Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066220 | XP_003623847.1 | 96.737 | 613 | 18 | 2 | 1 | 612 | 1 | 612 | 0.0 | 1228 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066220 | sp|Q9LPD2|GENL1_ARATH | 54.160 | 613 | 264 | 8 | 1 | 611 | 1 | 598 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066220 | A2Q3P8 | 96.737 | 613 | 18 | 2 | 1 | 612 | 1 | 612 | 0.0 | 1228 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1066220 | Msa1155210 | 0.833612 | 4.825880e-56 | -8.615850e-47 |
| Msa1066220 | Msa1196440 | 0.802753 | 4.829520e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066220 | MtrunA17_Chr7g0246801 | 96.737 | 613 | 18 | 2 | 1 | 612 | 1 | 612 | 0.0 | 1228 |
| Msa1066220 | MtrunA17_Chr6g0470821 | 36.364 | 253 | 153 | 5 | 1 | 248 | 1 | 250 | 2.27e-35 | 140 |
| Msa1066220 | MtrunA17_Chr7g0228021 | 45.161 | 124 | 66 | 2 | 116 | 239 | 1026 | 1147 | 1.06e-21 | 100 |
| Msa1066220 | MtrunA17_Chr1g0193411 | 29.537 | 281 | 166 | 13 | 1 | 256 | 1 | 274 | 3.62e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066220 | AT1G01880.3 | 54.160 | 613 | 264 | 8 | 1 | 611 | 1 | 598 | 0.0 | 642 |
| Msa1066220 | AT1G01880.1 | 54.160 | 613 | 264 | 8 | 1 | 611 | 1 | 598 | 0.0 | 642 |
| Msa1066220 | AT1G01880.2 | 53.997 | 613 | 264 | 9 | 1 | 611 | 1 | 597 | 0.0 | 637 |
| Msa1066220 | AT1G01880.4 | 51.002 | 549 | 252 | 8 | 65 | 611 | 7 | 540 | 0.0 | 529 |
| Msa1066220 | AT3G48900.2 | 35.060 | 251 | 155 | 5 | 1 | 246 | 1 | 248 | 2.54e-31 | 129 |
| Msa1066220 | AT3G28030.4 | 27.852 | 298 | 172 | 8 | 116 | 413 | 731 | 985 | 6.75e-23 | 104 |
| Msa1066220 | AT3G28030.2 | 27.852 | 298 | 172 | 8 | 116 | 413 | 923 | 1177 | 6.92e-23 | 104 |
| Msa1066220 | AT3G28030.3 | 27.213 | 305 | 165 | 8 | 116 | 413 | 949 | 1203 | 9.23e-23 | 104 |
| Msa1066220 | AT3G28030.1 | 27.213 | 305 | 165 | 8 | 116 | 413 | 923 | 1177 | 9.33e-23 | 104 |
| Msa1066220 | AT3G48900.3 | 41.791 | 134 | 77 | 1 | 113 | 246 | 52 | 184 | 9.73e-21 | 96.7 |
| Msa1066220 | AT3G48900.1 | 41.791 | 134 | 77 | 1 | 113 | 246 | 52 | 184 | 1.00e-20 | 96.7 |
| Msa1066220 | AT5G26680.2 | 26.780 | 295 | 168 | 12 | 16 | 271 | 19 | 304 | 1.55e-16 | 82.4 |
| Msa1066220 | AT5G26680.5 | 26.780 | 295 | 168 | 12 | 16 | 271 | 19 | 304 | 4.53e-16 | 81.3 |
| Msa1066220 | AT5G26680.4 | 26.780 | 295 | 168 | 12 | 16 | 271 | 19 | 304 | 4.53e-16 | 81.3 |
| Msa1066220 | AT5G26680.3 | 26.780 | 295 | 168 | 12 | 16 | 271 | 19 | 304 | 4.53e-16 | 81.3 |
| Msa1066220 | AT5G26680.1 | 26.780 | 295 | 168 | 12 | 16 | 271 | 19 | 304 | 5.41e-16 | 81.3 |
Find 136 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGACCTTCACTATTTAAT+TGG | 0.053466 | 7_2:+60189477 | None:intergenic |
| ATTTCATCCTTTGGAAAATT+TGG | 0.099249 | 7_2:+60187768 | None:intergenic |
| GACAGTGATGCATTCCTCTT+TGG | 0.175216 | 7_2:-60189434 | Msa1066220:CDS |
| CCAACCGATAGTTTGCTATT+TGG | 0.175622 | 7_2:-60187426 | Msa1066220:CDS |
| AGGCGACGCCTAACAGATTT+TGG | 0.191704 | 7_2:+60186636 | None:intergenic |
| GTCATGAACACAAAATTAAA+AGG | 0.198863 | 7_2:+60186493 | None:intergenic |
| TGGGTGTTGGTGGTAATTTC+TGG | 0.201430 | 7_2:-60191181 | Msa1066220:CDS |
| GATGACTCTTCTCCATGTTT+TGG | 0.212072 | 7_2:+60186732 | None:intergenic |
| TTTGTAGTTTGGAGCATTTC+CGG | 0.225638 | 7_2:-60189980 | Msa1066220:intron |
| TTTCTGCTTAATCACGATAA+TGG | 0.232626 | 7_2:+60191221 | None:intergenic |
| CCTAATAGCTATCTCTCTTT+TGG | 0.274761 | 7_2:-60188663 | Msa1066220:CDS |
| TGTGTAGTTAACAATTAGTT+TGG | 0.277864 | 7_2:-60186446 | Msa1066220:three_prime_UTR |
| ATCCATCTTCTTCACAAATC+TGG | 0.278684 | 7_2:+60187214 | None:intergenic |
| CAACCGATAGTTTGCTATTT+GGG | 0.292855 | 7_2:-60187425 | Msa1066220:CDS |
| CATTAAAGCTGAGGAAAATA+TGG | 0.298254 | 7_2:-60188212 | Msa1066220:CDS |
| TTGCTATTGATTTATCGTTT+TGG | 0.299838 | 7_2:-60191100 | Msa1066220:CDS |
| ACAGTGATGCATTCCTCTTT+GGG | 0.302361 | 7_2:-60189433 | Msa1066220:CDS |
| GGACTTGACGATTTCCTCTT+TGG | 0.304845 | 7_2:+60186666 | None:intergenic |
| CTCATGGGAAAGACCGAATA+TGG | 0.314813 | 7_2:-60187559 | Msa1066220:CDS |
| ACGGTCACTTACTTTGGAAT+TGG | 0.315064 | 7_2:+60189382 | None:intergenic |
| CTGCTCATTCTGTGGGCATC+CGG | 0.316217 | 7_2:-60188152 | Msa1066220:CDS |
| TTCTGCTTAATCACGATAAT+GGG | 0.323889 | 7_2:+60191222 | None:intergenic |
| AAAACCTTCATTGCGTGAAT+AGG | 0.329105 | 7_2:+60191145 | None:intergenic |
| TGCATGCCAGATTTATTTGC+CGG | 0.335933 | 7_2:+60187300 | None:intergenic |
| TTTCCGGTGTTCGTTGTTGA+TGG | 0.338247 | 7_2:-60189964 | Msa1066220:CDS |
| ATGAAAATATGGACCTTGTT+GGG | 0.338687 | 7_2:-60187173 | Msa1066220:CDS |
| AAACCTTCATTGCGTGAATA+GGG | 0.344866 | 7_2:+60191146 | None:intergenic |
| TCTGTTGACAGATGAAAATA+TGG | 0.352773 | 7_2:-60187184 | Msa1066220:CDS |
| CAAGCTAGTCGACTCAATTC+CGG | 0.360228 | 7_2:+60189888 | None:intergenic |
| CCAAAAGAGAGATAGCTATT+AGG | 0.366111 | 7_2:+60188663 | None:intergenic |
| ATATCAATGATTTCATCCTT+TGG | 0.375355 | 7_2:+60187759 | None:intergenic |
| CGGTCACTTACTTTGGAATT+GGG | 0.384232 | 7_2:+60189383 | None:intergenic |
| GGGTGTTGGTGGTAATTTCT+GGG | 0.384908 | 7_2:-60191180 | Msa1066220:CDS |
| AATTGAGTCGACTAGCTTGC+CGG | 0.386864 | 7_2:-60189884 | Msa1066220:CDS |
| AGGTTTCGTATGTTACTGTT+AGG | 0.388087 | 7_2:+60191295 | Msa1066230:intron |
| ATGACCTTCACTATTTAATT+GGG | 0.390559 | 7_2:+60189478 | None:intergenic |
| GTTGCTGAAGGTGTTTCAGC+TGG | 0.398811 | 7_2:-60189862 | Msa1066220:CDS |
| CTGAGGTGAGGTTTCTTGAC+AGG | 0.400391 | 7_2:+60191047 | None:intergenic |
| AAAACTCCGGCAAATAAATC+TGG | 0.403594 | 7_2:-60187306 | Msa1066220:CDS |
| AAGACCGAATATGGACCTTC+TGG | 0.404898 | 7_2:-60187550 | Msa1066220:CDS |
| GTGAAGATGATATATTGAAT+AGG | 0.410092 | 7_2:-60188565 | Msa1066220:intron |
