Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061600 | XP_013448973.1 | 97.484 | 318 | 8 | 0 | 1 | 318 | 37 | 354 | 0.0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061600 | sp|Q0PGJ6|AKRC9_ARATH | 66.134 | 313 | 105 | 1 | 7 | 318 | 3 | 315 | 6.94e-155 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061600 | A0A072UAY8 | 97.484 | 318 | 8 | 0 | 1 | 318 | 37 | 354 | 0.0 | 649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0996080 | Msa1061600 | 0.811031 | 8.579832e-51 | -8.615850e-47 |
| Msa0996090 | Msa1061600 | 0.806178 | 9.333646e-50 | -8.615850e-47 |
| Msa1044340 | Msa1061600 | 0.809048 | 2.293314e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061600 | MtrunA17_Chr7g0239701 | 97.484 | 318 | 8 | 0 | 1 | 318 | 1 | 318 | 0.0 | 648 |
| Msa1061600 | MtrunA17_Chr8g0368921 | 62.342 | 316 | 110 | 4 | 10 | 318 | 6 | 319 | 1.31e-142 | 405 |
| Msa1061600 | MtrunA17_Chr8g0368931 | 63.578 | 313 | 113 | 1 | 7 | 318 | 3 | 315 | 6.62e-142 | 403 |
| Msa1061600 | MtrunA17_Chr4g0009531 | 60.841 | 309 | 120 | 1 | 10 | 318 | 6 | 313 | 6.07e-131 | 375 |
| Msa1061600 | MtrunA17_Chr4g0009581 | 59.477 | 306 | 114 | 2 | 12 | 317 | 9 | 304 | 2.86e-120 | 348 |
| Msa1061600 | MtrunA17_Chr4g0018921 | 41.720 | 314 | 176 | 4 | 10 | 318 | 4 | 315 | 4.71e-83 | 253 |
| Msa1061600 | MtrunA17_Chr4g0009621 | 57.563 | 238 | 91 | 3 | 80 | 317 | 1 | 228 | 1.31e-80 | 244 |
| Msa1061600 | MtrunA17_Chr6g0480021 | 42.765 | 311 | 152 | 6 | 14 | 317 | 11 | 302 | 9.97e-78 | 239 |
| Msa1061600 | MtrunA17_Chr1g0173621 | 40.777 | 309 | 163 | 6 | 18 | 317 | 18 | 315 | 3.02e-76 | 236 |
| Msa1061600 | MtrunA17_Chr6g0480011 | 41.214 | 313 | 175 | 5 | 14 | 318 | 11 | 322 | 1.09e-75 | 235 |
| Msa1061600 | MtrunA17_Chr3g0121001 | 41.311 | 305 | 164 | 5 | 19 | 317 | 20 | 315 | 9.80e-74 | 229 |
| Msa1061600 | MtrunA17_Chr7g0243551 | 44.840 | 281 | 151 | 3 | 12 | 291 | 15 | 292 | 9.03e-72 | 224 |
| Msa1061600 | MtrunA17_Chr6g0479981 | 38.217 | 314 | 175 | 7 | 14 | 315 | 11 | 317 | 2.72e-69 | 218 |
| Msa1061600 | MtrunA17_Chr4g0036051 | 41.924 | 291 | 154 | 4 | 14 | 291 | 5 | 293 | 4.00e-67 | 212 |
| Msa1061600 | MtrunA17_Chr5g0447941 | 41.639 | 305 | 158 | 5 | 19 | 315 | 19 | 311 | 1.20e-66 | 211 |
| Msa1061600 | MtrunA17_Chr5g0447951 | 42.456 | 285 | 154 | 3 | 19 | 296 | 19 | 300 | 1.87e-66 | 211 |
| Msa1061600 | MtrunA17_Chr5g0447961 | 42.456 | 285 | 154 | 3 | 19 | 296 | 19 | 300 | 1.87e-66 | 211 |
| Msa1061600 | MtrunA17_Chr4g0036261 | 47.568 | 185 | 95 | 2 | 135 | 318 | 1 | 184 | 1.76e-52 | 171 |
| Msa1061600 | MtrunA17_Chr4g0036301 | 46.512 | 172 | 90 | 2 | 147 | 317 | 1 | 171 | 2.95e-43 | 146 |
| Msa1061600 | MtrunA17_Chr4g0036321 | 46.512 | 172 | 90 | 2 | 147 | 317 | 1 | 171 | 1.95e-41 | 142 |
| Msa1061600 | MtrunA17_Chr6g0479811 | 38.053 | 113 | 69 | 1 | 187 | 298 | 1 | 113 | 2.29e-20 | 84.7 |
| Msa1061600 | MtrunA17_Chr6g0479791 | 48.276 | 87 | 42 | 2 | 233 | 317 | 18 | 103 | 5.77e-17 | 75.5 |
| Msa1061600 | MtrunA17_Chr4g0036291 | 40.952 | 105 | 56 | 3 | 6 | 105 | 3 | 106 | 8.10e-17 | 75.1 |
| Msa1061600 | MtrunA17_Chr4g0036311 | 40.625 | 96 | 53 | 3 | 14 | 105 | 11 | 106 | 3.16e-15 | 70.9 |
| Msa1061600 | MtrunA17_Chr4g0036251 | 40.860 | 93 | 51 | 2 | 14 | 105 | 11 | 100 | 4.54e-15 | 70.1 |
| Msa1061600 | MtrunA17_Chr3g0095421 | 25.153 | 326 | 168 | 14 | 19 | 288 | 46 | 351 | 1.23e-13 | 70.9 |
| Msa1061600 | MtrunA17_Chr4g0009611 | 57.447 | 47 | 17 | 1 | 1 | 47 | 1 | 44 | 9.47e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061600 | AT2G37770.2 | 66.134 | 313 | 105 | 1 | 7 | 318 | 3 | 315 | 7.05e-156 | 439 |
| Msa1061600 | AT2G37790.1 | 65.161 | 310 | 106 | 2 | 10 | 318 | 6 | 314 | 4.99e-148 | 419 |
| Msa1061600 | AT3G53880.1 | 63.961 | 308 | 110 | 1 | 12 | 318 | 8 | 315 | 1.08e-141 | 403 |
| Msa1061600 | AT2G37760.2 | 58.065 | 310 | 125 | 2 | 10 | 318 | 6 | 311 | 4.64e-130 | 373 |
| Msa1061600 | AT2G37760.1 | 58.065 | 310 | 125 | 2 | 10 | 318 | 6 | 311 | 4.64e-130 | 373 |
| Msa1061600 | AT3G53880.2 | 63.929 | 280 | 100 | 1 | 12 | 290 | 8 | 287 | 1.43e-126 | 364 |
| Msa1061600 | AT2G37760.4 | 59.091 | 286 | 112 | 2 | 10 | 294 | 6 | 287 | 3.46e-121 | 350 |
| Msa1061600 | AT2G37760.3 | 59.091 | 286 | 112 | 2 | 10 | 294 | 6 | 287 | 3.46e-121 | 350 |
| Msa1061600 | AT2G37760.5 | 59.507 | 284 | 110 | 2 | 10 | 292 | 6 | 285 | 5.66e-121 | 349 |
