AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0996090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996090 MtrunA17_Chr6g0480631 98.597 499 7 0 1 499 1 499 0.0 1024
Msa0996090 MtrunA17_Chr3g0109901 74.364 511 116 4 1 499 1 508 0.0 785
Msa0996090 MtrunA17_Chr8g0375301 70.913 471 128 2 12 473 9 479 0.0 701
Msa0996090 MtrunA17_Chr5g0433931 69.682 409 116 2 99 499 1 409 0.0 599
Msa0996090 MtrunA17_Chr5g0433921 79.000 100 18 1 1 100 1 97 1.33e-49 165
Msa0996090 MtrunA17_Chr7g0222381 26.039 361 237 11 86 436 159 499 4.62e-20 93.2
Msa0996090 MtrunA17_Chr5g0432951 76.923 39 9 0 255 293 15 53 3.34e-15 71.2
Msa0996090 MtrunA17_Chr5g0432961 52.174 69 33 0 375 443 13 81 2.06e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0996090 AT2G02010.1 77.778 495 101 2 1 495 1 486 0.0 812
Msa0996090 AT2G02010.2 77.778 495 101 2 1 495 53 538 0.0 811
Msa0996090 AT5G17330.1 76.031 509 105 4 1 499 1 502 0.0 793
Msa0996090 AT3G17760.2 77.800 491 102 3 12 499 8 494 0.0 793
Msa0996090 AT3G17760.1 77.800 491 102 3 12 499 8 494 0.0 793
Msa0996090 AT1G65960.2 76.447 501 109 4 1 499 1 494 0.0 784
Msa0996090 AT2G02000.1 74.899 494 115 2 1 494 1 485 0.0 783
Msa0996090 AT1G65960.1 76.087 368 83 3 134 499 1 365 0.0 572
Msa0996090 AT1G65960.3 76.087 368 83 3 134 499 1 365 0.0 572
Msa0996090 AT1G65960.4 76.087 368 83 3 134 499 1 365 0.0 572
Msa0996090 AT3G17720.1 74.074 162 39 1 94 255 27 185 1.18e-82 254
Msa0996090 AT1G27980.1 24.586 362 241 11 84 434 160 500 1.14e-16 83.2

Find 110 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTGTGTTGCAGCCATTT+TGG 0.165886 6_4:-73731826 Msa0996090:CDS
CTGGTATTGGTTGGGTTGTT+TGG 0.223066 6_4:-73731587 Msa0996090:CDS
TTCTCTACCCTGATCTTCTA+TGG 0.227683 6_4:-73731674 Msa0996090:CDS
TTCATTCATTCATATAAATA+TGG 0.237410 6_4:+73730391 None:intergenic
CTCAATACTACCAATTTATA+CGG 0.248455 6_4:-73731266 Msa0996090:CDS
AGTTGAAGAAATCACCATTT+TGG 0.255929 6_4:+73734975 None:intergenic
ATCTGATATGCTGCATCTTT+TGG 0.270173 6_4:+73734760 None:intergenic
TCCTGTCACCACTGAGCTTC+AGG 0.282193 6_4:-73734602 Msa0996090:intron
TAACAAGAATTATGTTGATA+TGG 0.304779 6_4:-73734632 Msa0996090:CDS
CTGTCCTCCGAGTGGTGATT+AGG 0.312016 6_4:-73730786 Msa0996090:CDS
CGAAGCCAAGCCGTATAAAT+TGG 0.316347 6_4:+73731256 None:intergenic
AGACTCACGCTGAGATTCTT+AGG 0.331003 6_4:-73730606 Msa0996090:CDS
GGTCAACGTTGAACCCAAAA+TGG 0.345320 6_4:+73731812 None:intergenic
AATATACTACGCAGGTTTGT+TGG 0.347834 6_4:-73731956 Msa0996090:intron
TTCTAGATACGTGCGTGAAC+AGG 0.356943 6_4:-73734905 Msa0996090:CDS
CGGAAATCCCATAGAAGATC+AGG 0.359620 6_4:+73731666 None:intergenic
GGTCTTGTTTACCCTGGTAT+TGG 0.363471 6_4:-73731600 Msa0996090:CDS
ACGCTGAGATTCTTAGGTAT+TGG 0.370826 6_4:-73730600 Msa0996090:CDS
GAGGCATAAAGCTGACTTGC+CGG 0.372412 6_4:-73731565 Msa0996090:CDS
AATGATGAGTTGATGTTAGA+TGG 0.378531 6_4:-73734733 Msa0996090:CDS
TGGCTTCATTTGTTACTACT+TGG 0.383718 6_4:-73734693 Msa0996090:CDS
GATAAGCCGAACATAGTTAC+TGG 0.387111 6_4:-73733193 Msa0996090:CDS
CAGAACTCATCCAACCAAAA+TGG 0.395608 6_4:-73734989 Msa0996090:exon
CTCGCAGCATCTACATGAAT+TGG 0.399331 6_4:+73731717 None:intergenic
ATATACTACGCAGGTTTGTT+GGG 0.407652 6_4:-73731955 Msa0996090:intron
ACCATTTCAACAGCTTTCAA+TGG 0.408300 6_4:+73731861 None:intergenic
ACTATGTTCGGCTTATCATA+TGG 0.412421 6_4:+73733199 None:intergenic
TACTACCAATTTATACGGCT+TGG 0.415144 6_4:-73731261 Msa0996090:CDS
AAAATTTGCTAGGTACTTTG+AGG 0.418983 6_4:-73731931 Msa0996090:CDS
TGTCCTCCGAGTGGTGATTA+GGG 0.420453 6_4:-73730785 Msa0996090:CDS
TTGTTTACCCTGGTATTGGT+TGG 0.425703 6_4:-73731596 Msa0996090:CDS
AAAATACGGGTGGATAGTTC+CGG 0.431504 6_4:-73730842 Msa0996090:CDS
TGTTTACCCTGGTATTGGTT+GGG 0.431991 6_4:-73731595 Msa0996090:CDS
GCAGACCATTTGAGAAAATA+CGG 0.437901 6_4:-73730856 Msa0996090:CDS
GTACTTTGAGGTTGAGCTAA+AGG 0.439469 6_4:-73731919 Msa0996090:CDS
GAGAAATTCAATGTGAAAGT+TGG 0.439670 6_4:+73731501 None:intergenic
AAGGAAGGAATTGAGAAAAC+AGG 0.440850 6_4:-73730967 Msa0996090:CDS
ATTTATACGGCTTGGCTTCG+AGG 0.445868 6_4:-73731253 Msa0996090:intron
TTCATTTGTTACTACTTGGA+TGG 0.447228 6_4:-73734689 Msa0996090:CDS
TGGAAAACCAAGGCTTAACT+TGG 0.451331 6_4:-73734713 Msa0996090:CDS
TCTCTACCCTGATCTTCTAT+GGG 0.463816 6_4:-73731673 Msa0996090:CDS
TTAGCTCCAGTAACTATGTT+CGG 0.470040 6_4:+73733187 None:intergenic
GTATTGGTTGGGTTGTTTGG+AGG 0.473665 6_4:-73731584 Msa0996090:CDS
AATGAAGCCAAGTTAAGCCT+TGG 0.475959 6_4:+73734706 None:intergenic