| AAGAAGATGGTTGACATCAT+AGG | 0.410471 | 7_2:+60187468 | None:intergenic |
| TCAGATATTGAAGCTGGGCT+TGG | 0.410473 | 7_2:-60188701 | Msa1066220:CDS |
| TCCATCTTCTTCACAAATCT+GGG | 0.412006 | 7_2:+60187215 | None:intergenic |
| TTTAAATTTGCAGGAATTGA+AGG | 0.414875 | 7_2:-60186883 | Msa1066220:intron |
| AACCATCTTCTTGAGAGAAA+TGG | 0.422847 | 7_2:-60187457 | Msa1066220:CDS |
| CAGAAGAAGTGAAAAGGTTC+CGG | 0.426642 | 7_2:-60187140 | Msa1066220:CDS |
| GAAAAGGTTCCGGCAGGAAC+AGG | 0.426754 | 7_2:-60187130 | Msa1066220:intron |
| TAGGAACTTGCTAAGCTACT+TGG | 0.427518 | 7_2:-60189545 | Msa1066220:CDS |
| TCCTCAGCTTTAATGTCAAT+AGG | 0.430541 | 7_2:+60188220 | None:intergenic |
| CTAATATTCCAAAATCTGTT+AGG | 0.432669 | 7_2:-60186644 | Msa1066220:CDS |
| CCCCAGATTTGTGAAGAAGA+TGG | 0.435198 | 7_2:-60187216 | Msa1066220:CDS |
| TTCCGGTGTTCGTTGTTGAT+GGG | 0.436636 | 7_2:-60189963 | Msa1066220:CDS |
| CAATCACATTTAAAACCCTC+TGG | 0.439253 | 7_2:+60188055 | None:intergenic |
| TACGATTTGAGTGGTGTTCA+AGG | 0.445818 | 7_2:-60188629 | Msa1066220:CDS |
| TCAACCAGAAGGTCCATATT+CGG | 0.445944 | 7_2:+60187546 | None:intergenic |
| GATGAAAATATGGACCTTGT+TGG | 0.449635 | 7_2:-60187174 | Msa1066220:CDS |
| TTGTGAAACAGACACTGAAC+AGG | 0.456878 | 7_2:+60191275 | Msa1066230:intron |
| GCTGAAACACCTTCAGCAAC+CGG | 0.462313 | 7_2:+60189865 | None:intergenic |
| AATATGTCAGATATTGAAGC+TGG | 0.465572 | 7_2:-60188707 | Msa1066220:CDS |
| AGCCATTTCTCTCAAGAAGA+TGG | 0.471480 | 7_2:+60187455 | None:intergenic |
| ACTTTGTTTGCAGTGAATGA+TGG | 0.475062 | 7_2:-60187591 | Msa1066220:intron |
| GTCAAGTGGAAACGTGCAAT+GGG | 0.475276 | 7_2:-60187342 | Msa1066220:CDS |
| TGCTCATTCTGTGGGCATCC+GGG | 0.483415 | 7_2:-60188151 | Msa1066220:CDS |
| GACATATTGTAGCATTCAAA+CGG | 0.484489 | 7_2:+60188722 | None:intergenic |
| TCTCCTTTAGCCTTCAGTAC+AGG | 0.490882 | 7_2:+60189518 | None:intergenic |
| CACACTACTAGTCAAACAAA+AGG | 0.494721 | 7_2:+60186616 | None:intergenic |
| AAGCCCTATTCACGCAATGA+AGG | 0.496872 | 7_2:-60191149 | Msa1066220:CDS |
| CAATGCAGATTACATGAGAT+AGG | 0.498331 | 7_2:-60188265 | Msa1066220:intron |
| AAGAGGAATGCATCACTGTC+AGG | 0.499239 | 7_2:+60189437 | None:intergenic |
| AGAACTCTGTAATATTTAGC+TGG | 0.501446 | 7_2:+60186781 | None:intergenic |
| CGCCGTTGAAAACAAAGGCC+AGG | 0.503552 | 7_2:-60189933 | Msa1066220:CDS |
| CTTTCCCAGAAGAAGTGAAA+AGG | 0.503622 | 7_2:-60187146 | Msa1066220:CDS |
| ATGACAGAATAGGAAACATA+AGG | 0.503679 | 7_2:-60187847 | Msa1066220:intron |
| GACGATTAATCTCTTCTCAA+AGG | 0.504394 | 7_2:-60191009 | Msa1066220:intron |
| GAGGAAAATATGGATATTGA+CGG | 0.504501 | 7_2:-60188202 | Msa1066220:CDS |
| ATATTAACTGAATGTTGAAA+AGG | 0.505470 | 7_2:-60186527 | Msa1066220:three_prime_UTR |
| AGGAACTTGCTAAGCTACTT+GGG | 0.506203 | 7_2:-60189544 | Msa1066220:CDS |
| CACACTGAACTAACTGCCCT+TGG | 0.507097 | 7_2:+60186471 | None:intergenic |
| ACTGGGATCCGTCATACATT+CGG | 0.507228 | 7_2:-60187503 | Msa1066220:CDS |
| AATTCAATCATGGGTGTTGG+TGG | 0.511542 | 7_2:-60191191 | Msa1066220:exon |
| TGAGGTGAGGTTTCTTGACA+GGG | 0.512535 | 7_2:+60191048 | None:intergenic |
| TGATTGCAACTCTTGTTGTA+TGG | 0.514556 | 7_2:-60188038 | Msa1066220:intron |
| ATTAATTCAATCATGGGTGT+TGG | 0.517628 | 7_2:-60191194 | Msa1066220:exon |
| AAATATTGCCTTTAAAACTC+CGG | 0.521421 | 7_2:-60187319 | Msa1066220:CDS |
| TGTGTCGCGGATGGCAATGA+AGG | 0.522660 | 7_2:-60188091 | Msa1066220:CDS |
| ATGACGGATCCCAGTTCTGA+TGG | 0.524536 | 7_2:+60187511 | None:intergenic |
| AAAACTATTAATTCAATCAT+GGG | 0.524632 | 7_2:-60191200 | Msa1066220:exon |
| TCAACATCACCAAACTCAAA+AGG | 0.525832 | 7_2:-60186807 | Msa1066220:CDS |
| ATGATGGACCTCAGATCTCA+TGG | 0.526994 | 7_2:-60187575 | Msa1066220:CDS |
| CAAACTCACTGCTCATTCTG+TGG | 0.528123 | 7_2:-60188160 | Msa1066220:CDS |
| ACTAGCTTGCCGGTTGCTGA+AGG | 0.530300 | 7_2:-60189874 | Msa1066220:CDS |
| TCGACTCAATTCCGGAAGAC+CGG | 0.531944 | 7_2:+60189896 | None:intergenic |
| TTGCTGAAGGTGTTTCAGCT+GGG | 0.532020 | 7_2:-60189861 | Msa1066220:CDS |
| TTGAGTGGTGTTCAAGGGAT+CGG | 0.533209 | 7_2:-60188623 | Msa1066220:CDS |
| TCATGAACACAAAATTAAAA+GGG | 0.536095 | 7_2:+60186494 | None:intergenic |
| TCCTATTGACATTAAAGCTG+AGG | 0.538234 | 7_2:-60188221 | Msa1066220:CDS |
| TGTCAAGTGGAAACGTGCAA+TGG | 0.549796 | 7_2:-60187343 | Msa1066220:CDS |
| AAACGTGTGAAGACGAGATA+CGG | 0.554447 | 7_2:-60187381 | Msa1066220:CDS |
| TAATGCATTTAGCCCCAAAG+AGG | 0.555621 | 7_2:+60189420 | None:intergenic |
| TTTAAACTTCCATCAGAACT+GGG | 0.555624 | 7_2:-60187520 | Msa1066220:CDS |
| TTTGACATCAAATTTACAAG+AGG | 0.560154 | 7_2:-60186385 | Msa1066220:three_prime_UTR |
| CAGTGATGCATTCCTCTTTG+GGG | 0.562537 | 7_2:-60189432 | Msa1066220:CDS |
| ATTCCTGTACTGAAGGCTAA+AGG | 0.568014 | 7_2:-60189521 | Msa1066220:CDS |
| TAATAAATACCTGTTCCTGC+CGG | 0.568278 | 7_2:+60187121 | None:intergenic |
| AGGAAAATATGGATATTGAC+GGG | 0.569377 | 7_2:-60188201 | Msa1066220:CDS |
| AAACTCACTGCTCATTCTGT+GGG | 0.570395 | 7_2:-60188159 | Msa1066220:CDS |
| ACGATTTGAGTGGTGTTCAA+GGG | 0.573182 | 7_2:-60188628 | Msa1066220:CDS |
| AGAAGTGAAAAGGTTCCGGC+AGG | 0.576018 | 7_2:-60187136 | Msa1066220:CDS |
| CTGCCCAAATAGCAAACTAT+CGG | 0.576488 | 7_2:+60187422 | None:intergenic |
| AGATTACATGAGATAGGCAA+AGG | 0.579994 | 7_2:-60188259 | Msa1066220:CDS |
| GATTACATGAGATAGGCAAA+GGG | 0.589882 | 7_2:-60188258 | Msa1066220:CDS |
| ACTTGGGATTCCTGTACTGA+AGG | 0.589944 | 7_2:-60189528 | Msa1066220:CDS |
| CTGGGAAAGCAGCCCCAACA+AGG | 0.592639 | 7_2:+60187160 | None:intergenic |
| ATAATCCGCCGAATGTATGA+CGG | 0.593450 | 7_2:+60187495 | None:intergenic |
| TGAAAATATGGACCTTGTTG+GGG | 0.600292 | 7_2:-60187172 | Msa1066220:CDS |
