AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0996080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996080 MtrunA17_Chr6g0480631 96.414 502 15 1 1 502 1 499 0.0 998
Msa0996080 MtrunA17_Chr3g0109901 72.568 514 123 5 1 502 1 508 0.0 760
Msa0996080 MtrunA17_Chr8g0375301 69.528 466 130 3 17 473 14 476 0.0 674
Msa0996080 MtrunA17_Chr5g0433931 67.718 412 122 3 99 502 1 409 0.0 583
Msa0996080 MtrunA17_Chr5g0433921 79.000 100 18 1 1 100 1 97 1.60e-49 165
Msa0996080 MtrunA17_Chr7g0222381 25.275 364 239 12 86 439 159 499 4.74e-17 84.0
Msa0996080 MtrunA17_Chr5g0432951 76.923 39 9 0 258 296 15 53 3.37e-15 71.2
Msa0996080 MtrunA17_Chr5g0432961 52.174 69 33 0 378 446 13 81 2.07e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996080 AT2G02010.2 75.703 498 109 3 1 498 53 538 0.0 787
Msa0996080 AT2G02010.1 75.703 498 109 3 1 498 1 486 0.0 786
Msa0996080 AT5G17330.1 74.609 512 110 6 1 502 1 502 0.0 772
Msa0996080 AT3G17760.2 75.911 494 109 4 12 502 8 494 0.0 772
Msa0996080 AT3G17760.1 75.911 494 109 4 12 502 8 494 0.0 772
Msa0996080 AT2G02000.1 73.038 497 122 3 1 497 1 485 0.0 763
Msa0996080 AT1G65960.2 74.603 504 116 5 1 502 1 494 0.0 763
Msa0996080 AT1G65960.1 73.585 371 90 4 134 502 1 365 0.0 550
Msa0996080 AT1G65960.3 73.585 371 90 4 134 502 1 365 0.0 550
Msa0996080 AT1G65960.4 73.585 371 90 4 134 502 1 365 0.0 550
Msa0996080 AT3G17720.1 68.485 165 46 2 94 258 27 185 5.06e-74 232
Msa0996080 AT1G27980.1 23.836 365 243 12 84 437 160 500 1.05e-13 73.9

Find 136 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTGTGTTGCAGCCATTT+TGG 0.165886 6_4:-73726197 Msa0996080:CDS
TTCCATTGTTGCTTTATCTA+TGG 0.221404 6_4:-73724814 Msa0996080:three_prime_UTR
CTGGTATTGGTTGGGTTGTT+TGG 0.223066 6_4:-73725958 Msa0996080:CDS
TTCTCTACCCTGATCTTCTA+TGG 0.235227 6_4:-73726045 Msa0996080:CDS
CTCAATACTACCAATTTATA+CGG 0.248455 6_4:-73725648 Msa0996080:CDS
AGTTGAAGAAATCACCATTT+TGG 0.255929 6_4:+73729078 None:intergenic
ACGTGGTTAAATAGTCATTT+TGG 0.263773 6_4:+73729263 None:intergenic
ATCTGATATGCTGCATCTTT+TGG 0.270173 6_4:+73728864 None:intergenic
TCCTGTCACCACTGAGCTTC+AGG 0.282193 6_4:-73728706 Msa0996080:intron
TTCATTCATTCATATCAATA+TGG 0.292094 6_4:+73724755 None:intergenic
TCAAAGCTTTGTTCATTCTC+AGG 0.302415 6_4:-73726746 Msa0996080:CDS
ATCGAGTTGTATGACATAAT+TGG 0.303447 6_4:+73729478 None:intergenic
TAACAAGAATTATGTTGATA+TGG 0.304779 6_4:-73728736 Msa0996080:CDS
AGACTCATGCTGAGATTCTT+AGG 0.307314 6_4:-73724969 Msa0996080:CDS
CGAAACCAAGCCGTATAAAT+TGG 0.310989 6_4:+73725638 None:intergenic
TGTGCAAGTCATGGGATAAA+AGG 0.332953 6_4:-73729751 Msa0996080:five_prime_UTR
GATAAGCCTAACATAGTTAC+TGG 0.334663 6_4:-73727497 Msa0996080:CDS
TTCTAGATACGTGCGTGAAC+AGG 0.356943 6_4:-73729008 Msa0996080:CDS
AATCCACACTGAGGACAAAA+AGG 0.357459 6_4:-73729663 Msa0996080:five_prime_UTR
CGGAAATCCCATAGAAGATC+AGG 0.359620 6_4:+73726037 None:intergenic
GAGGCATAAAGCTGACTTAC+CGG 0.359836 6_4:-73725936 Msa0996080:CDS
GGTCTTGTTTACCCTGGTAT+TGG 0.363471 6_4:-73725971 Msa0996080:CDS
ATGCTGAGATTCTTAGGTAT+TGG 0.366104 6_4:-73724963 Msa0996080:CDS
GGTCAGCGTTGAACCCAAAA+TGG 0.377604 6_4:+73726183 None:intergenic
AATGATGAGTTGATGTTAGA+TGG 0.378531 6_4:-73728837 Msa0996080:CDS
GTTTGTGGGTGAAGTAGATT+TGG 0.381006 6_4:+73729717 None:intergenic
CATCTATTCAATGCTCCTAT+TGG 0.381425 6_4:-73727638 Msa0996080:CDS
TGGCTTCATTTGTGACTACT+TGG 0.381755 6_4:-73728797 Msa0996080:CDS
GCAGTTTCCTCTTCACCAAT+AGG 0.385794 6_4:+73727623 None:intergenic
CAGAACTCATCCAACCAAAA+TGG 0.395608 6_4:-73729092 Msa0996080:exon
CAAAGCTTTGTTCATTCTCA+GGG 0.396087 6_4:-73726745 Msa0996080:CDS
CGTTCTCCGAGTGGTGATTA+GGG 0.399525 6_4:-73725148 Msa0996080:CDS
ACCATTTCAACAGCTTTCAA+TGG 0.408300 6_4:+73726232 None:intergenic
CAAGCTACATTATGTGTCAT+AGG 0.414559 6_4:+73729434 None:intergenic
TACTACCAATTTATACGGCT+TGG 0.417677 6_4:-73725643 Msa0996080:CDS
TTGTTTACCCTGGTATTGGT+TGG 0.425703 6_4:-73725967 Msa0996080:CDS
CGTGTGATCACTTATTCTTA+AGG 0.425892 6_4:-73729243 Msa0996080:five_prime_UTR
AGAAGATCAGGGTAGAGAAA+TGG 0.425931 6_4:+73726049 None:intergenic
GCAGATCATCTGAGAAAATA+CGG 0.429926 6_4:-73725219 Msa0996080:CDS
GTCTCTACAACTATTTATAG+AGG 0.430459 6_4:-73729581 Msa0996080:five_prime_UTR
AAAATACGGGTGGATAGTTC+CGG 0.431504 6_4:-73725205 Msa0996080:CDS
TGTTTACCCTGGTATTGGTT+GGG 0.431991 6_4:-73725966 Msa0996080:CDS
ACTATGTTAGGCTTATCATA+TGG 0.438480 6_4:+73727503 None:intergenic
AAGGAAGGAATTGAGAAAAC+AGG 0.440850 6_4:-73725330 Msa0996080:CDS
TCTCTACCCTGATCTTCTAT+GGG 0.446103 6_4:-73726044 Msa0996080:CDS
AACGCTGACCGGAGAGTTTG+AGG 0.448685 6_4:-73726170 Msa0996080:CDS
ATGATGTTGATCATGTTTCA+AGG 0.449196 6_4:+73729691 None:intergenic