GCAGTAGGTGTTGGAACTGT+AGG 0.480901 6_4:-73733298 Msa0996090:CDS
CAAGAGAGTTGGAGCATGCT+AGG 0.485182 6_4:-73730560 Msa0996090:exon
AACGTTGACCGGAGAGTTTG+AGG 0.489514 6_4:-73731799 Msa0996090:CDS
CAAACAACCCAACCAATACC+AGG 0.491052 6_4:+73731588 None:intergenic
TCCATTGAAAGCTGTTGAAA+TGG 0.494508 6_4:-73731862 Msa0996090:CDS
AAAGCAACTCACAACAATCA+AGG 0.494924 6_4:+73730509 None:intergenic
AAAATTGTCTCCAAGGACAT+AGG 0.500052 6_4:-73730937 Msa0996090:CDS
ATGGGATTTCCGTTTGCCGT+TGG 0.504123 6_4:-73731655 Msa0996090:CDS
TGCGTCCGCTGGCATTGTGT+AGG 0.512284 6_4:+73730819 None:intergenic
CTTGTGGATGGCAAGAGAGT+TGG 0.513748 6_4:-73730571 Msa0996090:CDS
ACCTGAAGCTCAGTGGTGAC+AGG 0.517726 6_4:+73734601 None:intergenic
AAGGTTTAAAATTGTCTCCA+AGG 0.518110 6_4:-73730944 Msa0996090:CDS
CTCTATAGATAAAGCAACAA+TGG 0.519790 6_4:+73730444 None:intergenic
TCCGCTGGCATTGTGTAGGC+CGG 0.520444 6_4:+73730823 None:intergenic
ACTGATCTTTGTGAAGATAG+AGG 0.525765 6_4:+73735055 None:intergenic
AAGTGGCACACCTATGTCCT+TGG 0.528819 6_4:+73730927 None:intergenic
TGAGTGTGATAAGCTTATCA+TGG 0.535116 6_4:-73734662 Msa0996090:CDS
GCTGCTGTCTTTCAGAGAGA+AGG 0.536335 6_4:+73730900 None:intergenic
AGAAGATCAGGGTAGAGAAA+CGG 0.536404 6_4:+73731678 None:intergenic
GAGGAAACTGCAGTAGGTGT+TGG 0.536508 6_4:-73733307 Msa0996090:CDS
TAATGTGATGGAAAATTGCT+TGG 0.537711 6_4:-73731007 Msa0996090:CDS
CAGTAGGTGTTGGAACTGTA+GGG 0.543728 6_4:-73733297 Msa0996090:CDS
GGAAGATTTCAGCTGCAGCT+TGG 0.547015 6_4:-73730764 Msa0996090:CDS
TCAGAGGCAATAATGTTAGC+TGG 0.549556 6_4:-73733271 Msa0996090:CDS
AATGTTAGCGGTCACAAGTA+CGG 0.552630 6_4:-73731621 Msa0996090:CDS
TTCAAAAGATGCTCATGTTG+CGG 0.558105 6_4:-73730674 Msa0996090:CDS
CTTCACATCCTCAAACTCTC+CGG 0.561969 6_4:+73731791 None:intergenic
GTTCATAGATGCATGGACAT+TGG 0.563250 6_4:+73730413 None:intergenic
AAAAGAACAAGGAGACAGGA+TGG 0.565661 6_4:-73731746 Msa0996090:CDS
AACAGAGGATTACTATGTGA+TGG 0.565809 6_4:-73731886 Msa0996090:CDS
GTGAAAAGTATCAATGTTAG+CGG 0.565895 6_4:-73731633 Msa0996090:CDS
TTCACATTGAATTTCTCCAA+AGG 0.571801 6_4:-73731495 Msa0996090:intron
CATGTAGATGCTGCGAGTGG+AGG 0.573182 6_4:-73731711 Msa0996090:CDS
CAAAATGGCTGCAACACAGA+TGG 0.582491 6_4:+73731827 None:intergenic
TGATCACTTATTCTAAGTAG+TGG 0.588952 6_4:-73735119 Msa0996090:five_prime_UTR
GGCGAACACAAGAATTCTGA+AGG 0.590261 6_4:-73730986 Msa0996090:CDS
AAAGAACAAGGAGACAGGAT+GGG 0.595274 6_4:-73731745 Msa0996090:CDS
AACACAAGAATTCTGAAGGA+AGG 0.596220 6_4:-73730982 Msa0996090:CDS
AAATATGGTTCATAGATGCA+TGG 0.597106 6_4:+73730406 None:intergenic
TATTGGAAGAAGCTTGTGGA+TGG 0.599442 6_4:-73730583 Msa0996090:CDS
AAGCAACTCACAACAATCAA+GGG 0.600601 6_4:+73730510 None:intergenic
TAGGTATTGGAAGAAGCTTG+TGG 0.602041 6_4:-73730587 Msa0996090:CDS
AGTTACTGGAGCTAATGTGC+AGG 0.605359 6_4:-73733179 Msa0996090:intron
ATGATAAGCTTATCACACTC+AGG 0.609818 6_4:+73734664 None:intergenic
TTCATCATAAATGTATACAA+AGG 0.611494 6_4:+73730355 None:intergenic
AGAAGCGAAAGTGCATGCTA+TGG 0.612340 6_4:+73734924 None:intergenic
AAGGAATTGAGAAAACAGGA+AGG 0.618569 6_4:-73730963 Msa0996090:CDS
TAAGGGCTACAATAATGTGA+TGG 0.621718 6_4:-73731019 Msa0996090:intron
GGAAATCCCATAGAAGATCA+GGG 0.625993 6_4:+73731667 None:intergenic
TCTTTGATAACATTAAGTAG+TGG 0.626567 6_4:-73735079 Msa0996090:five_prime_UTR
CAGACCATTTGAGAAAATAC+GGG 0.628218 6_4:-73730855 Msa0996090:CDS
AAGTACGGTCTTGTTTACCC+TGG 0.636562 6_4:-73731606 Msa0996090:CDS
ACCATTTGAGAAAATACGGG+TGG 0.649671 6_4:-73730852 Msa0996090:CDS
TTCAGAGAGAAGGCTACAAG+TGG 0.654016 6_4:+73730910 None:intergenic
AATCTTCCCTAATCACCACT+CGG 0.661532 6_4:+73730779 None:intergenic
ATTCATGTAGATGCTGCGAG+TGG 0.665981 6_4:-73731714 Msa0996090:CDS
TGGAACTGTAGGGTCATCAG+AGG 0.671933 6_4:-73733287 Msa0996090:CDS
CAGACTAAGAGAAAATCAGA+AGG 0.687264 6_4:-73733226 Msa0996090:CDS
TGATGTTAGATGGAAAACCA+AGG 0.691803 6_4:-73734723 Msa0996090:CDS
TCCGGCCTACACAATGCCAG+CGG 0.698888 6_4:-73730824 Msa0996090:CDS
AAACAACCCAACCAATACCA+GGG 0.700278 6_4:+73731589 None:intergenic
TAAACAAACCTGAAGCTCAG+TGG 0.702836 6_4:+73734594 None:intergenic
ACACATCGCTGTCCTCCGAG+TGG 0.704085 6_4:-73730794 Msa0996090:CDS
AAAGGAAGTGAAACTAACAG+AGG 0.707787 6_4:-73731901 Msa0996090:CDS
CTTCCCTAATCACCACTCGG+AGG 0.723923 6_4:+73730782 None:intergenic
TATCGCGAGTGAGACAAGCG+AGG 0.724808 6_4:-73730650 Msa0996090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGATTAAAAAAGAAAAA+TGG + chr6_4:73734382-73734401 None:intergenic 10.0%