| Msa1061600 | AT2G37760.6 | 58.462 | 260 | 107 | 1 | 60 | 318 | 6 | 265 | 1.35e-107 | 314 |
| Msa1061600 | AT2G37760.7 | 58.462 | 260 | 107 | 1 | 60 | 318 | 6 | 265 | 1.35e-107 | 314 |
| Msa1061600 | AT2G37770.1 | 64.356 | 202 | 72 | 0 | 7 | 208 | 3 | 204 | 3.03e-93 | 278 |
| Msa1061600 | AT5G01670.1 | 42.765 | 311 | 172 | 5 | 10 | 317 | 14 | 321 | 2.58e-86 | 262 |
| Msa1061600 | AT5G62420.1 | 43.590 | 312 | 166 | 5 | 14 | 318 | 8 | 316 | 8.37e-85 | 258 |
| Msa1061600 | AT5G01670.2 | 39.349 | 338 | 172 | 6 | 10 | 317 | 14 | 348 | 1.93e-80 | 248 |
| Msa1061600 | AT1G59960.1 | 41.368 | 307 | 171 | 6 | 20 | 318 | 21 | 326 | 4.46e-75 | 234 |
| Msa1061600 | AT2G21260.1 | 40.714 | 280 | 151 | 4 | 14 | 280 | 5 | 282 | 8.10e-72 | 225 |
| Msa1061600 | AT2G21250.1 | 40.925 | 281 | 149 | 5 | 14 | 280 | 5 | 282 | 1.57e-71 | 224 |
| Msa1061600 | AT1G59950.1 | 43.974 | 307 | 163 | 6 | 20 | 318 | 15 | 320 | 1.37e-70 | 222 |
| Msa1061600 | AT2G21250.2 | 42.381 | 210 | 110 | 2 | 14 | 214 | 5 | 212 | 4.85e-55 | 179 |
| Msa1061600 | AT2G21260.2 | 36.842 | 209 | 117 | 4 | 85 | 280 | 8 | 214 | 3.18e-41 | 144 |
| Msa1061600 | AT1G06690.1 | 25.478 | 314 | 160 | 12 | 19 | 277 | 57 | 351 | 6.32e-16 | 78.2 |
| Msa1061600 | AT5G53580.1 | 26.633 | 199 | 109 | 6 | 103 | 275 | 149 | 336 | 3.14e-11 | 63.9 |
Find 98 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAGCACAAGTGGCTTTA+AGG | 0.166939 | 7_2:+51467207 | Msa1061600:CDS |
| TTGGCATACTTGAGCATATA+TGG | 0.205643 | 7_2:-51467725 | None:intergenic |
| TCAGCAATTTCAATCAAAAT+TGG | 0.229308 | 7_2:-51467170 | None:intergenic |
| CTAGATTCGTTAACACTCTT+TGG | 0.230830 | 7_2:-51467260 | None:intergenic |
| ATGTTTACGGTAGTGTATTT+TGG | 0.276048 | 7_2:-51467744 | None:intergenic |
| TGATTACATTGATTTATATC+TGG | 0.304902 | 7_2:+51466185 | Msa1061600:CDS |
| TGTATGGACTACAACTTTCA+TGG | 0.321770 | 7_2:-51467501 | None:intergenic |
| AGCAAAGGGTTCGGAGTAAA+AGG | 0.330661 | 7_2:-51464609 | None:intergenic |
| CTCTAGGTTCTCCTGGATCA+TGG | 0.351002 | 7_2:+51467123 | Msa1061600:CDS |
| AGAACCTTAGCTTATTTGAT+TGG | 0.357660 | 7_2:+51467291 | Msa1061600:CDS |
| CATAATTTGTGCAATTCTAC+TGG | 0.384638 | 7_2:+51466547 | Msa1061600:CDS |
| CGACTTATGATTTCGTTATG+AGG | 0.389838 | 7_2:+51467666 | Msa1061600:three_prime_UTR |
| CATGTTCCAAGACCAATTGA+TGG | 0.393008 | 7_2:-51464887 | None:intergenic |
| TTGCAGGCATATTCTCCTCT+AGG | 0.406304 | 7_2:+51467107 | Msa1061600:intron |
| GCTTACAGGAAGCATGTTTA+CGG | 0.408586 | 7_2:-51467757 | None:intergenic |
| TATTCTCCTCTAGGTTCTCC+TGG | 0.409021 | 7_2:+51467116 | Msa1061600:CDS |
| CACCTTAAAGCCACTTGTGC+TGG | 0.410276 | 7_2:-51467209 | None:intergenic |
| CAAAGAGTGTTAACGAATCT+AGG | 0.412380 | 7_2:+51467261 | Msa1061600:CDS |
| TATGTTCATTTCTCTTTCTG+TGG | 0.414383 | 7_2:+51467595 | Msa1061600:three_prime_UTR |
| ACAAAAGTCTTGAAGATTTG+TGG | 0.422843 | 7_2:+51467521 | Msa1061600:CDS |
| CCATGTCTCTGAAAGACATA+AGG | 0.430726 | 7_2:-51466368 | None:intergenic |
| AAAGCTTCTCCTGGTGTTGT+TGG | 0.431625 | 7_2:+51464911 | Msa1061600:CDS |
| ATGCAGCAAAGGCTACTTAG+AGG | 0.433401 | 7_2:+51467466 | Msa1061600:intron |
| CAAAAGTCTTGAAGATTTGT+GGG | 0.435763 | 7_2:+51467522 | Msa1061600:CDS |
| TGGCATACTTGAGCATATAT+GGG | 0.438914 | 7_2:-51467724 | None:intergenic |
| AGTGCCTTTGAGACATCTTC+AGG | 0.441004 | 7_2:-51466135 | None:intergenic |
| AAGTTGAATGCCATCCTGTT+TGG | 0.441433 | 7_2:+51466509 | Msa1061600:CDS |
| CATAAGGGAGCCATGACCTC+AGG | 0.441637 | 7_2:-51466352 | None:intergenic |
| AAGATACCATCAATTGGTCT+TGG | 0.445199 | 7_2:+51464881 | Msa1061600:CDS |
| GGGTTGGGACCCTGAGGTCA+TGG | 0.448995 | 7_2:+51466342 | Msa1061600:CDS |
| TATAGCAATTTGTTTCAAGA+AGG | 0.454228 | 7_2:+51464711 | Msa1061600:five_prime_UTR |
| AGAGCTGGTTGTTGCCAAAC+AGG | 0.455250 | 7_2:-51466523 | None:intergenic |
| ATTATTTGTCTCAGATGCAT+TGG | 0.457650 | 7_2:+51466293 | Msa1061600:intron |
| AACTATCTTAAATGAAATGA+AGG | 0.457915 | 7_2:-51467689 | None:intergenic |
| ATGTTCATTTCTCTTTCTGT+GGG | 0.458301 | 7_2:+51467596 | Msa1061600:three_prime_UTR |
| AAAATCAGGATCAAGGGGTT+GGG | 0.460672 | 7_2:+51466327 | Msa1061600:CDS |
| TCTCCCTTTACCCATGATCC+AGG | 0.468010 | 7_2:-51467134 | None:intergenic |
| CAAAATCAGGATCAAGGGGT+TGG | 0.470416 | 7_2:+51466326 | Msa1061600:CDS |
| CCTTATGTCTTTCAGAGACA+TGG | 0.473236 | 7_2:+51466368 | Msa1061600:CDS |
| CATCAATTGGTCTTGGAACA+TGG | 0.476638 | 7_2:+51464888 | Msa1061600:CDS |
| AAACAGGATGGCATTCAACT+TGG | 0.480824 | 7_2:-51466507 | None:intergenic |