GTACTTTGAGGTTGAGCTAA+AGG 0.449977 6_4:-73726290 Msa0996080:CDS
TGGAAAACCAAGGCTTAACT+TGG 0.451331 6_4:-73728817 Msa0996080:CDS
TTAGCTCCAGTAACTATGTT+AGG 0.451511 6_4:+73727491 None:intergenic
ATTTATACGGCTTGGTTTCG+AGG 0.462533 6_4:-73725635 Msa0996080:intron
GTATTGGTTGGGTTGTTTGG+AGG 0.473665 6_4:-73725955 Msa0996080:CDS
AAAATTTGCCAGGTACTTTG+AGG 0.476874 6_4:-73726302 Msa0996080:intron
CAAGAGAGTTGGAGCATGCT+AGG 0.479668 6_4:-73724923 Msa0996080:exon
GCAGTAGGTGTTGGAACTGT+AGG 0.480901 6_4:-73727602 Msa0996080:CDS
TTCATTTGTGACTACTTGGA+TGG 0.490554 6_4:-73728793 Msa0996080:CDS
CAAACAACCCAACCAATACC+AGG 0.491052 6_4:+73725959 None:intergenic
CTCGCAGCATCTACATGAAT+CGG 0.494467 6_4:+73726088 None:intergenic
TCCATTGAAAGCTGTTGAAA+TGG 0.494508 6_4:-73726233 Msa0996080:CDS
GCATACATTTGATGTGTGTA+AGG 0.494596 6_4:-73724841 Msa0996080:three_prime_UTR
AAAGCAACTCACAACAATCA+AGG 0.494924 6_4:+73724872 None:intergenic
AATGAAGCCAAGTTAAGCCT+TGG 0.498497 6_4:+73728810 None:intergenic
AAAATTGTCTCCAAGGACAT+AGG 0.500052 6_4:-73725300 Msa0996080:CDS
ATGTTTCAAGGATTGTTTGT+GGG 0.500425 6_4:+73729703 None:intergenic
ATGGGATTTCCGTTTGCCGT+TGG 0.504123 6_4:-73726026 Msa0996080:CDS
CATGTAGATGCTGCGAGTGG+CGG 0.508504 6_4:-73726082 Msa0996080:CDS
GAAATAACATGTGCAAGTCA+TGG 0.510606 6_4:-73729760 None:intergenic
TGCGTCCGCTGGCATTGTGT+AGG 0.512284 6_4:+73725182 None:intergenic
ACATAATTGGAGGTTTATTG+AGG 0.512915 6_4:+73729491 None:intergenic
CTTGTGGATGGCAAGAGAGT+TGG 0.513748 6_4:-73724934 Msa0996080:CDS
ACCTGAAGCTCAGTGGTGAC+AGG 0.517726 6_4:+73728705 None:intergenic
AAGGTTTAAAATTGTCTCCA+AGG 0.518110 6_4:-73725307 Msa0996080:CDS
AATGAACAAAGCTTTGAGAC+AGG 0.518595 6_4:+73726752 None:intergenic
TCCGCTGGCATTGTGTAGGC+CGG 0.520444 6_4:+73725186 None:intergenic
CAATGCTCCTATTGGTGAAG+AGG 0.522077 6_4:-73727630 Msa0996080:CDS
ACTGATCTTTGTGAAGATAG+AGG 0.525765 6_4:+73729178 None:intergenic
CTCCATAGATAAAGCAACAA+TGG 0.526759 6_4:+73724812 None:intergenic
AAGTGGCACACCTATGTCCT+TGG 0.528819 6_4:+73725290 None:intergenic
TGAGTGTGATAAGCTTATCA+TGG 0.535116 6_4:-73728766 Msa0996080:CDS
GAGGAAACTGCAGTAGGTGT+TGG 0.536508 6_4:-73727611 Msa0996080:CDS
TTCAAAAGATGCTCATGTTG+CGG 0.538145 6_4:-73725037 Msa0996080:CDS
CATGTTTCAAGGATTGTTTG+TGG 0.542523 6_4:+73729702 None:intergenic
CAGTAGGTGTTGGAACTGTA+GGG 0.543728 6_4:-73727601 Msa0996080:CDS
GAGTTGTATGACATAATTGG+AGG 0.546043 6_4:+73729481 None:intergenic
GGAAGATTTCAGCTGCAGCT+TGG 0.547015 6_4:-73725127 Msa0996080:CDS
AAATGTGATGGAAAATTGCT+TGG 0.550366 6_4:-73725370 Msa0996080:CDS
ACGAATGAGCAACGCTATGT+TGG 0.550929 6_4:+73729532 None:intergenic
AATGTTAGCGGTCACAAGTA+CGG 0.552630 6_4:-73725992 Msa0996080:CDS
ATATATAGATGCATGGACAT+TGG 0.552779 6_4:+73724781 None:intergenic
AAATAACATGTGCAAGTCAT+GGG 0.553359 6_4:-73729759 None:intergenic
CACAGAGGATTACTATGTGA+TGG 0.560082 6_4:-73726257 Msa0996080:CDS
CTTCACATCCTCAAACTCTC+CGG 0.561969 6_4:+73726162 None:intergenic
GCTGCTGTCTTTCAGAGAGA+AGG 0.565353 6_4:+73725263 None:intergenic
AAAAGAACAAGGAGACAGGA+TGG 0.565661 6_4:-73726117 Msa0996080:CDS
GTGAAAAGTATCAATGTTAG+CGG 0.565895 6_4:-73726004 Msa0996080:CDS
TCAGAGGCAATAATGCTAGC+TGG 0.572476 6_4:-73727575 Msa0996080:CDS
TTCATCATAAATGTATGCAA+AGG 0.581572 6_4:+73724719 None:intergenic
CAAAATGGCTGCAACACAGA+TGG 0.582491 6_4:+73726198 None:intergenic
GTTGCTCATTCGTCAAGAAG+TGG 0.586479 6_4:-73729522 Msa0996080:five_prime_UTR
GGCGAACACAAGAATTCTGA+AGG 0.590261 6_4:-73725349 Msa0996080:CDS
CAGATCATCTGAGAAAATAC+GGG 0.592208 6_4:-73725218 Msa0996080:CDS
ATGGTTCATATATAGATGCA+TGG 0.593809 6_4:+73724774 None:intergenic
AAAGAACAAGGAGACAGGAT+GGG 0.595274 6_4:-73726116 Msa0996080:CDS
AACACAAGAATTCTGAAGGA+AGG 0.596220 6_4:-73725345 Msa0996080:CDS
CCTAATCACCACTCGGAGAA+CGG 0.599728 6_4:+73725149 None:intergenic
AAGCAACTCACAACAATCAA+GGG 0.600601 6_4:+73724873 None:intergenic
TAGGTATTGGAAGAAACTTG+TGG 0.605147 6_4:-73724950 Msa0996080:CDS
AGTTACTGGAGCTAATGTGC+AGG 0.605359 6_4:-73727483 Msa0996080:intron
ATGATAAGCTTATCACACTC+AGG 0.609818 6_4:+73728768 None:intergenic
GATCACTTATTCTTAAGGAG+TGG 0.615220 6_4:-73729238 Msa0996080:five_prime_UTR
AAGGAATTGAGAAAACAGGA+AGG 0.618569 6_4:-73725326 Msa0996080:CDS
TTGCTCATTCGTCAAGAAGT+GGG 0.620054 6_4:-73729521 Msa0996080:five_prime_UTR
TCTTTCATAAAATCAAGTAG+TGG 0.621670 6_4:-73729202 Msa0996080:five_prime_UTR
TATTGGAAGAAACTTGTGGA+TGG 0.624449 6_4:-73724946 Msa0996080:CDS
GGAAATCCCATAGAAGATCA+GGG 0.625993 6_4:+73726038 None:intergenic
TTATAGAGGACTAATAATGT+CGG 0.635631 6_4:-73729567 Msa0996080:five_prime_UTR
AAGTACGGTCTTGTTTACCC+TGG 0.636562 6_4:-73725977 Msa0996080:CDS