!!! ATTTTTCTTTTTTAATCATA+TGG - chr6_4:73734381-73734400 Msa0996090:intron 10.0%
!! TAAAATTATTTCACAGTAAA+AGG - chr6_4:73731636-73731655 Msa0996090:CDS 15.0%
!! AAAATTATTTCACAGTAAAA+GGG - chr6_4:73731637-73731656 Msa0996090:CDS 15.0%
!!! GGAAAATATCATTTTTTTAA+TGG - chr6_4:73731785-73731804 Msa0996090:CDS 15.0%
!! TTCATTCATTCATATAAATA+TGG + chr6_4:73735100-73735119 None:intergenic 15.0%
!! TCAAAGAAAAAAGAAAAAAG+AGG + chr6_4:73730396-73730415 None:intergenic 20.0%
!!! TGTTTTTTTTAAGGAAGAAA+GGG + chr6_4:73730625-73730644 None:intergenic 20.0%
!!! ATGTTTTTTTTAAGGAAGAA+AGG + chr6_4:73730626-73730645 None:intergenic 20.0%
!! TAACAAGAATTATGTTGATA+TGG - chr6_4:73730856-73730875 Msa0996090:CDS 20.0%
!!! TTGATCAAGATTTTAAATTG+TGG - chr6_4:73730932-73730951 Msa0996090:CDS 20.0%
!!! GGATCAAATTTTAAACTAAA+AGG - chr6_4:73731306-73731325 Msa0996090:intron 20.0%
!!! TTTTAAGGATTAAAGGAAAA+AGG + chr6_4:73731728-73731747 None:intergenic 20.0%
!!! ATGATAGTTTTAAGGATTAA+AGG + chr6_4:73731735-73731754 None:intergenic 20.0%
!!! TTGTAAGTATCAAATTTTGA+GGG + chr6_4:73731818-73731837 None:intergenic 20.0%
!!! CAACATAAACTTAATTTTTC+TGG + chr6_4:73732612-73732631 None:intergenic 20.0%
!!! ATATTTGTTGAACAAAAGTA+AGG + chr6_4:73733091-73733110 None:intergenic 20.0%
!!! AATTTTGATTCTACAATACT+GGG + chr6_4:73733195-73733214 None:intergenic 20.0%
!! TCAAGTAAATATATTACCTT+TGG + chr6_4:73734012-73734031 None:intergenic 20.0%
!!! TGTTATTTTTCTTGCTTTAA+GGG - chr6_4:73734452-73734471 Msa0996090:intron 20.0%
!! TTCATCATAAATGTATACAA+AGG + chr6_4:73735136-73735155 None:intergenic 20.0%
!! TCTTTGATAACATTAAGTAG+TGG - chr6_4:73730409-73730428 Msa0996090:three_prime_UTR 25.0%
!!! TAGGTGTGATGTTTTTTTTA+AGG + chr6_4:73730634-73730653 None:intergenic 25.0%
!!! ACCTAGTTTTTTTTGTAATG+AGG - chr6_4:73730649-73730668 Msa0996090:CDS 25.0%
! ACCTCATTACAAAAAAAACT+AGG + chr6_4:73730653-73730672 None:intergenic 25.0%
! CTATATCAACACATAAACAT+AGG + chr6_4:73730683-73730702 None:intergenic 25.0%
!! CTATGTTTATGTGTTGATAT+AGG - chr6_4:73730681-73730700 Msa0996090:CDS 25.0%
! AATAAGACTAAGTACATGTT+TGG - chr6_4:73731001-73731020 Msa0996090:CDS 25.0%
!! TAAATTGATGGATGAGTTTA+AGG + chr6_4:73731333-73731352 None:intergenic 25.0%
! AGTTTCTCTCTTTAAATCTA+AGG - chr6_4:73731403-73731422 Msa0996090:intron 25.0%
!! CACCATTATAGTTTGAAATT+GGG + chr6_4:73731467-73731486 None:intergenic 25.0%
!! ACACCATTATAGTTTGAAAT+TGG + chr6_4:73731468-73731487 None:intergenic 25.0%
!!! AAGTCTTGATTTTGAGTAAT+TGG - chr6_4:73731521-73731540 Msa0996090:CDS 25.0%
!!! AGTCTTGATTTTGAGTAATT+GGG - chr6_4:73731522-73731541 Msa0996090:CDS 25.0%
!!! TTTGATCTTTGAAACTTGTT+TGG - chr6_4:73731567-73731586 Msa0996090:CDS 25.0%
!!! AGCAGAAAATGATAGTTTTA+AGG + chr6_4:73731743-73731762 None:intergenic 25.0%
!!! AAGTTGCTTTTTTGAAGAAA+GGG - chr6_4:73731764-73731783 Msa0996090:CDS 25.0%
!! GTTGTAAGTATCAAATTTTG+AGG + chr6_4:73731819-73731838 None:intergenic 25.0%
!!! CTTTTTCGATATTTTCTGTT+TGG - chr6_4:73731841-73731860 Msa0996090:CDS 25.0%
! CTGTTACAATTGAAATATCT+TGG - chr6_4:73731914-73731933 Msa0996090:CDS 25.0%
!!! TTTAGTTTTTGTCAAAATCG+CGG - chr6_4:73732494-73732513 Msa0996090:intron 25.0%
!!! GAATTTTGATTCTACAATAC+TGG + chr6_4:73733196-73733215 None:intergenic 25.0%
!! CGATTAATGTGTCATATTTT+GGG - chr6_4:73733229-73733248 Msa0996090:CDS 25.0%
!! GATTAATGTGTCATATTTTG+GGG - chr6_4:73733230-73733249 Msa0996090:CDS 25.0%
!!! ATTAATGTGTCATATTTTGG+GGG - chr6_4:73733231-73733250 Msa0996090:CDS 25.0%
! ACAATATTCATAAGCTATCA+TGG + chr6_4:73733354-73733373 None:intergenic 25.0%
! ACTTCTTACTAAAAAGAACA+AGG - chr6_4:73733731-73733750 Msa0996090:intron 25.0%
!! GTTTTTCACATCAATTATCT+TGG - chr6_4:73733954-73733973 Msa0996090:intron 25.0%
! CCAATGTATGAAAAATTCAA+AGG + chr6_4:73734041-73734060 None:intergenic 25.0%
!! CCTTTGAATTTTTCATACAT+TGG - chr6_4:73734038-73734057 Msa0996090:intron 25.0%
!! TCATGAGTATATTTCTTTTC+AGG + chr6_4:73734128-73734147 None:intergenic 25.0%
! GAAATACAAAGCAACATTAA+TGG + chr6_4:73734175-73734194 None:intergenic 25.0%
! CTCAATACTACCAATTTATA+CGG - chr6_4:73734222-73734241 Msa0996090:intron 25.0%
!!! CTGTTATTTTTCTTGCTTTA+AGG - chr6_4:73734451-73734470 Msa0996090:intron 25.0%
!! TCTTTTGAATTGATAGAACT+TGG + chr6_4:73734803-73734822 None:intergenic 25.0%
TGATCACTTATTCTAAGTAG+TGG - chr6_4:73730369-73730388 Msa0996090:three_prime_UTR 30.0%
