AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1196440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1196440 MtrunA17_Chr8g0362151 100.000 90 0 0 1 90 50 139 9.82e-60 184
Msa1196440 MtrunA17_Chr5g0416391 92.391 92 5 2 1 90 48 139 4.45e-53 167
Msa1196440 MtrunA17_Chr6g0453021 68.627 102 19 3 1 90 58 158 9.11e-40 133
Msa1196440 MtrunA17_Chr7g0217111 70.526 95 23 2 1 90 48 142 6.85e-38 128
Msa1196440 MtrunA17_Chr4g0060031 62.376 101 35 2 3 103 73 170 3.16e-33 117
Msa1196440 MtrunA17_Chr3g0119291 61.111 90 35 0 15 104 46 135 4.72e-32 112
Msa1196440 MtrunA17_Chr6g0450991 71.053 76 22 0 24 99 63 138 2.48e-31 111
Msa1196440 MtrunA17_Chr8g0381741 75.000 64 16 0 26 89 52 115 3.37e-30 109
Msa1196440 MtrunA17_Chr5g0415941 70.833 72 21 0 28 99 87 158 1.29e-29 108
Msa1196440 MtrunA17_Chr3g0123691 64.045 89 25 2 1 89 40 121 1.75e-29 107
Msa1196440 MtrunA17_Chr8g0362751 72.059 68 19 0 28 95 89 156 3.67e-28 103
Msa1196440 MtrunA17_Chr7g0265521 52.577 97 37 1 3 90 29 125 1.45e-27 100
Msa1196440 MtrunA17_Chr1g0179581 58.621 87 34 1 16 102 18 102 2.07e-27 97.1
Msa1196440 MtrunA17_Chr8g0346251 66.102 59 20 0 35 93 48 106 3.19e-23 89.7
Msa1196440 MtrunA17_Chr3g0127511 66.667 60 20 0 30 89 40 99 5.72e-23 89.0
Msa1196440 MtrunA17_Chr5g0403701 53.846 78 36 0 28 105 53 130 2.88e-20 81.3
Msa1196440 MtrunA17_Chr5g0403691 53.846 78 36 0 28 105 53 130 4.94e-20 80.9
Msa1196440 MtrunA17_Chr4g0055851 47.561 82 40 2 10 88 99 180 2.05e-16 72.4
Msa1196440 MtrunA17_Chr4g0054421 48.718 78 37 1 14 88 110 187 5.68e-16 70.9
Msa1196440 MtrunA17_Chr5g0400781 52.174 69 33 0 20 88 115 183 1.03e-15 70.5
Msa1196440 MtrunA17_Chr4g0071411 55.000 60 27 0 31 90 91 150 2.34e-15 68.6
Msa1196440 MtrunA17_Chr5g0399491 43.678 87 48 1 3 88 110 196 5.75e-15 68.6
Msa1196440 MtrunA17_Chr2g0308611 42.857 84 48 0 5 88 177 260 1.65e-14 67.4
Msa1196440 MtrunA17_Chr7g0258831 54.098 61 28 0 28 88 160 220 2.42e-14 67.0
Msa1196440 MtrunA17_Chr1g0175651 46.154 78 42 0 11 88 137 214 4.67e-14 65.9
Msa1196440 MtrunA17_Chr8g0335131 54.098 61 28 0 28 88 146 206 5.68e-14 65.9
Msa1196440 MtrunA17_Chr1g0151971 52.459 61 29 0 28 88 130 190 3.41e-13 63.5
Msa1196440 MtrunA17_Chr3g0135331 50.820 61 30 0 28 88 145 205 1.33e-12 62.0
Msa1196440 MtrunA17_Chr2g0299031 45.679 81 40 2 10 86 60 140 2.79e-12 60.5
Msa1196440 MtrunA17_Chr4g0044091 50.794 63 31 0 28 90 65 127 4.33e-12 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1196440 AT1G69780.1 87.209 86 11 0 6 91 63 148 7.39e-49 157
Msa1196440 AT5G15150.1 81.609 87 10 2 7 91 96 178 1.39e-42 141
Msa1196440 AT3G01220.1 82.278 79 12 1 15 91 72 150 2.39e-40 135
Msa1196440 AT1G26960.1 71.579 95 27 0 11 105 54 148 3.71e-40 134
Msa1196440 AT4G40060.1 69.512 82 23 1 10 89 39 120 8.10e-33 116
Msa1196440 AT3G01470.1 76.389 72 17 0 24 95 64 135 9.61e-33 115
Msa1196440 AT5G65310.2 61.616 99 24 3 3 89 19 115 1.31e-31 112
Msa1196440 AT5G65310.1 61.616 99 24 3 3 89 37 133 1.69e-31 113
Msa1196440 AT2G22430.1 80.000 65 13 0 25 89 59 123 3.39e-31 112
Msa1196440 AT3G61890.1 65.574 61 21 0 31 91 33 93 5.30e-23 89.4
Msa1196440 AT2G46680.2 64.516 62 22 0 29 90 33 94 5.83e-23 89.7
Msa1196440 AT2G46680.1 64.516 62 22 0 29 90 33 94 6.71e-23 89.4
Msa1196440 AT5G03790.1 64.062 64 23 0 28 91 77 140 4.69e-22 87.0
Msa1196440 AT5G03790.2 64.062 64 23 0 28 91 77 140 4.90e-22 85.9
Msa1196440 AT1G27045.5 60.294 68 27 0 28 95 25 92 9.50e-22 84.7
Msa1196440 AT1G27045.3 60.294 68 27 0 28 95 25 92 9.50e-22 84.7
Msa1196440 AT1G27045.2 60.294 68 27 0 28 95 17 84 1.04e-21 84.7
Msa1196440 AT1G27045.1 60.294 68 27 0 28 95 68 135 1.61e-21 85.1
Msa1196440 AT1G27045.4 60.294 68 27 0 28 95 68 135 2.40e-21 85.5
Msa1196440 AT2G18550.1 53.247 77 36 0 28 104 61 137 3.72e-21 84.3
Msa1196440 AT4G36740.1 51.163 86 42 0 19 104 46 131 4.79e-21 84.0
Msa1196440 AT4G36740.2 51.163 86 42 0 19 104 47 132 4.93e-21 84.0
Msa1196440 AT2G36610.1 50.549 91 30 3 9 91 59 142 2.07e-20 81.6
Msa1196440 AT5G53980.1 52.632 76 32 1 23 98 6 77 8.19e-20 79.3
Msa1196440 AT5G66700.1 53.846 78 34 1 12 89 57 132 1.88e-19 80.1
Msa1196440 AT2G01430.1 51.282 78 38 0 9 86 120 197 3.70e-16 72.0
Msa1196440 AT2G01430.2 44.444 90 50 0 10 99 121 210 1.03e-15 69.7
Msa1196440 AT4G37790.1 45.455 77 42 0 12 88 110 186 9.62e-15 68.2
Msa1196440 AT4G17460.1 46.667 75 40 0 14 88 121 195 1.07e-14 68.2
Msa1196440 AT3G60390.1 47.297 74 39 0 15 88 149 222 2.38e-14 67.4
Msa1196440 AT5G47370.1 47.826 69 36 0 20 88 122 190 2.46e-14 67.0
Msa1196440 AT5G06710.1 48.611 72 37 0 17 88 179 250 4.01e-14 67.0
Msa1196440 AT2G22800.1 52.381 63 30 0 26 88 111 173 1.15e-13 65.1
Msa1196440 AT4G16780.1 46.377 69 37 0 20 88 121 189 1.94e-12 62.0
Msa1196440 AT2G44910.1 49.180 61 31 0 28 88 163 223 4.29e-12 61.2
Msa1196440 AT5G06710.4 47.619 63 33 0 17 79 179 241 1.20e-11 59.7
Msa1196440 AT1G70920.1 44.304 79 43 1 8 86 50 127 3.14e-11 57.8
Msa1196440 AT1G70920.2 44.304 79 43 1 8 86 20 97 3.20e-11 57.4

Find 23 sgRNAs with CRISPR-Local

Find 868 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCAAGACAGATTGCTATA+TGG 0.383913 8_1:-45541837 Msa1196440:CDS
TCCGATGATGGATCGCAGTT+AGG 0.391738 8_1:-45541976 Msa1196440:CDS
CCGATGATGGATCGCAGTTA+GGG 0.414857 8_1:-45541975 Msa1196440:CDS
ATGCAGCTAGCAAGGGCTCT+TGG 0.429987 8_1:-45541865 Msa1196440:CDS
CCCTAACTGCGATCCATCAT+CGG 0.502143 8_1:+45541975 None:intergenic
TGAGAACCTACACAGTGCTC+AGG 0.505896 8_1:+45532617 None:intergenic
CTATATGGTTTCAAAACAGA+AGG 0.506981 8_1:-45541822 Msa1196440:CDS
AACCATATAGCAATCTGTCT+TGG 0.526039 8_1:+45541835 None:intergenic
AGAGGAAAATGCAGCTAGCA+AGG 0.526858 8_1:-45541873 Msa1196440:CDS
GAGGAAGAATTATCCGATGA+TGG 0.563562 8_1:-45541988 Msa1196440:CDS
GGTTTCAAAACAGAAGGGCT+AGG 0.568856 8_1:-45541816 Msa1196440:CDS
GTAGACCCTGAGCACTGTGT+AGG 0.582116 8_1:-45532623 Msa1196440:CDS
GAAGAAGAGAAGGCTTAACA+TGG 0.612268 8_1:-45541950 Msa1196440:CDS
AGTTAGGGGAGAAGAAGAGA+AGG 0.616244 8_1:-45541960 Msa1196440:CDS
GAGAACCTACACAGTGCTCA+GGG 0.621064 8_1:+45532618 None:intergenic
TAGGTGGAAGACAAAACAGT+TGG 0.622940 8_1:-45541797 Msa1196440:CDS
TATATGGTTTCAAAACAGAA+GGG 0.626685 8_1:-45541821 Msa1196440:CDS
CAGTGCTCAGGGTCTACAGA+AGG 0.627831 8_1:+45532629 None:intergenic
GAGGAAAATGCAGCTAGCAA+GGG 0.631443 8_1:-45541872 Msa1196440:CDS
CGATGATGGATCGCAGTTAG+GGG 0.649440 8_1:-45541974 Msa1196440:CDS
GAAACAAGCTTGAACCTGAG+AGG 0.652955 8_1:-45541891 Msa1196440:CDS
TGGAGAAGAAGCTAATGTCG+AGG 0.659865 8_1:-45542007 Msa1196440:CDS
TTCAAAACAGAAGGGCTAGG+TGG 0.663747 8_1:-45541813 Msa1196440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTGAAAAATTTAAAGAA+TGG - chr8_1:45534422-45534441 Msa1196440:intron 15.0%
!!! TACTCTAATTTGAAAATTTT+TGG - chr8_1:45534781-45534800 Msa1196440:intron 15.0%
!! ATCAAAATTTATTATAAGCA+GGG - chr8_1:45534924-45534943 Msa1196440:intron 15.0%
!! CAAAAATTTACATCATATAT+GGG + chr8_1:45537680-45537699 None:intergenic 15.0%
!! TCAAAAATTTACATCATATA+TGG + chr8_1:45537681-45537700 None:intergenic 15.0%
!!! ATTTTCATAAAAATTCACAA+CGG + chr8_1:45538884-45538903 None:intergenic 15.0%
!! TTTATTAGATTTCTTTGATT+AGG + chr8_1:45541763-45541782 None:intergenic 15.0%
!! AAGACAATATGATACTATTA+AGG - chr8_1:45532891-45532910 Msa1196440:intron 20.0%
!!! CAATAAGATTATTGATGATT+TGG - chr8_1:45533240-45533259 Msa1196440:intron 20.0%
!! ATTAAATTTCTCTTAAGTTC+AGG + chr8_1:45533916-45533935 None:intergenic 20.0%
!! ACATGGTTTATATATTTAGA+TGG - chr8_1:45534037-45534056 Msa1196440:intron 20.0%
!!! TTATTGATGATTTTTCTAGA+AGG - chr8_1:45534365-45534384 Msa1196440:intron 20.0%
!!! TATTGATGATTTTTCTAGAA+GGG - chr8_1:45534366-45534385 Msa1196440:intron 20.0%
!! GATCAAAATTTATTATAAGC+AGG - chr8_1:45534923-45534942 Msa1196440:intron 20.0%
!! TAAGAATATCATCTACATAA+AGG + chr8_1:45535823-45535842 None:intergenic 20.0%
!! TTATGTAGATGATATTCTTA+TGG - chr8_1:45535823-45535842 Msa1196440:intron 20.0%
!!! TAAAAAAAACGGTTTTTTCA+TGG - chr8_1:45537041-45537060 Msa1196440:intron 20.0%
!!! AAAAAAAACGGTTTTTTCAT+GGG - chr8_1:45537042-45537061 Msa1196440:intron 20.0%
!! TACAAGGTTTATATTTATAG+TGG + chr8_1:45537105-45537124 None:intergenic 20.0%
!! AAATAAACAACAAGAGATAA+AGG + chr8_1:45537458-45537477 None:intergenic 20.0%
!!! ATGATGTAAATTTTTGACTA+TGG - chr8_1:45537684-45537703 Msa1196440:intron 20.0%
!! AGGTATTAAAAATTGTCAAT+TGG + chr8_1:45537740-45537759 None:intergenic 20.0%
!! GATTGTTAATTATGAATATG+TGG - chr8_1:45538004-45538023 Msa1196440:intron 20.0%
!!! TTAATTGATAATGCAATATG+TGG - chr8_1:45538096-45538115 Msa1196440:intron 20.0%
!! TGAAATATGATATATTCATG+TGG - chr8_1:45538442-45538461 Msa1196440:intron 20.0%
!!! TCTTTTACTCACATTAAATT+AGG - chr8_1:45538689-45538708 Msa1196440:intron 20.0%
!!! TATGTTTATTGACTTATTTG+TGG - chr8_1:45538735-45538754 Msa1196440:intron 20.0%
!!! GATTTATTACTCATGTATTT+TGG - chr8_1:45538814-45538833 Msa1196440:intron 20.0%
!! TTCTCTTTGTAGTTAATTTA+TGG - chr8_1:45539870-45539889 Msa1196440:intron 20.0%
! TATATGGTTTCAAAACAGAA+GGG - chr8_1:45532822-45532841 Msa1196440:intron 25.0%
! ATATCTATAAGCATGTTTGA+TGG - chr8_1:45533934-45533953 Msa1196440:intron 25.0%
! ACACTTATAGAAAATCAGAT+TGG - chr8_1:45534448-45534467 Msa1196440:intron 25.0%
!!! ATAATAAATTTTGATCCTCC+AGG + chr8_1:45534919-45534938 None:intergenic 25.0%
! ATTCATTACCTAAGAATCAA+AGG - chr8_1:45535342-45535361 Msa1196440:intron 25.0%
! TTCATTACCTAAGAATCAAA+GGG - chr8_1:45535343-45535362 Msa1196440:intron 25.0%