ATCATCTGAGAAAATACGGG+TGG 0.643184 6_4:-73725215 Msa0996080:CDS
ATGAACAAAGCTTTGAGACA+GGG 0.643606 6_4:+73726753 None:intergenic
GGTGAAGAGGAAACTGCAGT+AGG 0.652830 6_4:-73727617 Msa0996080:CDS
TTCAGAGAGAAGGCTACAAG+TGG 0.654016 6_4:+73725273 None:intergenic
AAAGCTTTGTTCATTCTCAG+GGG 0.656828 6_4:-73726744 Msa0996080:intron
AAAACTGTTGTCGATCGATG+AGG 0.657169 6_4:+73729391 None:intergenic
TGGAACTGTAGGGTCATCAG+AGG 0.671933 6_4:-73727591 Msa0996080:CDS
AATCTTCCCTAATCACCACT+CGG 0.674071 6_4:+73725142 None:intergenic
CAGACTAAGAGAAAATCAGA+AGG 0.687264 6_4:-73727530 Msa0996080:CDS
TGATGTTAGATGGAAAACCA+AGG 0.691803 6_4:-73728827 Msa0996080:CDS
TCCGGCCTACACAATGCCAG+CGG 0.698888 6_4:-73725187 Msa0996080:CDS
AAACAACCCAACCAATACCA+GGG 0.700278 6_4:+73725960 None:intergenic
TAAACAAACCTGAAGCTCAG+TGG 0.702836 6_4:+73728698 None:intergenic
ATTCATGTAGATGCTGCGAG+TGG 0.706666 6_4:-73726085 Msa0996080:CDS
TATCGCGAGTGAGACAAGTG+AGG 0.713496 6_4:-73725013 Msa0996080:CDS
CAAAGATCATTGTAACAACG+AGG 0.720396 6_4:-73729300 Msa0996080:five_prime_UTR
TAAGAATAAGTGATCACACG+TGG 0.739314 6_4:+73729246 None:intergenic
TCATAAACTAATCCACACTG+AGG 0.756505 6_4:-73729672 Msa0996080:five_prime_UTR
AAAGGAAGTGAAACTCACAG+AGG 0.773932 6_4:-73726272 Msa0996080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATGAAAGAAAAAATTAG+AGG + chr6_4:73725234-73725253 None:intergenic 15.0%
!! TGGAATTTACTTAATAATAT+CGG - chr6_4:73728980-73728999 Msa0996080:intron 15.0%
!!! AATGTTTTAGCAGTAAATTT+TGG - chr6_4:73724842-73724861 Msa0996080:three_prime_UTR 20.0%
!!! ATGTTTTTTTAAGGAAGAAA+GGG + chr6_4:73725479-73725498 None:intergenic 20.0%
!! TAACAAGAATTATGTTGATA+TGG - chr6_4:73725709-73725728 Msa0996080:intron 20.0%
!!! TTGATCAAGATTTTGAATTA+TGG - chr6_4:73725785-73725804 Msa0996080:intron 20.0%
!!! GGATCAAATTTTAAACTAAA+AGG - chr6_4:73726085-73726104 Msa0996080:CDS 20.0%
!! AAATATTATTGCACAGTAAA+AGG - chr6_4:73726389-73726408 Msa0996080:intron 20.0%
!! AATATTATTGCACAGTAAAA+GGG - chr6_4:73726390-73726409 Msa0996080:intron 20.0%
!!! ATGATAGTTTTAAGGATTAA+AGG + chr6_4:73726487-73726506 None:intergenic 20.0%
!!! AAGTTTCTTTTTTGAAGAAA+GGG - chr6_4:73726516-73726535 Msa0996080:intron 20.0%
!!! TTTTTTAGATCTTTTGTGTT+TGG - chr6_4:73726594-73726613 Msa0996080:intron 20.0%
!!! AATATTTAGAAGTGTATGTT+TGG - chr6_4:73727066-73727085 Msa0996080:intron 20.0%
!!! AAATTCTTGATTTTACCTAA+AGG + chr6_4:73727300-73727319 None:intergenic 20.0%
!! GATGAAACAATAAATTTAGT+GGG + chr6_4:73727641-73727660 None:intergenic 20.0%
!! TGATGAAACAATAAATTTAG+TGG + chr6_4:73727642-73727661 None:intergenic 20.0%
!!! AATTTTGATTCTACAATACT+AGG + chr6_4:73727763-73727782 None:intergenic 20.0%
!! GAAAAATTTAATGTGAAAGT+TGG + chr6_4:73728576-73728595 None:intergenic 20.0%
!!! TTCACATTAAATTTTTCCAA+AGG - chr6_4:73728579-73728598 Msa0996080:intron 20.0%
!! TAATTAAATTCTTAAGCATG+TGG - chr6_4:73728624-73728643 Msa0996080:intron 20.0%
!! TTATGAGTATAATTCTTGTT+AGG + chr6_4:73728704-73728723 None:intergenic 20.0%
!! AAATACAAACCAACATTAAA+GGG + chr6_4:73728749-73728768 None:intergenic 20.0%
!!! TTTTTCTGTTTTTAGTCATA+TGG - chr6_4:73728960-73728979 Msa0996080:intron 20.0%
!! TTCATTCATTCATATCAATA+TGG + chr6_4:73729693-73729712 None:intergenic 20.0%
! TTATAGAGGACTAATAATGT+CGG - chr6_4:73724878-73724897 Msa0996080:three_prime_UTR 25.0%
! TCTTTCATAAAATCAAGTAG+TGG - chr6_4:73725243-73725262 Msa0996080:CDS 25.0%
!!! GATGTTTTTTTAAGGAAGAA+AGG + chr6_4:73725480-73725499 None:intergenic 25.0%
!!! ACCTAGTTTTTTTTGTAATG+AGG - chr6_4:73725502-73725521 Msa0996080:intron 25.0%
! ACCTCATTACAAAAAAAACT+AGG + chr6_4:73725506-73725525 None:intergenic 25.0%
! CTATATCAACACATAAACAT+AGG + chr6_4:73725536-73725555 None:intergenic 25.0%
!! CTATGTTTATGTGTTGATAT+AGG - chr6_4:73725534-73725553 Msa0996080:intron 25.0%
! GATCCTATATAGTTTCAATA+TGG + chr6_4:73726070-73726089 None:intergenic 25.0%
!!! CTAAATTGATGATGAGTTTA+AGG + chr6_4:73726112-73726131 None:intergenic 25.0%
! AGTTTCTCTCTTTAAATCTA+AGG - chr6_4:73726181-73726200 Msa0996080:CDS 25.0%
!!! AAGTCTTGATTTTGAGTTAT+TGG - chr6_4:73726270-73726289 Msa0996080:CDS 25.0%
!!! AGTCTTGATTTTGAGTTATT+GGG - chr6_4:73726271-73726290 Msa0996080:CDS 25.0%
!!! TTTGATCTTTGAAACTTGTT+TGG - chr6_4:73726316-73726335 Msa0996080:intron 25.0%
!!! CAAGTTTCTTTTTTGAAGAA+AGG - chr6_4:73726515-73726534 Msa0996080:intron 25.0%
! TTTGTTCAATTATGCAGAAT+CGG - chr6_4:73726766-73726785 Msa0996080:intron 25.0%
!! TGTACATCTAAAATGATTTC+GGG + chr6_4:73727239-73727258 None:intergenic 25.0%
!! GTGTACATCTAAAATGATTT+CGG + chr6_4:73727240-73727259 None:intergenic 25.0%
!! ACACAAAAGCTTAATTTTTC+TGG + chr6_4:73727265-73727284 None:intergenic 25.0%