| TCTCCTGGATCATGGGTAAA+GGG | 0.485161 | 7_2:+51467131 | Msa1061600:CDS |
| TCTAGGTTCTCCTGGATCAT+GGG | 0.486946 | 7_2:+51467124 | Msa1061600:CDS |
| TTAGGACAAAATCAGGATCA+AGG | 0.487330 | 7_2:+51466320 | Msa1061600:CDS |
| ATGGAAGGTTTATTCGCCTC+AGG | 0.489506 | 7_2:+51466397 | Msa1061600:CDS |
| TTCTCCTGGATCATGGGTAA+AGG | 0.495173 | 7_2:+51467130 | Msa1061600:CDS |
| TGCTGTTGTTGCTGCAGTCA+AGG | 0.499120 | 7_2:+51464937 | Msa1061600:CDS |
| TTGCACAAATTATGAAGAGC+TGG | 0.505436 | 7_2:-51466538 | None:intergenic |
| TCAGGTCAAGCACGTGCGAT+TGG | 0.507888 | 7_2:+51466415 | Msa1061600:CDS |
| GGTGCAAAGATACCATCAAT+TGG | 0.517228 | 7_2:+51464875 | Msa1061600:CDS |
| ACAGCATCACCAACAACACC+AGG | 0.517261 | 7_2:-51464920 | None:intergenic |
| AATCAATGTAATCAAGCTGC+AGG | 0.517364 | 7_2:-51466176 | None:intergenic |
| GTGACATAAAGCAAAGGGTT+CGG | 0.518027 | 7_2:-51464618 | None:intergenic |
| CATGTCTCTGAAAGACATAA+GGG | 0.519066 | 7_2:-51466367 | None:intergenic |
| TAGGACAAAATCAGGATCAA+GGG | 0.519583 | 7_2:+51466321 | Msa1061600:CDS |
| TAAATGTGACATAAAGCAAA+GGG | 0.521591 | 7_2:-51464623 | None:intergenic |
| TCAACTTGGTTAACTGCTGG+TGG | 0.521663 | 7_2:-51466493 | None:intergenic |
| ATAGCAATTTGTTTCAAGAA+GGG | 0.522428 | 7_2:+51464712 | Msa1061600:five_prime_UTR |
| AGCACAAGTGGCTTTAAGGT+GGG | 0.523912 | 7_2:+51467211 | Msa1061600:CDS |
| TGGGATGGAGAAATATGAAA+TGG | 0.529212 | 7_2:+51467541 | Msa1061600:exon |
| AGTCTTGAAGATTTGTGGGA+TGG | 0.532587 | 7_2:+51467526 | Msa1061600:CDS |
| CATTCAACTTGGTTAACTGC+TGG | 0.536083 | 7_2:-51466496 | None:intergenic |
| GGAACATGGAAAGCTTCTCC+TGG | 0.543292 | 7_2:+51464902 | Msa1061600:CDS |
| GGCATACTTGAGCATATATG+GGG | 0.551808 | 7_2:-51467723 | None:intergenic |
| TGCAGCAAAGGCTACTTAGA+GGG | 0.557647 | 7_2:+51467467 | Msa1061600:intron |
| TACACCAATCAAATAAGCTA+AGG | 0.557967 | 7_2:-51467295 | None:intergenic |
| ACATGCTTCCTGTAAGCCCC+TGG | 0.558996 | 7_2:+51467763 | Msa1061600:three_prime_UTR |
| CAGCACAAGTGGCTTTAAGG+TGG | 0.559566 | 7_2:+51467210 | Msa1061600:CDS |
| TGAAGATGTCTCAAAGGCAC+TGG | 0.560195 | 7_2:+51466137 | Msa1061600:CDS |
| TAACAAGTCTCCAGCACAAG+TGG | 0.568254 | 7_2:+51467199 | Msa1061600:CDS |
| GGTAAAGGGAGAAATCTTGA+AGG | 0.570933 | 7_2:+51467145 | Msa1061600:CDS |
| CAGACATATCGATTGTGCTC+GGG | 0.572810 | 7_2:+51465382 | Msa1061600:CDS |
| GTATTTGCTGCAGGTAGGCG+AGG | 0.575208 | 7_2:+51465523 | Msa1061600:intron |
| TTCTACTGGTGTTCATCTCA+CGG | 0.577516 | 7_2:+51466561 | Msa1061600:CDS |
| ATGTCTCAAAGGCACTGGCT+AGG | 0.580490 | 7_2:+51466142 | Msa1061600:CDS |
| GAGACATGGAATGCGATGGA+AGG | 0.584641 | 7_2:+51466382 | Msa1061600:CDS |
| CTGGTTGTTGCCAAACAGGA+TGG | 0.587510 | 7_2:-51466519 | None:intergenic |
| AGGACAAAATCAGGATCAAG+GGG | 0.588889 | 7_2:+51466322 | Msa1061600:CDS |
| AAAATTCTCACAGATTCACC+AGG | 0.593882 | 7_2:+51467337 | Msa1061600:CDS |
| ATAAATGTGACATAAAGCAA+AGG | 0.597141 | 7_2:-51464624 | None:intergenic |
| ACAGACATATCGATTGTGCT+CGG | 0.599008 | 7_2:+51465381 | Msa1061600:CDS |
| TTCAGAGACATGGAATGCGA+TGG | 0.599803 | 7_2:+51466378 | Msa1061600:CDS |
| GCACAAGTGGCTTTAAGGTG+GGG | 0.600823 | 7_2:+51467212 | Msa1061600:CDS |
| TGCACCTGAAGATGTCTCAA+AGG | 0.606004 | 7_2:+51466131 | Msa1061600:CDS |
| AAGAAGCTTCAAGACTTACT+CGG | 0.610395 | 7_2:+51466457 | Msa1061600:CDS |
| ATAAGGGAGCCATGACCTCA+GGG | 0.619652 | 7_2:-51466351 | None:intergenic |
| TGTTCATCACATCAAAGCTG+TGG | 0.632263 | 7_2:+51465591 | Msa1061600:CDS |
| ATCAAGGGGTTGGGACCCTG+AGG | 0.640244 | 7_2:+51466336 | Msa1061600:CDS |
| AATCGCACGTGCTTGACCTG+AGG | 0.640354 | 7_2:-51466413 | None:intergenic |
| GTATTCAGATCAAAATGTTG+AGG | 0.642355 | 7_2:-51464851 | None:intergenic |
| GCAGCAAAGGCTACTTAGAG+GGG | 0.644853 | 7_2:+51467468 | Msa1061600:intron |
| TTAAGGTGGGGACTTCAAAG+TGG | 0.662888 | 7_2:+51467224 | Msa1061600:CDS |
| GGCACTGGCTAGGACTCTAG+AGG | 0.670622 | 7_2:+51466152 | Msa1061600:CDS |
| CTATAAGTAGTAGACCTATG+TGG | 0.681561 | 7_2:-51467962 | None:intergenic |
| AAAGGGTTCGGAGTAAAAGG+TGG | 0.689720 | 7_2:-51464606 | None:intergenic |
| GCATACTTGAGCATATATGG+GGG | 0.716888 | 7_2:-51467722 | None:intergenic |
| CATGATCCAGGAGAACCTAG+AGG | 0.721296 | 7_2:-51467122 | None:intergenic |
| TCTGCTGGGGTTGTACAGCG+TGG | 0.750353 | 7_2:+51465563 | Msa1061600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATAAAAAAAATA+AGG | - | chr7_2:51465659-51465678 | None:intergenic | 0.0% |