! AGTTGAAGAAATCACCATTT+TGG + chr6_4:73730516-73730535 None:intergenic 30.0%
! TCTTTTGGTATAGAATTCTC+TGG + chr6_4:73730716-73730735 None:intergenic 30.0%
!! AATGATGAGTTGATGTTAGA+TGG - chr6_4:73730755-73730774 Msa0996090:CDS 30.0%
! TTCATTTGTTACTACTTGGA+TGG - chr6_4:73730799-73730818 Msa0996090:CDS 30.0%
AGATAGGATCTTTGATATTG+CGG - chr6_4:73730965-73730984 Msa0996090:CDS 30.0%
! ATTTTGCAAAAGCTACATCA+GGG + chr6_4:73731062-73731081 None:intergenic 30.0%
! ATGTAGCTTTTGCAAAATCA+GGG - chr6_4:73731064-73731083 Msa0996090:intron 30.0%
ACACCATATTGAAACTATAG+TGG - chr6_4:73731285-73731304 Msa0996090:CDS 30.0%
GATCCACTATAGTTTCAATA+TGG + chr6_4:73731291-73731310 None:intergenic 30.0%
ATACTCAAGGACTAAATTGA+TGG + chr6_4:73731345-73731364 None:intergenic 30.0%
ATCAATTTAGTCCTTGAGTA+TGG - chr6_4:73731344-73731363 Msa0996090:intron 30.0%
TATACTCTCATCCATCAATT+TGG + chr6_4:73731371-73731390 None:intergenic 30.0%
GACCCAATTTCAAACTATAA+TGG - chr6_4:73731462-73731481 Msa0996090:intron 30.0%
!!! CAAGTTGCTTTTTTGAAGAA+AGG - chr6_4:73731763-73731782 Msa0996090:CDS 30.0%
! TTTCGATATTTTCTGTTTGG+TGG - chr6_4:73731844-73731863 Msa0996090:CDS 30.0%
!! TCAGTACTTTCAAGTTTCAA+GGG + chr6_4:73731975-73731994 None:intergenic 30.0%
!! ATCAGTACTTTCAAGTTTCA+AGG + chr6_4:73731976-73731995 None:intergenic 30.0%
TTTGTTCAATTATGCAGAAC+AGG - chr6_4:73732013-73732032 Msa0996090:intron 30.0%
!! TGAAGAATTTTTGTGTCGTT+CGG - chr6_4:73732656-73732675 Msa0996090:intron 30.0%
TAAGAAACTACATATGACTC+TGG + chr6_4:73732692-73732711 None:intergenic 30.0%
TTCAATGTAATCACATGTGT+TGG - chr6_4:73732965-73732984 Msa0996090:intron 30.0%
TTGTTGAACAAAAGTAAGGT+GGG + chr6_4:73733087-73733106 None:intergenic 30.0%
TTTGTTGAACAAAAGTAAGG+TGG + chr6_4:73733088-73733107 None:intergenic 30.0%
CAACAAATATTGCACATTTG+AGG - chr6_4:73733101-73733120 Msa0996090:intron 30.0%
! GCGATTAATGTGTCATATTT+TGG - chr6_4:73733228-73733247 Msa0996090:CDS 30.0%
AAACGACATTAAACATAGAG+AGG + chr6_4:73733511-73733530 None:intergenic 30.0%
! TTTGTTGGGAAAAATTTGCT+AGG - chr6_4:73733547-73733566 Msa0996090:intron 30.0%
!! AAAATTTGCTAGGTACTTTG+AGG - chr6_4:73733557-73733576 Msa0996090:intron 30.0%
! ACATTGATACTTTTCACCAA+CGG + chr6_4:73733852-73733871 None:intergenic 30.0%
!! GTGAAAAGTATCAATGTTAG+CGG - chr6_4:73733855-73733874 Msa0996090:intron 30.0%
ATGTGAAAAACAAGATCATC+CGG + chr6_4:73733945-73733964 None:intergenic 30.0%
GAGAAATTCAATGTGAAAGT+TGG + chr6_4:73733990-73734009 None:intergenic 30.0%
TTCACATTGAATTTCTCCAA+AGG - chr6_4:73733993-73734012 Msa0996090:intron 30.0%
! TAATGTGATGGAAAATTGCT+TGG - chr6_4:73734481-73734500 Msa0996090:intron 30.0%
! AAGGTTTAAAATTGTCTCCA+AGG - chr6_4:73734544-73734563 Msa0996090:intron 30.0%
AGAAAAAGTTGTGAATCTCT+TGG - chr6_4:73734769-73734788 Msa0996090:CDS 30.0%
CTCTATAGATAAAGCAACAA+TGG + chr6_4:73735047-73735066 None:intergenic 30.0%
AAATATGGTTCATAGATGCA+TGG + chr6_4:73735085-73735104 None:intergenic 30.0%
ACTGATCTTTGTGAAGATAG+AGG + chr6_4:73730436-73730455 None:intergenic 35.0%
!! GAAGAAATCACCATTTTGGT+TGG + chr6_4:73730512-73730531 None:intergenic 35.0%
AAGAAAGGGAACACTTACTT+AGG + chr6_4:73730611-73730630 None:intergenic 35.0%
! ATCTGATATGCTGCATCTTT+TGG + chr6_4:73730731-73730750 None:intergenic 35.0%
TGATGTTAGATGGAAAACCA+AGG - chr6_4:73730765-73730784 Msa0996090:CDS 35.0%
! TGGCTTCATTTGTTACTACT+TGG - chr6_4:73730795-73730814 Msa0996090:CDS 35.0%
ATGATAAGCTTATCACACTC+AGG + chr6_4:73730827-73730846 None:intergenic 35.0%
TGAGTGTGATAAGCTTATCA+TGG - chr6_4:73730826-73730845 Msa0996090:CDS 35.0%
! GATTTTGCAAAAGCTACATC+AGG + chr6_4:73731063-73731082 None:intergenic 35.0%
! GATGTAGCTTTTGCAAAATC+AGG - chr6_4:73731063-73731082 Msa0996090:intron 35.0%
TCTCTCTCTAAATCTGATGA+TGG - chr6_4:73731250-73731269 Msa0996090:intron 35.0%
!! CTAAATCTGATGATGGTCTA+CGG - chr6_4:73731257-73731276 Msa0996090:CDS 35.0%
ATCAATTTGGTCCATACTCA+AGG + chr6_4:73731358-73731377 None:intergenic 35.0%
TTGAGTATGGACCAAATTGA+TGG - chr6_4:73731357-73731376 Msa0996090:intron 35.0%
! AGTTTGAAATTGGGTCTCTA+CGG + chr6_4:73731458-73731477 None:intergenic 35.0%
AAAGTCTGCAACCACAATTT+GGG + chr6_4:73731493-73731512 None:intergenic 35.0%
AAAAGTCTGCAACCACAATT+TGG + chr6_4:73731494-73731513 None:intergenic 35.0%
!! GATATTTTCTGTTTGGTGGT+TGG - chr6_4:73731848-73731867 Msa0996090:CDS 35.0%
!!! TAGCTGGTCTAGCTTTTAAA+AGG - chr6_4:73732233-73732252 Msa0996090:intron 35.0%