! TTAAACGACATTAAACATAG+AGG + chr6_4:73728099-73728118 None:intergenic 25.0%
! ACTTCTTACTAAAAAGAACA+AGG - chr6_4:73728317-73728336 Msa0996080:intron 25.0%
!! GTTTTTCACATCAATTATCT+TGG - chr6_4:73728540-73728559 Msa0996080:intron 25.0%
! GAAATACAAACCAACATTAA+AGG + chr6_4:73728750-73728769 None:intergenic 25.0%
! CTCAATACTACCAATTTATA+CGG - chr6_4:73728797-73728816 Msa0996080:CDS 25.0%
! TAAGTATGTACTTGATTTCT+AGG - chr6_4:73728878-73728897 Msa0996080:CDS 25.0%
!!! TGTTATTTTTCTTGCTCTAA+GGG - chr6_4:73729046-73729065 Msa0996080:CDS 25.0%
!!! TCTTTTGAAATGATAGAACT+TGG + chr6_4:73729397-73729416 None:intergenic 25.0%
! TTCATCATAAATGTATGCAA+AGG + chr6_4:73729729-73729748 None:intergenic 25.0%
ATGTTTCAAGGATTGTTTGT+GGG + chr6_4:73724745-73724764 None:intergenic 30.0%
ATGATGTTGATCATGTTTCA+AGG + chr6_4:73724757-73724776 None:intergenic 30.0%
TTTGAAGAAAAAATTGCTGG+AGG + chr6_4:73724810-73724829 None:intergenic 30.0%
CTGTTTGAAGAAAAAATTGC+TGG + chr6_4:73724813-73724832 None:intergenic 30.0%
GTCTCTACAACTATTTATAG+AGG - chr6_4:73724864-73724883 Msa0996080:three_prime_UTR 30.0%
ACATAATTGGAGGTTTATTG+AGG + chr6_4:73724957-73724976 None:intergenic 30.0%
! ATCGAGTTGTATGACATAAT+TGG + chr6_4:73724970-73724989 None:intergenic 30.0%
! ACGTGGTTAAATAGTCATTT+TGG + chr6_4:73725185-73725204 None:intergenic 30.0%
! AGTTGAAGAAATCACCATTT+TGG + chr6_4:73725370-73725389 None:intergenic 30.0%
!!! CTAGGTGTGATGTTTTTTTA+AGG + chr6_4:73725488-73725507 None:intergenic 30.0%
! TCTTTTGGTATAGAATTCTC+TGG + chr6_4:73725569-73725588 None:intergenic 30.0%
!! AATGATGAGTTGATGTTAGA+TGG - chr6_4:73725608-73725627 Msa0996080:intron 30.0%
CAAATAGGATCTTGATATTG+CGG - chr6_4:73725817-73725836 Msa0996080:intron 30.0%
AATAAGACTAAGTGCATGTT+TGG - chr6_4:73725853-73725872 Msa0996080:intron 30.0%
! ATTTTGCAAAAGCTACATCA+GGG + chr6_4:73725914-73725933 None:intergenic 30.0%
GCACCATATTGAAACTATAT+AGG - chr6_4:73726064-73726083 Msa0996080:CDS 30.0%
TATACTCTCATCCATCAATT+TGG + chr6_4:73726149-73726168 None:intergenic 30.0%
!! AGCAGAGAATGATAGTTTTA+AGG + chr6_4:73726495-73726514 None:intergenic 30.0%
! TTTAGATCTTTTGTGTTTGG+TGG - chr6_4:73726597-73726616 Msa0996080:intron 30.0%
CTGTTGCAATTGAAATATCT+TGG - chr6_4:73726667-73726686 Msa0996080:intron 30.0%
!! TCAGTACTTTCAAGTTTCAA+GGG + chr6_4:73726728-73726747 None:intergenic 30.0%
!! ATCAGTACTTTCAAGTTTCA+AGG + chr6_4:73726729-73726748 None:intergenic 30.0%
!!! TAGCTGGTTTAGCTTTTAAA+AGG - chr6_4:73726886-73726905 Msa0996080:intron 30.0%
!!! GTTTAGCTTTTAAAAGGAAG+TGG - chr6_4:73726892-73726911 Msa0996080:intron 30.0%
ACTATGTTAGGCTTATCATA+TGG + chr6_4:73726945-73726964 None:intergenic 30.0%
TGTATGTTTGGATAAGTAGT+GGG - chr6_4:73727078-73727097 Msa0996080:intron 30.0%
! TTTTGACAAAAGCTACACTT+TGG + chr6_4:73727144-73727163 None:intergenic 30.0%
TAAGAAACTACACATGACTT+TGG + chr6_4:73727346-73727365 None:intergenic 30.0%
ACAATATGCAAAACCACATA+CGG + chr6_4:73727380-73727399 None:intergenic 30.0%
TTGTTATGAAATGCAATAGC+AGG - chr6_4:73727396-73727415 Msa0996080:intron 30.0%
ACACTTCTGATCAAAATTGT+CGG - chr6_4:73727517-73727536 Msa0996080:CDS 30.0%
ACAGAATTCATAAGCTATCA+TGG + chr6_4:73727942-73727961 None:intergenic 30.0%
! TAGAGGTATAATGATCTGTT+TGG + chr6_4:73728082-73728101 None:intergenic 30.0%
GTCGTTTAAATATACTACAC+AGG - chr6_4:73728110-73728129 Msa0996080:intron 30.0%
AATATACTACACAGGTTTGT+TGG - chr6_4:73728118-73728137 Msa0996080:intron 30.0%
! ATATACTACACAGGTTTGTT+GGG - chr6_4:73728119-73728138 Msa0996080:intron 30.0%
! ACATTGATACTTTTCACCAA+CGG + chr6_4:73728438-73728457 None:intergenic 30.0%
!! GTGAAAAGTATCAATGTTAG+CGG - chr6_4:73728441-73728460 Msa0996080:intron 30.0%
ATGTGAAAAACAAGATCATC+CGG + chr6_4:73728531-73728550 None:intergenic 30.0%
TCAATCACATGTATTACCTT+TGG + chr6_4:73728598-73728617 None:intergenic 30.0%
! GTTTTTCTTCCCTTTAATGT+TGG - chr6_4:73728737-73728756 Msa0996080:CDS 30.0%
CTTAGAGCAAGAAAAATAAC+AGG + chr6_4:73729047-73729066 None:intergenic 30.0%
!!! CTGTTATTTTTCTTGCTCTA+AGG - chr6_4:73729045-73729064 Msa0996080:CDS 30.0%
! AAATGTGATGGAAAATTGCT+TGG - chr6_4:73729075-73729094 Msa0996080:CDS 30.0%
! AAGGTTTAAAATTGTCTCCA+AGG - chr6_4:73729138-73729157 Msa0996080:intron 30.0%
AGAAAAAGTTGTGAATCTCT+TGG - chr6_4:73729363-73729382 Msa0996080:five_prime_UTR 30.0%
!! TTCCATTGTTGCTTTATCTA+TGG - chr6_4:73729631-73729650 Msa0996080:five_prime_UTR 30.0%
ATATATAGATGCATGGACAT+TGG + chr6_4:73729667-73729686 None:intergenic 30.0%
ATGGTTCATATATAGATGCA+TGG + chr6_4:73729674-73729693 None:intergenic 30.0%
CATGTTTCAAGGATTGTTTG+TGG + chr6_4:73724746-73724765 None:intergenic 35.0%
TCATAAACTAATCCACACTG+AGG - chr6_4:73724773-73724792 Msa0996080:three_prime_UTR 35.0%