| !!! | TTATATGAAACTAATATTTT+AGG | + | chr7_2:51465444-51465463 | Msa1061600:intron | 10.0% |
| !!! | TTATTTAATGATATTTCTAA+CGG | - | chr7_2:51466772-51466791 | None:intergenic | 10.0% |
| !! | ATGGAAAAAGAAAATATAAA+TGG | + | chr7_2:51464827-51464846 | Msa1061600:CDS | 15.0% |
| !!! | TATTTAATGATATTTCTAAC+GGG | - | chr7_2:51466771-51466790 | None:intergenic | 15.0% |
| !!! | GTAATCTAAATGATATTTTT+TGG | + | chr7_2:51467023-51467042 | Msa1061600:intron | 15.0% |
| !! | GAAGAAGAATAAAAAAAATA+AGG | - | chr7_2:51467420-51467439 | None:intergenic | 15.0% |
| !!! | TTTTCTCAGTTTTTTTACAT+AGG | - | chr7_2:51464686-51464705 | None:intergenic | 20.0% |
| !!! | AAAAAATGTTTTGTTTGTTC+TGG | + | chr7_2:51465478-51465497 | Msa1061600:intron | 20.0% |
| !!! | GAATAAATTGGTGATATAAA+AGG | + | chr7_2:51465866-51465885 | Msa1061600:intron | 20.0% |
| !!! | ACTTTATTTTTTATCCATAC+AGG | + | chr7_2:51466097-51466116 | Msa1061600:intron | 20.0% |
| !!! | TGATTACATTGATTTATATC+TGG | + | chr7_2:51466185-51466204 | Msa1061600:CDS | 20.0% |
| !! | TATCATTTAGATTACTCAAA+TGG | - | chr7_2:51467018-51467037 | None:intergenic | 20.0% |
| !!! | AGTTTTTATGTTTTCAACAA+AGG | - | chr7_2:51467374-51467393 | None:intergenic | 20.0% |
| !! | AACTATCTTAAATGAAATGA+AGG | - | chr7_2:51467692-51467711 | None:intergenic | 20.0% |
| !! | ACAAAAAAATCATGGATAAT+AGG | - | chr7_2:51467835-51467854 | None:intergenic | 20.0% |
| ! | TAAATGTGACATAAAGCAAA+GGG | - | chr7_2:51464626-51464645 | None:intergenic | 25.0% |
| ! | ATAAATGTGACATAAAGCAA+AGG | - | chr7_2:51464627-51464646 | None:intergenic | 25.0% |
| !! | TATAGCAATTTGTTTCAAGA+AGG | + | chr7_2:51464711-51464730 | Msa1061600:five_prime_UTR | 25.0% |
| !! | ATAGCAATTTGTTTCAAGAA+GGG | + | chr7_2:51464712-51464731 | Msa1061600:five_prime_UTR | 25.0% |
| !!! | TCTTCTTCTTTTTTAGAAGA+TGG | + | chr7_2:51464808-51464827 | Msa1061600:intron | 25.0% |
| ! | TGTAATTACATTACATGTGT+CGG | + | chr7_2:51465070-51465089 | Msa1061600:intron | 25.0% |
| !! | GGTATATGATAATGAAAAAG+AGG | + | chr7_2:51465403-51465422 | Msa1061600:CDS | 25.0% |
| ! | TTGTAAAATATGAGAAGAAG+AGG | + | chr7_2:51465742-51465761 | Msa1061600:intron | 25.0% |
| ! | TGATTACATCATAATCAATC+TGG | - | chr7_2:51465796-51465815 | None:intergenic | 25.0% |
| !! | TTGACAATTTTGTGTATACA+AGG | + | chr7_2:51465898-51465917 | Msa1061600:intron | 25.0% |
| ! | CAATGAATTGTCTTCATATA+TGG | + | chr7_2:51466070-51466089 | Msa1061600:intron | 25.0% |
| !!! | ACATTGATTTATATCTGGTA+TGG | + | chr7_2:51466190-51466209 | Msa1061600:intron | 25.0% |
| ! | ATACTATATCCATCTTATCA+GGG | - | chr7_2:51466592-51466611 | None:intergenic | 25.0% |
| ! | TCAGCAATTTCAATCAAAAT+TGG | - | chr7_2:51467173-51467192 | None:intergenic | 25.0% |
| ! | AAAAAAATAAGGCATACATG+TGG | - | chr7_2:51467409-51467428 | None:intergenic | 25.0% |
| !! | AAATCTTCAAGACTTTTGTA+TGG | - | chr7_2:51467520-51467539 | None:intergenic | 25.0% |
| GTATTCAGATCAAAATGTTG+AGG | - | chr7_2:51464854-51464873 | None:intergenic | 30.0% | |
| !! | CAACATTTTGATCTGAATAC+TGG | + | chr7_2:51464854-51464873 | Msa1061600:CDS | 30.0% |
| ! | CTTTTTGCTTCTTAATCTCT+TGG | + | chr7_2:51464971-51464990 | Msa1061600:intron | 30.0% |
| !! | ATTGTCTCAATGATTTGTTC+AGG | + | chr7_2:51465352-51465371 | Msa1061600:intron | 30.0% |
| ! | CAATTTATTCCTTTTCCTAG+AGG | - | chr7_2:51465856-51465875 | None:intergenic | 30.0% |
| ! | CTCTAGGAAAAGGAATAAAT+TGG | + | chr7_2:51465854-51465873 | Msa1061600:intron | 30.0% |
| ! | TTTTGTGTATACAAGGACTA+AGG | + | chr7_2:51465905-51465924 | Msa1061600:intron | 30.0% |
| TTTGTGTATACAAGGACTAA+GGG | + | chr7_2:51465906-51465925 | Msa1061600:intron | 30.0% | |
| TGATGACATTATAGTATCTG+AGG | + | chr7_2:51465964-51465983 | Msa1061600:intron | 30.0% | |
| GATGACATTATAGTATCTGA+GGG | + | chr7_2:51465965-51465984 | Msa1061600:intron | 30.0% | |
| GACTAATGTAGTTTGATACT+TGG | + | chr7_2:51466016-51466035 | Msa1061600:intron | 30.0% | |
| TTTGATACTTGGATGATTGA+GGG | + | chr7_2:51466027-51466046 | Msa1061600:intron | 30.0% | |
| ATTATTTGTCTCAGATGCAT+TGG | + | chr7_2:51466293-51466312 | Msa1061600:intron | 30.0% | |
| ! | CATAATTTGTGCAATTCTAC+TGG | + | chr7_2:51466547-51466566 | Msa1061600:CDS | 30.0% |
| CATACTATATCCATCTTATC+AGG | - | chr7_2:51466593-51466612 | None:intergenic | 30.0% | |
| ATTAAAGACCAAAACTCGTT+TGG | - | chr7_2:51466618-51466637 | None:intergenic | 30.0% | |