| GTCCCATCAACAACGAACAC+CGG | 0.600640 | 7_2:+60189961 | None:intergenic |
| CCAAATAGCAAACTATCGGT+TGG | 0.605787 | 7_2:+60187426 | None:intergenic |
| GGTCTTTCCCATGAGATCTG+AGG | 0.617897 | 7_2:+60187567 | None:intergenic |
| ATATGTCAGATATTGAAGCT+GGG | 0.620721 | 7_2:-60188706 | Msa1066220:CDS |
| GGAAATGATTACGATTTGAG+TGG | 0.621724 | 7_2:-60188638 | Msa1066220:CDS |
| TGTGCCCAATTAAATAGTGA+AGG | 0.623153 | 7_2:-60189482 | Msa1066220:CDS |
| CTGAAGGTGTTTCAGCTGGG+AGG | 0.624980 | 7_2:-60189858 | Msa1066220:CDS |
| AGTAAACAAAATCCAAAACA+TGG | 0.628201 | 7_2:-60186744 | Msa1066220:CDS |
| GAGGTGAGGTTTCTTGACAG+GGG | 0.631952 | 7_2:+60191049 | None:intergenic |
| TGATGGACCTCAGATCTCAT+GGG | 0.634706 | 7_2:-60187574 | Msa1066220:CDS |
| AAGCTGGGCTTGGATTGAAG+AGG | 0.636947 | 7_2:-60188691 | Msa1066220:CDS |
| TCCATCGCCGTTGAAAACAA+AGG | 0.640354 | 7_2:-60189938 | Msa1066220:CDS |
| CCATCTTCTTCACAAATCTG+GGG | 0.640984 | 7_2:+60187216 | None:intergenic |
| AAGATGTGTTCAAGAGTGTG+TGG | 0.672457 | 7_2:-60189821 | Msa1066220:intron |
| AAAACTGACAGCCAAGACAG+TGG | 0.673578 | 7_2:-60186699 | Msa1066220:CDS |
| GTGGAGGCTCAAAACCAAAG+AGG | 0.681076 | 7_2:-60186680 | Msa1066220:CDS |
| ACTGACAGCCAAGACAGTGG+AGG | 0.684171 | 7_2:-60186696 | Msa1066220:CDS |
| AATCTGTGACAAGATTGCAA+AGG | 0.695313 | 7_2:-60187793 | Msa1066220:CDS |
| GCTTGATGTTGATGAAACAG+TGG | 0.705087 | 7_2:-60187262 | Msa1066220:CDS |
| ATGTATCTATGCAATGACAA+TGG | 0.712623 | 7_2:-60187738 | Msa1066220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTAATATAATCAAAA+GGG | + | chr7_2:60186809-60186828 | None:intergenic | 10.0% |
| !!! | TTTTTTCTAATATAATCAAA+AGG | + | chr7_2:60186810-60186829 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTTATAATCAAAA+GGG | + | chr7_2:60187002-60187021 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTATAATCAAA+AGG | + | chr7_2:60187003-60187022 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTATATAATCAAA+AGG | + | chr7_2:60187157-60187176 | None:intergenic | 10.0% |
| !!! | TAATAATTTTTTTTGTAGTT+TGG | - | chr7_2:60187727-60187746 | Msa1066220:CDS | 10.0% |
| !!! | ATGTTTTTTTACTATATTTT+TGG | - | chr7_2:60189782-60189801 | Msa1066220:intron | 10.0% |
| !!! | ATTTTTTTAGTATTTTTCAA+AGG | - | chr7_2:60189831-60189850 | Msa1066220:CDS | 10.0% |
| !! | AAAAACTATTAATTCAATCA+TGG | - | chr7_2:60186517-60186536 | Msa1066220:three_prime_UTR | 15.0% |
| !! | AAAACTATTAATTCAATCAT+GGG | - | chr7_2:60186518-60186537 | Msa1066220:three_prime_UTR | 15.0% |
| !! | AAAAAAATTAAGTGATTGTT+TGG | - | chr7_2:60186824-60186843 | Msa1066220:CDS | 15.0% |
| !!! | AAAAAAATTGAGAGATTTTT+TGG | - | chr7_2:60187016-60187035 | Msa1066220:intron | 15.0% |
| !!! | AAAAAAATTTAGAGTTTGTT+TGG | - | chr7_2:60187171-60187190 | Msa1066220:CDS | 15.0% |
| !!! | TCAATTTTTCTCTTTTAAAA+GGG | + | chr7_2:60187342-60187361 | None:intergenic | 15.0% |
| !! | AATCAGAGTTTATATTATAA+TGG | + | chr7_2:60188401-60188420 | None:intergenic | 15.0% |
| !! | TTATAATATAAACTCTGATT+TGG | - | chr7_2:60188401-60188420 | Msa1066220:intron | 15.0% |
| !! | CTATTAATCTAAATTTAACA+TGG | + | chr7_2:60188814-60188833 | None:intergenic | 15.0% |
| !! | AAAATAATTAACCATTTAAG+GGG | + | chr7_2:60190744-60190763 | None:intergenic | 15.0% |
| !! | CAAAATAATTAACCATTTAA+GGG | + | chr7_2:60190745-60190764 | None:intergenic | 15.0% |
| !! | TCAAAATAATTAACCATTTA+AGG | + | chr7_2:60190746-60190765 | None:intergenic | 15.0% |
| !! | TATAAATGATTTAAATTTGC+AGG | - | chr7_2:60190826-60190845 | Msa1066220:intron | 15.0% |
| !!! | AGAAAGAGTGTTTTTTTTTT+TGG | + | chr7_2:60186382-60186401 | None:intergenic | 20.0% |
| !!! | AAAATGTGTTTTTACCTTTT+TGG | - | chr7_2:60187224-60187243 | Msa1066220:CDS | 20.0% |
| !!! | CTCAATTTTTCTCTTTTAAA+AGG | + | chr7_2:60187343-60187362 | None:intergenic | 20.0% |
| !!! | AAAATTGAGAGATTGTTTTA+TGG | - | chr7_2:60187354-60187373 | Msa1066220:CDS | 20.0% |
| !!! | AAATTGAGAGATTGTTTTAT+GGG | - | chr7_2:60187355-60187374 | Msa1066220:CDS | 20.0% |
| !! | CAATTTGAATTACTTATCAT+TGG | - | chr7_2:60187557-60187576 | Msa1066220:CDS | 20.0% |
| !! | AACATATTGGTAGAAAAATT+AGG | + | chr7_2:60188004-60188023 | None:intergenic | 20.0% |
| !!! | GTCATATGACTTTTATTAAA+TGG | - | chr7_2:60188476-60188495 | Msa1066220:intron | 20.0% |
| !! | TGGTTTAATTGATAAGAATA+CGG | - | chr7_2:60188844-60188863 | Msa1066220:intron | 20.0% |
| !! | TGATATTTATATGACAGAAT+AGG | - | chr7_2:60189861-60189880 | Msa1066220:CDS | 20.0% |
| !! | ATATTAACTGAATGTTGAAA+AGG | - | chr7_2:60191191-60191210 | Msa1066220:exon | 20.0% |
| !! | TCATGAACACAAAATTAAAA+GGG | + | chr7_2:60191227-60191246 | None:intergenic | 20.0% |
| !!! | TTGCTATTGATTTATCGTTT+TGG | - | chr7_2:60186618-60186637 | Msa1066220:exon | 25.0% |
| ! | TGAAACAAAAACACAATGAA+GGG | + | chr7_2:60186747-60186766 | None:intergenic | 25.0% |
| ! | ATGAAACAAAAACACAATGA+AGG | + | chr7_2:60186748-60186767 | None:intergenic | 25.0% |
| !!! | TTCATTGTGTTTTTGTTTCA+TGG | - | chr7_2:60186747-60186766 | Msa1066220:CDS | 25.0% |
| !!! | ATTAAGTGATTGTTTGGTTT+TGG | - | chr7_2:60186830-60186849 | Msa1066220:CDS | 25.0% |
| !!! | TTAAGTGATTGTTTGGTTTT+GGG | - | chr7_2:60186831-60186850 | Msa1066220:CDS | 25.0% |
| ! | ACACACAAACATAACAAAAA+AGG | + | chr7_2:60186895-60186914 | None:intergenic | 25.0% |
| !! | AAATTTAGAGTTTGTTTGGT+TGG | - | chr7_2:60187175-60187194 | Msa1066220:CDS | 25.0% |
| !! | AATTTAGAGTTTGTTTGGTT+GGG | - | chr7_2:60187176-60187195 | Msa1066220:CDS | 25.0% |
| ! | GAATATTAAACCAAACGTTA+TGG | + | chr7_2:60187455-60187474 | None:intergenic | 25.0% |
| !!! | AAAACGTGTTATTACCTTTT+TGG | - | chr7_2:60187488-60187507 | Msa1066220:CDS | 25.0% |