!!! GTCTAGCTTTTAAAAGGAAG+TGG - chr6_4:73732239-73732258 Msa0996090:intron 35.0%
CAGACTAAGAGAAAATCAGA+AGG - chr6_4:73732262-73732281 Msa0996090:intron 35.0%
ACTATGTTCGGCTTATCATA+TGG + chr6_4:73732292-73732311 None:intergenic 35.0%
TTAGCTCCAGTAACTATGTT+CGG + chr6_4:73732304-73732323 None:intergenic 35.0%
ATGCTCATTTCGTGAGAAAT+AGG - chr6_4:73732396-73732415 Msa0996090:intron 35.0%
! AATAGGTAGAAGTGTGTGTT+TGG - chr6_4:73732413-73732432 Msa0996090:intron 35.0%
ACAAAATCACGATACTGTCA+TGG + chr6_4:73732461-73732480 None:intergenic 35.0%
! TGTACATCTGAAATGGTTTG+GGG + chr6_4:73732586-73732605 None:intergenic 35.0%
! GTGTACATCTGAAATGGTTT+GGG + chr6_4:73732587-73732606 None:intergenic 35.0%
! TGTGTACATCTGAAATGGTT+TGG + chr6_4:73732588-73732607 None:intergenic 35.0%
GTTGTCTAGATGTGTACTTT+AGG - chr6_4:73732628-73732647 Msa0996090:intron 35.0%
ACAATGTGCAAAACCACATA+GGG + chr6_4:73732726-73732745 None:intergenic 35.0%
AACAATGTGCAAAACCACAT+AGG + chr6_4:73732727-73732746 None:intergenic 35.0%
GTTATGAAATGCAATAGCAC+AGG - chr6_4:73732744-73732763 Msa0996090:intron 35.0%
GTTATGAAATGCAATAGCAC+AGG - chr6_4:73732744-73732763 Msa0996090:intron 35.0%
TGTTGAACAAAAGTAAGGTG+GGG + chr6_4:73733086-73733105 None:intergenic 35.0%
! GAGAGGTATAATGATCTGTT+TGG + chr6_4:73733494-73733513 None:intergenic 35.0%
GTCGTTTAAATATACTACGC+AGG - chr6_4:73733524-73733543 Msa0996090:intron 35.0%
AATATACTACGCAGGTTTGT+TGG - chr6_4:73733532-73733551 Msa0996090:intron 35.0%
! ATATACTACGCAGGTTTGTT+GGG - chr6_4:73733533-73733552 Msa0996090:intron 35.0%
AAAGGAAGTGAAACTAACAG+AGG - chr6_4:73733587-73733606 Msa0996090:intron 35.0%
AACAGAGGATTACTATGTGA+TGG - chr6_4:73733602-73733621 Msa0996090:intron 35.0%
TCCATTGAAAGCTGTTGAAA+TGG - chr6_4:73733626-73733645 Msa0996090:intron 35.0%
ACCATTTCAACAGCTTTCAA+TGG + chr6_4:73733630-73733649 None:intergenic 35.0%
ACTAAAAAGAACAAGGAGAC+AGG - chr6_4:73733738-73733757 Msa0996090:intron 35.0%
TTTCATACATTGGTCACATG+TGG - chr6_4:73734048-73734067 Msa0996090:intron 35.0%
TGCTTTGTATTTCTTTCGAC+AGG - chr6_4:73734182-73734201 Msa0996090:intron 35.0%
GCTTTGTATTTCTTTCGACA+GGG - chr6_4:73734183-73734202 Msa0996090:intron 35.0%
TACTACCAATTTATACGGCT+TGG - chr6_4:73734227-73734246 Msa0996090:intron 35.0%
TAAGGGCTACAATAATGTGA+TGG - chr6_4:73734469-73734488 Msa0996090:intron 35.0%
! AACACAAGAATTCTGAAGGA+AGG - chr6_4:73734506-73734525 Msa0996090:intron 35.0%
AAGGAAGGAATTGAGAAAAC+AGG - chr6_4:73734521-73734540 Msa0996090:intron 35.0%
AAGGAATTGAGAAAACAGGA+AGG - chr6_4:73734525-73734544 Msa0996090:intron 35.0%
AAAATTGTCTCCAAGGACAT+AGG - chr6_4:73734551-73734570 Msa0996090:intron 35.0%
GCAGACCATTTGAGAAAATA+CGG - chr6_4:73734632-73734651 Msa0996090:CDS 35.0%
CAGACCATTTGAGAAAATAC+GGG - chr6_4:73734633-73734652 Msa0996090:CDS 35.0%
TTCAAAAGATGCTCATGTTG+CGG - chr6_4:73734814-73734833 Msa0996090:intron 35.0%
AAGCAACTCACAACAATCAA+GGG + chr6_4:73734981-73735000 None:intergenic 35.0%
AAAGCAACTCACAACAATCA+AGG + chr6_4:73734982-73735001 None:intergenic 35.0%
CAGAACTCATCCAACCAAAA+TGG - chr6_4:73730499-73730518 Msa0996090:three_prime_UTR 40.0%
!! ATGGTCTCGTTTTGTTCATC+TGG + chr6_4:73730548-73730567 None:intergenic 40.0%
TGGAAAACCAAGGCTTAACT+TGG - chr6_4:73730775-73730794 Msa0996090:CDS 40.0%
AATGAAGCCAAGTTAAGCCT+TGG + chr6_4:73730785-73730804 None:intergenic 40.0%
TAAACAAACCTGAAGCTCAG+TGG + chr6_4:73730897-73730916 None:intergenic 40.0%
TGGTATCACAGTGAGTTTGA+TGG - chr6_4:73731021-73731040 Msa0996090:intron 40.0%
ACCTGATTCTGACAAACCTA+CGG - chr6_4:73731093-73731112 Msa0996090:intron 40.0%
!! TAATGGTGTTGCCCAAATTG+TGG - chr6_4:73731479-73731498 Msa0996090:intron 40.0%
TCAGAGGCAATAATGTTAGC+TGG - chr6_4:73732217-73732236 Msa0996090:intron 40.0%
GATAAGCCGAACATAGTTAC+TGG - chr6_4:73732295-73732314 Msa0996090:intron 40.0%
GAAGTGTGTGTTTGGATAAG+TGG - chr6_4:73732421-73732440 Msa0996090:intron 40.0%
TGTGTGTTTGGATAAGTGGT+GGG - chr6_4:73732425-73732444 Msa0996090:intron 40.0%
! AGTTTTTGTCAAAATCGCGG+CGG - chr6_4:73732497-73732516 Msa0996090:intron 40.0%
AATTCCTCCCAAAGCATGTT+TGG + chr6_4:73732555-73732574 None:intergenic 40.0%
! GTACATCTGAAATGGTTTGG+GGG + chr6_4:73732585-73732604 None:intergenic 40.0%
CTGGATGTGTACATCTGAAA+TGG + chr6_4:73732593-73732612 None:intergenic 40.0%
TAGAAAAGTTGCTCCCTATG+TGG - chr6_4:73732710-73732729 Msa0996090:intron 40.0%
AAGAACTCTCTTTAGGCCTT+CGG - chr6_4:73732791-73732810 Msa0996090:intron 40.0%