| TATTTATTACCCTGCATATG+CGG | + | chr7_2:51466707-51466726 | Msa1061600:intron | 30.0% | |
| AACGGGAATACTCATTAAAA+GGG | - | chr7_2:51466754-51466773 | None:intergenic | 30.0% | |
| TAACGGGAATACTCATTAAA+AGG | - | chr7_2:51466755-51466774 | None:intergenic | 30.0% | |
| !! | TACAAAGTGTTGCCAAATAA+TGG | + | chr7_2:51466909-51466928 | Msa1061600:intron | 30.0% |
| ATATCAGTGAGGAAAATAAG+GGG | - | chr7_2:51466975-51466994 | None:intergenic | 30.0% | |
| GATATCAGTGAGGAAAATAA+GGG | - | chr7_2:51466976-51466995 | None:intergenic | 30.0% | |
| AGATATCAGTGAGGAAAATA+AGG | - | chr7_2:51466977-51466996 | None:intergenic | 30.0% | |
| ! | TATTTTCCTCACTGATATCT+AGG | + | chr7_2:51466977-51466996 | Msa1061600:intron | 30.0% |
| TCAAATGGACATGTATAGTA+TGG | - | chr7_2:51467003-51467022 | None:intergenic | 30.0% | |
| AACCTCAAATACATAAATGC+AGG | - | chr7_2:51467050-51467069 | None:intergenic | 30.0% | |
| AGAACCTTAGCTTATTTGAT+TGG | + | chr7_2:51467291-51467310 | Msa1061600:CDS | 30.0% | |
| TACACCAATCAAATAAGCTA+AGG | - | chr7_2:51467298-51467317 | None:intergenic | 30.0% | |
| ! | TTTGTTGTATAATGCAGCAA+AGG | + | chr7_2:51467455-51467474 | Msa1061600:intron | 30.0% |
| ACAAAAGTCTTGAAGATTTG+TGG | + | chr7_2:51467521-51467540 | Msa1061600:CDS | 30.0% | |
| CAAAAGTCTTGAAGATTTGT+GGG | + | chr7_2:51467522-51467541 | Msa1061600:CDS | 30.0% | |
| TATGTTCATTTCTCTTTCTG+TGG | + | chr7_2:51467595-51467614 | Msa1061600:three_prime_UTR | 30.0% | |
| ATGTTCATTTCTCTTTCTGT+GGG | + | chr7_2:51467596-51467615 | Msa1061600:three_prime_UTR | 30.0% | |
| !!! | TAGCTAGATATTTTAGCAGA+AGG | + | chr7_2:51467637-51467656 | Msa1061600:three_prime_UTR | 30.0% |
| ! | ATGTTTACGGTAGTGTATTT+TGG | - | chr7_2:51467747-51467766 | None:intergenic | 30.0% |
| CCAACGAAACAAAAAAATCA+TGG | - | chr7_2:51467843-51467862 | None:intergenic | 30.0% | |
| !!! | CCATGATTTTTTTGTTTCGT+TGG | + | chr7_2:51467840-51467859 | Msa1061600:three_prime_UTR | 30.0% |
| ! | AAGATACCATCAATTGGTCT+TGG | + | chr7_2:51464881-51464900 | Msa1061600:CDS | 35.0% |
| TCTCACATTATTAGCAGTGT+CGG | - | chr7_2:51465034-51465053 | None:intergenic | 35.0% | |
| ATGAAAAGTGGATCTGAAGA+TGG | + | chr7_2:51465765-51465784 | Msa1061600:intron | 35.0% | |
| AATTGTCATCCAATTCCTCT+AGG | + | chr7_2:51465838-51465857 | Msa1061600:intron | 35.0% | |
| ! | ATTCCTTTTCCTAGAGGAAT+TGG | - | chr7_2:51465850-51465869 | None:intergenic | 35.0% |
| GTTTGATACTTGGATGATTG+AGG | + | chr7_2:51466026-51466045 | Msa1061600:intron | 35.0% | |
| AATCAATGTAATCAAGCTGC+AGG | - | chr7_2:51466179-51466198 | None:intergenic | 35.0% | |
| CATACAATCATCTTCAGTCT+CGG | - | chr7_2:51466249-51466268 | None:intergenic | 35.0% | |
| ! | GATCCTGATTTTGTCCTAAA+AGG | - | chr7_2:51466319-51466338 | None:intergenic | 35.0% |
| TTAGGACAAAATCAGGATCA+AGG | + | chr7_2:51466320-51466339 | Msa1061600:CDS | 35.0% | |
| TAGGACAAAATCAGGATCAA+GGG | + | chr7_2:51466321-51466340 | Msa1061600:CDS | 35.0% | |
| ! | CATGTCTCTGAAAGACATAA+GGG | - | chr7_2:51466370-51466389 | None:intergenic | 35.0% |
| AAGAAGCTTCAAGACTTACT+CGG | + | chr7_2:51466457-51466476 | Msa1061600:CDS | 35.0% | |
| TTGCACAAATTATGAAGAGC+TGG | - | chr7_2:51466541-51466560 | None:intergenic | 35.0% | |
| ! | AGTATGTTCCAAACGAGTTT+TGG | + | chr7_2:51466607-51466626 | Msa1061600:intron | 35.0% |
| ATTTATTACCCTGCATATGC+GGG | + | chr7_2:51466708-51466727 | Msa1061600:intron | 35.0% | |
| GTCCTGCATTTATGTATTTG+AGG | + | chr7_2:51467045-51467064 | Msa1061600:intron | 35.0% | |
| CTAGATTCGTTAACACTCTT+TGG | - | chr7_2:51467263-51467282 | None:intergenic | 35.0% | |
| !! | CAAAGAGTGTTAACGAATCT+AGG | + | chr7_2:51467261-51467280 | Msa1061600:CDS | 35.0% |
| !!! | ATTTTGAGAAGAGTTCTGGA+GGG | - | chr7_2:51467322-51467341 | None:intergenic | 35.0% |
| !! | AATTTTGAGAAGAGTTCTGG+AGG | - | chr7_2:51467323-51467342 | None:intergenic | 35.0% |
| !! | GAGAATTTTGAGAAGAGTTC+TGG | - | chr7_2:51467326-51467345 | None:intergenic | 35.0% |
| AAAATTCTCACAGATTCACC+AGG | + | chr7_2:51467337-51467356 | Msa1061600:CDS | 35.0% | |
| ! | TGTATGGACTACAACTTTCA+TGG | - | chr7_2:51467504-51467523 | None:intergenic | 35.0% |
| TGGGATGGAGAAATATGAAA+TGG | + | chr7_2:51467541-51467560 | Msa1061600:exon | 35.0% | |
| CGACTTATGATTTCGTTATG+AGG | + | chr7_2:51467666-51467685 | Msa1061600:three_prime_UTR | 35.0% | |
| TGGCATACTTGAGCATATAT+GGG | - | chr7_2:51467727-51467746 | None:intergenic | 35.0% | |