GAGTTGTATGACATAATTGG+AGG + chr6_4:73724967-73724986 None:intergenic 35.0%
CAAGCTACATTATGTGTCAT+AGG + chr6_4:73725014-73725033 None:intergenic 35.0%
! GATGAGGTGACAAATGTTTT+AGG + chr6_4:73725041-73725060 None:intergenic 35.0%
CAAAGATCATTGTAACAACG+AGG - chr6_4:73725145-73725164 Msa0996080:CDS 35.0%
TAAGAATAAGTGATCACACG+TGG + chr6_4:73725202-73725221 None:intergenic 35.0%
CGTGTGATCACTTATTCTTA+AGG - chr6_4:73725202-73725221 Msa0996080:CDS 35.0%
GATCACTTATTCTTAAGGAG+TGG - chr6_4:73725207-73725226 Msa0996080:CDS 35.0%
ACTGATCTTTGTGAAGATAG+AGG + chr6_4:73725270-73725289 None:intergenic 35.0%
!! GAAGAAATCACCATTTTGGT+TGG + chr6_4:73725366-73725385 None:intergenic 35.0%
!! ATGTTCTCGTTTTGTTCATC+TGG + chr6_4:73725402-73725421 None:intergenic 35.0%
AAGAAAGGGAACACTTACTT+TGG + chr6_4:73725465-73725484 None:intergenic 35.0%
! ATCTGATATGCTGCATCTTT+TGG + chr6_4:73725584-73725603 None:intergenic 35.0%
TGATGTTAGATGGAAAACCA+AGG - chr6_4:73725618-73725637 Msa0996080:intron 35.0%
TTCATTTGTGACTACTTGGA+TGG - chr6_4:73725652-73725671 Msa0996080:CDS 35.0%
ATGATAAGCTTATCACACTC+AGG + chr6_4:73725680-73725699 None:intergenic 35.0%
TGAGTGTGATAAGCTTATCA+TGG - chr6_4:73725679-73725698 Msa0996080:intron 35.0%
! GATTTTGCAAAAGCTACATC+AGG + chr6_4:73725915-73725934 None:intergenic 35.0%
ATCAATTTGGTCTCTACTCA+AGG + chr6_4:73726136-73726155 None:intergenic 35.0%
TTGAGTAGAGACCAAATTGA+TGG - chr6_4:73726135-73726154 Msa0996080:CDS 35.0%
AAAGTCTGCAACCACAATTT+GGG + chr6_4:73726242-73726261 None:intergenic 35.0%
AAAAGTCTGCAACCACAATT+TGG + chr6_4:73726243-73726262 None:intergenic 35.0%
! TTGGTGGTTGGATGAAAATT+TGG - chr6_4:73726613-73726632 Msa0996080:intron 35.0%
CATCTATTCAATGCTCCTAT+TGG - chr6_4:73726807-73726826 Msa0996080:intron 35.0%
CAGACTAAGAGAAAATCAGA+AGG - chr6_4:73726915-73726934 Msa0996080:intron 35.0%
GATAAGCCTAACATAGTTAC+TGG - chr6_4:73726948-73726967 Msa0996080:intron 35.0%
TTAGCTCCAGTAACTATGTT+AGG + chr6_4:73726957-73726976 None:intergenic 35.0%
GTGTATGTTTGGATAAGTAG+TGG - chr6_4:73727077-73727096 Msa0996080:intron 35.0%
CAGTGAGATTGACAAAATCA+CGG + chr6_4:73727179-73727198 None:intergenic 35.0%
TGTTGTCTAATGTGTCCTTT+AGG - chr6_4:73727282-73727301 Msa0996080:intron 35.0%
!! ATTTTGATCAGAAGTGTGTG+TGG + chr6_4:73727514-73727533 None:intergenic 35.0%
GCACAGACAAATTTGATCAA+AGG + chr6_4:73727581-73727600 None:intergenic 35.0%
CAAATTTGTCTGTGCTTCAT+AGG - chr6_4:73727586-73727605 Msa0996080:CDS 35.0%
TTAGTGGGATATGTATGTAG+TGG + chr6_4:73727626-73727645 None:intergenic 35.0%
!! ATGAACAAAGCTTTGAGACA+GGG + chr6_4:73727695-73727714 None:intergenic 35.0%
!! AATGAACAAAGCTTTGAGAC+AGG + chr6_4:73727696-73727715 None:intergenic 35.0%
!! TCAAAGCTTTGTTCATTCTC+AGG - chr6_4:73727699-73727718 Msa0996080:intron 35.0%
!! CAAAGCTTTGTTCATTCTCA+GGG - chr6_4:73727700-73727719 Msa0996080:intron 35.0%
!! AAAGCTTTGTTCATTCTCAG+GGG - chr6_4:73727701-73727720 Msa0996080:intron 35.0%
TTGATTCTACAATACTAGGC+TGG + chr6_4:73727759-73727778 None:intergenic 35.0%
AAACAGTTTCACAAGTGTCT+AGG + chr6_4:73727876-73727895 None:intergenic 35.0%
TAGACACTTGTGAAACTGTT+TGG - chr6_4:73727875-73727894 Msa0996080:intron 35.0%
AGACACTTGTGAAACTGTTT+GGG - chr6_4:73727876-73727895 Msa0996080:intron 35.0%
TTTGTTGGGAAAAATTTGCC+AGG - chr6_4:73728133-73728152 Msa0996080:intron 35.0%
AAAATTTGCCAGGTACTTTG+AGG - chr6_4:73728143-73728162 Msa0996080:intron 35.0%
TCCATTGAAAGCTGTTGAAA+TGG - chr6_4:73728212-73728231 Msa0996080:intron 35.0%
ACCATTTCAACAGCTTTCAA+TGG + chr6_4:73728216-73728235 None:intergenic 35.0%
ACTAAAAAGAACAAGGAGAC+AGG - chr6_4:73728324-73728343 Msa0996080:intron 35.0%
!! ATGATTTGACTTGATCCTGT+CGG + chr6_4:73728775-73728794 None:intergenic 35.0%
TACTACCAATTTATACGGCT+TGG - chr6_4:73728802-73728821 Msa0996080:CDS 35.0%
TAAGGGCTACAAAAATGTGA+TGG - chr6_4:73729063-73729082 Msa0996080:CDS 35.0%
! AACACAAGAATTCTGAAGGA+AGG - chr6_4:73729100-73729119 Msa0996080:five_prime_UTR 35.0%
AAGGAAGGAATTGAGAAAAC+AGG - chr6_4:73729115-73729134 Msa0996080:intron 35.0%
AAGGAATTGAGAAAACAGGA+AGG - chr6_4:73729119-73729138 Msa0996080:intron 35.0%
AAAATTGTCTCCAAGGACAT+AGG - chr6_4:73729145-73729164 Msa0996080:intron 35.0%
GCAGATCATCTGAGAAAATA+CGG - chr6_4:73729226-73729245 Msa0996080:five_prime_UTR 35.0%
CAGATCATCTGAGAAAATAC+GGG - chr6_4:73729227-73729246 Msa0996080:five_prime_UTR 35.0%
TTCAAAAGATGCTCATGTTG+CGG - chr6_4:73729408-73729427 Msa0996080:five_prime_UTR 35.0%
ATGCTGAGATTCTTAGGTAT+TGG - chr6_4:73729482-73729501 Msa0996080:five_prime_UTR 35.0%
!! TAGGTATTGGAAGAAACTTG+TGG - chr6_4:73729495-73729514 Msa0996080:five_prime_UTR 35.0%
TATTGGAAGAAACTTGTGGA+TGG - chr6_4:73729499-73729518 Msa0996080:five_prime_UTR 35.0%
