0%
GCAAGGGAATGGAATGGGGT+GGG - chr7_4:41931757-41931776 Msa1154490:CDS 55.0%
CAAGGGAATGGAATGGGGTG+GGG - chr7_4:41931758-41931777 Msa1154490:CDS 55.0%
!! AGCCTTTGGAGTTGGGGTAG+GGG + chr7_4:41932090-41932109 None:intergenic 55.0%
! AGGTGGGTGTCGTAAGCCTT+TGG + chr7_4:41932104-41932123 None:intergenic 55.0%
TTGGTGAGGGCAGAGAAGGT+GGG + chr7_4:41932120-41932139 None:intergenic 55.0%
! TGTGTTGGTGAGGGCAGAGA+AGG + chr7_4:41932124-41932143 None:intergenic 55.0%
GAGCTCAGTTGCAGAGGCTT+TGG - chr7_4:41932847-41932866 Msa1154490:intron 55.0%
! CTCAGTTGCAGAGGCTTTGG+AGG - chr7_4:41932850-41932869 Msa1154490:intron 55.0%
TCTACTGCCGAAACTGCCTC+AGG - chr7_4:41933069-41933088 Msa1154490:intron 55.0%
GACATAGAGGGTGGAAGGAG+AGG + chr7_4:41933108-41933127 None:intergenic 55.0%
AACACACACCCCTCAGGGTC+AGG + chr7_4:41927790-41927809 None:intergenic 60.0%
GGCTGCGGATGACTTCGTCA+GGG + chr7_4:41928587-41928606 None:intergenic 60.0%
AGGCTGCGGATGACTTCGTC+AGG + chr7_4:41928588-41928607 None:intergenic 60.0%
AGGAAAACCGGCATCCGGCT+TGG + chr7_4:41928805-41928824 None:intergenic 60.0%
TGAGGGGGCGATGCAGAGTA+TGG + chr7_4:41929197-41929216 None:intergenic 60.0%
GACCACTAGTAGGGGCCTCA+AGG - chr7_4:41930383-41930402 Msa1154490:intron 60.0%
GCCCAAAGGGCCTAAGCTGT+GGG + chr7_4:41930413-41930432 None:intergenic 60.0%
AGCCCAAAGGGCCTAAGCTG+TGG + chr7_4:41930414-41930433 None:intergenic 60.0%
TCGAGTTTGCCCCAGGTCCT+TGG - chr7_4:41930949-41930968 Msa1154490:intron 60.0%
TGGGGTGGGGTTTCGTTGCT+TGG - chr7_4:41931771-41931790 Msa1154490:CDS 60.0%
!! CTTTGGAGTTGGGGTAGGGG+AGG + chr7_4:41932087-41932106 None:intergenic 60.0%
CTCCCCTACCCCAACTCCAA+AGG - chr7_4:41932085-41932104 Msa1154490:intron 60.0%
! GTTGGTGAGGGCAGAGAAGG+TGG + chr7_4:41932121-41932140 None:intergenic 60.0%
TGCCGAAACTGCCTCAGGAC+CGG - chr7_4:41933074-41933093 Msa1154490:intron 60.0%
ACCCGGTCCTGAGGCAGTTT+CGG + chr7_4:41933079-41933098 None:intergenic 60.0%
GGAAGGAGAGGATCCAGACC+CGG + chr7_4:41933096-41933115 None:intergenic 60.0%
! TGCCACTTGGGTCACGCTGC+AGG - chr7_4:41927752-41927771 Msa1154490:intron 65.0%
CACCTGCAGCGTGACCCAAG+TGG + chr7_4:41927757-41927776 None:intergenic 65.0%
AAGAGGGCCAAGCCGGATGC+CGG - chr7_4:41928795-41928814 Msa1154490:intron 65.0%
!! TCGTTGGTGGTGGCCGGCAA+TGG + chr7_4:41932021-41932040 None:intergenic 65.0%