| TTGGCATACTTGAGCATATA+TGG | - | chr7_2:51467728-51467747 | None:intergenic | 35.0% | |
| GTGACATAAAGCAAAGGGTT+CGG | - | chr7_2:51464621-51464640 | None:intergenic | 40.0% | |
| GGTGCAAAGATACCATCAAT+TGG | + | chr7_2:51464875-51464894 | Msa1061600:CDS | 40.0% | |
| CATGTTCCAAGACCAATTGA+TGG | - | chr7_2:51464890-51464909 | None:intergenic | 40.0% | |
| !! | CATCAATTGGTCTTGGAACA+TGG | + | chr7_2:51464888-51464907 | Msa1061600:CDS | 40.0% |
| TGGTTTCTCTCTATGAAGCA+CGG | + | chr7_2:51464991-51465010 | Msa1061600:intron | 40.0% | |
| ! | TACATTACATGTGTCGGTGT+CGG | + | chr7_2:51465076-51465095 | Msa1061600:intron | 40.0% |
| ! | AACTACATGTGCCGTTGTAT+CGG | + | chr7_2:51465250-51465269 | Msa1061600:intron | 40.0% |
| !! | TCTCAATGATTTGTTCAGGC+TGG | + | chr7_2:51465356-51465375 | Msa1061600:intron | 40.0% |
| ! | ACAGACATATCGATTGTGCT+CGG | + | chr7_2:51465381-51465400 | Msa1061600:CDS | 40.0% |
| ! | AGGAAAGTTGTATTTGCTGC+AGG | + | chr7_2:51465514-51465533 | Msa1061600:intron | 40.0% |
| ! | AAGTTGTATTTGCTGCAGGT+AGG | + | chr7_2:51465518-51465537 | Msa1061600:intron | 40.0% |
| ! | TTGAAGACAGTGTTTTCTGC+TGG | + | chr7_2:51465548-51465567 | Msa1061600:CDS | 40.0% |
| ! | TGAAGACAGTGTTTTCTGCT+GGG | + | chr7_2:51465549-51465568 | Msa1061600:CDS | 40.0% |
| TGTTCATCACATCAAAGCTG+TGG | + | chr7_2:51465591-51465610 | Msa1061600:CDS | 40.0% | |
| GAGAAGAAGAGGATGAAAAG+TGG | + | chr7_2:51465753-51465772 | Msa1061600:intron | 40.0% | |
| ! | CATCCAATTCCTCTAGGAAA+AGG | + | chr7_2:51465844-51465863 | Msa1061600:intron | 40.0% |
| !!! | TGGCCTTTTAGGACAAAATC+AGG | + | chr7_2:51466313-51466332 | Msa1061600:CDS | 40.0% |
| AGGACAAAATCAGGATCAAG+GGG | + | chr7_2:51466322-51466341 | Msa1061600:CDS | 40.0% | |
| AAAATCAGGATCAAGGGGTT+GGG | + | chr7_2:51466327-51466346 | Msa1061600:CDS | 40.0% | |
| ! | CCATGTCTCTGAAAGACATA+AGG | - | chr7_2:51466371-51466390 | None:intergenic | 40.0% |
| CCTTATGTCTTTCAGAGACA+TGG | + | chr7_2:51466368-51466387 | Msa1061600:CDS | 40.0% | |
| CATTCAACTTGGTTAACTGC+TGG | - | chr7_2:51466499-51466518 | None:intergenic | 40.0% | |
| AAACAGGATGGCATTCAACT+TGG | - | chr7_2:51466510-51466529 | None:intergenic | 40.0% | |
| AAGTTGAATGCCATCCTGTT+TGG | + | chr7_2:51466509-51466528 | Msa1061600:CDS | 40.0% | |
| TTCTACTGGTGTTCATCTCA+CGG | + | chr7_2:51466561-51466580 | Msa1061600:CDS | 40.0% | |
| ACGGTAATACCCTGATAAGA+TGG | + | chr7_2:51466580-51466599 | Msa1061600:intron | 40.0% | |
| TACTCATTAAAAGGGCAACC+CGG | - | chr7_2:51466746-51466765 | None:intergenic | 40.0% | |
| AGTGTTGCAAATAGCACTAC+AGG | + | chr7_2:51466837-51466856 | Msa1061600:intron | 40.0% | |
| ! | GTGCTGCTATAGCCATTATT+TGG | - | chr7_2:51466924-51466943 | None:intergenic | 40.0% |
| TCTATAGCACTGTAGCGTAA+CGG | + | chr7_2:51466946-51466965 | Msa1061600:intron | 40.0% | |
| AACTACAAATGCTTCCTTGC+AGG | + | chr7_2:51467091-51467110 | Msa1061600:intron | 40.0% | |
| GGTAAAGGGAGAAATCTTGA+AGG | + | chr7_2:51467145-51467164 | Msa1061600:CDS | 40.0% | |
| AGTCTTGAAGATTTGTGGGA+TGG | + | chr7_2:51467526-51467545 | Msa1061600:CDS | 40.0% | |
| GCATACTTGAGCATATATGG+GGG | - | chr7_2:51467725-51467744 | None:intergenic | 40.0% | |
| GGCATACTTGAGCATATATG+GGG | - | chr7_2:51467726-51467745 | None:intergenic | 40.0% | |
| ! | GCTTACAGGAAGCATGTTTA+CGG | - | chr7_2:51467760-51467779 | None:intergenic | 40.0% |
| AAAGGGTTCGGAGTAAAAGG+TGG | - | chr7_2:51464609-51464628 | None:intergenic | 45.0% | |
| AGCAAAGGGTTCGGAGTAAA+AGG | - | chr7_2:51464612-51464631 | None:intergenic | 45.0% | |
| !! | AAAGCTTCTCCTGGTGTTGT+TGG | + | chr7_2:51464911-51464930 | Msa1061600:CDS | 45.0% |
| CTCTCTATGAAGCACGGATA+CGG | + | chr7_2:51464997-51465016 | Msa1061600:intron | 45.0% | |
| GATTACATGTGTCCCTGTGT+CGG | - | chr7_2:51465115-51465134 | None:intergenic | 45.0% | |
| AATGAAGCACAAACCCTCCT+CGG | - | chr7_2:51465137-51465156 | None:intergenic | 45.0% | |
| GTGTCAATCCACCGATACAA+CGG | - | chr7_2:51465264-51465283 | None:intergenic | 45.0% | |
| !! | ATCGGTGGATTGACACATGT+TGG | + | chr7_2:51465268-51465287 | Msa1061600:intron | 45.0% |
| ! | CAATCTGAAGTATCAGCGCT+AGG | + | chr7_2:51465307-51465326 | Msa1061600:intron | 45.0% |
| ! | CAGACATATCGATTGTGCTC+GGG | + | chr7_2:51465382-51465401 | Msa1061600:CDS | 45.0% |
| GTTCTGGCATTCTTGATGCT+AGG | + | chr7_2:51465494-51465513 | Msa1061600:intron | 45.0% | |
| ! | GAAGACAGTGTTTTCTGCTG+GGG | + | chr7_2:51465550-51465569 | Msa1061600:CDS | 45.0% |