| ! | ATACTCAAACATAACCAAAA+AGG | + | chr7_2:60187505-60187524 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTATGTTTGAGTA+TGG | - | chr7_2:60187504-60187523 | Msa1066220:CDS | 25.0% |
| ! | ATTAACCTTCAATTTGTGTT+TGG | + | chr7_2:60187532-60187551 | None:intergenic | 25.0% |
| ! | CTGGAAAGTAAATAAGATTT+GGG | + | chr7_2:60188067-60188086 | None:intergenic | 25.0% |
| ! | TCTGGAAAGTAAATAAGATT+TGG | + | chr7_2:60188068-60188087 | None:intergenic | 25.0% |
| ! | CCTTAAAGCTATATGTTAAT+CGG | - | chr7_2:60188147-60188166 | Msa1066220:CDS | 25.0% |
| ! | ATGACCTTCACTATTTAATT+GGG | + | chr7_2:60188243-60188262 | None:intergenic | 25.0% |
| ! | TAAAGAAAATACAATGACGA+CGG | + | chr7_2:60188358-60188377 | None:intergenic | 25.0% |
| ! | GTTTATATTATAATGGCTGA+AGG | + | chr7_2:60188394-60188413 | None:intergenic | 25.0% |
| ! | ATTAAATGGTAGCATACTAT+AGG | - | chr7_2:60188490-60188509 | Msa1066220:intron | 25.0% |
| ! | GGTTTAATTGATAAGAATAC+GGG | - | chr7_2:60188845-60188864 | Msa1066220:intron | 25.0% |
| ! | GTGAAGATGATATATTGAAT+AGG | - | chr7_2:60189153-60189172 | Msa1066220:intron | 25.0% |
| !! | ATATATGCATTTTACTCAGA+AGG | + | chr7_2:60189192-60189211 | None:intergenic | 25.0% |
| ! | TATGATATAGGTGTAGAATA+GGG | + | chr7_2:60189337-60189356 | None:intergenic | 25.0% |
| ! | TAACATGAAAGCTATGATAT+AGG | + | chr7_2:60189349-60189368 | None:intergenic | 25.0% |
| !! | GATGAACAGAATAAAACTTT+TGG | - | chr7_2:60189401-60189420 | Msa1066220:CDS | 25.0% |
| !!! | AATAAAACTTTTGGTCTTTG+TGG | - | chr7_2:60189410-60189429 | Msa1066220:CDS | 25.0% |
| ! | ATTGAAGATCATATTCAATC+AGG | + | chr7_2:60189437-60189456 | None:intergenic | 25.0% |
| !!! | AGTGAGTTTGTTTTGTATTT+GGG | + | chr7_2:60189548-60189567 | None:intergenic | 25.0% |
| ! | CTAGAAAAAGTCTACTTTAT+TGG | + | chr7_2:60189808-60189827 | None:intergenic | 25.0% |
| !! | ATTTCATCCTTTGGAAAATT+TGG | + | chr7_2:60189953-60189972 | None:intergenic | 25.0% |
| ! | ATATCAATGATTTCATCCTT+TGG | + | chr7_2:60189962-60189981 | None:intergenic | 25.0% |
| ! | AGTTTAAAAAATCAACCAGA+AGG | + | chr7_2:60190186-60190205 | None:intergenic | 25.0% |
| !!! | AAATATTGCCTTTAAAACTC+CGG | - | chr7_2:60190399-60190418 | Msa1066220:intron | 25.0% |
| ! | ATTATTTCATATCTAGCGTT+TGG | - | chr7_2:60190616-60190635 | Msa1066220:intron | 25.0% |
| !! | TTTAATGCTGCTTAATTAAG+TGG | + | chr7_2:60190721-60190740 | None:intergenic | 25.0% |
| !!! | TTTGACTTTTAGAATCATCT+TGG | - | chr7_2:60190761-60190780 | Msa1066220:intron | 25.0% |
| ! | ATTTATATCTCAACACAGAA+TGG | + | chr7_2:60190813-60190832 | None:intergenic | 25.0% |
| ! | TTTAAATTTGCAGGAATTGA+AGG | - | chr7_2:60190835-60190854 | Msa1066220:intron | 25.0% |
| !! | TTCATTTTCTTGAGATATTG+AGG | + | chr7_2:60190885-60190904 | None:intergenic | 25.0% |
| !!! | TTTGTTTACTTTTCGTTGTT+GGG | + | chr7_2:60190964-60190983 | None:intergenic | 25.0% |
| !!! | TTTTGTTTACTTTTCGTTGT+TGG | + | chr7_2:60190965-60190984 | None:intergenic | 25.0% |
| ! | AGTAAACAAAATCCAAAACA+TGG | - | chr7_2:60190974-60190993 | Msa1066220:intron | 25.0% |
| !!! | CTAACAGATTTTGGAATATT+AGG | + | chr7_2:60191076-60191095 | None:intergenic | 25.0% |
| ! | CTAATATTCCAAAATCTGTT+AGG | - | chr7_2:60191074-60191093 | Msa1066220:CDS | 25.0% |
| !! | GTGTATAAAATATGCTTTTG+AGG | - | chr7_2:60191122-60191141 | Msa1066220:CDS | 25.0% |
| !!! | TAAAATATGCTTTTGAGGAT+TGG | - | chr7_2:60191127-60191146 | Msa1066220:CDS | 25.0% |
| ! | GTCATGAACACAAAATTAAA+AGG | + | chr7_2:60191228-60191247 | None:intergenic | 25.0% |
| ! | TGTGTAGTTAACAATTAGTT+TGG | - | chr7_2:60191272-60191291 | Msa1066220:five_prime_UTR | 25.0% |
| ! | TTTGACATCAAATTTACAAG+AGG | - | chr7_2:60191333-60191352 | Msa1066220:five_prime_UTR | 25.0% |
| !! | TTAGGTTACGTTTTTGAAAG+AGG | + | chr7_2:60186408-60186427 | None:intergenic | 30.0% |
| TTCTGCTTAATCACGATAAT+GGG | + | chr7_2:60186499-60186518 | None:intergenic | 30.0% | |
| TTTCTGCTTAATCACGATAA+TGG | + | chr7_2:60186500-60186519 | None:intergenic | 30.0% | |
| ATTAATTCAATCATGGGTGT+TGG | - | chr7_2:60186524-60186543 | Msa1066220:three_prime_UTR | 30.0% | |
| ! | TTTTGTGTTGTGTTTGAGTA+TGG | - | chr7_2:60187046-60187065 | Msa1066220:intron | 30.0% |
| AGTATGGTTTAACAGCAATT+TGG | - | chr7_2:60187062-60187081 | Msa1066220:intron | 30.0% | |
| GTATGGTTTAACAGCAATTT+GGG | - | chr7_2:60187063-60187082 | Msa1066220:intron | 30.0% | |
| TATGGTTTAACAGCAATTTG+GGG | - | chr7_2:60187064-60187083 | Msa1066220:intron | 30.0% | |
| !!! | TGATGATTTTAGCTTCTTTG+TGG | - | chr7_2:60187105-60187124 | Msa1066220:intron | 30.0% |
| ACACTCAAACATAACCAAAA+AGG | + | chr7_2:60187241-60187260 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTTATGTTTGAGTG+TGG | - | chr7_2:60187240-60187259 | Msa1066220:CDS | 30.0% |
| TTGGTTGTATTTGAATTGAG+TGG | - | chr7_2:60187576-60187595 | Msa1066220:CDS | 30.0% | |
| GAGATATAGAAGCAACATAT+TGG | + | chr7_2:60188017-60188036 | None:intergenic | 30.0% | |
| ! | TCTTATTTACTTTCCAGATG+TGG | - | chr7_2:60188070-60188089 | Msa1066220:CDS | 30.0% |
| ! | CCGATTAACATATAGCTTTA+AGG | + | chr7_2:60188150-60188169 | None:intergenic | 30.0% |
| CATGACCTTCACTATTTAAT+TGG | + | chr7_2:60188244-60188263 | None:intergenic | 30.0% | |
| !!! | TTTTCTGGCTATATCTGTAT+AGG | - | chr7_2:60188541-60188560 | Msa1066220:intron | 30.0% |
| ! | TTTTCTTGATATGACTGATG+AGG | + | chr7_2:60188595-60188614 | None:intergenic | 30.0% |
| TTGGAAAAGACAAACTATCA+TGG | + | chr7_2:60188637-60188656 | None:intergenic | 30.0% | |
| TGTCATACATTGCTAAGTTA+CGG | + | chr7_2:60188666-60188685 | None:intergenic | 30.0% | |
| TTTAGATTAATAGCTGAGCT+TGG | - | chr7_2:60188821-60188840 | Msa1066220:intron | 30.0% | |