AAGCAACTCACAACAATCAA+GGG + chr6_4:73729575-73729594 None:intergenic 35.0%
AAAGCAACTCACAACAATCA+AGG + chr6_4:73729576-73729595 None:intergenic 35.0%
GCATACATTTGATGTGTGTA+AGG - chr6_4:73729604-73729623 Msa0996080:five_prime_UTR 35.0%
CTCCATAGATAAAGCAACAA+TGG + chr6_4:73729636-73729655 None:intergenic 35.0%
GTTTGTGGGTGAAGTAGATT+TGG + chr6_4:73724731-73724750 None:intergenic 40.0%
AATCCACACTGAGGACAAAA+AGG - chr6_4:73724782-73724801 Msa0996080:three_prime_UTR 40.0%
TTGCTCATTCGTCAAGAAGT+GGG - chr6_4:73724924-73724943 Msa0996080:CDS 40.0%
AAAACTGTTGTCGATCGATG+AGG + chr6_4:73725057-73725076 None:intergenic 40.0%
CAGAACTCATCCAACCAAAA+TGG - chr6_4:73725353-73725372 Msa0996080:CDS 40.0%
TGGAAAACCAAGGCTTAACT+TGG - chr6_4:73725628-73725647 Msa0996080:intron 40.0%
AATGAAGCCAAGTTAAGCCT+TGG + chr6_4:73725638-73725657 None:intergenic 40.0%
TGGCTTCATTTGTGACTACT+TGG - chr6_4:73725648-73725667 Msa0996080:CDS 40.0%
TAAACAAACCTGAAGCTCAG+TGG + chr6_4:73725750-73725769 None:intergenic 40.0%
TTATGGTTGCGATCGCAAAT+AGG - chr6_4:73725802-73725821 Msa0996080:intron 40.0%
!! TTTATGGTGTTGCAGCTGTT+TGG - chr6_4:73725980-73725999 Msa0996080:CDS 40.0%
TCTAAATCTGACGATCGTCT+AGG - chr6_4:73726035-73726054 Msa0996080:CDS 40.0%
CTAAATCTGACGATCGTCTA+GGG - chr6_4:73726036-73726055 Msa0996080:CDS 40.0%
!! GATCTTTTGTGTTTGGTGGT+TGG - chr6_4:73726601-73726620 Msa0996080:intron 40.0%
ACAAAATCACGATACTGTCG+TGG + chr6_4:73727114-73727133 None:intergenic 40.0%
TGCCAATCCAAACATGCTTT+GGG - chr6_4:73727197-73727216 Msa0996080:intron 40.0%
ATTTCCTCCCAAAGCATGTT+TGG + chr6_4:73727207-73727226 None:intergenic 40.0%
! TTTGGAAGCACACATTCGAA+CGG + chr6_4:73727328-73727347 None:intergenic 40.0%
TAGAAAAGTTGCTCCGTATG+TGG - chr6_4:73727364-73727383 Msa0996080:intron 40.0%
! AATTTGATCAAAGGCGTGTG+CGG + chr6_4:73727572-73727591 None:intergenic 40.0%
GCTTTATGATTCACATTGCC+TGG - chr6_4:73727731-73727750 Msa0996080:intron 40.0%
! GCGATTGATGTGTCGTATTT+TGG - chr6_4:73727796-73727815 Msa0996080:intron 40.0%
CAAATAAACCAGTCCAAGCA+GGG + chr6_4:73727838-73727857 None:intergenic 40.0%
TCAAATAAACCAGTCCAAGC+AGG + chr6_4:73727839-73727858 None:intergenic 40.0%
AAGCTATCATGGAGAGCTTA+TGG + chr6_4:73727931-73727950 None:intergenic 40.0%
!! GTACTTTGAGGTTGAGCTAA+AGG - chr6_4:73728155-73728174 Msa0996080:intron 40.0%
AAAGGAAGTGAAACTCACAG+AGG - chr6_4:73728173-73728192 Msa0996080:intron 40.0%
CACAGAGGATTACTATGTGA+TGG - chr6_4:73728188-73728207 Msa0996080:intron 40.0%
!! ATCTGTGTTGCAGCCATTTT+GGG - chr6_4:73728249-73728268 Msa0996080:intron 40.0%
AAAAGAACAAGGAGACAGGA+TGG - chr6_4:73728328-73728347 Msa0996080:intron 40.0%
AAAGAACAAGGAGACAGGAT+GGG - chr6_4:73728329-73728348 Msa0996080:intron 40.0%
AGAAGATCAGGGTAGAGAAA+TGG + chr6_4:73728399-73728418 None:intergenic 40.0%
TTCTCTACCCTGATCTTCTA+TGG - chr6_4:73728400-73728419 Msa0996080:intron 40.0%
TCTCTACCCTGATCTTCTAT+GGG - chr6_4:73728401-73728420 Msa0996080:intron 40.0%
GGAAATCCCATAGAAGATCA+GGG + chr6_4:73728410-73728429 None:intergenic 40.0%
! TACTTTTCACCAACGGCAAA+CGG + chr6_4:73728431-73728450 None:intergenic 40.0%
AATGTTAGCGGTCACAAGTA+CGG - chr6_4:73728453-73728472 Msa0996080:intron 40.0%
!! TTGTTTACCCTGGTATTGGT+TGG - chr6_4:73728478-73728497 Msa0996080:intron 40.0%
!! TGTTTACCCTGGTATTGGTT+GGG - chr6_4:73728479-73728498 Msa0996080:intron 40.0%
AAACAACCCAACCAATACCA+GGG + chr6_4:73728488-73728507 None:intergenic 40.0%
! TGGTTTGTATTTCTTCCGAC+AGG - chr6_4:73728757-73728776 Msa0996080:CDS 40.0%
CGAAACCAAGCCGTATAAAT+TGG + chr6_4:73728810-73728829 None:intergenic 40.0%
!! ATTTATACGGCTTGGTTTCG+AGG - chr6_4:73728810-73728829 Msa0996080:CDS 40.0%
ATCATCTGAGAAAATACGGG+TGG - chr6_4:73729230-73729249 Msa0996080:five_prime_UTR 40.0%
AAAATACGGGTGGATAGTTC+CGG - chr6_4:73729240-73729259 Msa0996080:five_prime_UTR 40.0%
AATCTTCCCTAATCACCACT+CGG + chr6_4:73729306-73729325 None:intergenic 40.0%
AGACTCATGCTGAGATTCTT+AGG - chr6_4:73729476-73729495 Msa0996080:five_prime_UTR 40.0%
! GATCCTTTTTGTCCTCAGTG+TGG + chr6_4:73724788-73724807 None:intergenic 45.0%
ACGAATGAGCAACGCTATGT+TGG + chr6_4:73724916-73724935 None:intergenic 45.0%
GTTGCTCATTCGTCAAGAAG+TGG - chr6_4:73724923-73724942 Msa0996080:exon 45.0%
TTCTAGATACGTGCGTGAAC+AGG - chr6_4:73725437-73725456 Msa0996080:intron 45.0%
GTATTGTGATGCAGTCGTAG+AGG + chr6_4:73726208-73726227 None:intergenic 45.0%
CAATGCTCCTATTGGTGAAG+AGG - chr6_4:73726815-73726834 Msa0996080:intron 45.0%
GCAGTTTCCTCTTCACCAAT+AGG + chr6_4:73726825-73726844 None:intergenic 45.0%
!! CAGTAGGTGTTGGAACTGTA+GGG - chr6_4:73726844-73726863 Msa0996080:intron 45.0%
TCAGAGGCAATAATGCTAGC+TGG - chr6_4:73726870-73726889 Msa0996080:intron 45.0%