!! TTACAATGAAATCTTTTCAC+CGG - chr8_1:45535478-45535497 Msa1196440:intron 25.0%
! TGGTAAAACATTGTTCTATA+AGG - chr8_1:45535501-45535520 Msa1196440:intron 25.0%
! GGTAAAACATTGTTCTATAA+GGG - chr8_1:45535502-45535521 Msa1196440:intron 25.0%
! TTGTTGAAGAAATCTTTGTA+TGG - chr8_1:45535665-45535684 Msa1196440:intron 25.0%
! TGTTGAAGAAATCTTTGTAT+GGG - chr8_1:45535666-45535685 Msa1196440:intron 25.0%
! AGAAACTCATATCATTATAG+TGG - chr8_1:45537350-45537369 Msa1196440:intron 25.0%
! TAATATTTGTTCAAGTGTAC+AGG + chr8_1:45537711-45537730 None:intergenic 25.0%
!!! TAAGAGTTTTGATGATAACA+AGG + chr8_1:45537760-45537779 None:intergenic 25.0%
! TGTTATCATCAAAACTCTTA+AGG - chr8_1:45537760-45537779 Msa1196440:intron 25.0%
! CATGATAACATGATGAAATA+AGG - chr8_1:45537849-45537868 Msa1196440:intron 25.0%
! ATTAAACATCCAACAATCAT+TGG + chr8_1:45537880-45537899 None:intergenic 25.0%
! ATGATTGTTGGATGTTTAAT+AGG - chr8_1:45537880-45537899 Msa1196440:intron 25.0%
! ATTAATAAATGCTTGATGTG+TGG - chr8_1:45538068-45538087 Msa1196440:intron 25.0%
!! GGAGAATATTTAGAGTAAAT+TGG - chr8_1:45538127-45538146 Msa1196440:intron 25.0%
! TGATATTTGATTATGTGACT+TGG - chr8_1:45538337-45538356 Msa1196440:intron 25.0%
! GATTTGTGAACTTGTATATA+TGG - chr8_1:45538403-45538422 Msa1196440:intron 25.0%
! TGCTCAATTATGTTTATTTG+TGG - chr8_1:45538528-45538547 Msa1196440:intron 25.0%
! TTAATGTGAGTAAAAGAGAA+AGG + chr8_1:45538686-45538705 None:intergenic 25.0%
!! ATTAAATTAGGCTCTGATTA+GGG - chr8_1:45538701-45538720 Msa1196440:intron 25.0%
!! TATGGTTATGTATTTGAAGT+TGG - chr8_1:45538778-45538797 Msa1196440:intron 25.0%
!! ATGGTTATGTATTTGAAGTT+GGG - chr8_1:45538779-45538798 Msa1196440:intron 25.0%
!!! TTATTACTCATGTATTTTGG+AGG - chr8_1:45538817-45538836 Msa1196440:intron 25.0%
! ACGAATATATGTATTTGTTC+TGG + chr8_1:45541622-45541641 None:intergenic 25.0%
! AGAAATTAGACGTTAATCAA+TGG - chr8_1:45541803-45541822 Msa1196440:CDS 25.0%
! AAAAATGAACCTGAAATCAT+GGG - chr8_1:45541948-45541967 Msa1196440:CDS 25.0%
CTATATGGTTTCAAAACAGA+AGG - chr8_1:45532821-45532840 Msa1196440:intron 30.0%
AGTATCCTTGAAATTCTCAA+AGG + chr8_1:45533332-45533351 None:intergenic 30.0%
TTCAAGGATACTATGCTTTA+TGG - chr8_1:45533340-45533359 Msa1196440:intron 30.0%
! TGTTTTCTTTGTCACAACTA+TGG - chr8_1:45533568-45533587 Msa1196440:intron 30.0%
!! AAAGGAGTACTTTGAAACTT+TGG - chr8_1:45533765-45533784 Msa1196440:intron 30.0%
AATAAGGCTTGCAAAATTCA+AGG - chr8_1:45533823-45533842 Msa1196440:intron 30.0%
TATTGTACTAGAATTGAACG+TGG - chr8_1:45533964-45533983 Msa1196440:intron 30.0%
GTGCATTAGTTATAGCTAAA+GGG - chr8_1:45534007-45534026 Msa1196440:intron 30.0%
TTAGATGGTTCCACTATTAT+AGG - chr8_1:45534052-45534071 Msa1196440:intron 30.0%
TTCTGTGATAATTGCACATT+AGG - chr8_1:45534214-45534233 Msa1196440:intron 30.0%
!! ATGATTTTTCTAGAAGGGTA+TGG - chr8_1:45534371-45534390 Msa1196440:intron 30.0%
!! TGATTTTTCTAGAAGGGTAT+GGG - chr8_1:45534372-45534391 Msa1196440:intron 30.0%
! TACTTTTGATGAGACTCATA+TGG - chr8_1:45534951-45534970 Msa1196440:intron 30.0%
! ACTTTTGATGAGACTCATAT+GGG - chr8_1:45534952-45534971 Msa1196440:intron 30.0%
ATTAATCCACCTGTTAGATA+CGG - chr8_1:45535155-45535174 Msa1196440:intron 30.0%
CATTCAAAGCATAACAAATG+AGG + chr8_1:45535190-45535209 None:intergenic 30.0%
! ATAGAACAATGTTTTACCAC+CGG + chr8_1:45535500-45535519 None:intergenic 30.0%
!! TTGTTCTATAAGGGTACTTA+TGG - chr8_1:45535511-45535530 Msa1196440:intron 30.0%
TGATCTTGAGTTAGAACAAA+TGG - chr8_1:45535550-45535569 Msa1196440:intron 30.0%
ATAGTTGTGTTTACATGATG+AGG - chr8_1:45535768-45535787 Msa1196440:intron 30.0%
TATCATCTACATAAAGGAGA+AGG + chr8_1:45535817-45535836 None:intergenic 30.0%
! GAATTTGAGATGAAGAATCT+TGG - chr8_1:45535896-45535915 Msa1196440:intron 30.0%
TACTTGGTATGGATATCATA+AGG - chr8_1:45535933-45535952 Msa1196440:intron 30.0%
ACTTGGTATGGATATCATAA+GGG - chr8_1:45535934-45535953 Msa1196440:intron 30.0%
GTTCAGAATGAGATATTCTA+AGG - chr8_1:45536018-45536037 Msa1196440:intron 30.0%
ACTTATCACACTTATTGCAT+AGG + chr8_1:45536192-45536211 None:intergenic 30.0%
ATGCAATAAGTGTGATAAGT+CGG - chr8_1:45536192-45536211 Msa1196440:intron 30.0%
TATTTGAATGGGACTTTGAA+AGG - chr8_1:45536269-45536288 Msa1196440:intron 30.0%
GACACTAGAAAATCTTTATC+AGG - chr8_1:45536371-45536390 Msa1196440:intron 30.0%
!! GGTTTTGTGTTTACTTTGTT+CGG - chr8_1:45536392-45536411 Msa1196440:intron 30.0%
AATCATACCTTTCAACCATA+TGG + chr8_1:45536513-45536532 None:intergenic 30.0%
! ATATGGTTGAAAGGTATGAT+TGG - chr8_1:45536512-45536531 Msa1196440:intron 30.0%
! AAAGGTATGATTGGAGAAAT+GGG - chr8_1:45536521-45536540 Msa1196440:intron 30.0%
TATTCATTTGGCAAATCATC+AGG - chr8_1:45536589-45536608 Msa1196440:intron 30.0%
! AAGGTGATTGATGGTTAAAT+TGG - chr8_1:45536818-45536837 Msa1196440:intron 30.0%
TTCAGAATTAGCTCAAAATC+GGG + chr8_1:45536950-45536969 None:intergenic 30.0%
CTTCAGAATTAGCTCAAAAT+CGG + chr8_1:45536951-45536970 None:intergenic 30.0%
GCTGCAGAAGTTAAAAAAAA+CGG - chr8_1:45537030-45537049 Msa1196440:intron 30.0%
TTATGTGGTGTAGAAAAACA+AGG - chr8_1:45537133-45537152 Msa1196440:intron 30.0%
!! ATAAACCCTAGTTTGTTTGT+TGG + chr8_1:45537167-45537186 None:intergenic 30.0%
GGTTTATAGAGAAATTCTCT+TGG - chr8_1:45537180-45537199 Msa1196440:intron 30.0%
! CTCATATCATTATAGTGGAA+CGG - chr8_1:45537355-45537374 Msa1196440:intron 30.0%
!!! CATCAGTTTTATTATTGGTG+TGG - chr8_1:45537542-45537561 Msa1196440:intron 30.0%
GAGCTTAGAAATCAACAAAA+AGG + chr8_1:45537640-45537659 None:intergenic 30.0%
TTGTTCGATCATAAAACTGT+TGG + chr8_1:45537809-45537828 None:intergenic 30.0%
TTGTTGGATGTTTAATAGGT+TGG - chr8_1:45537884-45537903 Msa1196440:intron 30.0%
!!! GAAGCAATGTTTTTTCTTTG+TGG - chr8_1:45537956-45537975 Msa1196440:intron 30.0%
ATATAGGACTTATGAATGCA+TGG + chr8_1:45538184-45538203 None:intergenic 30.0%
ATCTACATATCTCCACATAT+AGG + chr8_1:45538200-45538219 None:intergenic 30.0%
ATATATGCAGAGATATGTAG+AGG - chr8_1:45538218-45538237 Msa1196440:intron 30.0%
TATATGCAGAGATATGTAGA+GGG - chr8_1:45538219-45538238 Msa1196440:intron 30.0%
AAATTACTTCCAACATCCAA+TGG - chr8_1:45538253-45538272 Msa1196440:intron 30.0%
TTGATGAATGTTGATACATG+TGG - chr8_1:45538381-45538400 Msa1196440:intron 30.0%
TAATTGAGCAAAATCATGCA+AGG + chr8_1:45538518-45538537 None:intergenic 30.0%
! CATTAAATTAGGCTCTGATT+AGG - chr8_1:45538700-45538719 Msa1196440:intron 30.0%
TTTGTGGTTGAACTTATTTG+TGG - chr8_1:45538751-45538770 Msa1196440:intron 30.0%
GAACTTATTTGTGGAGATTA+TGG - chr8_1:45538760-45538779 Msa1196440:intron 30.0%
AGGATTATTACATGTTGATG+AGG - chr8_1:45538837-45538856 Msa1196440:intron 30.0%
TTTGCAAGATATATTGCCTT+CGG - chr8_1:45538945-45538964 Msa1196440:intron 30.0%
CACCTAAAGATGAAATATCA+CGG + chr8_1:45539185-45539204 None:intergenic 30.0%
!! TGAACGTTATTTTCGATGAA+GGG + chr8_1:45539322-45539341 None:intergenic 30.0%
ACGATAGAACAAAATTGCAA+GGG + chr8_1:45539385-45539404 None:intergenic 30.0%
TACGATAGAACAAAATTGCA+AGG + chr8_1:45539386-45539405 None:intergenic 30.0%
! TGCAATTTTGTTCTATCGTA+CGG - chr8_1:45539386-45539405 Msa1196440:intron 30.0%
!! GTTTTAAATCCTCCTTCTTT+AGG - chr8_1:45539408-45539427 Msa1196440:intron 30.0%
AAAAGATGAGAAGCAAAAGA+GGG + chr8_1:45539516-45539535 None:intergenic 30.0%
! TCTTTTGCTTCTCATCTTTT+CGG - chr8_1:45539516-45539535 Msa1196440:intron 30.0%
AATCGAAGAACTGATCTAAA+GGG + chr8_1:45539573-45539592 None:intergenic 30.0%
AATGACAACGAAAAGACTAA+AGG + chr8_1:45539786-45539805 None:intergenic 30.0%
GAATCAAGAAAAGATTCTGA+CGG + chr8_1:45540678-45540697 None:intergenic 30.0%
AATGTTAGATCAAGTTCACA+AGG - chr8_1:45540726-45540745 Msa1196440:intron 30.0%
TAATGGAACTGAGAAATAGT+GGG - chr8_1:45541335-45541354 Msa1196440:intron 30.0%
AAAAGTGAGTCATACCTTAA+GGG - chr8_1:45541371-45541390 Msa1196440:intron 30.0%
ATGCAAGTTAACCCTTATAT+AGG - chr8_1:45541396-45541415 Msa1196440:intron 30.0%
ATCAATCACATGTTAACATG+TGG + chr8_1:45541587-45541606 None:intergenic 30.0%
CATGTGATTGATATTCTAAC+CGG - chr8_1:45541595-45541614 Msa1196440:intron 30.0%
! TATATGTATTTGTTCTGGAC+CGG + chr8_1:45541617-45541636 None:intergenic 30.0%
CATGGTTCAAATAACTTAGA+AGG - chr8_1:45541724-45541743 Msa1196440:intron 30.0%
! TTTGTGTATTTTTCCACTCT+TGG - chr8_1:45541901-45541920 Msa1196440:CDS 30.0%
! TTGTGTATTTTTCCACTCTT+GGG - chr8_1:45541902-45541921 Msa1196440:CDS 30.0%
GAAAAATGAACCTGAAATCA+TGG - chr8_1:45541947-45541966 Msa1196440:CDS 30.0%
!! TCATTTTCAGGGATAGAACT+TGG - chr8_1:45532616-45532635 Msa1196440:CDS 35.0%
!!! CTTGAGAAGAGTTTTGAGTT+AGG - chr8_1:45532730-45532749 Msa1196440:intron 35.0%
AACCAAGACAGATTGCTATA+TGG - chr8_1:45532806-45532825 Msa1196440:intron 35.0%
AACCATATAGCAATCTGTCT+TGG + chr8_1:45532811-45532830 None:intergenic 35.0%
!! ACAACTCTACTTTTACCGAA+TGG - chr8_1:45533180-45533199 Msa1196440:intron 35.0%
AGATGTAAATCTGGAAGATG+AGG - chr8_1:45533270-45533289 Msa1196440:intron 35.0%
TTGAAATTCTCAAAGGACCT+AGG + chr8_1:45533325-45533344 None:intergenic 35.0%
! TAGGTCCTTTGAGAATTTCA+AGG - chr8_1:45533324-45533343 Msa1196440:intron 35.0%
TACTATGCTTTATGGCAAAG+AGG - chr8_1:45533348-45533367 Msa1196440:intron 35.0%
ACTATGCTTTATGGCAAAGA+GGG - chr8_1:45533349-45533368 Msa1196440:intron 35.0%
TTTGAACTTGGTCAACTCTT+TGG + chr8_1:45533413-45533432 None:intergenic 35.0%
AACCTTCAACTCTTTGAACT+TGG + chr8_1:45533425-45533444 None:intergenic 35.0%
AGAAGTGAAAACAGAGGAAA+GGG - chr8_1:45533481-45533500 Msa1196440:intron 35.0%
!! GTTTTATTATCACCACCCTT+TGG + chr8_1:45533538-45533557 None:intergenic 35.0%
! GTTTCAAAGTACTCCTTTCT+CGG + chr8_1:45533763-45533782 None:intergenic 35.0%