| GCACAGTCACTAATCCTGTA+TGG | - | chr7_2:51466114-51466133 | None:intergenic | 45.0% | |
| TGCACCTGAAGATGTCTCAA+AGG | + | chr7_2:51466131-51466150 | Msa1061600:CDS | 45.0% | |
| !! | AGTGCCTTTGAGACATCTTC+AGG | - | chr7_2:51466138-51466157 | None:intergenic | 45.0% |
| ! | TGAAGATGTCTCAAAGGCAC+TGG | + | chr7_2:51466137-51466156 | Msa1061600:CDS | 45.0% |
| !!! | CTCAGATGCATTGGCCTTTT+AGG | + | chr7_2:51466302-51466321 | Msa1061600:intron | 45.0% |
| CAAAATCAGGATCAAGGGGT+TGG | + | chr7_2:51466326-51466345 | Msa1061600:CDS | 45.0% | |
| TTCAGAGACATGGAATGCGA+TGG | + | chr7_2:51466378-51466397 | Msa1061600:CDS | 45.0% | |
| ATGGAAGGTTTATTCGCCTC+AGG | + | chr7_2:51466397-51466416 | Msa1061600:CDS | 45.0% | |
| TCAACTTGGTTAACTGCTGG+TGG | - | chr7_2:51466496-51466515 | None:intergenic | 45.0% | |
| GCAAATAGCACTACAGGCAT+TGG | + | chr7_2:51466843-51466862 | Msa1061600:intron | 45.0% | |
| !! | AATAGCACTACAGGCATTGG+AGG | + | chr7_2:51466846-51466865 | Msa1061600:intron | 45.0% |
| GTATGGCCTAGATATCAGTG+AGG | - | chr7_2:51466986-51467005 | None:intergenic | 45.0% | |
| TAGAGGAGAATATGCCTGCA+AGG | - | chr7_2:51467108-51467127 | None:intergenic | 45.0% | |
| TTGCAGGCATATTCTCCTCT+AGG | + | chr7_2:51467107-51467126 | Msa1061600:intron | 45.0% | |
| TATTCTCCTCTAGGTTCTCC+TGG | + | chr7_2:51467116-51467135 | Msa1061600:CDS | 45.0% | |
| TCTAGGTTCTCCTGGATCAT+GGG | + | chr7_2:51467124-51467143 | Msa1061600:CDS | 45.0% | |
| TTCTCCTGGATCATGGGTAA+AGG | + | chr7_2:51467130-51467149 | Msa1061600:CDS | 45.0% | |
| TCTCCTGGATCATGGGTAAA+GGG | + | chr7_2:51467131-51467150 | Msa1061600:CDS | 45.0% | |
| TAACAAGTCTCCAGCACAAG+TGG | + | chr7_2:51467199-51467218 | Msa1061600:CDS | 45.0% | |
| !! | AGCACAAGTGGCTTTAAGGT+GGG | + | chr7_2:51467211-51467230 | Msa1061600:CDS | 45.0% |
| TTAAGGTGGGGACTTCAAAG+TGG | + | chr7_2:51467224-51467243 | Msa1061600:CDS | 45.0% | |
| ACAAAGGCAGTGATCAAACC+TGG | - | chr7_2:51467358-51467377 | None:intergenic | 45.0% | |
| ATGCAGCAAAGGCTACTTAG+AGG | + | chr7_2:51467466-51467485 | Msa1061600:intron | 45.0% | |
| TGCAGCAAAGGCTACTTAGA+GGG | + | chr7_2:51467467-51467486 | Msa1061600:intron | 45.0% | |
| TACTTGAGCATATATGGGGG+CGG | - | chr7_2:51467722-51467741 | None:intergenic | 45.0% | |
| ! | TGTAAGCCCCTGGTGTTTTT+GGG | + | chr7_2:51467773-51467792 | Msa1061600:three_prime_UTR | 45.0% |
| !! | TCATATAAATTTAAAAAATT+TGG | - | chr7_2:51465432-51465451 | None:intergenic | 5.0% |
| GGAACATGGAAAGCTTCTCC+TGG | + | chr7_2:51464902-51464921 | Msa1061600:CDS | 50.0% | |
| ACAGCATCACCAACAACACC+AGG | - | chr7_2:51464923-51464942 | None:intergenic | 50.0% | |
| TGCTGTTGTTGCTGCAGTCA+AGG | + | chr7_2:51464937-51464956 | Msa1061600:CDS | 50.0% | |
| ACAGGGACACATGTAATCCG+AGG | + | chr7_2:51465117-51465136 | Msa1061600:intron | 50.0% | |
| GGACACATGTAATCCGAGGA+GGG | + | chr7_2:51465121-51465140 | Msa1061600:intron | 50.0% | |
| GAGGAGGGTTTGTGCTTCAT+TGG | + | chr7_2:51465136-51465155 | Msa1061600:intron | 50.0% | |
| ! | TACATGTGCCGTTGTATCGG+TGG | + | chr7_2:51465253-51465272 | Msa1061600:intron | 50.0% |
| !! | ATGTCTCAAAGGCACTGGCT+AGG | + | chr7_2:51466142-51466161 | Msa1061600:CDS | 50.0% |
| TCGGCATCATGTTCGAAGAC+TGG | - | chr7_2:51466230-51466249 | None:intergenic | 50.0% | |
| ATAAGGGAGCCATGACCTCA+GGG | - | chr7_2:51466354-51466373 | None:intergenic | 50.0% | |
| GAGACATGGAATGCGATGGA+AGG | + | chr7_2:51466382-51466401 | Msa1061600:CDS | 50.0% | |
| CTGGTTGTTGCCAAACAGGA+TGG | - | chr7_2:51466522-51466541 | None:intergenic | 50.0% | |
| AGAGCTGGTTGTTGCCAAAC+AGG | - | chr7_2:51466526-51466545 | None:intergenic | 50.0% | |
| CATGATCCAGGAGAACCTAG+AGG | - | chr7_2:51467125-51467144 | None:intergenic | 50.0% | |
| CTCTAGGTTCTCCTGGATCA+TGG | + | chr7_2:51467123-51467142 | Msa1061600:CDS | 50.0% | |
| TCTCCCTTTACCCATGATCC+AGG | - | chr7_2:51467137-51467156 | None:intergenic | 50.0% | |
| ! | CTCCAGCACAAGTGGCTTTA+AGG | + | chr7_2:51467207-51467226 | Msa1061600:CDS | 50.0% |
| CACCTTAAAGCCACTTGTGC+TGG | - | chr7_2:51467212-51467231 | None:intergenic | 50.0% | |
| !! | CAGCACAAGTGGCTTTAAGG+TGG | + | chr7_2:51467210-51467229 | Msa1061600:CDS | 50.0% |
| !! | GCACAAGTGGCTTTAAGGTG+GGG | + | chr7_2:51467212-51467231 | Msa1061600:CDS | 50.0% |
| GCAGCAAAGGCTACTTAGAG+GGG | + | chr7_2:51467468-51467487 | Msa1061600:intron | 50.0% | |
| CAAAAACACCAGGGGCTTAC+AGG | - | chr7_2:51467774-51467793 | None:intergenic | 50.0% | |