AGTTACTGGAGCTAATGTGC+AGG - chr6_4:73726962-73726981 Msa0996080:intron 45.0%
CTGCCAATCCAAACATGCTT+TGG - chr6_4:73727196-73727215 Msa0996080:intron 45.0%
CTCCCAAAGCATGTTTGGAT+TGG + chr6_4:73727202-73727221 None:intergenic 45.0%
! CAATCCAAACATGCTTTGGG+AGG - chr6_4:73727200-73727219 Msa0996080:intron 45.0%
CAATAGCAGGTCTGAACCAA+AGG - chr6_4:73727409-73727428 Msa0996080:intron 45.0%
GTCCATACTTCATAAGCCGA+AGG + chr6_4:73727462-73727481 None:intergenic 45.0%
GGCTTATGAAGTATGGACAC+CGG - chr6_4:73727464-73727483 Msa0996080:intron 45.0%
AACATCGTCCATTTCGTGTC+CGG + chr6_4:73727486-73727505 None:intergenic 45.0%
!! ATGTAGTGGATGAGTGTAGC+AGG + chr6_4:73727612-73727631 None:intergenic 45.0%
! TAGCTCAACCTCAAAGTACC+TGG + chr6_4:73728154-73728173 None:intergenic 45.0%
CAAAATGGCTGCAACACAGA+TGG + chr6_4:73728250-73728269 None:intergenic 45.0%
! CATCTGTGTTGCAGCCATTT+TGG - chr6_4:73728248-73728267 Msa0996080:intron 45.0%
!!! ATTTTGGGTTCAACGCTGAC+CGG - chr6_4:73728264-73728283 Msa0996080:intron 45.0%
CTTCACATCCTCAAACTCTC+CGG + chr6_4:73728286-73728305 None:intergenic 45.0%
CTCGCAGCATCTACATGAAT+CGG + chr6_4:73728360-73728379 None:intergenic 45.0%
ATTCATGTAGATGCTGCGAG+TGG - chr6_4:73728360-73728379 Msa0996080:intron 45.0%
CGGAAATCCCATAGAAGATC+AGG + chr6_4:73728411-73728430 None:intergenic 45.0%
!! AAGTACGGTCTTGTTTACCC+TGG - chr6_4:73728468-73728487 Msa0996080:intron 45.0%
!! GGTCTTGTTTACCCTGGTAT+TGG - chr6_4:73728474-73728493 Msa0996080:intron 45.0%
CAAACAACCCAACCAATACC+AGG + chr6_4:73728489-73728508 None:intergenic 45.0%
!! CTGGTATTGGTTGGGTTGTT+TGG - chr6_4:73728487-73728506 Msa0996080:intron 45.0%
!! GTATTGGTTGGGTTGTTTGG+AGG - chr6_4:73728490-73728509 Msa0996080:intron 45.0%
! GAGGCATAAAGCTGACTTAC+CGG - chr6_4:73728509-73728528 Msa0996080:intron 45.0%
GGCGAACACAAGAATTCTGA+AGG - chr6_4:73729096-73729115 Msa0996080:five_prime_UTR 45.0%
TTCAGAGAGAAGGCTACAAG+TGG + chr6_4:73729175-73729194 None:intergenic 45.0%
!!! TAAAATTATAAGTTATTTTA+TGG - chr6_4:73725964-73725983 Msa0996080:CDS 5.0%
TGCAGTCGTAGCCCAAATTG+TGG - chr6_4:73726228-73726247 Msa0996080:CDS 50.0%
GGTGAAGAGGAAACTGCAGT+AGG - chr6_4:73726828-73726847 Msa0996080:intron 50.0%
GAGGAAACTGCAGTAGGTGT+TGG - chr6_4:73726834-73726853 Msa0996080:intron 50.0%
!! GCAGTAGGTGTTGGAACTGT+AGG - chr6_4:73726843-73726862 Msa0996080:intron 50.0%
TGGAACTGTAGGGTCATCAG+AGG - chr6_4:73726854-73726873 Msa0996080:intron 50.0%
GCAGGTCTGAACCAAAGGTA+AGG - chr6_4:73727414-73727433 Msa0996080:intron 50.0%
!! GGCTTGTCTAGCCTTACCTT+TGG + chr6_4:73727428-73727447 None:intergenic 50.0%
GCTAGACAAGCCCTTGCTTT+AGG - chr6_4:73727436-73727455 Msa0996080:intron 50.0%
! AAGCCCTTGCTTTAGGCCTT+CGG - chr6_4:73727443-73727462 Msa0996080:intron 50.0%
AAGCCGAAGGCCTAAAGCAA+GGG + chr6_4:73727449-73727468 None:intergenic 50.0%
TAAGCCGAAGGCCTAAAGCA+AGG + chr6_4:73727450-73727469 None:intergenic 50.0%
GGCCTTCGGCTTATGAAGTA+TGG - chr6_4:73727457-73727476 Msa0996080:intron 50.0%
TATGGACACCGGACACGAAA+TGG - chr6_4:73727475-73727494 Msa0996080:intron 50.0%
GGACACGAAATGGACGATGT+TGG - chr6_4:73727485-73727504 Msa0996080:CDS 50.0%
! TACAATACTAGGCTGGCTCC+AGG + chr6_4:73727752-73727771 None:intergenic 50.0%
CAAGCAGGGCTTATGGGAAA+AGG + chr6_4:73727824-73727843 None:intergenic 50.0%
! CTTTTCCCATAAGCCCTGCT+TGG - chr6_4:73727822-73727841 Msa0996080:intron 50.0%
! GGTCAGCGTTGAACCCAAAA+TGG + chr6_4:73728265-73728284 None:intergenic 50.0%
ATGGGATTTCCGTTTGCCGT+TGG - chr6_4:73728419-73728438 Msa0996080:intron 50.0%
AAGTGGCACACCTATGTCCT+TGG + chr6_4:73729158-73729177 None:intergenic 50.0%
CCTAATCACCACTCGGAGAA+CGG + chr6_4:73729299-73729318 None:intergenic 50.0%
CGTTCTCCGAGTGGTGATTA+GGG - chr6_4:73729297-73729316 Msa0996080:five_prime_UTR 50.0%
GGAAGATTTCAGCTGCAGCT+TGG - chr6_4:73729318-73729337 Msa0996080:five_prime_UTR 50.0%
TATCGCGAGTGAGACAAGTG+AGG - chr6_4:73729432-73729451 Msa0996080:five_prime_UTR 50.0%
CTTGTGGATGGCAAGAGAGT+TGG - chr6_4:73729511-73729530 Msa0996080:five_prime_UTR 50.0%
CAAGAGAGTTGGAGCATGCT+AGG - chr6_4:73729522-73729541 Msa0996080:five_prime_UTR 50.0%
TCCTGTCACCACTGAGCTTC+AGG - chr6_4:73725739-73725758 Msa0996080:intron 55.0%
ACCTGAAGCTCAGTGGTGAC+AGG + chr6_4:73725743-73725762 None:intergenic 55.0%
CCAGTCCAAGCAGGGCTTAT+GGG + chr6_4:73727830-73727849 None:intergenic 55.0%
ACCAGTCCAAGCAGGGCTTA+TGG + chr6_4:73727831-73727850 None:intergenic 55.0%
AACGCTGACCGGAGAGTTTG+AGG - chr6_4:73728275-73728294 Msa0996080:intron 55.0%
CATGTAGATGCTGCGAGTGG+CGG - chr6_4:73728363-73728382 Msa0996080:intron 55.0%
ATGTAGATGCTGCGAGTGGC+GGG - chr6_4:73728364-73728383 Msa0996080:intron 55.0%