GCTTGCAAAATTCAAGGTAT+GGG - chr8_1:45533829-45533848 Msa1196440:intron 35.0%
!! GGTCATCAAACATTTTGAGA+CGG + chr8_1:45533861-45533880 None:intergenic 35.0%
CATCCTTCAAAAGGAAATCA+CGG + chr8_1:45533882-45533901 None:intergenic 35.0%
!! ATTTCCTTTTGAAGGATGTG+AGG - chr8_1:45533884-45533903 Msa1196440:intron 35.0%
TATACCTCACATCCTTCAAA+AGG + chr8_1:45533891-45533910 None:intergenic 35.0%
! ATAAGCATGTTTGATGGTCT+AGG - chr8_1:45533940-45533959 Msa1196440:intron 35.0%
GGTATGATGAGAATTTCTCA+TGG - chr8_1:45533985-45534004 Msa1196440:intron 35.0%
GGTGCATTAGTTATAGCTAA+AGG - chr8_1:45534006-45534025 Msa1196440:intron 35.0%
AGCTAAAGGGTCAAAATACA+TGG - chr8_1:45534020-45534039 Msa1196440:intron 35.0%
CACTATTATAGGTCATGCAT+CGG - chr8_1:45534063-45534082 Msa1196440:intron 35.0%
TAACTAAACTGTGGCATTTG+AGG - chr8_1:45534110-45534129 Msa1196440:intron 35.0%
TTAGTTGAGCTAGCTAAACA+AGG - chr8_1:45534157-45534176 Msa1196440:intron 35.0%
!! TAGCTAAACAAGGTTTGCTA+GGG - chr8_1:45534167-45534186 Msa1196440:intron 35.0%
AAACAACACAAGGTGAAGTT+TGG - chr8_1:45534238-45534257 Msa1196440:intron 35.0%
AACAACACAAGGTGAAGTTT+GGG - chr8_1:45534239-45534258 Msa1196440:intron 35.0%
!! GCCTTTTGAGTATGTTCATT+CGG - chr8_1:45534285-45534304 Msa1196440:intron 35.0%
TCCGAATGAACATACTCAAA+AGG + chr8_1:45534289-45534308 None:intergenic 35.0%
AGTATGTTCATTCGGATCTT+TGG - chr8_1:45534293-45534312 Msa1196440:intron 35.0%
GTATGTTCATTCGGATCTTT+GGG - chr8_1:45534294-45534313 Msa1196440:intron 35.0%
TATGTTCATTCGGATCTTTG+GGG - chr8_1:45534295-45534314 Msa1196440:intron 35.0%
CAGCATCAGTTAAAACTCAT+GGG - chr8_1:45534320-45534339 Msa1196440:intron 35.0%
AGCATCAGTTAAAACTCATG+GGG - chr8_1:45534321-45534340 Msa1196440:intron 35.0%
!! AAAGTGTTGAGAACTGACAA+TGG - chr8_1:45534481-45534500 Msa1196440:intron 35.0%
! AGCAGTTTAATGAGTTTTGC+AGG - chr8_1:45534521-45534540 Msa1196440:intron 35.0%
ATTAACAGATGTCCATCAAC+AGG - chr8_1:45534709-45534728 Msa1196440:intron 35.0%
TTAACAGATGTCCATCAACA+GGG - chr8_1:45534710-45534729 Msa1196440:intron 35.0%
TTAAGATCTATCCCTGTTGA+TGG + chr8_1:45534724-45534743 None:intergenic 35.0%
GATAGATCTTAAGACACCTA+TGG - chr8_1:45534732-45534751 Msa1196440:intron 35.0%
TTCAAATTAGAGTAGTCTGC+CGG + chr8_1:45534775-45534794 None:intergenic 35.0%
! AGCTGTGAAGTGTATTTTCA+TGG - chr8_1:45534849-45534868 Msa1196440:intron 35.0%
! GCTGTGAAGTGTATTTTCAT+GGG - chr8_1:45534850-45534869 Msa1196440:intron 35.0%
!! ATTTTCATGGGTTATCCTGA+AGG - chr8_1:45534862-45534881 Msa1196440:intron 35.0%
! CTTTTGATGAGACTCATATG+GGG - chr8_1:45534953-45534972 Msa1196440:intron 35.0%
GGTAGAGAAAATTCAGTTTG+AGG - chr8_1:45535014-45535033 Msa1196440:intron 35.0%
AGAGAAAATTCAGTTTGAGG+TGG - chr8_1:45535017-45535036 Msa1196440:intron 35.0%
! AGTCAGGATCAATTGTTTCT+TGG + chr8_1:45535103-45535122 None:intergenic 35.0%
ATTAGAAAGCAACGAAAGCA+AGG - chr8_1:45535256-45535275 Msa1196440:intron 35.0%
GAATGAGGAAATGCTTTCAT+TGG - chr8_1:45535295-45535314 Msa1196440:intron 35.0%
ATGAATCAAGTTTCCAAGTC+TGG + chr8_1:45535328-45535347 None:intergenic 35.0%
TGGGTGTTTAAGAAGAAAGA+AGG - chr8_1:45535380-45535399 Msa1196440:intron 35.0%
! AAGAAGAAAGAAGGTATACC+AGG - chr8_1:45535389-45535408 Msa1196440:intron 35.0%
! AGAAGAAAGAAGGTATACCA+GGG - chr8_1:45535390-45535409 Msa1196440:intron 35.0%
ATCTATATGCAACAACCAGA+AGG - chr8_1:45535614-45535633 Msa1196440:intron 35.0%
GTTTGATGAGTTCCTAGTAA+AGG - chr8_1:45535721-45535740 Msa1196440:intron 35.0%
!! AGAATCTTGGTAATGCAAAG+AGG - chr8_1:45535909-45535928 Msa1196440:intron 35.0%
! AGAACAACTCACCTTTGTTT+CGG + chr8_1:45535961-45535980 None:intergenic 35.0%
!! ATGAGATATTCTAAGGTCGT+TGG - chr8_1:45536025-45536044 Msa1196440:intron 35.0%
CCATCTTACTTTCTCTTCAT+CGG + chr8_1:45536100-45536119 None:intergenic 35.0%
ATGAAGAGAAAGTAAGATGG+AGG - chr8_1:45536100-45536119 Msa1196440:intron 35.0%
TGAAGAGAAAGTAAGATGGA+GGG - chr8_1:45536101-45536120 Msa1196440:intron 35.0%
CTTATTGCATAGGATAAGTC+CGG + chr8_1:45536182-45536201 None:intergenic 35.0%
! AAGTGTGATAAGTCGGTTTA+TGG - chr8_1:45536199-45536218 Msa1196440:intron 35.0%
!! TGGGTTCTGAGATATTTGAA+TGG - chr8_1:45536257-45536276 Msa1196440:intron 35.0%
!! GGGTTCTGAGATATTTGAAT+GGG - chr8_1:45536258-45536277 Msa1196440:intron 35.0%
! GAAAGGTATGATTGGAGAAA+TGG - chr8_1:45536520-45536539 Msa1196440:intron 35.0%
AAGGTATGATTGGAGAAATG+GGG - chr8_1:45536522-45536541 Msa1196440:intron 35.0%
! TAGCCAAAGTGCTATTCATT+TGG - chr8_1:45536577-45536596 Msa1196440:intron 35.0%
TTGCCAAATGAATAGCACTT+TGG + chr8_1:45536583-45536602 None:intergenic 35.0%
TAGAGACATGATTGAGACAA+AGG - chr8_1:45536658-45536677 Msa1196440:intron 35.0%
CTTCATTGAAGCATAGATGA+AGG - chr8_1:45536781-45536800 Msa1196440:intron 35.0%
ATTGAAGCATAGATGAAGGT+TGG - chr8_1:45536785-45536804 Msa1196440:intron 35.0%
! AATTGGCATCATCACCATTT+TGG - chr8_1:45536835-45536854 Msa1196440:intron 35.0%
! CGATTTTGAGCTAATTCTGA+AGG - chr8_1:45536949-45536968 Msa1196440:intron 35.0%
GCCTGTGATACTGTAAAAAT+CGG - chr8_1:45536971-45536990 Msa1196440:intron 35.0%
!!! TGTTCCGTTTGGTTTTTTGA+GGG - chr8_1:45537072-45537091 Msa1196440:intron 35.0%
CCACATAATCATCTGATACA+AGG + chr8_1:45537121-45537140 None:intergenic 35.0%
CCTTGTATCAGATGATTATG+TGG - chr8_1:45537118-45537137 Msa1196440:intron 35.0%
TAGAAGCCAACAAACAAACT+AGG - chr8_1:45537158-45537177 Msa1196440:intron 35.0%
AGAAGCCAACAAACAAACTA+GGG - chr8_1:45537159-45537178 Msa1196440:intron 35.0%
! ACCTTGAACAAAGCACTATT+AGG - chr8_1:45537236-45537255 Msa1196440:intron 35.0%
! TCCTAATAGTGCTTTGTTCA+AGG + chr8_1:45537240-45537259 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG - chr8_1:45537250-45537269 Msa1196440:intron 35.0%
AAGAATCTGTTTACCCAGTT+CGG + chr8_1:45537418-45537437 None:intergenic 35.0%
TACCAAGCAATCAATTGAAG+CGG + chr8_1:45537507-45537526 None:intergenic 35.0%
CCAATAATAAAACTGATGCG+TGG + chr8_1:45537540-45537559 None:intergenic 35.0%
!!! CCACGCATCAGTTTTATTAT+TGG - chr8_1:45537537-45537556 Msa1196440:intron 35.0%
TTCACAACGAATTCACAACA+AGG - chr8_1:45537567-45537586 Msa1196440:intron 35.0%
ATGCAATATGTGGAGATATG+TGG - chr8_1:45538106-45538125 Msa1196440:intron 35.0%
GCATTCATAAGTCCTATATG+TGG - chr8_1:45538185-45538204 Msa1196440:intron 35.0%
AGATATGTAGAGGGATCAAT+CGG - chr8_1:45538228-45538247 Msa1196440:intron 35.0%
CATGTGGAGTTAGTAATTCT+AGG - chr8_1:45538458-45538477 Msa1196440:intron 35.0%
GAATATTATCTAACCCCTAG+TGG - chr8_1:45538550-45538569 Msa1196440:intron 35.0%
TATTTGTATGAATGGGCAGA+CGG - chr8_1:45538594-45538613 Msa1196440:intron 35.0%
ATGTGAGTAAAAGAGAAAGG+AGG + chr8_1:45538683-45538702 None:intergenic 35.0%
TTGCAAGATATATTGCCTTC+GGG - chr8_1:45538946-45538965 Msa1196440:intron 35.0%
TCAGAACAAAAAGGACCAAT+GGG + chr8_1:45539058-45539077 None:intergenic 35.0%
CTCCGTGATATTTCATCTTT+AGG - chr8_1:45539180-45539199 Msa1196440:intron 35.0%
CGTGATATTTCATCTTTAGG+TGG - chr8_1:45539183-45539202 Msa1196440:intron 35.0%
CTGTGTACAATTGCATACTT+AGG + chr8_1:45539250-45539269 None:intergenic 35.0%
GCAATTGTACACAGATGTTA+CGG - chr8_1:45539256-45539275 Msa1196440:intron 35.0%
CAATTGTACACAGATGTTAC+GGG - chr8_1:45539257-45539276 Msa1196440:intron 35.0%
!! CTGAACGTTATTTTCGATGA+AGG + chr8_1:45539323-45539342 None:intergenic 35.0%
CTTCATCGAAAATAACGTTC+AGG - chr8_1:45539321-45539340 Msa1196440:intron 35.0%
CAAAATTGCAAGGGTTCAAT+GGG + chr8_1:45539376-45539395 None:intergenic 35.0%
ACAAAATTGCAAGGGTTCAA+TGG + chr8_1:45539377-45539396 None:intergenic 35.0%
CAGGATGCATTCGAAAAATT+GGG + chr8_1:45539434-45539453 None:intergenic 35.0%
TCAGGATGCATTCGAAAAAT+TGG + chr8_1:45539435-45539454 None:intergenic 35.0%
TTATGTGGACATCTTGTATC+AGG + chr8_1:45539453-45539472 None:intergenic 35.0%
!! GTTAGGCGAGAAGTTTTATA+TGG - chr8_1:45539485-45539504 Msa1196440:intron 35.0%
GAAAAGATGAGAAGCAAAAG+AGG + chr8_1:45539517-45539536 None:intergenic 35.0%
ATCGAAGAACTGATCTAAAG+GGG + chr8_1:45539572-45539591 None:intergenic 35.0%
CAATCGAAGAACTGATCTAA+AGG + chr8_1:45539574-45539593 None:intergenic 35.0%
! TAGTCTTTTCGTTGTCATTG+TGG - chr8_1:45539787-45539806 Msa1196440:intron 35.0%
CAAAGACAAACAATCAAGCA+TGG + chr8_1:45539829-45539848 None:intergenic 35.0%
AGTTAATTTATGGTTGCACG+CGG - chr8_1:45539880-45539899 Msa1196440:intron 35.0%
TGAATCACTTCAAACCATCT+TGG - chr8_1:45539988-45540007 Msa1196440:intron 35.0%
GAATCACTTCAAACCATCTT+GGG - chr8_1:45539989-45540008 Msa1196440:intron 35.0%
! AAGATAGCTCTATCAACTCA+TGG + chr8_1:45540169-45540188 None:intergenic 35.0%
TTGTTCGTCTTGACATTGAA+AGG + chr8_1:45540221-45540240 None:intergenic 35.0%
ACCTTTCACCAGGAAAATAA+CGG + chr8_1:45540381-45540400 None:intergenic 35.0%
AAAAAAAGCCCCCAATGATT+TGG + chr8_1:45540552-45540571 None:intergenic 35.0%
!!! CTTTTTTTCCGCCTTTTAGA+CGG - chr8_1:45540564-45540583 Msa1196440:intron 35.0%
TTAGATCCTCCAAAATCGAA+CGG + chr8_1:45540942-45540961 None:intergenic 35.0%
ACTGAAAACGGTTATGATTG+AGG - chr8_1:45541083-45541102 Msa1196440:intron 35.0%
ACAAATCATTTGGCGCTAAA+AGG + chr8_1:45541175-45541194 None:intergenic 35.0%
! GTAATGGAACTGAGAAATAG+TGG - chr8_1:45541334-45541353 Msa1196440:intron 35.0%
!! AAATAGTGGGTAGAAAGTGT+TGG - chr8_1:45541348-45541367 Msa1196440:intron 35.0%
GAAAAGTGAGTCATACCTTA+AGG - chr8_1:45541370-45541389 Msa1196440:intron 35.0%
GATATTACTCTGCGATTACA+TGG - chr8_1:45541706-45541725 Msa1196440:intron 35.0%
! TGGAGGCTGAAAATTCATTT+TGG + chr8_1:45541854-45541873 None:intergenic 35.0%