| AGAGGATCATTATAATTCTC+TGG | + | chr7_2:60188880-60188899 | None:intergenic | 30.0% | |
| AGAGAATTATAATGATCCTC+TGG | - | chr7_2:60188879-60188898 | Msa1066220:intron | 30.0% | |
| !! | AATTCGAAAAGTATTACCAG+AGG | + | chr7_2:60188898-60188917 | None:intergenic | 30.0% |
| AACTTTCCAAAATACAAGAG+GGG | + | chr7_2:60188938-60188957 | None:intergenic | 30.0% | |
| CAACTTTCCAAAATACAAGA+GGG | + | chr7_2:60188939-60188958 | None:intergenic | 30.0% | |
| TCAACTTTCCAAAATACAAG+AGG | + | chr7_2:60188940-60188959 | None:intergenic | 30.0% | |
| GACATATTGTAGCATTCAAA+CGG | + | chr7_2:60188999-60189018 | None:intergenic | 30.0% | |
| AATATGTCAGATATTGAAGC+TGG | - | chr7_2:60189011-60189030 | Msa1066220:intron | 30.0% | |
| ATATGTCAGATATTGAAGCT+GGG | - | chr7_2:60189012-60189031 | Msa1066220:intron | 30.0% | |
| GTTTCTTTACATGAATGGAA+TGG | + | chr7_2:60189242-60189261 | None:intergenic | 30.0% | |
| CTATGGTTTCTTTACATGAA+TGG | + | chr7_2:60189247-60189266 | None:intergenic | 30.0% | |
| GAGAAAGTGATAATAGAAAC+TGG | - | chr7_2:60189281-60189300 | Msa1066220:intron | 30.0% | |
| CTATGATATAGGTGTAGAAT+AGG | + | chr7_2:60189338-60189357 | None:intergenic | 30.0% | |
| ! | TTTTCATTTCCACTGTTTCA+TGG | + | chr7_2:60189373-60189392 | None:intergenic | 30.0% |
| CATTAAAGCTGAGGAAAATA+TGG | - | chr7_2:60189506-60189525 | Msa1066220:CDS | 30.0% | |
| GAGGAAAATATGGATATTGA+CGG | - | chr7_2:60189516-60189535 | Msa1066220:CDS | 30.0% | |
| AGGAAAATATGGATATTGAC+GGG | - | chr7_2:60189517-60189536 | Msa1066220:CDS | 30.0% | |
| !!! | GTGAGTTTGTTTTGTATTTG+GGG | + | chr7_2:60189547-60189566 | None:intergenic | 30.0% |
| !!! | CAGTGAGTTTGTTTTGTATT+TGG | + | chr7_2:60189549-60189568 | None:intergenic | 30.0% |
| ATGACAGAATAGGAAACATA+AGG | - | chr7_2:60189871-60189890 | Msa1066220:CDS | 30.0% | |
| AGCAGAAAAAGATGGAAAAT+TGG | - | chr7_2:60189894-60189913 | Msa1066220:CDS | 30.0% | |
| ATGTATCTATGCAATGACAA+TGG | - | chr7_2:60189980-60189999 | Msa1066220:intron | 30.0% | |
| !!! | AATGACAATGGTTACTTTTC+CGG | - | chr7_2:60189992-60190011 | Msa1066220:intron | 30.0% |
| ! | TTTTAAACTTCCATCAGAAC+TGG | - | chr7_2:60190197-60190216 | Msa1066220:intron | 30.0% |
| TTTAAACTTCCATCAGAACT+GGG | - | chr7_2:60190198-60190217 | Msa1066220:intron | 30.0% | |
| !! | TTTATTTGCCGGAGTTTTAA+AGG | + | chr7_2:60190410-60190429 | None:intergenic | 30.0% |
| TCTGTTGACAGATGAAAATA+TGG | - | chr7_2:60190534-60190553 | Msa1066220:intron | 30.0% | |
| ATGAAAATATGGACCTTGTT+GGG | - | chr7_2:60190545-60190564 | Msa1066220:intron | 30.0% | |
| TGATTCATAACCAACAAAAG+TGG | + | chr7_2:60190657-60190676 | None:intergenic | 30.0% | |
| ! | TTTTCTTGAGATATTGAGGT+CGG | + | chr7_2:60190881-60190900 | None:intergenic | 30.0% |
| AGAACTCTGTAATATTTAGC+TGG | + | chr7_2:60190940-60190959 | None:intergenic | 30.0% | |
| ! | TAATTTTGTGTTCATGACCA+AGG | - | chr7_2:60191230-60191249 | Msa1066220:five_prime_UTR | 30.0% |
| ! | AATTTTGTGTTCATGACCAA+GGG | - | chr7_2:60191231-60191250 | Msa1066220:five_prime_UTR | 30.0% |
| AGGTTTCGTATGTTACTGTT+AGG | + | chr7_2:60186426-60186445 | None:intergenic | 35.0% | |
| AAACCTTCATTGCGTGAATA+GGG | + | chr7_2:60186575-60186594 | None:intergenic | 35.0% | |
| AAAACCTTCATTGCGTGAAT+AGG | + | chr7_2:60186576-60186595 | None:intergenic | 35.0% | |
| !!! | ACCTCAGACTCACTTTTTTT+CGG | - | chr7_2:60186687-60186706 | Msa1066220:CDS | 35.0% |
| GACGATTAATCTCTTCTCAA+AGG | - | chr7_2:60186709-60186728 | Msa1066220:CDS | 35.0% | |
| AATTCATTAAGCCCCAATTG+CGG | + | chr7_2:60186925-60186944 | None:intergenic | 35.0% | |
| TGTGGTTCAACAGCAAATTA+CGG | - | chr7_2:60187258-60187277 | Msa1066220:CDS | 35.0% | |
| CAACAGCAAATTACGGTATA+AGG | - | chr7_2:60187265-60187284 | Msa1066220:CDS | 35.0% | |
| !! | TGAGAGATTGTTTTATGGGT+TGG | - | chr7_2:60187359-60187378 | Msa1066220:CDS | 35.0% |
| TCAAATTACGCCATAACGTT+TGG | - | chr7_2:60187442-60187461 | Msa1066220:CDS | 35.0% | |
| TGGTTCCAAACACAAATTGA+AGG | - | chr7_2:60187524-60187543 | Msa1066220:CDS | 35.0% | |
| !! | TTTAGTCTTGTGTGTTGAGT+TGG | - | chr7_2:60187652-60187671 | Msa1066220:intron | 35.0% |
| AGTCAAACTAAGGATGGAAT+TGG | - | chr7_2:60187683-60187702 | Msa1066220:intron | 35.0% | |
| ! | TTTGTAGTTTGGAGCATTTC+CGG | - | chr7_2:60187738-60187757 | Msa1066220:CDS | 35.0% |
| CGTTAATTCTTTCACCTTGA+TGG | - | chr7_2:60187922-60187941 | Msa1066220:intron | 35.0% | |
| TATATCTCATGTCAGAGTTC+AGG | - | chr7_2:60188029-60188048 | Msa1066220:intron | 35.0% | |
| GCTATATGTTAATCGGTGAT+AGG | - | chr7_2:60188154-60188173 | Msa1066220:CDS | 35.0% | |
| TGTGCCCAATTAAATAGTGA+AGG | - | chr7_2:60188236-60188255 | Msa1066220:CDS | 35.0% | |
| AGCTGTAAACTAAGCAAAGA+TGG | + | chr7_2:60188450-60188469 | None:intergenic | 35.0% | |
| ! | TGCTAAGTTACGGGAATTTT+TGG | + | chr7_2:60188656-60188675 | None:intergenic | 35.0% |
| GTCATACATTGCTAAGTTAC+GGG | + | chr7_2:60188665-60188684 | None:intergenic | 35.0% | |
| CAGATGGTATAATGTGAGTA+TGG | + | chr7_2:60188773-60188792 | None:intergenic | 35.0% | |
| !! | TGTATTTTGGAAAGTTGACG+TGG | - | chr7_2:60188942-60188961 | Msa1066220:intron | 35.0% |
| CCAAAAGAGAGATAGCTATT+AGG | + | chr7_2:60189058-60189077 | None:intergenic | 35.0% | |
| ! | CCTAATAGCTATCTCTCTTT+TGG | - | chr7_2:60189055-60189074 | Msa1066220:intron | 35.0% |
| ! | ATAGCTATCTCTCTTTTGGT+TGG | - | chr7_2:60189059-60189078 | Msa1066220:intron | 35.0% |
| GGAAATGATTACGATTTGAG+TGG | - | chr7_2:60189080-60189099 | Msa1066220:intron | 35.0% | |
| CAATGCAGATTACATGAGAT+AGG | - | chr7_2:60189453-60189472 | Msa1066220:CDS | 35.0% | |
| AGATTACATGAGATAGGCAA+AGG | - | chr7_2:60189459-60189478 | Msa1066220:CDS | 35.0% | |
| GATTACATGAGATAGGCAAA+GGG | - | chr7_2:60189460-60189479 | Msa1066220:CDS | 35.0% | |