| ! | CTGTAAGCCCCTGGTGTTTT+TGG | + | chr7_2:51467772-51467791 | Msa1061600:three_prime_UTR | 50.0% |
| GGGACACATGTAATCCGAGG+AGG | + | chr7_2:51465120-51465139 | Msa1061600:intron | 55.0% | |
| ! | GTATTTGCTGCAGGTAGGCG+AGG | + | chr7_2:51465523-51465542 | Msa1061600:intron | 55.0% |
| CATAAGGGAGCCATGACCTC+AGG | - | chr7_2:51466355-51466374 | None:intergenic | 55.0% | |
| AATCGCACGTGCTTGACCTG+AGG | - | chr7_2:51466416-51466435 | None:intergenic | 55.0% | |
| TCAGGTCAAGCACGTGCGAT+TGG | + | chr7_2:51466415-51466434 | Msa1061600:CDS | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr7_2:51466719-51466738 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr7_2:51466720-51466739 | None:intergenic | 55.0% | |
| ACATGCTTCCTGTAAGCCCC+TGG | + | chr7_2:51467763-51467782 | Msa1061600:three_prime_UTR | 55.0% | |
| !!! | AAGCCCCTGGTGTTTTTGGG+TGG | + | chr7_2:51467776-51467795 | Msa1061600:three_prime_UTR | 55.0% |
| !!! | AGCCCCTGGTGTTTTTGGGT+GGG | + | chr7_2:51467777-51467796 | Msa1061600:three_prime_UTR | 55.0% |
| ACACGACACGTGTCCGACAC+AGG | + | chr7_2:51465099-51465118 | Msa1061600:intron | 60.0% | |
| CACGACACGTGTCCGACACA+GGG | + | chr7_2:51465100-51465119 | Msa1061600:intron | 60.0% | |
| TCTGCTGGGGTTGTACAGCG+TGG | + | chr7_2:51465563-51465582 | Msa1061600:CDS | 60.0% | |
| !! | GGCACTGGCTAGGACTCTAG+AGG | + | chr7_2:51466152-51466171 | Msa1061600:CDS | 60.0% |
| ATCAAGGGGTTGGGACCCTG+AGG | + | chr7_2:51466336-51466355 | Msa1061600:CDS | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr7_2:51466724-51466743 | Msa1061600:intron | 60.0% | |
| CGCCCACCCAAAAACACCAG+GGG | - | chr7_2:51467782-51467801 | None:intergenic | 60.0% | |
| CCGCCCACCCAAAAACACCA+GGG | - | chr7_2:51467783-51467802 | None:intergenic | 60.0% | |
| !!! | CCCTGGTGTTTTTGGGTGGG+CGG | + | chr7_2:51467780-51467799 | Msa1061600:three_prime_UTR | 60.0% |
| TCCGCCCACCCAAAAACACC+AGG | - | chr7_2:51467784-51467803 | None:intergenic | 60.0% | |
| GGGTTGGGACCCTGAGGTCA+TGG | + | chr7_2:51466342-51466361 | Msa1061600:CDS | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr7_2:51466725-51466744 | Msa1061600:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 51464598 | 51467969 | 51464598 | ID=Msa1061600;Name=Msa1061600 |
| chr7_2 | mRNA | 51464598 | 51467969 | 51464598 | ID=Msa1061600-mRNA-1;Parent=Msa1061600;Name=Msa1061600-mRNA-1;_AED=0.10;_eAED=0.10;_QI=139|1|1|1|0.85|0.75|8|411|318 |
| chr7_2 | exon | 51464598 | 51464733 | 51464598 | ID=Msa1061600-mRNA-1:exon:9288;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51464824 | 51464958 | 51464824 | ID=Msa1061600-mRNA-1:exon:9289;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51465374 | 51465424 | 51465374 | ID=Msa1061600-mRNA-1:exon:9290;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51465536 | 51465612 | 51465536 | ID=Msa1061600-mRNA-1:exon:9291;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51466119 | 51466206 | 51466119 | ID=Msa1061600-mRNA-1:exon:9292;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51466307 | 51466582 | 51466307 | ID=Msa1061600-mRNA-1:exon:9293;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51467113 | 51467358 | 51467113 | ID=Msa1061600-mRNA-1:exon:9294;Parent=Msa1061600-mRNA-1 |
| chr7_2 | exon | 51467472 | 51467969 | 51467472 | ID=Msa1061600-mRNA-1:exon:9295;Parent=Msa1061600-mRNA-1 |
| chr7_2 | five_prime_UTR | 51464598 | 51464733 | 51464598 | ID=Msa1061600-mRNA-1:five_prime_utr;Parent=Msa1061600-mRNA-1 |
| chr7_2 | five_prime_UTR | 51464824 | 51464826 | 51464824 | ID=Msa1061600-mRNA-1:five_prime_utr;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51464827 | 51464958 | 51464827 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51465374 | 51465424 | 51465374 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51465536 | 51465612 | 51465536 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51466119 | 51466206 | 51466119 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51466307 | 51466582 | 51466307 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51467113 | 51467358 | 51467113 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | CDS | 51467472 | 51467558 | 51467472 | ID=Msa1061600-mRNA-1:cds;Parent=Msa1061600-mRNA-1 |
| chr7_2 | three_prime_UTR | 51467559 | 51467969 | 51467559 | ID=Msa1061600-mRNA-1:three_prime_utr;Parent=Msa1061600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