ATTGCCGGCCACCACCAACG+AGG - chr7_4:41932020-41932039 Msa1154490:intron 65.0%
TTGCCGGCCACCACCAACGA+GGG - chr7_4:41932021-41932040 Msa1154490:intron 65.0%
! AGTGATGGCGCCCTCGTTGG+TGG + chr7_4:41932034-41932053 None:intergenic 65.0%
! GGTAGTGATGGCGCCCTCGT+TGG + chr7_4:41932037-41932056 None:intergenic 65.0%
GCCGAAACTGCCTCAGGACC+GGG - chr7_4:41933075-41933094 Msa1154490:intron 65.0%
AACTGCCTCAGGACCGGGTC+TGG - chr7_4:41933080-41933099 Msa1154490:intron 65.0%
AGGATCCAGACCCGGTCCTG+AGG + chr7_4:41933088-41933107 None:intergenic 65.0%
! GATGGCGCCCTCGTTGGTGG+TGG + chr7_4:41932031-41932050 None:intergenic 70.0%
!! GCGCCCTCGTTGGTGGTGGC+CGG + chr7_4:41932027-41932046 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 41926785 41933573 41926785 ID=Msa1154490;Name=Msa1154490
chr7_4 mRNA 41926785 41933573 41926785 ID=Msa1154490-mRNA-1;Parent=Msa1154490;Name=Msa1154490-mRNA-1;_AED=0.05;_eAED=0.06;_QI=56|1|0.83|1|0.8|1|6|615|504
chr7_4 exon 41926785 41927644 41926785 ID=Msa1154490-mRNA-1:exon:10268;Parent=Msa1154490-mRNA-1
chr7_4 exon 41927782 41928052 41927782 ID=Msa1154490-mRNA-1:exon:10267;Parent=Msa1154490-mRNA-1
chr7_4 exon 41928860 41929052 41928860 ID=Msa1154490-mRNA-1:exon:10266;Parent=Msa1154490-mRNA-1
chr7_4 exon 41931268 41931348 41931268 ID=Msa1154490-mRNA-1:exon:10265;Parent=Msa1154490-mRNA-1
chr7_4 exon 41931445 41931808 41931445 ID=Msa1154490-mRNA-1:exon:10264;Parent=Msa1154490-mRNA-1
chr7_4 exon 41933157 41933573 41933157 ID=Msa1154490-mRNA-1:exon:10263;Parent=Msa1154490-mRNA-1
chr7_4 five_prime_UTR 41933518 41933573 41933518 ID=Msa1154490-mRNA-1:five_prime_utr;Parent=Msa1154490-mRNA-1
chr7_4 CDS 41933157 41933517 41933157 ID=Msa1154490-mRNA-1:cds;Parent=Msa1154490-mRNA-1
chr7_4 CDS 41931445 41931808 41931445 ID=Msa1154490-mRNA-1:cds;Parent=Msa1154490-mRNA-1
chr7_4 CDS 41931268 41931348 41931268 ID=Msa1154490-mRNA-1:cds;Parent=Msa1154490-mRNA-1
chr7_4 CDS 41928860 41929052 41928860 ID=Msa1154490-mRNA-1:cds;Parent=Msa1154490-mRNA-1
chr7_4 CDS 41927782 41928052 41927782 ID=Msa1154490-mRNA-1:cds;Parent=Msa1154490-mRNA-1
chr7_4 CDS 41927400 41927644 41927400 ID=Msa1154490-mRNA-1:cds;Parent=Msa1154490-mRNA-1
chr7_4 three_prime_UTR 41926785 41927399 41926785 ID=Msa1154490-mRNA-1:three_prime_utr;Parent=Msa1154490-mRNA-1
Gene Sequence