TGCATTTCATAACAAGCCGA+AGG + chr6_4:73732810-73732829 None:intergenic 40.0%
AAGAACTCTCTTTAGGCCTT+CGG - chr6_4:73732791-73732810 Msa0996090:intron 40.0%
! ACGCCTTTGATCAAAAGTGT+CGG - chr6_4:73733008-73733027 Msa0996090:intron 40.0%
!! GTGAACAAAGCTTTGAGACA+GGG + chr6_4:73733127-73733146 None:intergenic 40.0%
!! AGTGAACAAAGCTTTGAGAC+AGG + chr6_4:73733128-73733147 None:intergenic 40.0%
!! TCAAAGCTTTGTTCACTCTC+AGG - chr6_4:73733131-73733150 Msa0996090:intron 40.0%
!! CAAAGCTTTGTTCACTCTCA+GGG - chr6_4:73733132-73733151 Msa0996090:intron 40.0%
!! AAAGCTTTGTTCACTCTCAG+GGG - chr6_4:73733133-73733152 Msa0996090:intron 40.0%
!! GCTTTAGGATTCACATATCC+TGG - chr6_4:73733163-73733182 Msa0996090:intron 40.0%
TTGATTCTACAATACTGGGC+TGG + chr6_4:73733191-73733210 None:intergenic 40.0%
!! ATTTTGGGGGCTTTTTCCTT+AGG - chr6_4:73733244-73733263 Msa0996090:CDS 40.0%
! CTTTTTCCTTAGGCTTCGTT+TGG - chr6_4:73733254-73733273 Msa0996090:CDS 40.0%
TAGACACGTGTGAAACTGTT+TGG - chr6_4:73733306-73733325 Msa0996090:CDS 40.0%
AGACACGTGTGAAACTGTTT+GGG - chr6_4:73733307-73733326 Msa0996090:CDS 40.0%
!! GTACTTTGAGGTTGAGCTAA+AGG - chr6_4:73733569-73733588 Msa0996090:intron 40.0%
!! ATCTGTGTTGCAGCCATTTT+GGG - chr6_4:73733663-73733682 Msa0996090:intron 40.0%
!!! ATTTTGGGTTCAACGTTGAC+CGG - chr6_4:73733678-73733697 Msa0996090:intron 40.0%
AAAAGAACAAGGAGACAGGA+TGG - chr6_4:73733742-73733761 Msa0996090:intron 40.0%
AAAGAACAAGGAGACAGGAT+GGG - chr6_4:73733743-73733762 Msa0996090:intron 40.0%
AGAAGATCAGGGTAGAGAAA+CGG + chr6_4:73733813-73733832 None:intergenic 40.0%
TTCTCTACCCTGATCTTCTA+TGG - chr6_4:73733814-73733833 Msa0996090:intron 40.0%
TCTCTACCCTGATCTTCTAT+GGG - chr6_4:73733815-73733834 Msa0996090:intron 40.0%
GGAAATCCCATAGAAGATCA+GGG + chr6_4:73733824-73733843 None:intergenic 40.0%
! TACTTTTCACCAACGGCAAA+CGG + chr6_4:73733845-73733864 None:intergenic 40.0%
AATGTTAGCGGTCACAAGTA+CGG - chr6_4:73733867-73733886 Msa0996090:intron 40.0%
!! TTGTTTACCCTGGTATTGGT+TGG - chr6_4:73733892-73733911 Msa0996090:intron 40.0%
!! TGTTTACCCTGGTATTGGTT+GGG - chr6_4:73733893-73733912 Msa0996090:intron 40.0%
AAACAACCCAACCAATACCA+GGG + chr6_4:73733902-73733921 None:intergenic 40.0%
TTCAGGAGATTCTCACATGT+TGG + chr6_4:73734111-73734130 None:intergenic 40.0%
TATCTTCTCTTCGCATGATG+TGG + chr6_4:73734338-73734357 None:intergenic 40.0%
ACCATTTGAGAAAATACGGG+TGG - chr6_4:73734636-73734655 Msa0996090:CDS 40.0%
! TCCACCCGTATTTTCTCAAA+TGG + chr6_4:73734640-73734659 None:intergenic 40.0%
AAAATACGGGTGGATAGTTC+CGG - chr6_4:73734646-73734665 Msa0996090:CDS 40.0%
AATCTTCCCTAATCACCACT+CGG + chr6_4:73734712-73734731 None:intergenic 40.0%
ACGCTGAGATTCTTAGGTAT+TGG - chr6_4:73734888-73734907 Msa0996090:intron 40.0%
!! TAGGTATTGGAAGAAGCTTG+TGG - chr6_4:73734901-73734920 Msa0996090:CDS 40.0%
TATTGGAAGAAGCTTGTGGA+TGG - chr6_4:73734905-73734924 Msa0996090:CDS 40.0%
GTTCATAGATGCATGGACAT+TGG + chr6_4:73735078-73735097 None:intergenic 40.0%
! AGAAGCGAAAGTGCATGCTA+TGG + chr6_4:73730567-73730586 None:intergenic 45.0%
TTCTAGATACGTGCGTGAAC+AGG - chr6_4:73730583-73730602 Msa0996090:CDS 45.0%
GTAGGTTTGTCAGAATCAGG+TGG + chr6_4:73731094-73731113 None:intergenic 45.0%
ACCGTAGGTTTGTCAGAATC+AGG + chr6_4:73731097-73731116 None:intergenic 45.0%
!! TGCATGCTTGTTATCACCGT+AGG + chr6_4:73731112-73731131 None:intergenic 45.0%
!! CAGTAGGTGTTGGAACTGTA+GGG - chr6_4:73732191-73732210 Msa0996090:intron 45.0%
AGTTACTGGAGCTAATGTGC+AGG - chr6_4:73732309-73732328 Msa0996090:intron 45.0%
GTGTGTGTTTGGATAAGTGG+TGG - chr6_4:73732424-73732443 Msa0996090:intron 45.0%
AGCCAAGCCAAACATGCTTT+GGG - chr6_4:73732545-73732564 Msa0996090:intron 45.0%
!! TTCTTGTCTGGCCTTACCTT+CGG + chr6_4:73732776-73732795 None:intergenic 45.0%
GCCAGACAAGAACTCTCTTT+AGG - chr6_4:73732784-73732803 Msa0996090:intron 45.0%
GCCTAAAGAGAGTTCTTGTC+TGG + chr6_4:73732788-73732807 None:intergenic 45.0%
!! TTCTTGTCTGGCCTTACCTT+CGG + chr6_4:73732776-73732795 None:intergenic 45.0%
GCCAGACAAGAACTCTCTTT+AGG - chr6_4:73732784-73732803 Msa0996090:intron 45.0%
GCCTAAAGAGAGTTCTTGTC+TGG + chr6_4:73732788-73732807 None:intergenic 45.0%
!! CTTTTGATCAAAGGCGTGTC+CGG + chr6_4:73733005-73733024 None:intergenic 45.0%
!! GCACCGACACTTTTGATCAA+AGG + chr6_4:73733014-73733033 None:intergenic 45.0%
!! CTATGTGTGTAGTGGATGAG+TGG + chr6_4:73733047-73733066 None:intergenic 45.0%
ACTAGTCCAAACGAAGCCTA+AGG + chr6_4:73733263-73733282 None:intergenic 45.0%