!! GAAACTTGATTTTCAGGCAT+TGG + chr8_1:45541874-45541893 None:intergenic 35.0%
ATGCCTGAAAATCAAGTTTC+TGG - chr8_1:45541874-45541893 Msa1196440:CDS 35.0%
TGCCTGAAAATCAAGTTTCT+GGG - chr8_1:45541875-45541894 Msa1196440:CDS 35.0%
ACACAAATACCCATGATTTC+AGG + chr8_1:45541960-45541979 None:intergenic 35.0%
GAGGAAGAATTATCCGATGA+TGG - chr8_1:45532655-45532674 Msa1196440:intron 40.0%
GAAGAAGAGAAGGCTTAACA+TGG - chr8_1:45532693-45532712 Msa1196440:intron 40.0%
TAGGTGGAAGACAAAACAGT+TGG - chr8_1:45532846-45532865 Msa1196440:intron 40.0%
AGTGCTATCATTCTGTGTCT+TGG - chr8_1:45533048-45533067 Msa1196440:intron 40.0%
! CATTCTGTGTCTTGGTGATA+AGG - chr8_1:45533056-45533075 Msa1196440:intron 40.0%
!! TAAGGTGTGAGAGAAGTATC+AGG - chr8_1:45533074-45533093 Msa1196440:intron 40.0%
!! AAGGTGTGAGAGAAGTATCA+GGG - chr8_1:45533075-45533094 Msa1196440:intron 40.0%
ATTGTACATGACCAAGTCCT+TGG - chr8_1:45533135-45533154 Msa1196440:intron 40.0%
!! ACTCTACTTTTACCGAATGG+TGG - chr8_1:45533183-45533202 Msa1196440:intron 40.0%
!!! TAGGTTTTGACTCCACCATT+CGG + chr8_1:45533198-45533217 None:intergenic 40.0%
GGTGGAGTCAAAACCTATAA+TGG - chr8_1:45533201-45533220 Msa1196440:intron 40.0%
! ACCTATAATGGAGCAACTGA+CGG - chr8_1:45533213-45533232 Msa1196440:intron 40.0%
GGCGAACATAGATGTAAATC+TGG - chr8_1:45533261-45533280 Msa1196440:intron 40.0%
TAAAGCACACAGTAGGTGTA+AGG + chr8_1:45533302-45533321 None:intergenic 40.0%
GACCAAGTTCAAAGAGTTGA+AGG - chr8_1:45533420-45533439 Msa1196440:intron 40.0%
!! GAGTTGAAGGTTGATGATAG+TGG - chr8_1:45533433-45533452 Msa1196440:intron 40.0%
!! AAGGTTGATGATAGTGGAGA+AGG - chr8_1:45533439-45533458 Msa1196440:intron 40.0%
AGAAGGCTTGAATGTCTCAA+GGG - chr8_1:45533456-45533475 Msa1196440:intron 40.0%
GAGAAGTGAAAACAGAGGAA+AGG - chr8_1:45533480-45533499 Msa1196440:intron 40.0%
GAAGTGAAAACAGAGGAAAG+GGG - chr8_1:45533482-45533501 Msa1196440:intron 40.0%
AGAATTCCTGGTCAAAGTCT+AGG - chr8_1:45533512-45533531 Msa1196440:intron 40.0%
CAACTATGGTCACTTCAAGA+AGG - chr8_1:45533582-45533601 Msa1196440:intron 40.0%
TCACTTCAAGAAGGATTGTC+CGG - chr8_1:45533591-45533610 Msa1196440:intron 40.0%
CTCTTCACTTGCAATCTGAA+CGG + chr8_1:45533647-45533666 None:intergenic 40.0%
AGCACTAACTGTGACAAGTT+GGG - chr8_1:45533687-45533706 Msa1196440:intron 40.0%
! ACAAGTTGGGAACCTGAAAA+GGG - chr8_1:45533700-45533719 Msa1196440:intron 40.0%
TTATCACATCTGTCCGAGAA+AGG - chr8_1:45533747-45533766 Msa1196440:intron 40.0%
!! GAAACTTTGGAGCTGAAAGA+AGG - chr8_1:45533778-45533797 Msa1196440:intron 40.0%
! TGTTCGCCTTGGTAACAATA+AGG - chr8_1:45533807-45533826 Msa1196440:intron 40.0%
!! TGCAAGCCTTATTGTTACCA+AGG + chr8_1:45533816-45533835 None:intergenic 40.0%
GGCTTGCAAAATTCAAGGTA+TGG - chr8_1:45533828-45533847 Msa1196440:intron 40.0%
! TGACCGTGATTTCCTTTTGA+AGG - chr8_1:45533876-45533895 Msa1196440:intron 40.0%
CGATGCATGACCTATAATAG+TGG + chr8_1:45534065-45534084 None:intergenic 40.0%
CTCTGGACATAACTAAACTG+TGG - chr8_1:45534101-45534120 Msa1196440:intron 40.0%
! AAACTGTGGCATTTGAGGTT+AGG - chr8_1:45534115-45534134 Msa1196440:intron 40.0%
! CTAGCTAAACAAGGTTTGCT+AGG - chr8_1:45534166-45534185 Msa1196440:intron 40.0%
CACATTAGGCAAACAACACA+AGG - chr8_1:45534228-45534247 Msa1196440:intron 40.0%
ACAACACAAGGTGAAGTTTG+GGG - chr8_1:45534240-45534259 Msa1196440:intron 40.0%
TGGGTGTGCATAAATCTAGT+AGG - chr8_1:45534263-45534282 Msa1196440:intron 40.0%
!!! CCATGAGTTTTAACTGATGC+TGG + chr8_1:45534322-45534341 None:intergenic 40.0%
CCAGCATCAGTTAAAACTCA+TGG - chr8_1:45534319-45534338 Msa1196440:intron 40.0%
GCATCAGTTAAAACTCATGG+GGG - chr8_1:45534322-45534341 Msa1196440:intron 40.0%
! AATGAGTTTTGCAGGAAACG+AGG - chr8_1:45534529-45534548 Msa1196440:intron 40.0%
! TATAAAGAGGCATAGAACCG+TGG - chr8_1:45534552-45534571 Msa1196440:intron 40.0%
GTCTTGCTGAAAGAATGAAC+AGG - chr8_1:45534596-45534615 Msa1196440:intron 40.0%
AAGAATGAACAGGACCTTGT+TGG - chr8_1:45534606-45534625 Msa1196440:intron 40.0%
AGATCTTAAGACACCTATGG+AGG - chr8_1:45534735-45534754 Msa1196440:intron 40.0%
TTAAGACACCTATGGAGGTT+TGG - chr8_1:45534740-45534759 Msa1196440:intron 40.0%
ACTATCAGCTAGCAAGAGAT+AGG - chr8_1:45535120-45535139 Msa1196440:intron 40.0%
AGCTAGCAAGAGATAGGATA+AGG - chr8_1:45535126-45535145 Msa1196440:intron 40.0%
TCAGCATAACCGTATCTAAC+AGG + chr8_1:45535167-45535186 None:intergenic 40.0%
AGCTGAAGAATTGCAAGACT+CGG - chr8_1:45535211-45535230 Msa1196440:intron 40.0%
AATGCTTCCCTGAAGTTCTT+TGG + chr8_1:45535239-45535258 None:intergenic 40.0%
AAAGCAACGAAAGCAAGGAT+TGG - chr8_1:45535261-45535280 Msa1196440:intron 40.0%
TTGGTTGAAGGCAATGAATG+AGG - chr8_1:45535280-45535299 Msa1196440:intron 40.0%
CATTGGAAAAGAACCAGACT+TGG - chr8_1:45535312-45535331 Msa1196440:intron 40.0%
ACCTAAGAATCAAAGGGTAG+TGG - chr8_1:45535349-45535368 Msa1196440:intron 40.0%
CCTAAGAATCAAAGGGTAGT+GGG - chr8_1:45535350-45535369 Msa1196440:intron 40.0%
! GAAGAAAGAAGGTATACCAG+GGG - chr8_1:45535391-45535410 Msa1196440:intron 40.0%
ACAAGTCTTGCCTTATACCT+TGG + chr8_1:45535425-45535444 None:intergenic 40.0%
TAAGGCAAGACTTGTAGCAA+AGG - chr8_1:45535430-45535449 Msa1196440:intron 40.0%
AAGGCAAGACTTGTAGCAAA+GGG - chr8_1:45535431-45535450 Msa1196440:intron 40.0%
! TGTAGCAAAGGGTTTTACTC+AGG - chr8_1:45535442-45535461 Msa1196440:intron 40.0%
! CAATGAAATCTTTTCACCGG+TGG - chr8_1:45535481-45535500 Msa1196440:intron 40.0%
CAACTCTCCATGTAGAAATG+CGG + chr8_1:45535585-45535604 None:intergenic 40.0%
TTATCTTCCACGAAACCTTC+TGG + chr8_1:45535632-45535651 None:intergenic 40.0%
TCACAAAACCAGCCTTTACT+AGG + chr8_1:45535736-45535755 None:intergenic 40.0%
GGTAATGCAAAGAGGATACT+TGG - chr8_1:45535917-45535936 Msa1196440:intron 40.0%
TGCAAAGAGGATACTTGGTA+TGG - chr8_1:45535922-45535941 Msa1196440:intron 40.0%
ATCATAAGGGACCGAAACAA+AGG - chr8_1:45535947-45535966 Msa1196440:intron 40.0%
GAGTTGTTCTTATCTCAGCA+AGG - chr8_1:45535971-45535990 Msa1196440:intron 40.0%
TATCTCAGCAAGGTTACTTG+AGG - chr8_1:45535981-45536000 Msa1196440:intron 40.0%
ACTTTCTCTTCATCGGATTG+AGG + chr8_1:45536093-45536112 None:intergenic 40.0%
CCGATGAAGAGAAAGTAAGA+TGG - chr8_1:45536097-45536116 Msa1196440:intron 40.0%
!! TGGAAGCATCATGTATGGTA+TGG - chr8_1:45536145-45536164 Msa1196440:intron 40.0%
! TGGTATGGTTTGTAGTAGAC+CGG - chr8_1:45536160-45536179 Msa1196440:intron 40.0%
! AAGTCGGTTTATGGCAAATC+CGG - chr8_1:45536208-45536227 Msa1196440:intron 40.0%
! TTGAATGGGACTTTGAAAGG+TGG - chr8_1:45536272-45536291 Msa1196440:intron 40.0%
! AAGGTGGTCTGAAGTATACA+AGG - chr8_1:45536288-45536307 Msa1196440:intron 40.0%
AAGTATACAAGGTCACAACC+AGG - chr8_1:45536299-45536318 Msa1196440:intron 40.0%
AGTACATAGCCCTTGTTGAA+GGG - chr8_1:45536477-45536496 Msa1196440:intron 40.0%
AAGGAAGCCATATGGTTGAA+AGG - chr8_1:45536503-45536522 Msa1196440:intron 40.0%
GATTGAGACAAAGGAGATCA+TGG - chr8_1:45536667-45536686 Msa1196440:intron 40.0%
CCTTGATCTCGGTAATGATT+TGG + chr8_1:45536735-45536754 None:intergenic 40.0%
CCAAATCATTACCGAGATCA+AGG - chr8_1:45536732-45536751 Msa1196440:intron 40.0%
CAATGCTTGAACCTTGATCT+CGG + chr8_1:45536746-45536765 None:intergenic 40.0%
! ATCAAGGTTCAAGCATTGCT+TGG - chr8_1:45536748-45536767 Msa1196440:intron 40.0%
!!! TCATCACCATTTTGGAGTCA+AGG - chr8_1:45536843-45536862 Msa1196440:intron 40.0%
GACTCAAAAATGATGCATCC+TGG - chr8_1:45536885-45536904 Msa1196440:intron 40.0%
CATCCTGGAACTGTCAAAAT+CGG - chr8_1:45536900-45536919 Msa1196440:intron 40.0%
!! GCCGATTTTTACAGTATCAC+AGG + chr8_1:45536975-45536994 None:intergenic 40.0%
!!! AAAACGGTTTTTTCATGGGC+CGG - chr8_1:45537046-45537065 Msa1196440:intron 40.0%
AAAACCAAACGGAACAGAAC+CGG + chr8_1:45537068-45537087 None:intergenic 40.0%
!!! CTGTTCCGTTTGGTTTTTTG+AGG - chr8_1:45537071-45537090 Msa1196440:intron 40.0%
GCATCCCTCAAAAAACCAAA+CGG + chr8_1:45537079-45537098 None:intergenic 40.0%
ATTCTCTTGGCAACAACACT+AGG - chr8_1:45537193-45537212 Msa1196440:intron 40.0%
TTCTCTTGGCAACAACACTA+GGG - chr8_1:45537194-45537213 Msa1196440:intron 40.0%
TCTAATGATGACCTACTCTG+GGG + chr8_1:45537395-45537414 None:intergenic 40.0%
GTCTAATGATGACCTACTCT+GGG + chr8_1:45537396-45537415 None:intergenic 40.0%
AAGCAATCAATTGAAGCGGA+TGG + chr8_1:45537503-45537522 None:intergenic 40.0%
ATCCGCTTCAATTGATTGCT+TGG - chr8_1:45537502-45537521 Msa1196440:intron 40.0%
AAGGATGAGCCAATGATTGT+TGG - chr8_1:45537868-45537887 Msa1196440:intron 40.0%
CATGTGATACCATTGGATGT+TGG + chr8_1:45538265-45538284 None:intergenic 40.0%
CTACATGCATGTGATACCAT+TGG + chr8_1:45538272-45538291 None:intergenic 40.0%
CATTCATACAAATAGGCAGG+CGG + chr8_1:45538588-45538607 None:intergenic 40.0%
GCCTGCCTATTTGTATGAAT+GGG - chr8_1:45538587-45538606 Msa1196440:intron 40.0%
GTCTGCCCATTCATACAAAT+AGG + chr8_1:45538595-45538614 None:intergenic 40.0%
TGCAAGATATATTGCCTTCG+GGG - chr8_1:45538947-45538966 Msa1196440:intron 40.0%
CTCAGAACAAAAAGGACCAA+TGG + chr8_1:45539059-45539078 None:intergenic 40.0%
! AGTCGACTCTCAGAACAAAA+AGG + chr8_1:45539067-45539086 None:intergenic 40.0%
GTTGTCTAAGTCTACATGGA+TGG - chr8_1:45539139-45539158 Msa1196440:intron 40.0%
TTTCATCTTTAGGTGGACAG+TGG - chr8_1:45539190-45539209 Msa1196440:intron 40.0%
! TGTTTCTACTATTCGTTCGC+CGG - chr8_1:45539295-45539314 Msa1196440:intron 40.0%
!! GTTATTTTCGATGAAGGGTC+CGG + chr8_1:45539317-45539336 None:intergenic 40.0%
!! TTCAGGTTGATGTATCCCTA+CGG - chr8_1:45539338-45539357 Msa1196440:intron 40.0%
AAAATTGGGCCTAAAGAAGG+AGG + chr8_1:45539420-45539439 None:intergenic 40.0%
CGAAAAATTGGGCCTAAAGA+AGG + chr8_1:45539423-45539442 None:intergenic 40.0%