>Msa1154490

ATGGAAGAAAGAAGGCGTGGAGTTTGGTCTTGTCGGCGCATAGTAGCAACCAAAGGTGAATCCTCAAACAATGGTTCCAAACCAAACATCAAGATCAACAACAAAAACATCATCAAGAAGCTTCAAACACGCGAGATTTCTCCTAAACCTCATCGTTCCTTTGTTGCTGCTACTTCACCACATAGATTCCAGAACATGCGTTTGACTCATCAATTTGATACTCATGATCCTAAACATCATTCTTCTCCTTCACCCTTTTTGCCTTTTTTGATGAAAAGAACTAAGGTTGTTGAGATCGTTGCTGCTAAGAATATTGTCTTTGCTCTTGCTCATTCTGGTCTTTGTGCTGCTTTTAGTAGAGAAACAAATGAGAGGATTTGCTTTTTGAATATCTGCCCTGACGAAGTCATCCGCAGCCTCTTCTACAACAAGAACAATGACTCACTTATTACGGTGTCTGTTTATGCTTCTGAGAATTTCAGTTCTTTGAAGTGCAGATCTACAAGGATTGAGTGCGTGCATTCTGTGGTTGTGCATTCAAATTTTCCTTTCTTGTCTACAATGTATGTTACTAACATATTCACTATTTTTGTTCCTAGATACATAAAGAGGGCCAAGCCGGATGCCGGTTTTCCTCTTTTCCAGTCCGAGTCTTTAAAATGGCCTGGATTTGTGGAATTTGATGATGTTAATGCAAAGGTCCTAACATACTCTGCGCAAGATAGTATATACAAGGTCTTCGATCTTAAAAACTACGTTTTGCTATACTCGATTTCAGATAGGAATGTTCAAGAGATAAAAATCAGTCCTGGCATCATGTTATTAATATTCAATAGAGCAAGTGGTCATATTCCACTGAAGATTATATCGATTGAGGATGGTACAGTTCTCAAAGCATTCAATCATCTACTCCATCGGAATAAGAAAGTGGACTTCATAGAGCAATTCAATGAAAAGCTTCTAGTCAAGCAGGAAAATGAGAACCTTCAAATTCTTGATGTTCGAAGTTCTGAGCTGATGGAGGTAAGCAGAACTGAGTTCATGACTCCTTCAGCATTTATCTTTCTGTACGAAAATCAGTTATTCCTTACTTTCAGAAATCGAACAGTTTCTGTCTGGAACTTTCGTGGCGAACTTGTCACATCATTTGAGGATCACCTGTTATGGCATCCAGACTGCAACACAAACAACATATACATAACAAGTGATCAGGACCTGATTATCTCGTACTGCAAAGCTGAATCTGAAGATCAATGGATGGAAGCCAATGCCGGTTCTATCAATGTGAGCAACATCTTGACGGGGAAATGTGTGGCGAAAATTAATGCTGCAAATTGCATCGCCAAGGTGGACGATTGCAGTAGTACTTGCAGCTGCAAACAAACTGATTCATCTCAAATAAGGAGCTCAGTTGCAGAGGCTTTGGAGGACATAACTGCCCTCTTTTATGATGAAGACCGGAACGAGATCTATACTGGTAATAGACATGGTTATGTTCATGTATGGTCCAACTAA

Protein sequence

>Msa1154490

MEERRRGVWSCRRIVATKGESSNNGSKPNIKINNKNIIKKLQTREISPKPHRSFVAATSPHRFQNMRLTHQFDTHDPKHHSSPSPFLPFLMKRTKVVEIVAAKNIVFALAHSGLCAAFSRETNERICFLNICPDEVIRSLFYNKNNDSLITVSVYASENFSSLKCRSTRIECVHSVVVHSNFPFLSTMYVTNIFTIFVPRYIKRAKPDAGFPLFQSESLKWPGFVEFDDVNAKVLTYSAQDSIYKVFDLKNYVLLYSISDRNVQEIKISPGIMLLIFNRASGHIPLKIISIEDGTVLKAFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRSSELMEVSRTEFMTPSAFIFLYENQLFLTFRNRTVSVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAESEDQWMEANAGSINVSNILTGKCVAKINAANCIAKVDDCSSTCSCKQTDSSQIRSSVAEALEDITALFYDEDRNEIYTGNRHGYVHVWSN*