CAAAATGGCTGCAACACAGA+TGG + chr6_4:73733664-73733683 None:intergenic 45.0%
! CATCTGTGTTGCAGCCATTT+TGG - chr6_4:73733662-73733681 Msa0996090:intron 45.0%
GGTCAACGTTGAACCCAAAA+TGG + chr6_4:73733679-73733698 None:intergenic 45.0%
CTTCACATCCTCAAACTCTC+CGG + chr6_4:73733700-73733719 None:intergenic 45.0%
CTCGCAGCATCTACATGAAT+TGG + chr6_4:73733774-73733793 None:intergenic 45.0%
ATTCATGTAGATGCTGCGAG+TGG - chr6_4:73733774-73733793 Msa0996090:intron 45.0%
CGGAAATCCCATAGAAGATC+AGG + chr6_4:73733825-73733844 None:intergenic 45.0%
!! AAGTACGGTCTTGTTTACCC+TGG - chr6_4:73733882-73733901 Msa0996090:intron 45.0%
!! GGTCTTGTTTACCCTGGTAT+TGG - chr6_4:73733888-73733907 Msa0996090:intron 45.0%
CAAACAACCCAACCAATACC+AGG + chr6_4:73733903-73733922 None:intergenic 45.0%
!! CTGGTATTGGTTGGGTTGTT+TGG - chr6_4:73733901-73733920 Msa0996090:intron 45.0%
!! GTATTGGTTGGGTTGTTTGG+AGG - chr6_4:73733904-73733923 Msa0996090:intron 45.0%
CGAAGCCAAGCCGTATAAAT+TGG + chr6_4:73734235-73734254 None:intergenic 45.0%
! ATTTATACGGCTTGGCTTCG+AGG - chr6_4:73734235-73734254 Msa0996090:intron 45.0%
GGCGAACACAAGAATTCTGA+AGG - chr6_4:73734502-73734521 Msa0996090:intron 45.0%
TTCAGAGAGAAGGCTACAAG+TGG + chr6_4:73734581-73734600 None:intergenic 45.0%
AGACTCACGCTGAGATTCTT+AGG - chr6_4:73734882-73734901 Msa0996090:intron 45.0%
!!! TAAAATTATAAGTTATTTTA+TGG - chr6_4:73731185-73731204 Msa0996090:intron 5.0%
TTGTGGTTGCGATCGCAGAT+AGG - chr6_4:73730949-73730968 Msa0996090:CDS 50.0%
GGTGAAGAGGAAACTGCAGT+AGG - chr6_4:73732175-73732194 Msa0996090:intron 50.0%
GAGGAAACTGCAGTAGGTGT+TGG - chr6_4:73732181-73732200 Msa0996090:intron 50.0%
!! GCAGTAGGTGTTGGAACTGT+AGG - chr6_4:73732190-73732209 Msa0996090:intron 50.0%
TGGAACTGTAGGGTCATCAG+AGG - chr6_4:73732201-73732220 Msa0996090:intron 50.0%
CAGCCAAGCCAAACATGCTT+TGG - chr6_4:73732544-73732563 Msa0996090:intron 50.0%
CTCCCAAAGCATGTTTGGCT+TGG + chr6_4:73732550-73732569 None:intergenic 50.0%
! CAAGCCAAACATGCTTTGGG+AGG - chr6_4:73732548-73732567 Msa0996090:intron 50.0%
! CATCTGAAATGGTTTGGGGG+TGG + chr6_4:73732582-73732601 None:intergenic 50.0%
ATAGCACAGGTCTGAACCGA+AGG - chr6_4:73732757-73732776 Msa0996090:intron 50.0%
ACAGGTCTGAACCGAAGGTA+AGG - chr6_4:73732762-73732781 Msa0996090:intron 50.0%
ATAGCACAGGTCTGAACCGA+AGG - chr6_4:73732757-73732776 Msa0996090:intron 50.0%
ACAGGTCTGAACCGAAGGTA+AGG - chr6_4:73732762-73732781 Msa0996090:intron 50.0%
GTCCATGCATCATAAGCCGA+AGG + chr6_4:73732883-73732902 None:intergenic 50.0%
TGATGCATGGACACCTGACA+CGG - chr6_4:73732891-73732910 Msa0996090:intron 50.0%
ATGGACACCTGACACGGAAA+TGG - chr6_4:73732897-73732916 Msa0996090:intron 50.0%
TCAGTGTCCATTTCCGTGTC+AGG + chr6_4:73732907-73732926 None:intergenic 50.0%
GGAAATGGACACTGACACGT+TGG - chr6_4:73732912-73732931 Msa0996090:intron 50.0%
!! CACATGTGTTGGTGTCGTGT+CGG - chr6_4:73732976-73732995 Msa0996090:intron 50.0%
!! TCAGTGGGCTATGTGTGTAG+TGG + chr6_4:73733055-73733074 None:intergenic 50.0%
GGTGGGGCAATACATTCAGT+GGG + chr6_4:73733070-73733089 None:intergenic 50.0%
AGGTGGGGCAATACATTCAG+TGG + chr6_4:73733071-73733090 None:intergenic 50.0%
AACGTTGACCGGAGAGTTTG+AGG - chr6_4:73733689-73733708 Msa0996090:intron 50.0%
ATGGGATTTCCGTTTGCCGT+TGG - chr6_4:73733833-73733852 Msa0996090:intron 50.0%
!! GAGGCATAAAGCTGACTTGC+CGG - chr6_4:73733923-73733942 Msa0996090:intron 50.0%
AAGTGGCACACCTATGTCCT+TGG + chr6_4:73734564-73734583 None:intergenic 50.0%
GCTGCTGTCTTTCAGAGAGA+AGG + chr6_4:73734591-73734610 None:intergenic 50.0%
TGTCCTCCGAGTGGTGATTA+GGG - chr6_4:73734703-73734722 Msa0996090:CDS 50.0%
GGAAGATTTCAGCTGCAGCT+TGG - chr6_4:73734724-73734743 Msa0996090:CDS 50.0%
CTTGTGGATGGCAAGAGAGT+TGG - chr6_4:73734917-73734936 Msa0996090:CDS 50.0%
CAAGAGAGTTGGAGCATGCT+AGG - chr6_4:73734928-73734947 Msa0996090:CDS 50.0%
TCCTGTCACCACTGAGCTTC+AGG - chr6_4:73730886-73730905 Msa0996090:CDS 55.0%
ACCTGAAGCTCAGTGGTGAC+AGG + chr6_4:73730890-73730909 None:intergenic 55.0%
GGCCTTCGGCTTATGATGCA+TGG - chr6_4:73732878-73732897 Msa0996090:intron 55.0%
!! CTCAGGGGTCAGCTAGCTTT+AGG - chr6_4:73733148-73733167 Msa0996090:intron 55.0%
!! TACAATACTGGGCTGGCTCC+AGG + chr6_4:73733184-73733203 None:intergenic 55.0%
CATGTAGATGCTGCGAGTGG+AGG - chr6_4:73733777-73733796 Msa0996090:intron 55.0%
CTGTCCTCCGAGTGGTGATT+AGG - chr6_4:73734702-73734721 Msa0996090:CDS 55.0%
CTTCCCTAATCACCACTCGG+AGG + chr6_4:73734709-73734728 None:intergenic 55.0%