AACAAACGAAGGCAGTTATG+TGG + chr8_1:45539468-45539487 None:intergenic 40.0%
CATAACTGCCTTCGTTTGTT+AGG - chr8_1:45539468-45539487 Msa1196440:intron 40.0%
! TTGCTTCTCATCTTTTCGGT+CGG - chr8_1:45539520-45539539 Msa1196440:intron 40.0%
TCGAAGAACTGATCTAAAGG+GGG + chr8_1:45539571-45539590 None:intergenic 40.0%
ATGCTACAACACAGAGTGTA+AGG + chr8_1:45539700-45539719 None:intergenic 40.0%
GAGTGTAGTCTGTTAATCTG+AGG - chr8_1:45539754-45539773 Msa1196440:intron 40.0%
AGAGAAGAAGTTGACGAAAG+AGG + chr8_1:45539856-45539875 None:intergenic 40.0%
GTTAATTTATGGTTGCACGC+GGG - chr8_1:45539881-45539900 Msa1196440:intron 40.0%
! AATTTGCATTTTACCACGCC+TGG - chr8_1:45540239-45540258 Msa1196440:intron 40.0%
!! AGGGTATTCCGTTATTTTCC+TGG - chr8_1:45540370-45540389 Msa1196440:intron 40.0%
!! TCCGTTATTTTCCTGGTGAA+AGG - chr8_1:45540377-45540396 Msa1196440:intron 40.0%
TAAGCCTTCAAATCACTACG+GGG + chr8_1:45540486-45540505 None:intergenic 40.0%
GTAAGCCTTCAAATCACTAC+GGG + chr8_1:45540487-45540506 None:intergenic 40.0%
GGTAAGCCTTCAAATCACTA+CGG + chr8_1:45540488-45540507 None:intergenic 40.0%
AGGATCTTGTTCATCTTCTG+TGG - chr8_1:45540755-45540774 Msa1196440:intron 40.0%
ATCTTGTTCATCTTCTGTGG+CGG - chr8_1:45540758-45540777 Msa1196440:intron 40.0%
AGATTCACCAGTTCGAGAAT+CGG - chr8_1:45540914-45540933 Msa1196440:intron 40.0%
!! TTTTGGAGGATCTAAATCGC+AGG - chr8_1:45540947-45540966 Msa1196440:intron 40.0%
GAGGAACGTGTAACTGAAAA+CGG - chr8_1:45541071-45541090 Msa1196440:intron 40.0%
CGCATAACATAGAACGGTTA+CGG - chr8_1:45541108-45541127 Msa1196440:intron 40.0%
ATAACATAGAACGGTTACGG+TGG - chr8_1:45541111-45541130 Msa1196440:intron 40.0%
ATCATTTGGCGCTAAAAGGA+GGG + chr8_1:45541171-45541190 None:intergenic 40.0%
AATCATTTGGCGCTAAAAGG+AGG + chr8_1:45541172-45541191 None:intergenic 40.0%
! TTAGCGCCAAATGATTTGTC+CGG - chr8_1:45541176-45541195 Msa1196440:intron 40.0%
TTCTCACCGGACAAATCATT+TGG + chr8_1:45541185-45541204 None:intergenic 40.0%
! AATGATTTGTCCGGTGAGAA+TGG - chr8_1:45541185-45541204 Msa1196440:intron 40.0%
TCTGACGCTCAAATCAGTAA+TGG - chr8_1:45541318-45541337 Msa1196440:intron 40.0%
!! GTTAACTTGCATCACCCTTA+AGG + chr8_1:45541388-45541407 None:intergenic 40.0%
AGATTATGCAGCGTGTGATT+AGG - chr8_1:45541443-45541462 Msa1196440:intron 40.0%
GATTATGCAGCGTGTGATTA+GGG - chr8_1:45541444-45541463 Msa1196440:intron 40.0%
! CTTAAATGCAAAGTGCCACA+CGG + chr8_1:45541517-45541536 None:intergenic 40.0%
GACGTTAATCAATGGTGACA+TGG - chr8_1:45541811-45541830 Msa1196440:CDS 40.0%
!!! ACTTGATTTTCAGGCATTGG+AGG + chr8_1:45541871-45541890 None:intergenic 40.0%
! AGCCCAGAAACTTGATTTTC+AGG + chr8_1:45541880-45541899 None:intergenic 40.0%
TGGAGAAGAAGCTAATGTCG+AGG - chr8_1:45532636-45532655 Msa1196440:CDS 45.0%
AGTTAGGGGAGAAGAAGAGA+AGG - chr8_1:45532683-45532702 Msa1196440:intron 45.0%
GAAACAAGCTTGAACCTGAG+AGG - chr8_1:45532752-45532771 Msa1196440:intron 45.0%
AGAGGAAAATGCAGCTAGCA+AGG - chr8_1:45532770-45532789 Msa1196440:intron 45.0%
GAGGAAAATGCAGCTAGCAA+GGG - chr8_1:45532771-45532790 Msa1196440:intron 45.0%
GGTTTCAAAACAGAAGGGCT+AGG - chr8_1:45532827-45532846 Msa1196440:intron 45.0%
TTCAAAACAGAAGGGCTAGG+TGG - chr8_1:45532830-45532849 Msa1196440:intron 45.0%
AGACTACTGCTGTGTCTATG+TGG - chr8_1:45533098-45533117 Msa1196440:intron 45.0%
TTGTCTATGTGCCAAGGACT+TGG + chr8_1:45533149-45533168 None:intergenic 45.0%
CAGACATTGTCTATGTGCCA+AGG + chr8_1:45533155-45533174 None:intergenic 45.0%
TCCGTCAGTTGCTCCATTAT+AGG + chr8_1:45533217-45533236 None:intergenic 45.0%
ACCTACTGTGTGCTTTACCT+AGG - chr8_1:45533305-45533324 Msa1196440:intron 45.0%
ACCTAGGTAAAGCACACAGT+AGG + chr8_1:45533309-45533328 None:intergenic 45.0%
!! CAAAGAGGGCACTATCACTT+TGG - chr8_1:45533363-45533382 Msa1196440:intron 45.0%
GAGAAGGCTTGAATGTCTCA+AGG - chr8_1:45533455-45533474 Msa1196440:intron 45.0%
GAAGGCTTGAATGTCTCAAG+GGG - chr8_1:45533457-45533476 Msa1196440:intron 45.0%
AAGGCTTGAATGTCTCAAGG+GGG - chr8_1:45533458-45533477 Msa1196440:intron 45.0%
GAAAACAGAGGAAAGGGGAA+AGG - chr8_1:45533487-45533506 Msa1196440:intron 45.0%
TGGTCAAAGTCTAGGCCAAA+GGG - chr8_1:45533520-45533539 Msa1196440:intron 45.0%
AAGGATTGTCCGGAGAGAAA+AGG - chr8_1:45533601-45533620 Msa1196440:intron 45.0%
! CTTCCATTGCCTTTTCTCTC+CGG + chr8_1:45533613-45533632 None:intergenic 45.0%
GAGAGAAAAGGCAATGGAAG+TGG - chr8_1:45533613-45533632 Msa1196440:intron 45.0%
TCACTTGCAATCTGAACGGA+TGG + chr8_1:45533643-45533662 None:intergenic 45.0%
CGTTCAGATTGCAAGTGAAG+AGG - chr8_1:45533645-45533664 Msa1196440:intron 45.0%
CAGATTGCAAGTGAAGAGGA+AGG - chr8_1:45533649-45533668 Msa1196440:intron 45.0%
GAGCACTAACTGTGACAAGT+TGG - chr8_1:45533686-45533705 Msa1196440:intron 45.0%
! GACAAGTTGGGAACCTGAAA+AGG - chr8_1:45533699-45533718 Msa1196440:intron 45.0%
TTGGGAACCTGAAAAGGGTT+GGG - chr8_1:45533705-45533724 Msa1196440:intron 45.0%
!! ACTTTGGAGCTGAAAGAAGG+TGG - chr8_1:45533781-45533800 Msa1196440:intron 45.0%
GTTAGGTCATGTCAGTGAGA+GGG - chr8_1:45534132-45534151 Msa1196440:intron 45.0%
TTAGGTCATGTCAGTGAGAG+GGG - chr8_1:45534133-45534152 Msa1196440:intron 45.0%
TCAGTTAAAACTCATGGGGG+AGG - chr8_1:45534325-45534344 Msa1196440:intron 45.0%
!! ACTGCTCTGAAACAAACTCC+AGG + chr8_1:45534507-45534526 None:intergenic 45.0%
GCAGGAAACGAGGTATAAAG+AGG - chr8_1:45534539-45534558 Msa1196440:intron 45.0%
GCATACACACCTCAACAGAA+TGG - chr8_1:45534574-45534593 Msa1196440:intron 45.0%
TCAGCAAGACCATTCTGTTG+AGG + chr8_1:45534586-45534605 None:intergenic 45.0%
CGTGTGAGGTGTATGTTGTT+GGG - chr8_1:45534631-45534650 Msa1196440:intron 45.0%
TGGACTGTCCAAGAGTTTCT+GGG - chr8_1:45534657-45534676 Msa1196440:intron 45.0%
AGCATTTGCTCATGTGAGAC+AGG - chr8_1:45534810-45534829 Msa1196440:intron 45.0%
! GGTTATCCTGAAGGTGTGAA+AGG - chr8_1:45534871-45534890 Msa1196440:intron 45.0%
CTGTAACCTTTCACACCTTC+AGG + chr8_1:45534880-45534899 None:intergenic 45.0%
GTGTGAAAGGTTACAGACTG+TGG - chr8_1:45534884-45534903 Msa1196440:intron 45.0%
AGGTTACAGACTGTGGAAGA+TGG - chr8_1:45534891-45534910 Msa1196440:intron 45.0%
CCTGGATACAAGCTCAGAAA+CGG - chr8_1:45534990-45535009 Msa1196440:intron 45.0%
CTGGATACAAGCTCAGAAAC+GGG - chr8_1:45534991-45535010 Msa1196440:intron 45.0%
TGGATACAAGCTCAGAAACG+GGG - chr8_1:45534992-45535011 Msa1196440:intron 45.0%
CCTACCACTGATGAAAGGAA+GGG - chr8_1:45535042-45535061 Msa1196440:intron 45.0%
CTACCACTGATGAAAGGAAG+GGG - chr8_1:45535043-45535062 Msa1196440:intron 45.0%
TCTCTTGCTAGCTGATAGTC+AGG + chr8_1:45535119-45535138 None:intergenic 45.0%
GCATAACCGTATCTAACAGG+TGG + chr8_1:45535164-45535183 None:intergenic 45.0%
ACTCGGAACCAAAGAACTTC+AGG - chr8_1:45535228-45535247 Msa1196440:intron 45.0%
CTCGGAACCAAAGAACTTCA+GGG - chr8_1:45535229-45535248 Msa1196440:intron 45.0%
!! CGAAAGCAAGGATTGGTTGA+AGG - chr8_1:45535268-45535287 Msa1196440:intron 45.0%
CCCACTACCCTTTGATTCTT+AGG + chr8_1:45535353-45535372 None:intergenic 45.0%
! AGCAAAGGGTTTTACTCAGG+TGG - chr8_1:45535445-45535464 Msa1196440:intron 45.0%
! AAGGGTTTTACTCAGGTGGA+AGG - chr8_1:45535449-45535468 Msa1196440:intron 45.0%
! AGGGTTTTACTCAGGTGGAA+GGG - chr8_1:45535450-45535469 Msa1196440:intron 45.0%
GTGAAGACCGCATTTCTACA+TGG - chr8_1:45535575-45535594 Msa1196440:intron 45.0%
CGCATTTCTACATGGAGAGT+TGG - chr8_1:45535583-45535602 Msa1196440:intron 45.0%
! ATGGGTTGAAGCAAAGTCCA+AGG - chr8_1:45535684-45535703 Msa1196440:intron 45.0%
GATGAGTTCCTAGTAAAGGC+TGG - chr8_1:45535725-45535744 Msa1196440:intron 45.0%
GCAAGGTTACTTGAGGAAAG+TGG - chr8_1:45535988-45536007 Msa1196440:intron 45.0%
AGGTTACTTGAGGAAAGTGG+TGG - chr8_1:45535991-45536010 Msa1196440:intron 45.0%
! AGTCGGTTTATGGCAAATCC+GGG - chr8_1:45536209-45536228 Msa1196440:intron 45.0%
ATACAAGGTCACAACCAGGA+AGG - chr8_1:45536303-45536322 Msa1196440:intron 45.0%
TACAAGGTCACAACCAGGAA+GGG - chr8_1:45536304-45536323 Msa1196440:intron 45.0%
TTTGGAGGGATATGTGGATG+CGG - chr8_1:45536331-45536350 Msa1196440:intron 45.0%
TGTTCGGTACAGCAGTAACT+TGG - chr8_1:45536408-45536427 Msa1196440:intron 45.0%
GAGTACATAGCCCTTGTTGA+AGG - chr8_1:45536476-45536495 Msa1196440:intron 45.0%
GTACATAGCCCTTGTTGAAG+GGG - chr8_1:45536478-45536497 Msa1196440:intron 45.0%
TTCCTTGACCCCTTCAACAA+GGG + chr8_1:45536489-45536508 None:intergenic 45.0%
TGAGACAAAGGAGATCATGG+TGG - chr8_1:45536670-45536689 Msa1196440:intron 45.0%
!! GATTTGGTGAACATGTCTGC+TGG + chr8_1:45536719-45536738 None:intergenic 45.0%
!! GAGAGCATCAAGGTGATTGA+TGG - chr8_1:45536809-45536828 Msa1196440:intron 45.0%
!!! TCACCATTTTGGAGTCAAGG+TGG - chr8_1:45536846-45536865 Msa1196440:intron 45.0%
TCTCCACCTTGACTCCAAAA+TGG + chr8_1:45536852-45536871 None:intergenic 45.0%
GAGTCAAGGTGGAGAATTGT+TGG - chr8_1:45536857-45536876 Msa1196440:intron 45.0%
ACTTCTGCAGCGCAACAAAT+CGG + chr8_1:45537021-45537040 None:intergenic 45.0%
TTGGCAACAACACTAGGGTT+GGG - chr8_1:45537199-45537218 Msa1196440:intron 45.0%
AGGATTGAGTCTCTTGGTCA+CGG - chr8_1:45537256-45537275 Msa1196440:intron 45.0%
CTAATGATGACCTACTCTGG+GGG + chr8_1:45537394-45537413 None:intergenic 45.0%
GGTCTAATGATGACCTACTC+TGG + chr8_1:45537397-45537416 None:intergenic 45.0%
AGGTCATCATTAGACCGAAC+TGG - chr8_1:45537401-45537420 Msa1196440:intron 45.0%
GGTCATCATTAGACCGAACT+GGG - chr8_1:45537402-45537421 Msa1196440:intron 45.0%
!!! AAGGAGCACTTTTGCACTTC+AGG - chr8_1:45537586-45537605 Msa1196440:intron 45.0%
CGCCTGCCTATTTGTATGAA+TGG - chr8_1:45538586-45538605 Msa1196440:intron 45.0%
GCCCATTCATACAAATAGGC+AGG + chr8_1:45538591-45538610 None:intergenic 45.0%