| TCCTATTGACATTAAAGCTG+AGG | - | chr7_2:60189497-60189516 | Msa1066220:CDS | 35.0% | |
| ! | TCCTCAGCTTTAATGTCAAT+AGG | + | chr7_2:60189501-60189520 | None:intergenic | 35.0% |
| ! | AAATGATCTCTTTTGTTGCC+CGG | + | chr7_2:60189588-60189607 | None:intergenic | 35.0% |
| ! | TTCATGTGAATTTTGTGTCG+CGG | - | chr7_2:60189614-60189633 | Msa1066220:intron | 35.0% |
| ! | CAATCACATTTAAAACCCTC+TGG | + | chr7_2:60189666-60189685 | None:intergenic | 35.0% |
| ! | TGATTGCAACTCTTGTTGTA+TGG | - | chr7_2:60189680-60189699 | Msa1066220:intron | 35.0% |
| AAGTGCTCTGTCATCATATA+TGG | - | chr7_2:60189753-60189772 | Msa1066220:intron | 35.0% | |
| ACATAAGGAGCAGAAAAAGA+TGG | - | chr7_2:60189886-60189905 | Msa1066220:CDS | 35.0% | |
| AATCTGTGACAAGATTGCAA+AGG | - | chr7_2:60189925-60189944 | Msa1066220:CDS | 35.0% | |
| ! | AAAGGAGCCAAATTTTCCAA+AGG | - | chr7_2:60189943-60189962 | Msa1066220:CDS | 35.0% |
| TTCATCACAGTTAAACGTAC+CGG | + | chr7_2:60190014-60190033 | None:intergenic | 35.0% | |
| ! | ACTTTGTTTGCAGTGAATGA+TGG | - | chr7_2:60190127-60190146 | Msa1066220:intron | 35.0% |
| AAGAAGATGGTTGACATCAT+AGG | + | chr7_2:60190253-60190272 | None:intergenic | 35.0% | |
| AACCATCTTCTTGAGAGAAA+TGG | - | chr7_2:60190261-60190280 | Msa1066220:intron | 35.0% | |
| !! | CAACCGATAGTTTGCTATTT+GGG | - | chr7_2:60190293-60190312 | Msa1066220:intron | 35.0% |
| ! | ATCAGTTTTACGTTGTCAAG+TGG | - | chr7_2:60190362-60190381 | Msa1066220:intron | 35.0% |
| AAAACTCCGGCAAATAAATC+TGG | - | chr7_2:60190412-60190431 | Msa1066220:intron | 35.0% | |
| TCCATCTTCTTCACAAATCT+GGG | + | chr7_2:60190506-60190525 | None:intergenic | 35.0% | |
| ATCCATCTTCTTCACAAATC+TGG | + | chr7_2:60190507-60190526 | None:intergenic | 35.0% | |
| GATGAAAATATGGACCTTGT+TGG | - | chr7_2:60190544-60190563 | Msa1066220:intron | 35.0% | |
| TGAAAATATGGACCTTGTTG+GGG | - | chr7_2:60190546-60190565 | Msa1066220:intron | 35.0% | |
| TAATAAATACCTGTTCCTGC+CGG | + | chr7_2:60190600-60190619 | None:intergenic | 35.0% | |
| !! | CAACTATCATCCACTTTTGT+TGG | - | chr7_2:60190644-60190663 | Msa1066220:intron | 35.0% |
| GCTAATGATTAGCATCTAAC+TGG | - | chr7_2:60190686-60190705 | Msa1066220:intron | 35.0% | |
| !!! | TTTTGAGTTTGGTGATGTTG+AGG | + | chr7_2:60190912-60190931 | None:intergenic | 35.0% |
| TCAACATCACCAAACTCAAA+AGG | - | chr7_2:60190911-60190930 | Msa1066220:intron | 35.0% | |
| CACACTACTAGTCAAACAAA+AGG | + | chr7_2:60191105-60191124 | None:intergenic | 35.0% | |
| TTGTGAAACAGACACTGAAC+AGG | + | chr7_2:60186446-60186465 | None:intergenic | 40.0% | |
| !! | AATTCAATCATGGGTGTTGG+TGG | - | chr7_2:60186527-60186546 | Msa1066220:three_prime_UTR | 40.0% |
| ! | AAAAAAGTGAGTCTGAGGTG+AGG | + | chr7_2:60186686-60186705 | None:intergenic | 40.0% |
| TCCGAAAAAAAGTGAGTCTG+AGG | + | chr7_2:60186691-60186710 | None:intergenic | 40.0% | |
| TGGCGTAATTTGATCCATGT+AGG | + | chr7_2:60187435-60187454 | None:intergenic | 40.0% | |
| TTGAATTGAGTGGAGTGAAG+TGG | - | chr7_2:60187586-60187605 | Msa1066220:intron | 40.0% | |
| AGTGAAGTGGAGTTTGATAG+TGG | - | chr7_2:60187599-60187618 | Msa1066220:intron | 40.0% | |
| TGGAACAGTCAAACTAAGGA+TGG | - | chr7_2:60187677-60187696 | Msa1066220:intron | 40.0% | |
| !!! | ATCCTGGCCTTTGTTTTCAA+CGG | + | chr7_2:60187790-60187809 | None:intergenic | 40.0% |
| ! | CCAGGATTGCTAGATTTTTC+CGG | - | chr7_2:60187803-60187822 | Msa1066220:CDS | 40.0% |
| ! | AAGATGTGTTCAAGAGTGTG+TGG | - | chr7_2:60187897-60187916 | Msa1066220:intron | 40.0% |
| ! | GTGACTTGTGATAACCATCA+AGG | + | chr7_2:60187939-60187958 | None:intergenic | 40.0% |
| TGTACTTAGCTGCTAAAACG+TGG | - | chr7_2:60187970-60187989 | Msa1066220:intron | 40.0% | |
| TACTTTCCAGATGTGGATTC+TGG | - | chr7_2:60188077-60188096 | Msa1066220:CDS | 40.0% | |
| GAAAAACCAGAATCCACATC+TGG | + | chr7_2:60188086-60188105 | None:intergenic | 40.0% | |
| !! | TAGGAACTTGCTAAGCTACT+TGG | - | chr7_2:60188173-60188192 | Msa1066220:CDS | 40.0% |
| !! | AGGAACTTGCTAAGCTACTT+GGG | - | chr7_2:60188174-60188193 | Msa1066220:CDS | 40.0% |
| ATTCCTGTACTGAAGGCTAA+AGG | - | chr7_2:60188197-60188216 | Msa1066220:CDS | 40.0% | |
| ACAGTGATGCATTCCTCTTT+GGG | - | chr7_2:60188285-60188304 | Msa1066220:intron | 40.0% | |
| TAATGCATTTAGCCCCAAAG+AGG | + | chr7_2:60188301-60188320 | None:intergenic | 40.0% | |
| !! | CGGTCACTTACTTTGGAATT+GGG | + | chr7_2:60188338-60188357 | None:intergenic | 40.0% |
| !! | ACGGTCACTTACTTTGGAAT+TGG | + | chr7_2:60188339-60188358 | None:intergenic | 40.0% |
| ! | GCCAGAAAACTCAACTTGTT+GGG | + | chr7_2:60188530-60188549 | None:intergenic | 40.0% |
| AGCCAGAAAACTCAACTTGT+TGG | + | chr7_2:60188531-60188550 | None:intergenic | 40.0% | |
| GACAAACTATCATGGAAGAC+TGG | + | chr7_2:60188629-60188648 | None:intergenic | 40.0% | |
| ATGTGAGTATGGCAAGATGA+AGG | + | chr7_2:60188762-60188781 | None:intergenic | 40.0% | |
| !! | GTATGCATGCTTTTTGCAGA+TGG | + | chr7_2:60188789-60188808 | None:intergenic | 40.0% |
| AGATTAATAGCTGAGCTTGG+TGG | - | chr7_2:60188824-60188843 | Msa1066220:intron | 40.0% | |
| ! | TTCCTACCCCTCTTGTATTT+TGG | - | chr7_2:60188929-60188948 | Msa1066220:intron | 40.0% |
| TTCCAAAATACAAGAGGGGT+AGG | + | chr7_2:60188934-60188953 | None:intergenic | 40.0% | |
| ! | TTCTTTTCCTTTCTGCATGC+AGG | - | chr7_2:60188971-60188990 | Msa1066220:intron | 40.0% |
| TACGATTTGAGTGGTGTTCA+AGG | - | chr7_2:60189089-60189108 | Msa1066220:intron | 40.0% | |
| ACGATTTGAGTGGTGTTCAA+GGG | - | chr7_2:60189090-60189109 | Msa1066220:intron | 40.0% | |
| CTCTCAAATTCTCTCAGCTA+TGG | + | chr7_2:60189264-60189283 | None:intergenic | 40.0% | |
| TCATGTTAGCCATGAAACAG+TGG | - | chr7_2:60189361-60189380 | Msa1066220:intron | 40.0% | |