CCGTTCTCCGAGTGGTGATT+AGG - chr6_4:73729296-73729315 Msa0996080:five_prime_UTR 55.0%
CCCATAAGCCCTGCTTGGAC+TGG - chr6_4:73727827-73727846 Msa0996080:intron 60.0%
TCCGGCCTACACAATGCCAG+CGG - chr6_4:73729258-73729277 Msa0996080:five_prime_UTR 60.0%
TCCGCTGGCATTGTGTAGGC+CGG + chr6_4:73729262-73729281 None:intergenic 60.0%
TGCGTCCGCTGGCATTGTGT+AGG + chr6_4:73729266-73729285 None:intergenic 60.0%
! GCGATGTGTTTTGCGTCCGC+TGG + chr6_4:73729277-73729296 None:intergenic 60.0%
ACACATCGCCGTTCTCCGAG+TGG - chr6_4:73729288-73729307 Msa0996080:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 73724697 73729770 73724697 ID=Msa0996080;Name=Msa0996080
chr6_4 mRNA 73724697 73729770 73724697 ID=Msa0996080-mRNA-1;Parent=Msa0996080;Name=Msa0996080-mRNA-1;_AED=0.25;_eAED=0.25;_QI=655|0.71|0.75|0.87|0.85|0.75|8|227|502
chr6_4 exon 73724697 73725400 73724697 ID=Msa0996080-mRNA-1:exon:13741;Parent=Msa0996080-mRNA-1
chr6_4 exon 73725636 73725688 73725636 ID=Msa0996080-mRNA-1:exon:13740;Parent=Msa0996080-mRNA-1
chr6_4 exon 73725867 73726312 73725867 ID=Msa0996080-mRNA-1:exon:13739;Parent=Msa0996080-mRNA-1
chr6_4 exon 73726745 73726776 73726745 ID=Msa0996080-mRNA-1:exon:13738;Parent=Msa0996080-mRNA-1
chr6_4 exon 73727484 73727684 73727484 ID=Msa0996080-mRNA-1:exon:13737;Parent=Msa0996080-mRNA-1
chr6_4 exon 73728707 73728911 73728707 ID=Msa0996080-mRNA-1:exon:13736;Parent=Msa0996080-mRNA-1
chr6_4 exon 73729001 73729133 73729001 ID=Msa0996080-mRNA-1:exon:13735;Parent=Msa0996080-mRNA-1
chr6_4 exon 73729154 73729770 73729154 ID=Msa0996080-mRNA-1:exon:13734;Parent=Msa0996080-mRNA-1
chr6_4 five_prime_UTR 73729154 73729770 73729154 ID=Msa0996080-mRNA-1:five_prime_utr;Parent=Msa0996080-mRNA-1
chr6_4 five_prime_UTR 73729096 73729133 73729096 ID=Msa0996080-mRNA-1:five_prime_utr;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73729001 73729095 73729001 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73728707 73728911 73728707 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73727484 73727684 73727484 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73726745 73726776 73726745 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73725867 73726312 73725867 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73725636 73725688 73725636 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 CDS 73724924 73725400 73724924 ID=Msa0996080-mRNA-1:cds;Parent=Msa0996080-mRNA-1
chr6_4 three_prime_UTR 73724697 73724923 73724697 ID=Msa0996080-mRNA-1:three_prime_utr;Parent=Msa0996080-mRNA-1
Gene Sequence

>Msa0996080

ATGGTGATTTCTTCAACTGTCACACATCCAGATGAACAAAACGAGAACATAGCATGCACTTTCGCTTCTAGATACGTGCGTGAACAGGTTCCAAAGTTCAAGATGCCAGAGAATTCTATACCAAAAGATGCAGCATATCAGATAATAAATGATGAGTTGATGTTAGATGGAAAACCAAGGCTTAACTTGGCTTCATTTGTGACTACTTGGATGGAACCTGAGTGTGATAAGCTTATCATGGATTCACTTAACAAGAATTATGTTGATATGGATGAATATCCTGTCACCACTGAGCTTCAGAATCGGTGTGTGAATATAATAGCACATCTATTCAATGCTCCTATTGGTGAAGAGGAAACTGCAGTAGGTGTTGGAACTGTAGGGTCATCAGAGGCAATAATGCTAGCTGGTTTAGCTTTTAAAAGGAAGTGGCAGACTAAGAGAAAATCAGAAGGCAAACCATATGATAAGCCTAACATAGTTACTGGAGCTAATGTGCAGACCCTGTCTCAAAGCTTTGTTCATTCTCAGGGGTACTTTGAGGTTGAGCTAAAGGAAGTGAAACTCACAGAGGATTACTATGTGATGGATCCATTGAAAGCTGTTGAAATGGTAGATGAGAACACCATCTGTGTTGCAGCCATTTTGGGTTCAACGCTGACCGGAGAGTTTGAGGATGTGAAGCTTCTCAACGAACTTCTTACTAAAAAGAACAAGGAGACAGGATGGGATACACCGATTCATGTAGATGCTGCGAGTGGCGGGTTTGTTGCTCCATTTCTCTACCCTGATCTTCTATGGGATTTCCGTTTGCCGTTGGTGAAAAGTATCAATGTTAGCGGTCACAAGTACGGTCTTGTTTACCCTGGTATTGGTTGGGTTGTTTGGAGGCATAAAGCTGACTTACCGGATGATCTTGTTTTTCACATCAATTATCTTGGATCTGATCAGCCAACTTTCACATTAAATTTTTCCAAAGGATCAAGTCAAATCATTGCTCAATACTACCAATTTATACGGCTTGGTTTCGAGGGCTACAAAAATGTGATGGAAAATTGCTTGGCGAACACAAGAATTCTGAAGGAAGGAATTGAGAAAACAGGAAGGTTTAAAATTGTCTCCAAGGACATAGGTGTGCCACTTGTAGCCTTCTCTCTGAAAGACAGCAGCAAGCACACTGTTTTTGAAATAGCAGATCATCTGAGAAAATACGGGTGGATAGTTCCGGCCTACACAATGCCAGCGGACGCAAAACACATCGCCGTTCTCCGAGTGGTGATTAGGGAAGATTTCAGCTGCAGCTTGGCTGAAAGACTTGTTTCTGACATAGAAAAAGTTGTGAATCTCTTGGACACACTTCCAAGTTCTATCATTTCAAAAGATGCTCATGTTGCGGTTATCGCGAGTGAGACAAGTGAGGAAGTTAATAAAGATATTACTGAGACTCATGCTGAGATTCTTAGGTATTGGAAGAAACTTGTGGATGGCAAGAGAGTTGGAGCATGCTAG

Protein sequence

>Msa0996080

MVISSTVTHPDEQNENIACTFASRYVREQVPKFKMPENSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGEEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQTLSQSFVHSQGYFEVELKEVKLTEDYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWDTPIHVDAASGGFVAPFLYPDLLWDFRLPLVKSINVSGHKYGLVYPGIGWVVWRHKADLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCLANTRILKEGIEKTGRFKIVSKDIGVPLVAFSLKDSSKHTVFEIADHLRKYGWIVPAYTMPADAKHIAVLRVVIREDFSCSLAERLVSDIEKVVNLLDTLPSSIISKDAHVAVIASETSEEVNKDITETHAEILRYWKKLVDGKRVGAC*