! TTAGGCTCTGATTAGGGTGT+TGG - chr8_1:45538707-45538726 Msa1196440:intron 45.0%
! TAGGCTCTGATTAGGGTGTT+GGG - chr8_1:45538708-45538727 Msa1196440:intron 45.0%
TGTAACACTCTAAACCCCGA+AGG + chr8_1:45538964-45538983 None:intergenic 45.0%
! TCGGGGTTTAGAGTGTTACA+TGG - chr8_1:45538964-45538983 Msa1196440:intron 45.0%
GAGATGGTCTCATTCCTTTG+TGG - chr8_1:45539022-45539041 Msa1196440:intron 45.0%
ATGGTCTCATTCCTTTGTGG+CGG - chr8_1:45539025-45539044 Msa1196440:intron 45.0%
GAACAAAAAGGACCAATGGG+CGG + chr8_1:45539055-45539074 None:intergenic 45.0%
! GAAAGCCTTGTAGCATCTGT+TGG - chr8_1:45539115-45539134 Msa1196440:intron 45.0%
TGGCGTTGTCTAAGTCTACA+TGG - chr8_1:45539135-45539154 Msa1196440:intron 45.0%
GAAATATCACGGAGAGAACG+AGG + chr8_1:45539174-45539193 None:intergenic 45.0%
ATCTTTAGGTGGACAGTGGA+GGG - chr8_1:45539194-45539213 Msa1196440:intron 45.0%
GACGGCATCTATTACTACGA+GGG - chr8_1:45539217-45539236 Msa1196440:intron 45.0%
GCATCTATTACTACGAGGGT+CGG - chr8_1:45539221-45539240 Msa1196440:intron 45.0%
CATCTATTACTACGAGGGTC+GGG - chr8_1:45539222-45539241 Msa1196440:intron 45.0%
CAGATGTTACGGGAACAACA+TGG - chr8_1:45539267-45539286 Msa1196440:intron 45.0%
TGTTACGGGAACAACATGGA+AGG - chr8_1:45539271-45539290 Msa1196440:intron 45.0%
GTTGATGTATCCCTACGGAT+GGG - chr8_1:45539343-45539362 Msa1196440:intron 45.0%
ACTTCTCGCCTAACAAACGA+AGG + chr8_1:45539479-45539498 None:intergenic 45.0%
GCGGATTCTTTCAATGGTTG+AGG - chr8_1:45539657-45539676 Msa1196440:intron 45.0%
CTACAACACAGAGTGTAAGG+AGG + chr8_1:45539697-45539716 None:intergenic 45.0%
CTGTGTTGTAGCATTCGTGA+AGG - chr8_1:45539706-45539725 Msa1196440:intron 45.0%
AAACAGGTCACTCGTGTCTT+TGG - chr8_1:45539905-45539924 Msa1196440:intron 45.0%
TGCAAATTCAAGGAAGAGCC+GGG + chr8_1:45539942-45539961 None:intergenic 45.0%
CTGCAAATTCAAGGAAGAGC+CGG + chr8_1:45539943-45539962 None:intergenic 45.0%
GAAGTATAAGGCTCCCAAGA+TGG + chr8_1:45540005-45540024 None:intergenic 45.0%
!! ATAGCGGGTGAGGAAGTATA+AGG + chr8_1:45540017-45540036 None:intergenic 45.0%
CTTCTGTCTCGCAGTAAAGT+GGG - chr8_1:45540118-45540137 Msa1196440:intron 45.0%
ACCCTTGAACCAAGTCATGA+CGG - chr8_1:45540193-45540212 Msa1196440:intron 45.0%
TACTGTCCTTGATTACCACC+AGG + chr8_1:45540267-45540286 None:intergenic 45.0%
CCAAAGTTGGAGACCTATGA+CGG + chr8_1:45540326-45540345 None:intergenic 45.0%
TCATAGGTCTCCAACTTTGG+CGG - chr8_1:45540326-45540345 Msa1196440:intron 45.0%
TTTGCGAAAATGCAGGGGAT+AGG - chr8_1:45540350-45540369 Msa1196440:intron 45.0%
TTGCGAAAATGCAGGGGATA+GGG - chr8_1:45540351-45540370 Msa1196440:intron 45.0%
TTCAAATCACTACGGGGGAA+AGG + chr8_1:45540480-45540499 None:intergenic 45.0%
TTTCCCCCGTAGTGATTTGA+AGG - chr8_1:45540479-45540498 Msa1196440:intron 45.0%
AAGCCTTCAAATCACTACGG+GGG + chr8_1:45540485-45540504 None:intergenic 45.0%
ACTTCCCCCATCCAAATCAT+TGG - chr8_1:45540538-45540557 Msa1196440:intron 45.0%
CTTCCCCCATCCAAATCATT+GGG - chr8_1:45540539-45540558 Msa1196440:intron 45.0%
TTCCCCCATCCAAATCATTG+GGG - chr8_1:45540540-45540559 Msa1196440:intron 45.0%
! AAGCCCCCAATGATTTGGAT+GGG + chr8_1:45540547-45540566 None:intergenic 45.0%
! AAAGCCCCCAATGATTTGGA+TGG + chr8_1:45540548-45540567 None:intergenic 45.0%
ATCCCGATGAACCGTCTAAA+AGG + chr8_1:45540578-45540597 None:intergenic 45.0%
! TTTTAGACGGTTCATCGGGA+TGG - chr8_1:45540577-45540596 Msa1196440:intron 45.0%
! CTACCGCTAACGGTATTTTG+TGG - chr8_1:45540612-45540631 Msa1196440:intron 45.0%
GCACCACAAAATACCGTTAG+CGG + chr8_1:45540618-45540637 None:intergenic 45.0%
! TTGAGCCTCTTCGATTTGTG+TGG - chr8_1:45540646-45540665 Msa1196440:intron 45.0%
GAATAACAGACTTGAACGCG+TGG + chr8_1:45540705-45540724 None:intergenic 45.0%
TCAAGTTCACAAGGTTCGTC+AGG - chr8_1:45540735-45540754 Msa1196440:intron 45.0%
AAGGACAGTTGTGTTCATCG+CGG - chr8_1:45540841-45540860 Msa1196440:intron 45.0%
GAGCATTAATCCTAGTGTCG+AGG - chr8_1:45540873-45540892 Msa1196440:intron 45.0%
CTCGAACTGGTGAATCTTGA+AGG + chr8_1:45540911-45540930 None:intergenic 45.0%
! GAATCGGTACCGTTCGATTT+TGG - chr8_1:45540930-45540949 Msa1196440:intron 45.0%
AAGTAATGGCCAGAACTCGT+AGG + chr8_1:45541015-45541034 None:intergenic 45.0%
! ACGAGTTCTGGCCATTACTT+CGG - chr8_1:45541015-45541034 Msa1196440:intron 45.0%
CATTACTTCGGAGAAAGGAG+CGG - chr8_1:45541027-45541046 Msa1196440:intron 45.0%
GTAACTGCCAACAGTTATGG+TGG - chr8_1:45541049-45541068 Msa1196440:intron 45.0%
! GAGGAGCGCATAACATAGAA+CGG - chr8_1:45541102-45541121 Msa1196440:intron 45.0%
TCATTTGGCGCTAAAAGGAG+GGG + chr8_1:45541170-45541189 None:intergenic 45.0%
AATGGATGAGTGGCAACGTT+GGG - chr8_1:45541203-45541222 Msa1196440:intron 45.0%
TCCAATGCGCGCCTATATAA+GGG + chr8_1:45541410-45541429 None:intergenic 45.0%
CACGCTGCATAATCTAGAGA+CGG + chr8_1:45541438-45541457 None:intergenic 45.0%
ACGGTAGAAAGACACGTGTA+GGG - chr8_1:45541467-45541486 Msa1196440:intron 45.0%
GTGGCACTTTGCATTTAAGC+TGG - chr8_1:45541518-45541537 Msa1196440:intron 45.0%
! GCATAACTTGCACCGTCTTA+AGG + chr8_1:45541565-45541584 None:intergenic 45.0%
! TTTCCACTCTTGGGCTGTTT+TGG - chr8_1:45541911-45541930 Msa1196440:CDS 45.0%
!! TCCGATGATGGATCGCAGTT+AGG - chr8_1:45532667-45532686 Msa1196440:intron 50.0%
CCCTAACTGCGATCCATCAT+CGG + chr8_1:45532671-45532690 None:intergenic 50.0%
!! CCGATGATGGATCGCAGTTA+GGG - chr8_1:45532668-45532687 Msa1196440:intron 50.0%
!! CGATGATGGATCGCAGTTAG+GGG - chr8_1:45532669-45532688 Msa1196440:intron 50.0%
! GCTAGCTGCATTTTCCTCTC+AGG + chr8_1:45532769-45532788 None:intergenic 50.0%
!! AGAGGGCACTATCACTTTGG+AGG - chr8_1:45533366-45533385 Msa1196440:intron 50.0%
AGGGGGAGAAGTGAAAACAG+AGG - chr8_1:45533475-45533494 Msa1196440:intron 50.0%
AGGGGAAAGGCAAGAATTCC+TGG - chr8_1:45533500-45533519 Msa1196440:intron 50.0%
CTTTGGCCTAGACTTTGACC+AGG + chr8_1:45533521-45533540 None:intergenic 50.0%
CTGGTCAAAGTCTAGGCCAA+AGG - chr8_1:45533519-45533538 Msa1196440:intron 50.0%
TCAAAGTCTAGGCCAAAGGG+TGG - chr8_1:45533523-45533542 Msa1196440:intron 50.0%
TGTCCGGAGAGAAAAGGCAA+TGG - chr8_1:45533607-45533626 Msa1196440:intron 50.0%
! GAGGAAGGTTATGAGAGTGC+TGG - chr8_1:45533664-45533683 Msa1196440:intron 50.0%
GTTGGGAACCTGAAAAGGGT+TGG - chr8_1:45533704-45533723 Msa1196440:intron 50.0%
ACCTGAAAAGGGTTGGGTCT+TGG - chr8_1:45533711-45533730 Msa1196440:intron 50.0%
! TCCAAGACCCAACCCTTTTC+AGG + chr8_1:45533715-45533734 None:intergenic 50.0%
GGTTGCTAGTGTAGACACTC+TGG - chr8_1:45534084-45534103 Msa1196440:intron 50.0%
GGTTAGGTCATGTCAGTGAG+AGG - chr8_1:45534131-45534150 Msa1196440:intron 50.0%
ACACAAGGTGAAGTTTGGGG+TGG - chr8_1:45534243-45534262 Msa1196440:intron 50.0%
! CACAAGGTGAAGTTTGGGGT+GGG - chr8_1:45534244-45534263 Msa1196440:intron 50.0%
GTTGAGAACTGACAATGGCC+TGG - chr8_1:45534486-45534505 Msa1196440:intron 50.0%
CTGTTGAGGTGTGTATGCCA+CGG + chr8_1:45534572-45534591 None:intergenic 50.0%
GCGTGTGAGGTGTATGTTGT+TGG - chr8_1:45534630-45534649 Msa1196440:intron 50.0%
AGGTGTATGTTGTTGGGAGC+TGG - chr8_1:45534637-45534656 Msa1196440:intron 50.0%
CTGGACTGTCCAAGAGTTTC+TGG - chr8_1:45534656-45534675 Msa1196440:intron 50.0%
GGACTGTCCAAGAGTTTCTG+GGG - chr8_1:45534658-45534677 Msa1196440:intron 50.0%
AGCTTCTCCCCAGAAACTCT+TGG + chr8_1:45534668-45534687 None:intergenic 50.0%
ACACCTATGGAGGTTTGGAG+TGG - chr8_1:45534745-45534764 Msa1196440:intron 50.0%
! CACCTATGGAGGTTTGGAGT+GGG - chr8_1:45534746-45534765 Msa1196440:intron 50.0%
AGACTGTGGAAGATGGAACC+TGG - chr8_1:45534898-45534917 Msa1196440:intron 50.0%
CCGTTTCTGAGCTTGTATCC+AGG + chr8_1:45534993-45535012 None:intergenic 50.0%
GGATACAAGCTCAGAAACGG+GGG - chr8_1:45534993-45535012 Msa1196440:intron 50.0%
TGGAGCCTACCACTGATGAA+AGG - chr8_1:45535037-45535056 Msa1196440:intron 50.0%
GCCTACCACTGATGAAAGGA+AGG - chr8_1:45535041-45535060 Msa1196440:intron 50.0%
CCCTTCCTTTCATCAGTGGT+AGG + chr8_1:45535045-45535064 None:intergenic 50.0%
CCTTCACTCTCATCAGGTAC+TGG + chr8_1:45535080-45535099 None:intergenic 50.0%
CCAGTACCTGATGAGAGTGA+AGG - chr8_1:45535077-45535096 Msa1196440:intron 50.0%
! TCTTGGCCTTCACTCTCATC+AGG + chr8_1:45535086-45535105 None:intergenic 50.0%
!! AAAGGGTAGTGGGAAGCAAG+TGG - chr8_1:45535360-45535379 Msa1196440:intron 50.0%
!! AAGGGTAGTGGGAAGCAAGT+GGG - chr8_1:45535361-45535380 Msa1196440:intron 50.0%
! GGTCGAAGCACCAAGGTATA+AGG - chr8_1:45535412-45535431 Msa1196440:intron 50.0%
GCAACAACCAGAAGGTTTCG+TGG - chr8_1:45535622-45535641 Msa1196440:intron 50.0%
TGAAGCAAAGTCCAAGGCAG+TGG - chr8_1:45535690-45535709 Msa1196440:intron 50.0%
! ACTTGAGGAAAGTGGTGGAG+CGG - chr8_1:45535996-45536015 Msa1196440:intron 50.0%
TAAGGTCGTTGGCACTCTCT+TGG - chr8_1:45536036-45536055 Msa1196440:intron 50.0%
! AGGGTACTCCCTATGCAAGT+GGG - chr8_1:45536120-45536139 Msa1196440:intron 50.0%
CTTCCAACCCCACTTGCATA+GGG + chr8_1:45536131-45536150 None:intergenic 50.0%
!! GGGGTTGGAAGCATCATGTA+TGG - chr8_1:45536140-45536159 Msa1196440:intron 50.0%
!! TGCACTGGCAAGCTTTGAAG+TGG - chr8_1:45536237-45536256 Msa1196440:intron 50.0%
!! GCACTGGCAAGCTTTGAAGT+GGG - chr8_1:45536238-45536257 Msa1196440:intron 50.0%
ACAACCAGGAAGGGATGCTT+TGG - chr8_1:45536313-45536332 Msa1196440:intron 50.0%
!! GGATGCTTTGGAGGGATATG+TGG - chr8_1:45536325-45536344 Msa1196440:intron 50.0%
! TATGTGGATGCGGACTATGC+AGG - chr8_1:45536341-45536360 Msa1196440:intron 50.0%
CGGTACAGCAGTAACTTGGA+AGG - chr8_1:45536412-45536431 Msa1196440:intron 50.0%
CTTCCTTGACCCCTTCAACA+AGG + chr8_1:45536490-45536509 None:intergenic 50.0%
AAGGGGTCAAGGAAGCCATA+TGG - chr8_1:45536495-45536514 Msa1196440:intron 50.0%
! GGAGATCATGGTGGAGAAAG+TGG - chr8_1:45536679-45536698 Msa1196440:intron 50.0%