TATCGCGAGTGAGACAAGCG+AGG - chr6_4:73734838-73734857 Msa0996090:intron 55.0%
!! GTTGGTGTCGTGTCGGTCAC+CGG - chr6_4:73732983-73733002 Msa0996090:intron 60.0%
TCCGGCCTACACAATGCCAG+CGG - chr6_4:73734664-73734683 Msa0996090:CDS 60.0%
TCCGCTGGCATTGTGTAGGC+CGG + chr6_4:73734668-73734687 None:intergenic 60.0%
TGCGTCCGCTGGCATTGTGT+AGG + chr6_4:73734672-73734691 None:intergenic 60.0%
! GCGATGTGTTTTGCGTCCGC+TGG + chr6_4:73734683-73734702 None:intergenic 60.0%
ACACATCGCTGTCCTCCGAG+TGG - chr6_4:73734694-73734713 Msa0996090:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 73730333 73735177 73730333 ID=Msa0996090;Name=Msa0996090
chr6_4 mRNA 73730333 73735177 73730333 ID=Msa0996090-mRNA-1;Parent=Msa0996090;Name=Msa0996090-mRNA-1;_AED=0.29;_eAED=0.29;_QI=185|1|1|1|0.66|0.71|7|228|499
chr6_4 exon 73730333 73731037 73730333 ID=Msa0996090-mRNA-1:exon:13748;Parent=Msa0996090-mRNA-1
chr6_4 exon 73731254 73731306 73731254 ID=Msa0996090-mRNA-1:exon:13747;Parent=Msa0996090-mRNA-1
chr6_4 exon 73731496 73731964 73731496 ID=Msa0996090-mRNA-1:exon:13746;Parent=Msa0996090-mRNA-1
chr6_4 exon 73733180 73733336 73733180 ID=Msa0996090-mRNA-1:exon:13745;Parent=Msa0996090-mRNA-1
chr6_4 exon 73733437 73733480 73733437 ID=Msa0996090-mRNA-1:exon:13744;Parent=Msa0996090-mRNA-1
chr6_4 exon 73734603 73734807 73734603 ID=Msa0996090-mRNA-1:exon:13743;Parent=Msa0996090-mRNA-1
chr6_4 exon 73734898 73735177 73734898 ID=Msa0996090-mRNA-1:exon:13742;Parent=Msa0996090-mRNA-1
chr6_4 five_prime_UTR 73734993 73735177 73734993 ID=Msa0996090-mRNA-1:five_prime_utr;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73734898 73734992 73734898 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73734603 73734807 73734603 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73733437 73733480 73733437 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73733180 73733336 73733180 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73731496 73731964 73731496 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73731254 73731306 73731254 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 CDS 73730561 73731037 73730561 ID=Msa0996090-mRNA-1:cds;Parent=Msa0996090-mRNA-1
chr6_4 three_prime_UTR 73730333 73730560 73730333 ID=Msa0996090-mRNA-1:three_prime_utr;Parent=Msa0996090-mRNA-1
Gene Sequence

>Msa0996090

ATGGTGATTTCTTCAACTGTCACACATCCAGATGAACAAAACGAGACCATAGCATGCACTTTCGCTTCTAGATACGTGCGTGAACAGGTTCCTAAGTTCAAGATGCCAGAGAATTCTATACCAAAAGATGCAGCATATCAGATAATAAATGATGAGTTGATGTTAGATGGAAAACCAAGGCTTAACTTGGCTTCATTTGTTACTACTTGGATGGAACCTGAGTGTGATAAGCTTATCATGGATTCACTTAACAAGAATTATGTTGATATGGATGAATATCCTGTCACCACTGAGCTTCAGAACAGGTGTGTGAATATAATAGCACATCTATTCAATGCTCCTATTGGTGAAGAGGAAACTGCAGTAGGTGTTGGAACTGTAGGGTCATCAGAGGCAATAATGTTAGCTGGTCTAGCTTTTAAAAGGAAGTGGCAGACTAAGAGAAAATCAGAAGGCAAACCATATGATAAGCCGAACATAGTTACTGGAGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCTAGGTACTTTGAGGTTGAGCTAAAGGAAGTGAAACTAACAGAGGATTACTATGTGATGGATCCATTGAAAGCTGTTGAAATGGTAGATGAGAACACCATCTGTGTTGCAGCCATTTTGGGTTCAACGTTGACCGGAGAGTTTGAGGATGTGAAGCTTCTCAACGAACTTCTTACTAAAAAGAACAAGGAGACAGGATGGGATACACCAATTCATGTAGATGCTGCGAGTGGAGGATTTGTTGCTCCGTTTCTCTACCCTGATCTTCTATGGGATTTCCGTTTGCCGTTGGTGAAAAGTATCAATGTTAGCGGTCACAAGTACGGTCTTGTTTACCCTGGTATTGGTTGGGTTGTTTGGAGGCATAAAGCTGACTTGCCGGATGATCTTGTTTTTCACATCAATTATCTTGGATCTGATCAACCAACTTTCACATTGAATTTCTCCAAAGGGTCGAGTCAAATCATTGCTCAATACTACCAATTTATACGGCTTGGCTTCGAGGGCTACAATAATGTGATGGAAAATTGCTTGGCGAACACAAGAATTCTGAAGGAAGGAATTGAGAAAACAGGAAGGTTTAAAATTGTCTCCAAGGACATAGGTGTGCCACTTGTAGCCTTCTCTCTGAAAGACAGCAGCAAACACACAGTGTTTGAGATAGCAGACCATTTGAGAAAATACGGGTGGATAGTTCCGGCCTACACAATGCCAGCGGACGCAAAACACATCGCTGTCCTCCGAGTGGTGATTAGGGAAGATTTCAGCTGCAGCTTGGCTGAAAGACTTGTTTCTGACATAGAAAAAGTTGTGAATCTCTTGGACACACTTCCAAGTTCTATCAATTCAAAAGATGCTCATGTTGCGGTTATCGCGAGTGAGACAAGCGAGGAAGTTAAGAAAGATATTACAGAGACTCACGCTGAGATTCTTAGGTATTGGAAGAAGCTTGTGGATGGCAAGAGAGTTGGAGCATGCTAG

Protein sequence

>Msa0996090

MVISSTVTHPDEQNETIACTFASRYVREQVPKFKMPENSIPKDAAYQIINDELMLDGKPRLNLASFVTTWMEPECDKLIMDSLNKNYVDMDEYPVTTELQNRCVNIIAHLFNAPIGEEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEDYYVMDPLKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGWDTPIHVDAASGGFVAPFLYPDLLWDFRLPLVKSINVSGHKYGLVYPGIGWVVWRHKADLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYNNVMENCLANTRILKEGIEKTGRFKIVSKDIGVPLVAFSLKDSSKHTVFEIADHLRKYGWIVPAYTMPADAKHIAVLRVVIREDFSCSLAERLVSDIEKVVNLLDTLPSSINSKDAHVAVIASETSEEVKKDITETHAEILRYWKKLVDGKRVGAC*