| AAACTCACTGCTCATTCTGT+GGG | - | chr7_2:60189559-60189578 | Msa1066220:intron | 40.0% | |
| AGGTTGCTTGAAAAAACCAG+AGG | - | chr7_2:60189647-60189666 | Msa1066220:intron | 40.0% | |
| GGTTGCTTGAAAAAACCAGA+GGG | - | chr7_2:60189648-60189667 | Msa1066220:intron | 40.0% | |
| ! | GCAACTCTTGTTGTATGGTA+TGG | - | chr7_2:60189685-60189704 | Msa1066220:intron | 40.0% |
| CAGTGACAAAATCGATCTAG+AGG | + | chr7_2:60189711-60189730 | None:intergenic | 40.0% | |
| TCAACCAGAAGGTCCATATT+CGG | + | chr7_2:60190175-60190194 | None:intergenic | 40.0% | |
| ATAATCCGCCGAATGTATGA+CGG | + | chr7_2:60190226-60190245 | None:intergenic | 40.0% | |
| AGCCATTTCTCTCAAGAAGA+TGG | + | chr7_2:60190266-60190285 | None:intergenic | 40.0% | |
| CCAAATAGCAAACTATCGGT+TGG | + | chr7_2:60190295-60190314 | None:intergenic | 40.0% | |
| !! | CCAACCGATAGTTTGCTATT+TGG | - | chr7_2:60190292-60190311 | Msa1066220:intron | 40.0% |
| CTGCCCAAATAGCAAACTAT+CGG | + | chr7_2:60190299-60190318 | None:intergenic | 40.0% | |
| AAACGTGTGAAGACGAGATA+CGG | - | chr7_2:60190337-60190356 | Msa1066220:intron | 40.0% | |
| TGCATGCCAGATTTATTTGC+CGG | + | chr7_2:60190421-60190440 | None:intergenic | 40.0% | |
| ! | GCTTGATGTTGATGAAACAG+TGG | - | chr7_2:60190456-60190475 | Msa1066220:intron | 40.0% |
| CCATCTTCTTCACAAATCTG+GGG | + | chr7_2:60190505-60190524 | None:intergenic | 40.0% | |
| CTTTCCCAGAAGAAGTGAAA+AGG | - | chr7_2:60190572-60190591 | Msa1066220:intron | 40.0% | |
| ! | GGAACCTTTTCACTTCTTCT+GGG | + | chr7_2:60190579-60190598 | None:intergenic | 40.0% |
| CAGAAGAAGTGAAAAGGTTC+CGG | - | chr7_2:60190578-60190597 | Msa1066220:intron | 40.0% | |
| GCAGCATTAAACCCCTTAAA+TGG | - | chr7_2:60190730-60190749 | Msa1066220:intron | 40.0% | |
| ! | GATGACTCTTCTCCATGTTT+TGG | + | chr7_2:60190989-60191008 | None:intergenic | 40.0% |
| !! | TGGGTGTTGGTGGTAATTTC+TGG | - | chr7_2:60186537-60186556 | Msa1066220:three_prime_UTR | 45.0% |
| !! | GGGTGTTGGTGGTAATTTCT+GGG | - | chr7_2:60186538-60186557 | Msa1066220:three_prime_UTR | 45.0% |
| AAGCCCTATTCACGCAATGA+AGG | - | chr7_2:60186569-60186588 | Msa1066220:three_prime_UTR | 45.0% | |
| TGAGGTGAGGTTTCTTGACA+GGG | + | chr7_2:60186673-60186692 | None:intergenic | 45.0% | |
| TGTGTAGTTCAGCCGCAATT+GGG | - | chr7_2:60186910-60186929 | Msa1066220:intron | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7_2:60187405-60187424 | Msa1066220:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr7_2:60187406-60187425 | Msa1066220:CDS | 45.0% |
| !! | TCTTGTGTGTTGAGTTGGCA+TGG | - | chr7_2:60187657-60187676 | Msa1066220:intron | 45.0% |
| GGCATGGAACAGTCAAACTA+AGG | - | chr7_2:60187673-60187692 | Msa1066220:intron | 45.0% | |
| TTTCCGGTGTTCGTTGTTGA+TGG | - | chr7_2:60187754-60187773 | Msa1066220:CDS | 45.0% | |
| TTCCGGTGTTCGTTGTTGAT+GGG | - | chr7_2:60187755-60187774 | Msa1066220:CDS | 45.0% | |
| TCCATCGCCGTTGAAAACAA+AGG | - | chr7_2:60187780-60187799 | Msa1066220:CDS | 45.0% | |
| CCGGAAAAATCTAGCAATCC+TGG | + | chr7_2:60187806-60187825 | None:intergenic | 45.0% | |
| ! | GCTAGATTTTTCCGGTCTTC+CGG | - | chr7_2:60187811-60187830 | Msa1066220:CDS | 45.0% |
| ! | CAAGCTAGTCGACTCAATTC+CGG | + | chr7_2:60187833-60187852 | None:intergenic | 45.0% |
| !! | AATTGAGTCGACTAGCTTGC+CGG | - | chr7_2:60187834-60187853 | Msa1066220:CDS | 45.0% |
| !! | TTGCTGAAGGTGTTTCAGCT+GGG | - | chr7_2:60187857-60187876 | Msa1066220:intron | 45.0% |
| ACTTGGGATTCCTGTACTGA+AGG | - | chr7_2:60188190-60188209 | Msa1066220:CDS | 45.0% | |
| ! | TCTCCTTTAGCCTTCAGTAC+AGG | + | chr7_2:60188203-60188222 | None:intergenic | 45.0% |
| AAGAGGAATGCATCACTGTC+AGG | + | chr7_2:60188284-60188303 | None:intergenic | 45.0% | |
| GACAGTGATGCATTCCTCTT+TGG | - | chr7_2:60188284-60188303 | Msa1066220:intron | 45.0% | |
| CAGTGATGCATTCCTCTTTG+GGG | - | chr7_2:60188286-60188305 | Msa1066220:intron | 45.0% | |
| ATGACGACGGTCACTTACTT+TGG | + | chr7_2:60188345-60188364 | None:intergenic | 45.0% | |
| !! | AACTCAACTTGTTGGGCACA+GGG | + | chr7_2:60188523-60188542 | None:intergenic | 45.0% |
| !! | AAACTCAACTTGTTGGGCAC+AGG | + | chr7_2:60188524-60188543 | None:intergenic | 45.0% |
| !! | GCCCAACAAGTTGAGTTTTC+TGG | - | chr7_2:60188526-60188545 | Msa1066220:intron | 45.0% |
| CTATCATGGAAGACTGGATG+AGG | + | chr7_2:60188623-60188642 | None:intergenic | 45.0% | |
| GAACTAACAGAAGTCTGACG+CGG | + | chr7_2:60188718-60188737 | None:intergenic | 45.0% | |
| TCAGATATTGAAGCTGGGCT+TGG | - | chr7_2:60189017-60189036 | Msa1066220:intron | 45.0% | |
| TTGAGTGGTGTTCAAGGGAT+CGG | - | chr7_2:60189095-60189114 | Msa1066220:intron | 45.0% | |
| CAAACTCACTGCTCATTCTG+TGG | - | chr7_2:60189558-60189577 | Msa1066220:intron | 45.0% | |
| ! | TGTGAATTTTGTGTCGCGGA+TGG | - | chr7_2:60189618-60189637 | Msa1066220:intron | 45.0% |
| !! | ATGATGGACCTCAGATCTCA+TGG | - | chr7_2:60190143-60190162 | Msa1066220:intron | 45.0% |
| ! | TGATGGACCTCAGATCTCAT+GGG | - | chr7_2:60190144-60190163 | Msa1066220:intron | 45.0% |
| CTCATGGGAAAGACCGAATA+TGG | - | chr7_2:60190159-60190178 | Msa1066220:intron | 45.0% | |
| AAGACCGAATATGGACCTTC+TGG | - | chr7_2:60190168-60190187 | Msa1066220:intron | 45.0% | |
| ACTGGGATCCGTCATACATT+CGG | - | chr7_2:60190215-60190234 | Msa1066220:intron | 45.0% | |
| TGTCAAGTGGAAACGTGCAA+TGG | - | chr7_2:60190375-60190394 | Msa1066220:intron | 45.0% | |
| GTCAAGTGGAAACGTGCAAT+GGG | - | chr7_2:60190376-60190395 | Msa1066220:intron | 45.0% | |
| CCCCAGATTTGTGAAGAAGA+TGG | - | chr7_2:60190502-60190521 | Msa1066220:intron | 45.0% | |
| ! | CGGAACCTTTTCACTTCTTC+TGG | + | chr7_2:60190580-60190599 | None:intergenic | 45.0% |
| !!! | AGCTGGACACCTTTTGAGTT+TGG | + | chr7_2:60190923-60190942 | None:intergenic | 45.0% |
| ! | GTCTTGGCTGTCAGTTTTCT+TGG | + | chr7_2:60191017-60191036 | None:intergenic | 45.0% |
| AAAACTGACAGCCAAGACAG+TGG | - | chr7_2:60191019-60191038 | Msa1066220:CDS | 45.0% | |
| GGACTTGACGATTTCCTCTT+TGG | + | chr7_2:60191055-60191074 | None:intergenic | 45.0% | |
| GAGGTGAGGTTTCTTGACAG+GGG | + | chr7_2:60186672-60186691 | None:intergenic | 50.0% | |
| CTGAGGTGAGGTTTCTTGAC+AGG | + | chr7_2:60186674-60186693 | None:intergenic | 50.0% | |
| GTGTGTAGTTCAGCCGCAAT+TGG | - | chr7_2:60186909-60186928 | Msa1066220:intron | 50.0% | |
| GTGTAGTTCAGCCGCAATTG+GGG | - | chr7_2:60186911-60186930 | Msa1066220:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7_2:60187407-60187426 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7_2:60187404-60187423 | Msa1066220:CDS | 50.0% |
| GTCCCATCAACAACGAACAC+CGG | + | chr7_2:60187760-60187779 | None:intergenic | 50.0% | |
| !!! | GCCTTTGTTTTCAACGGCGA+TGG | + | chr7_2:60187784-60187803 | None:intergenic | 50.0% |
| TCGACTCAATTCCGGAAGAC+CGG | + | chr7_2:60187825-60187844 | None:intergenic | 50.0% | |
| GCTGAAACACCTTCAGCAAC+CGG | + | chr7_2:60187856-60187875 | None:intergenic | 50.0% | |
| !! | GTTGCTGAAGGTGTTTCAGC+TGG | - | chr7_2:60187856-60187875 | Msa1066220:intron | 50.0% |
| GGCAAGATGAAGGCTCACAA+TGG | + | chr7_2:60188752-60188771 | None:intergenic | 50.0% | |
| AACGGTTCCTGCATGCAGAA+AGG | + | chr7_2:60188981-60189000 | None:intergenic | 50.0% | |
| AAGCTGGGCTTGGATTGAAG+AGG | - | chr7_2:60189027-60189046 | Msa1066220:intron | 50.0% | |
| GGTCTTTCCCATGAGATCTG+AGG | + | chr7_2:60190154-60190173 | None:intergenic | 50.0% | |
| !! | ATGACGGATCCCAGTTCTGA+TGG | + | chr7_2:60190210-60190229 | None:intergenic | 50.0% |
| AGAAGTGAAAAGGTTCCGGC+AGG | - | chr7_2:60190582-60190601 | Msa1066220:intron | 50.0% | |
| !! | GTTTTGAGCCTCCACTGTCT+TGG | + | chr7_2:60191033-60191052 | None:intergenic | 50.0% |
| GTGGAGGCTCAAAACCAAAG+AGG | - | chr7_2:60191038-60191057 | Msa1066220:CDS | 50.0% | |
| ! | AGGCGACGCCTAACAGATTT+TGG | + | chr7_2:60191085-60191104 | None:intergenic | 50.0% |
| CACACTGAACTAACTGCCCT+TGG | + | chr7_2:60191250-60191269 | Msa1066230:intron | 50.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr7_2:60187412-60187431 | None:intergenic | 55.0% | |
| TGTAGGCGACCCCACTTAGT+GGG | + | chr7_2:60187418-60187437 | None:intergenic | 55.0% | |
| ATGTAGGCGACCCCACTTAG+TGG | + | chr7_2:60187419-60187438 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGCCTACA+TGG | - | chr7_2:60187418-60187437 | Msa1066220:CDS | 55.0% | |
| CGCCGTTGAAAACAAAGGCC+AGG | - | chr7_2:60187785-60187804 | Msa1066220:CDS | 55.0% | |
| ! | ACTAGCTTGCCGGTTGCTGA+AGG | - | chr7_2:60187844-60187863 | Msa1066220:intron | 55.0% |
| !! | CTGAAGGTGTTTCAGCTGGG+AGG | - | chr7_2:60187860-60187879 | Msa1066220:intron | 55.0% |
| CTGCTCATTCTGTGGGCATC+CGG | - | chr7_2:60189566-60189585 | Msa1066220:intron | 55.0% | |
| TGCTCATTCTGTGGGCATCC+GGG | - | chr7_2:60189567-60189586 | Msa1066220:intron | 55.0% | |
| TGTGTCGCGGATGGCAATGA+AGG | - | chr7_2:60189627-60189646 | Msa1066220:intron | 55.0% | |
| GGGATCCGTCATACATTCGG+CGG | - | chr7_2:60190218-60190237 | Msa1066220:intron | 55.0% | |
| GAAAAGGTTCCGGCAGGAAC+AGG | - | chr7_2:60190588-60190607 | Msa1066220:intron | 55.0% | |
| ACTGACAGCCAAGACAGTGG+AGG | - | chr7_2:60191022-60191041 | Msa1066220:CDS | 55.0% | |
| CTGGGAAAGCAGCCCCAACA+AGG | + | chr7_2:60190561-60190580 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 60186379 | 60191361 | 60186379 | ID=Msa1066220;Name=Msa1066220 |
| chr7_2 | mRNA | 60186379 | 60191361 | 60186379 | ID=Msa1066220-mRNA-1;Parent=Msa1066220;Name=Msa1066220-mRNA-1;_AED=0.04;_eAED=0.04;_QI=157|1|1|1|1|1|8|244|612 |
| chr7_2 | exon | 60186379 | 60186892 | 60186379 | ID=Msa1066220-mRNA-1:exon:11790;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60187131 | 60187600 | 60187131 | ID=Msa1066220-mRNA-1:exon:11789;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60187727 | 60187862 | 60187727 | ID=Msa1066220-mRNA-1:exon:11788;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60188039 | 60188279 | 60188039 | ID=Msa1066220-mRNA-1:exon:11787;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60188566 | 60188747 | 60188566 | ID=Msa1066220-mRNA-1:exon:11786;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60189394 | 60189564 | 60189394 | ID=Msa1066220-mRNA-1:exon:11785;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60189822 | 60189995 | 60189822 | ID=Msa1066220-mRNA-1:exon:11784;Parent=Msa1066220-mRNA-1 |
| chr7_2 | exon | 60191010 | 60191361 | 60191010 | ID=Msa1066220-mRNA-1:exon:11783;Parent=Msa1066220-mRNA-1 |
| chr7_2 | five_prime_UTR | 60191205 | 60191361 | 60191205 | ID=Msa1066220-mRNA-1:five_prime_utr;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60191010 | 60191204 | 60191010 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60189822 | 60189995 | 60189822 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60189394 | 60189564 | 60189394 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60188566 | 60188747 | 60188566 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60188039 | 60188279 | 60188039 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60187727 | 60187862 | 60187727 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60187131 | 60187600 | 60187131 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | CDS | 60186623 | 60186892 | 60186623 | ID=Msa1066220-mRNA-1:cds;Parent=Msa1066220-mRNA-1 |
| chr7_2 | three_prime_UTR | 60186379 | 60186622 | 60186379 | ID=Msa1066220-mRNA-1:three_prime_utr;Parent=Msa1066220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