! CATGGTGGAGAAAGTGGCAT+CGG - chr8_1:45536685-45536704 Msa1196440:intron 50.0%
!! GAAGGTTGGAGAGAGCATCA+AGG - chr8_1:45536799-45536818 Msa1196440:intron 50.0%
TGTAAAAATCGGCGCCCGAA+TGG - chr8_1:45536982-45537001 Msa1196440:intron 50.0%
GGCGCCCGAATGGTATAAAT+CGG - chr8_1:45536992-45537011 Msa1196440:intron 50.0%
GCGCCCGAATGGTATAAATC+GGG - chr8_1:45536993-45537012 Msa1196440:intron 50.0%
CGCCCGAATGGTATAAATCG+GGG - chr8_1:45536994-45537013 Msa1196440:intron 50.0%
GGCCCCGATTTATACCATTC+GGG + chr8_1:45536999-45537018 None:intergenic 50.0%
GGGCCCCGATTTATACCATT+CGG + chr8_1:45537000-45537019 None:intergenic 50.0%
CTTCTGCAGCGCAACAAATC+GGG + chr8_1:45537020-45537039 None:intergenic 50.0%
CTTGGCAACAACACTAGGGT+TGG - chr8_1:45537198-45537217 Msa1196440:intron 50.0%
GGATTGAGTCTCTTGGTCAC+GGG - chr8_1:45537257-45537276 Msa1196440:intron 50.0%
TCTAACCCCTAGTGGTCGTT+TGG - chr8_1:45538558-45538577 Msa1196440:intron 50.0%
GTCAACCAAACGACCACTAG+GGG + chr8_1:45538566-45538585 None:intergenic 50.0%
GGTCAACCAAACGACCACTA+GGG + chr8_1:45538567-45538586 None:intergenic 50.0%
! GCTTGCTAGTGAGTTGCTTG+AGG - chr8_1:45538643-45538662 Msa1196440:intron 50.0%
TGAGTTGCTTGAGGATAGCG+AGG - chr8_1:45538652-45538671 Msa1196440:intron 50.0%
TCAAATCGAGCACCACCATG+GGG + chr8_1:45539004-45539023 None:intergenic 50.0%
CTCAAATCGAGCACCACCAT+GGG + chr8_1:45539005-45539024 None:intergenic 50.0%
TCTCAAATCGAGCACCACCA+TGG + chr8_1:45539006-45539025 None:intergenic 50.0%
! TGGTGGTGCTCGATTTGAGA+TGG - chr8_1:45539006-45539025 Msa1196440:intron 50.0%
TGGTCTCATTCCTTTGTGGC+GGG - chr8_1:45539026-45539045 Msa1196440:intron 50.0%
CAACGCCAACAGATGCTACA+AGG + chr8_1:45539123-45539142 None:intergenic 50.0%
ATATCACGGAGAGAACGAGG+AGG + chr8_1:45539171-45539190 None:intergenic 50.0%
CATCTTTAGGTGGACAGTGG+AGG - chr8_1:45539193-45539212 Msa1196440:intron 50.0%
TCTTTAGGTGGACAGTGGAG+GGG - chr8_1:45539195-45539214 Msa1196440:intron 50.0%
GGACGGCATCTATTACTACG+AGG - chr8_1:45539216-45539235 Msa1196440:intron 50.0%
! GGTTGATGTATCCCTACGGA+TGG - chr8_1:45539342-45539361 Msa1196440:intron 50.0%
!! AGTAGCAGTCGTTGGTGTCA+TGG - chr8_1:45539606-45539625 Msa1196440:intron 50.0%
!! GGCTTGGCGGATTCTTTCAA+TGG - chr8_1:45539651-45539670 Msa1196440:intron 50.0%
AACACAGAGTGTAAGGAGGC+GGG + chr8_1:45539693-45539712 None:intergenic 50.0%
CAACACAGAGTGTAAGGAGG+CGG + chr8_1:45539694-45539713 None:intergenic 50.0%
GTCTCTCGTGGCGAGTTTAA+CGG - chr8_1:45539732-45539751 Msa1196440:intron 50.0%
GCAAATTCAAGGAAGAGCCG+GGG + chr8_1:45539941-45539960 None:intergenic 50.0%
CCACGACGACTGCAAATTCA+AGG + chr8_1:45539952-45539971 None:intergenic 50.0%
CCTTGAATTTGCAGTCGTCG+TGG - chr8_1:45539949-45539968 Msa1196440:intron 50.0%
ACAGAAGCAGCCAAAGACCA+TGG + chr8_1:45540105-45540124 None:intergenic 50.0%
GCTTCTGTCTCGCAGTAAAG+TGG - chr8_1:45540117-45540136 Msa1196440:intron 50.0%
!! CATGACTTGGTTCAAGGGTG+TGG + chr8_1:45540192-45540211 None:intergenic 50.0%
!! GCCGTCATGACTTGGTTCAA+GGG + chr8_1:45540197-45540216 None:intergenic 50.0%
! ATTTTACCACGCCTGGTACC+TGG - chr8_1:45540246-45540265 Msa1196440:intron 50.0%
CTTGATTACCACCAGGTACC+AGG + chr8_1:45540260-45540279 None:intergenic 50.0%
CTGGTACCTGGTGGTAATCA+AGG - chr8_1:45540258-45540277 Msa1196440:intron 50.0%
AAGTGTTCCACGTGTTCGTC+CGG - chr8_1:45540290-45540309 Msa1196440:intron 50.0%
CCGTCATAGGTCTCCAACTT+TGG - chr8_1:45540323-45540342 Msa1196440:intron 50.0%
TTTCGCAAAGCCGCCAAAGT+TGG + chr8_1:45540339-45540358 None:intergenic 50.0%
GTCCTTTGCGACAGCTTCTA+TGG - chr8_1:45540399-45540418 Msa1196440:intron 50.0%
GACCATAGAAGCTGTCGCAA+AGG + chr8_1:45540404-45540423 None:intergenic 50.0%
! TTTTCCCATCGTTCTCGTCG+CGG + chr8_1:45540509-45540528 None:intergenic 50.0%
CGACGAGAACGATGGGAAAA+CGG - chr8_1:45540509-45540528 Msa1196440:intron 50.0%
TCCCCCATCCAAATCATTGG+GGG - chr8_1:45540541-45540560 Msa1196440:intron 50.0%
! AGCCCCCAATGATTTGGATG+GGG + chr8_1:45540546-45540565 None:intergenic 50.0%
CCGATGAACCGTCTAAAAGG+CGG + chr8_1:45540575-45540594 None:intergenic 50.0%
! CCGCCTTTTAGACGGTTCAT+CGG - chr8_1:45540572-45540591 Msa1196440:intron 50.0%
! CGCCTTTTAGACGGTTCATC+GGG - chr8_1:45540573-45540592 Msa1196440:intron 50.0%
AGTCGCCACACAAATCGAAG+AGG + chr8_1:45540654-45540673 None:intergenic 50.0%
TTGTTCATCTTCTGTGGCGG+AGG - chr8_1:45540761-45540780 Msa1196440:intron 50.0%
! TGTTCATCTTCTGTGGCGGA+GGG - chr8_1:45540762-45540781 Msa1196440:intron 50.0%
ATGACGCAATCCTCGACACT+AGG + chr8_1:45540886-45540905 None:intergenic 50.0%
!! AACGGTACCGATTCTCGAAC+TGG + chr8_1:45540924-45540943 None:intergenic 50.0%
! TCGGTACCGTTCGATTTTGG+AGG - chr8_1:45540933-45540952 Msa1196440:intron 50.0%
CTGGCCATTACTTCGGAGAA+AGG - chr8_1:45541022-45541041 Msa1196440:intron 50.0%
CGCTCCTTTCTCCGAAGTAA+TGG + chr8_1:45541029-45541048 None:intergenic 50.0%
GCGGTAACTGCCAACAGTTA+TGG - chr8_1:45541046-45541065 Msa1196440:intron 50.0%
ACTGCCAACAGTTATGGTGG+AGG - chr8_1:45541052-45541071 Msa1196440:intron 50.0%
CGTTCCTCCACCATAACTGT+TGG + chr8_1:45541059-45541078 None:intergenic 50.0%
ACATAGAACGGTTACGGTGG+AGG - chr8_1:45541114-45541133 Msa1196440:intron 50.0%
TGCCACTCATCCATTCTCAC+CGG + chr8_1:45541198-45541217 None:intergenic 50.0%
GAATGGATGAGTGGCAACGT+TGG - chr8_1:45541202-45541221 Msa1196440:intron 50.0%
ATGGATGAGTGGCAACGTTG+GGG - chr8_1:45541204-45541223 Msa1196440:intron 50.0%
AACGTTGGGGGATAATGCTC+TGG - chr8_1:45541217-45541236 Msa1196440:intron 50.0%
GGGATAATGCTCTGGTGTGT+CGG - chr8_1:45541225-45541244 Msa1196440:intron 50.0%
AAGACCCAACATCGCCATAC+CGG + chr8_1:45541260-45541279 None:intergenic 50.0%
ACCCTTATATAGGCGCGCAT+TGG - chr8_1:45541406-45541425 Msa1196440:intron 50.0%
GTCCAATGCGCGCCTATATA+AGG + chr8_1:45541411-45541430 None:intergenic 50.0%
ATGCAGCGTGTGATTAGGGA+CGG - chr8_1:45541448-45541467 Msa1196440:intron 50.0%
GACGGTAGAAAGACACGTGT+AGG - chr8_1:45541466-45541485 Msa1196440:intron 50.0%
CATCCAAAACAGCCCAAGAG+TGG + chr8_1:45541917-45541936 None:intergenic 50.0%
GAGAACCTACACAGTGCTCA+GGG + chr8_1:45542028-45542047 None:intergenic 50.0%
TGAGAACCTACACAGTGCTC+AGG + chr8_1:45542029-45542048 None:intergenic 50.0%
ATGCAGCTAGCAAGGGCTCT+TGG - chr8_1:45532778-45532797 Msa1196440:intron 55.0%
AAGGGTTGGGTCTTGGACTC+TGG - chr8_1:45533718-45533737 Msa1196440:intron 55.0%
AGGGTTGGGTCTTGGACTCT+GGG - chr8_1:45533719-45533738 Msa1196440:intron 55.0%
GAAGGTGGAGTTGTTCGCCT+TGG - chr8_1:45533796-45533815 Msa1196440:intron 55.0%
ACACCTCACACGCTCCAACA+AGG + chr8_1:45534623-45534642 None:intergenic 55.0%
CTCCCACTCCAAACCTCCAT+AGG + chr8_1:45534751-45534770 None:intergenic 55.0%
CTGTGGAAGATGGAACCTGG+AGG - chr8_1:45534901-45534920 Msa1196440:intron 55.0%
GGGGATGAAGTGCAAAGACC+TGG - chr8_1:45534972-45534991 Msa1196440:intron 55.0%
CCTCCCCTTCCTTTCATCAG+TGG + chr8_1:45535049-45535068 None:intergenic 55.0%
CCACTGATGAAAGGAAGGGG+AGG - chr8_1:45535046-45535065 Msa1196440:intron 55.0%
GTCCAAGGCAGTGGTATCGT+CGG - chr8_1:45535699-45535718 Msa1196440:intron 55.0%
AACCGACGATACCACTGCCT+TGG + chr8_1:45535704-45535723 None:intergenic 55.0%
!! GAGGGTACTCCCTATGCAAG+TGG - chr8_1:45536119-45536138 Msa1196440:intron 55.0%
GGGTACTCCCTATGCAAGTG+GGG - chr8_1:45536121-45536140 Msa1196440:intron 55.0%
ACTCCCTATGCAAGTGGGGT+TGG - chr8_1:45536125-45536144 Msa1196440:intron 55.0%
GCTTCCAACCCCACTTGCAT+AGG + chr8_1:45536132-45536151 None:intergenic 55.0%
CAAATCCGGGTCAAGTGCAC+TGG - chr8_1:45536222-45536241 Msa1196440:intron 55.0%
ACCAGGAAGGGATGCTTTGG+AGG - chr8_1:45536316-45536335 Msa1196440:intron 55.0%
! CCAGGAAGGGATGCTTTGGA+GGG - chr8_1:45536317-45536336 Msa1196440:intron 55.0%
AGCCCTTGTTGAAGGGGTCA+AGG - chr8_1:45536484-45536503 Msa1196440:intron 55.0%
!!! GCGCCGATTTTGACAGTTCC+AGG + chr8_1:45536906-45536925 None:intergenic 55.0%
AGTCTCTTGGTCACGGGAAG+AGG - chr8_1:45537263-45537282 Msa1196440:intron 55.0%
CTGGGACTGAGGGTAGAGTT+AGG - chr8_1:45537286-45537305 Msa1196440:intron 55.0%
CGGTCAACCAAACGACCACT+AGG + chr8_1:45538568-45538587 None:intergenic 55.0%
GTTCGCGTTGTATCTCCCCA+TGG - chr8_1:45538986-45539005 Msa1196440:intron 55.0%
! GAGAGTCGACTTCAGCAGAG+AGG - chr8_1:45539076-45539095 Msa1196440:intron 55.0%
! AGTCGACTTCAGCAGAGAGG+CGG - chr8_1:45539079-45539098 Msa1196440:intron 55.0%
GATGTATCCCTACGGATGGG+TGG - chr8_1:45539346-45539365 Msa1196440:intron 55.0%
CCAACGACTGCTACTAGCTC+AGG + chr8_1:45539601-45539620 None:intergenic 55.0%
CCTGAGCTAGTAGCAGTCGT+TGG - chr8_1:45539598-45539617 Msa1196440:intron 55.0%
! TGTCATGGCCGTGGCATTGA+TGG - chr8_1:45539621-45539640 Msa1196440:intron 55.0%
!! GGCCGTGGCATTGATGGAAA+CGG - chr8_1:45539627-45539646 Msa1196440:intron 55.0%
CGCCGTTTCCATCAATGCCA+CGG + chr8_1:45539632-45539651 None:intergenic 55.0%
!! CGTGGCATTGATGGAAACGG+CGG - chr8_1:45539630-45539649 Msa1196440:intron 55.0%
CATTGATGGAAACGGCGGCT+TGG - chr8_1:45539635-45539654 Msa1196440:intron 55.0%
TCGTGAAGGATCGTCTCTCG+TGG - chr8_1:45539720-45539739 Msa1196440:intron 55.0%
ATGGTTGCACGCGGGTAAAC+AGG - chr8_1:45539889-45539908 Msa1196440:intron 55.0%
GTCGAGCGCTTCACTATAGC+GGG + chr8_1:45540032-45540051 None:intergenic 55.0%
CGTCGAGCGCTTCACTATAG+CGG + chr8_1:45540033-45540052 None:intergenic 55.0%
AGCGCTCGACGTACTCTCTT+AGG - chr8_1:45540042-45540061 Msa1196440:intron 55.0%
GCGCTCGACGTACTCTCTTA+GGG - chr8_1:45540043-45540062 Msa1196440:intron 55.0%
TTCAACGCCGCCATGGTCTT+TGG - chr8_1:45540092-45540111 Msa1196440:intron 55.0%
GAAGCAGCCAAAGACCATGG+CGG + chr8_1:45540102-45540121 None:intergenic 55.0%
!! CGCCGTCATGACTTGGTTCA+AGG + chr8_1:45540198-45540217 None:intergenic 55.0%
!! TGAAAGGCGCCGTCATGACT+TGG + chr8_1:45540205-45540224 None:intergenic 55.0%
AGTGTTCCACGTGTTCGTCC+GGG - chr8_1:45540291-45540310 Msa1196440:intron 55.0%
TGGCGGCTTTGCGAAAATGC+AGG - chr8_1:45540343-45540362 Msa1196440:intron 55.0%
GGCGGCTTTGCGAAAATGCA+GGG - chr8_1:45540344-45540363 Msa1196440:intron 55.0%
GCGGCTTTGCGAAAATGCAG+GGG - chr8_1:45540345-45540364 Msa1196440:intron 55.0%
GTCGCAAAGGACCTTTCACC+AGG + chr8_1:45540391-45540410 None:intergenic 55.0%
CAGCTTCTATGGTCGCGTTC+CGG - chr8_1:45540410-45540429 Msa1196440:intron 55.0%
GAGGGAAGGGGATTACTCTC+CGG + chr8_1:45540432-45540451 None:intergenic 55.0%
AGTAATCCCCTTCCCTCCGA+CGG - chr8_1:45540435-45540454 Msa1196440:intron 55.0%
TTCCTCCACACCAAGACCGT+CGG + chr8_1:45540454-45540473 None:intergenic 55.0%
CTTACCGCGACGAGAACGAT+GGG - chr8_1:45540502-45540521 Msa1196440:intron 55.0%
! GCCCCCAATGATTTGGATGG+GGG + chr8_1:45540545-45540564 None:intergenic 55.0%
TAGACGGTTCATCGGGATGG+AGG - chr8_1:45540580-45540599 Msa1196440:intron 55.0%
GCAGCGTCATCTACCGCTAA+CGG - chr8_1:45540602-45540621 Msa1196440:intron 55.0%
! GTTCATCTTCTGTGGCGGAG+GGG - chr8_1:45540763-45540782 Msa1196440:intron 55.0%
GTCCGGTGAGAATGGATGAG+TGG - chr8_1:45541193-45541212 Msa1196440:intron 55.0%
TGGATGAGTGGCAACGTTGG+GGG - chr8_1:45541205-45541224 Msa1196440:intron 55.0%
! GGTGTGTCGGTAACAGCTTC+CGG - chr8_1:45541238-45541257 Msa1196440:intron 55.0%
GTCGGTAACAGCTTCCGGTA+TGG - chr8_1:45541243-45541262 Msa1196440:intron 55.0%
AGCTTCCGGTATGGCGATGT+TGG - chr8_1:45541252-45541271 Msa1196440:intron 55.0%
GCTTCCGGTATGGCGATGTT+GGG - chr8_1:45541253-45541272 Msa1196440:intron 55.0%
ATGGCGATGTTGGGTCTTCG+CGG - chr8_1:45541262-45541281 Msa1196440:intron 55.0%
TGTAGGGTGAACCTCGCGTA+GGG - chr8_1:45541483-45541502 Msa1196440:intron 55.0%
TCTTAAGGCTCCGCGCATGA+GGG + chr8_1:45541550-45541569 None:intergenic 55.0%
TCATGCGCGGAGCCTTAAGA+CGG - chr8_1:45541550-45541569 Msa1196440:intron 55.0%
CAGTGCTCAGGGTCTACAGA+AGG + chr8_1:45542017-45542036 None:intergenic 55.0%
! GTAGACCCTGAGCACTGTGT+AGG - chr8_1:45542020-45542039 Msa1196440:CDS 55.0%
GGACCTTGTTGGAGCGTGTG+AGG - chr8_1:45534617-45534636 Msa1196440:intron 60.0%
! GGAGGTTTGGAGTGGGAGAC+CGG - chr8_1:45534753-45534772 Msa1196440:intron 60.0%
! TACCAGGGGTCGAAGCACCA+AGG - chr8_1:45535405-45535424 Msa1196440:intron 60.0%
!! TACCTTGGTGCTTCGACCCC+TGG + chr8_1:45535410-45535429 None:intergenic 60.0%
GCTTGCCAGTGCACTTGACC+CGG + chr8_1:45536230-45536249 None:intergenic 60.0%
! CCCTCCAAAGCATCCCTTCC+TGG + chr8_1:45536320-45536339 None:intergenic 60.0%
GCGCCCGAACACTGTGCAAT+CGG - chr8_1:45536922-45536941 Msa1196440:intron 60.0%
CGCCCGAACACTGTGCAATC+GGG - chr8_1:45536923-45536942 Msa1196440:intron 60.0%
GCCCGAACACTGTGCAATCG+GGG - chr8_1:45536924-45536943 Msa1196440:intron 60.0%
GCCCCGATTGCACAGTGTTC+GGG + chr8_1:45536928-45536947 None:intergenic 60.0%
GGCCCCGATTGCACAGTGTT+CGG + chr8_1:45536929-45536948 None:intergenic 60.0%
! TGGGCCGGTTCTGTTCCGTT+TGG - chr8_1:45537061-45537080 Msa1196440:intron 60.0%
TCTTGGTCACGGGAAGAGGC+TGG - chr8_1:45537267-45537286 Msa1196440:intron 60.0%
CTTGGTCACGGGAAGAGGCT+GGG - chr8_1:45537268-45537287 Msa1196440:intron 60.0%
TGAATGGGCAGACGGTGTGC+AGG - chr8_1:45538602-45538621 Msa1196440:intron 60.0%
CGCGTTGTATCTCCCCATGG+TGG - chr8_1:45538989-45539008 Msa1196440:intron 60.0%
TCACGGAGAGAACGAGGAGG+TGG + chr8_1:45539168-45539187 None:intergenic 60.0%
TAGGTGGACAGTGGAGGGGA+CGG - chr8_1:45539199-45539218 Msa1196440:intron 60.0%
GGGACAACCACCCATCCGTA+GGG + chr8_1:45539356-45539375 None:intergenic 60.0%
TGGGACAACCACCCATCCGT+AGG + chr8_1:45539357-45539376 None:intergenic 60.0%
GGTCGGCGTCTCTCGTGAAA+CGG - chr8_1:45539537-45539556 Msa1196440:intron 60.0%
!! AGTCGTTGGTGTCATGGCCG+TGG - chr8_1:45539612-45539631 Msa1196440:intron 60.0%
! TGATGGAAACGGCGGCTTGG+CGG - chr8_1:45539638-45539657 Msa1196440:intron 60.0%
!! GCGCTTCACTATAGCGGGTG+AGG + chr8_1:45540027-45540046 None:intergenic 60.0%
GATAGCGTTCAACGCCGCCA+TGG - chr8_1:45540085-45540104 Msa1196440:intron 60.0%
TTACCACGCCTGGTACCTGG+TGG - chr8_1:45540249-45540268 Msa1196440:intron 60.0%
TTACCACCAGGTACCAGGCG+TGG + chr8_1:45540255-45540274 None:intergenic 60.0%
CTATGACGGCACCACGAACC+CGG + chr8_1:45540312-45540331 None:intergenic 60.0%
ACCAAGACCGTCGGAGGGAA+GGG + chr8_1:45540445-45540464 None:intergenic 60.0%
TCCACACCAAGACCGTCGGA+GGG + chr8_1:45540450-45540469 None:intergenic 60.0%
GCTTACCGCGACGAGAACGA+TGG - chr8_1:45540501-45540520 Msa1196440:intron 60.0%
GGTGGCTCTCCTACGAGTTC+TGG - chr8_1:45541003-45541022 Msa1196440:intron 60.0%
GGTGGAGGATCGTTAGACCG+TGG - chr8_1:45541129-45541148 Msa1196440:intron 60.0%
GGAGGATCGTTAGACCGTGG+CGG - chr8_1:45541132-45541151 Msa1196440:intron 60.0%
GGATCGTTCGCTAACCGCCA+CGG + chr8_1:45541149-45541168 None:intergenic 60.0%
GGTCTTCGCGGTGGAACGAA+AGG - chr8_1:45541274-45541293 Msa1196440:intron 60.0%
GTGTAGGGTGAACCTCGCGT+AGG - chr8_1:45541482-45541501 Msa1196440:intron 60.0%
GTAGGGTGAACCTCGCGTAG+GGG - chr8_1:45541484-45541503 Msa1196440:intron 60.0%
CTGGCATGTTCCCTCATGCG+CGG - chr8_1:45541537-45541556 Msa1196440:intron 60.0%
GTCTTAAGGCTCCGCGCATG+AGG + chr8_1:45541551-45541570 None:intergenic 60.0%
ACGGGAAGAGGCTGGGACTG+AGG - chr8_1:45537275-45537294 Msa1196440:intron 65.0%
CGGGAAGAGGCTGGGACTGA+GGG - chr8_1:45537276-45537295 Msa1196440:intron 65.0%
GCTGCTCTCTCCCCCAGAGT+AGG - chr8_1:45537381-45537400 Msa1196440:intron 65.0%
TCTTTGGCCGCCTGAAGCCC+CGG - chr8_1:45539921-45539940 Msa1196440:intron 65.0%
CAAGGAAGAGCCGGGGCTTC+AGG + chr8_1:45539934-45539953 None:intergenic 65.0%
CACGAACCCGGACGAACACG+TGG + chr8_1:45540300-45540319 None:intergenic 65.0%
CACGTGTTCGTCCGGGTTCG+TGG - chr8_1:45540298-45540317 Msa1196440:intron 65.0%
!! CGGGTTCGTGGTGCCGTCAT+AGG - chr8_1:45540310-45540329 Msa1196440:intron 65.0%
CCAAGACCGTCGGAGGGAAG+GGG + chr8_1:45540444-45540463 None:intergenic 65.0%
CACCAAGACCGTCGGAGGGA+AGG + chr8_1:45540446-45540465 None:intergenic 65.0%
TCCCTCCGACGGTCTTGGTG+TGG - chr8_1:45540446-45540465 Msa1196440:intron 65.0%
CTCCACACCAAGACCGTCGG+AGG + chr8_1:45540451-45540470 None:intergenic 65.0%
! CTCCGACGGTCTTGGTGTGG+AGG - chr8_1:45540449-45540468 Msa1196440:intron 65.0%
CAGATGGCGCTCCTCCGTCT+CGG + chr8_1:45540802-45540821 None:intergenic 65.0%
CCATCTGTGCGCGAAGGAGG+CGG - chr8_1:45540815-45540834 Msa1196440:intron 65.0%
CGCAGGACGTGACTCTTGCG+CGG - chr8_1:45540964-45540983 Msa1196440:intron 65.0%
AGGACGTGACTCTTGCGCGG+TGG - chr8_1:45540967-45540986 Msa1196440:intron 65.0%
ACGTGACTCTTGCGCGGTGG+AGG - chr8_1:45540970-45540989 Msa1196440:intron 65.0%
ACTCTTGCGCGGTGGAGGAG+CGG - chr8_1:45540975-45540994 Msa1196440:intron 65.0%
GCGATGTTGGGTCTTCGCGG+TGG - chr8_1:45541265-45541284 Msa1196440:intron 65.0%
TGGGCGGACACCCGCCACAA+AGG + chr8_1:45539039-45539058 None:intergenic 70.0%
!! TGTGGCGGGTGTCCGCCCAT+TGG - chr8_1:45539040-45539059 Msa1196440:intron 70.0%
GGAAGAGCCGGGGCTTCAGG+CGG + chr8_1:45539931-45539950 None:intergenic 70.0%
CCCCTTCCCTCCGACGGTCT+TGG - chr8_1:45540441-45540460 Msa1196440:intron 70.0%
! TTCTGTGGCGGAGGGGCCAG+AGG - chr8_1:45540770-45540789 Msa1196440:intron 70.0%
GCCAGAGGAGACGGCCGAGA+CGG - chr8_1:45540785-45540804 Msa1196440:intron 70.0%
TCCGTCTCGGCCGTCTCCTC+TGG + chr8_1:45540789-45540808 None:intergenic 70.0%
AGAGGAGACGGCCGAGACGG+AGG - chr8_1:45540788-45540807 Msa1196440:intron 70.0%
! GGAGCGCCATCTGTGCGCGA+AGG - chr8_1:45540809-45540828 Msa1196440:intron 70.0%
GCGCCATCTGTGCGCGAAGG+AGG - chr8_1:45540812-45540831 Msa1196440:intron 70.0%
CCGCCTCCTTCGCGCACAGA+TGG + chr8_1:45540818-45540837 None:intergenic 70.0%
TCTGTGCGCGAAGGAGGCGG+AGG - chr8_1:45540818-45540837 Msa1196440:intron 70.0%
TGCGCGAAGGAGGCGGAGGA+AGG - chr8_1:45540822-45540841 Msa1196440:intron 70.0%
GGTGGAGGAGCGGCTTGTGG+TGG - chr8_1:45540985-45541004 Msa1196440:intron 70.0%
! CGTAGGGGCACGCTTCCGTG+TGG - chr8_1:45541499-45541518 Msa1196440:intron 70.0%
GGCGGAGGGGCCAGAGGAGA+CGG - chr8_1:45540776-45540795 Msa1196440:intron 75.0%
CGCGGTGGAGGAGCGGCTTG+TGG - chr8_1:45540982-45541001 Msa1196440:intron 75.0%
! CGGAAGCGTGCCCCTACGCG+AGG + chr8_1:45541497-45541516 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 45532613 45542052 45532613 ID=Msa1196440;Name=Msa1196440
chr8_1 mRNA 45532613 45542052 45532613 ID=Msa1196440-mRNA-1;Parent=Msa1196440;Name=Msa1196440-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|0.5|1|1|2|0|108
chr8_1 exon 45541783 45542052 45541783 ID=Msa1196440-mRNA-1:exon:14593;Parent=Msa1196440-mRNA-1
chr8_1 exon 45532613 45532669 45532613 ID=Msa1196440-mRNA-1:exon:14592;Parent=Msa1196440-mRNA-1
chr8_1 CDS 45541783 45542052 45541783 ID=Msa1196440-mRNA-1:cds;Parent=Msa1196440-mRNA-1
chr8_1 CDS 45532613 45532669 45532613 ID=Msa1196440-mRNA-1:cds;Parent=Msa1196440-mRNA-1
Gene Sequence

>Msa1196440

ATGTCATTTTCAGGGATAGAACTTGGAGAAGAAGCTAATGTCGAGGAAGAATTATCCGATGATGGATCGCAGTTAGGGGAGAAGAAGAGAAGGCTTAACATGGAACAAGTGAAGACACTTGAGAAGAGTTTTGAGTTAGGAAACAAGCTTGAACCTGAGAGGAAAATGCAGCTAGCAAGGGCTCTTGGATTGCAACCAAGACAGATTGCTATATGGTTTCAAAACAGAAGGGCTAGGTGGAAGACAAAACAGTTGGAGAAAGACTATGATTCTGCGCAATGCACACTTCCTTCTGTAGACCCTGAGCACTGTGTAGGTTCTCAATGA

Protein sequence

>Msa1196440

MSFSGIELGEEANVEEELSDDGSQLGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDSAQCTLPSVDPEHCVGSQ*