Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155210 | XP_003623847.1 | 97.390 | 613 | 15 | 1 | 1 | 613 | 1 | 612 | 0.0 | 1238 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155210 | sp|Q9LPD2|GENL1_ARATH | 54.160 | 613 | 265 | 7 | 1 | 612 | 1 | 598 | 0.0 | 645 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155210 | A2Q3P8 | 97.390 | 613 | 15 | 1 | 1 | 613 | 1 | 612 | 0.0 | 1238 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005890 | Msa1155210 | 0.809103 | 2.232210e-50 | -8.615850e-47 |
Msa0028420 | Msa1155210 | 0.808629 | 2.820018e-50 | -8.615850e-47 |
Msa0036870 | Msa1155210 | 0.824484 | 7.874822e-54 | -8.615850e-47 |
Msa0052260 | Msa1155210 | 0.814262 | 1.684962e-51 | -8.615850e-47 |
Msa0090400 | Msa1155210 | 0.824326 | 8.576885e-54 | -8.615850e-47 |
Msa0795870 | Msa1155210 | 0.808775 | 2.624532e-50 | -8.615850e-47 |
Msa0833650 | Msa1155210 | 0.813042 | 3.127393e-51 | -8.615850e-47 |
Msa0137880 | Msa1155210 | 0.815308 | 9.881374e-52 | -8.615850e-47 |
Msa0190570 | Msa1155210 | 0.811031 | 8.578143e-51 | -8.615850e-47 |
Msa0225860 | Msa1155210 | 0.827617 | 1.416981e-54 | -8.615850e-47 |
Msa0419700 | Msa1155210 | 0.805702 | 1.174963e-49 | -8.615850e-47 |
Msa1066220 | Msa1155210 | 0.833612 | 4.825880e-56 | -8.615850e-47 |
Msa1076510 | Msa1155210 | 0.804124 | 2.510893e-49 | -8.615850e-47 |
Msa0242590 | Msa1155210 | 0.807835 | 4.162028e-50 | -8.615850e-47 |
Msa0267110 | Msa1155210 | 0.802011 | 6.867636e-49 | -8.615850e-47 |
Msa1119940 | Msa1155210 | 0.820116 | 8.127487e-53 | -8.615850e-47 |
Msa1132840 | Msa1155210 | 0.825041 | 5.817224e-54 | -8.615850e-47 |
Msa1155210 | Msa1321340 | 0.803560 | 3.288411e-49 | -8.615850e-47 |
Msa1155210 | Msa1343180 | 0.806627 | 7.504381e-50 | -8.615850e-47 |
Msa1155210 | Msa1397400 | 0.805816 | 1.111802e-49 | -8.615850e-47 |
Msa1155210 | Msa1454140 | 0.809764 | 1.610420e-50 | -8.615850e-47 |
Msa0580370 | Msa1155210 | 0.821383 | 4.158178e-53 | -8.615850e-47 |
Msa0945110 | Msa1155210 | 0.809379 | 1.947951e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155210 | MtrunA17_Chr7g0246801 | 97.390 | 613 | 15 | 1 | 1 | 613 | 1 | 612 | 0.0 | 1238 |
Msa1155210 | MtrunA17_Chr6g0470821 | 36.220 | 254 | 153 | 6 | 1 | 249 | 1 | 250 | 5.27e-34 | 136 |
Msa1155210 | MtrunA17_Chr7g0228021 | 45.161 | 124 | 66 | 2 | 117 | 240 | 1026 | 1147 | 7.73e-22 | 100 |
Msa1155210 | MtrunA17_Chr1g0193411 | 31.095 | 283 | 160 | 15 | 1 | 257 | 1 | 274 | 7.17e-17 | 82.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1155210 | AT1G01880.3 | 54.160 | 613 | 265 | 7 | 1 | 612 | 1 | 598 | 0.0 | 645 |
Msa1155210 | AT1G01880.1 | 54.160 | 613 | 265 | 7 | 1 | 612 | 1 | 598 | 0.0 | 645 |
Msa1155210 | AT1G01880.2 | 53.997 | 613 | 265 | 8 | 1 | 612 | 1 | 597 | 0.0 | 638 |
Msa1155210 | AT1G01880.4 | 51.002 | 549 | 253 | 7 | 65 | 612 | 7 | 540 | 0.0 | 530 |
Msa1155210 | AT3G48900.2 | 35.294 | 255 | 150 | 7 | 1 | 247 | 1 | 248 | 2.51e-31 | 129 |
Msa1155210 | AT3G28030.2 | 27.410 | 332 | 198 | 8 | 83 | 414 | 889 | 1177 | 9.63e-24 | 107 |
Msa1155210 | AT3G28030.4 | 27.410 | 332 | 198 | 8 | 83 | 414 | 697 | 985 | 1.06e-23 | 107 |
Msa1155210 | AT3G28030.1 | 27.410 | 332 | 198 | 8 | 83 | 414 | 889 | 1177 | 1.28e-23 | 107 |
Msa1155210 | AT3G28030.3 | 25.758 | 396 | 232 | 10 | 83 | 478 | 915 | 1248 | 1.53e-23 | 106 |
Msa1155210 | AT3G48900.3 | 39.726 | 146 | 87 | 1 | 102 | 247 | 40 | 184 | 1.95e-21 | 99.0 |
Msa1155210 | AT3G48900.1 | 39.726 | 146 | 87 | 1 | 102 | 247 | 40 | 184 | 2.02e-21 | 98.6 |
Msa1155210 | AT5G26680.2 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 1.06e-17 | 85.9 |
Msa1155210 | AT5G26680.5 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 3.20e-17 | 84.7 |
Msa1155210 | AT5G26680.4 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 3.20e-17 | 84.7 |
Msa1155210 | AT5G26680.3 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 3.20e-17 | 84.7 |
Msa1155210 | AT5G26680.1 | 27.397 | 292 | 171 | 10 | 16 | 272 | 19 | 304 | 3.53e-17 | 85.1 |
Find 137 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGACCTTCACTATTTAAT+TGG | 0.053466 | 7_4:+43078197 | None:intergenic |
ATTTCATCCTTTGGAAAATT+TGG | 0.099249 | 7_4:+43076489 | None:intergenic |
GACAGTGATGCATTCCTCTT+TGG | 0.175216 | 7_4:-43078154 | Msa1155210:CDS |
CCAACCGATAGTTTGCTATT+TGG | 0.175622 | 7_4:-43076147 | Msa1155210:CDS |
AGGCGACGCCTAACAGATTT+TGG | 0.191704 | 7_4:+43075357 | None:intergenic |
GTCATGAACACAAAATTAAA+AGG | 0.198863 | 7_4:+43075214 | None:intergenic |
TGGGTGTTGGTGGTAATTTC+TGG | 0.201430 | 7_4:-43079899 | Msa1155210:CDS |
GATGACTCTTCTCCATGTTT+TGG | 0.212072 | 7_4:+43075453 | None:intergenic |
TTTGTAGTTTGGAGCGTTTC+CGG | 0.219279 | 7_4:-43078703 | Msa1155210:intron |
TTTCTGCTTAATCACGATAA+TGG | 0.227941 | 7_4:+43079939 | None:intergenic |
CCTAATAGCTATCTCTCTTT+TGG | 0.274761 | 7_4:-43077383 | Msa1155210:CDS |
ATCCATCTTCTTCACAAATC+TGG | 0.278684 | 7_4:+43075935 | None:intergenic |
CAACCGATAGTTTGCTATTT+GGG | 0.292855 | 7_4:-43076146 | Msa1155210:CDS |
CATTAAAGCTGAGGAAAATA+TGG | 0.298254 | 7_4:-43076932 | Msa1155210:CDS |
TTGCTATTGATTTATCGTTT+TGG | 0.299838 | 7_4:-43079818 | Msa1155210:CDS |
ACAGTGATGCATTCCTCTTT+GGG | 0.302361 | 7_4:-43078153 | Msa1155210:CDS |
GGACTTGACGATTTCCTCTT+TGG | 0.304845 | 7_4:+43075387 | None:intergenic |
CTCATGGGAAAGACCGAATA+TGG | 0.314813 | 7_4:-43076280 | Msa1155210:CDS |
ACGGTCACTTACTTTGGAAT+TGG | 0.315064 | 7_4:+43078102 | None:intergenic |
CTGCTCATTCTGTGGGCATC+CGG | 0.316217 | 7_4:-43076872 | Msa1155210:CDS |
TTCTGCTTAATCACGATAAT+GGG | 0.323889 | 7_4:+43079940 | None:intergenic |
AAAACCTTCATTGCGTGAAT+AGG | 0.329105 | 7_4:+43079863 | None:intergenic |
TTTCCGGTGTTCGTTGTTGA+TGG | 0.330529 | 7_4:-43078687 | Msa1155210:CDS |
TGCATGCCAGATTTATTTGC+CGG | 0.335933 | 7_4:+43076021 | None:intergenic |
ATGAAAATATGGACCTTGTT+GGG | 0.338687 | 7_4:-43075894 | Msa1155210:CDS |
AAACCTTCATTGCGTGAATA+GGG | 0.344866 | 7_4:+43079864 | None:intergenic |
TCTGTTGACAGATGAAAATA+TGG | 0.352773 | 7_4:-43075905 | Msa1155210:CDS |
CAAGCTAGTCGACTCAATTC+CGG | 0.360228 | 7_4:+43078611 | None:intergenic |
AGAACTCTGTAATATTTAAC+TGG | 0.360267 | 7_4:+43075502 | None:intergenic |
CCAAAAGAGAGATAGCTATT+AGG | 0.366111 | 7_4:+43077383 | None:intergenic |
ATATCAATGATTTCATCCTT+TGG | 0.375355 | 7_4:+43076480 | None:intergenic |
CGGTCACTTACTTTGGAATT+GGG | 0.384232 | 7_4:+43078103 | None:intergenic |
GGGTGTTGGTGGTAATTTCT+GGG | 0.384908 | 7_4:-43079898 | Msa1155210:CDS |
CTTGACATCAAATTTATAAG+AGG | 0.386394 | 7_4:-43075110 | Msa1155210:three_prime_UTR |
AATTGAGTCGACTAGCTTGC+CGG | 0.386864 | 7_4:-43078607 | Msa1155210:CDS |
AGGTTTCGTATGTTACTGTT+AGG | 0.388087 | 7_4:+43080014 | None:intergenic |
ATGACCTTCACTATTTAATT+GGG | 0.390559 | 7_4:+43078198 | None:intergenic |
ATGTGTAGTTAACAATAGTT+TGG | 0.396151 | 7_4:-43075168 | Msa1155210:three_prime_UTR |
CTGAGGTGAGGTTTCTTGAC+AGG | 0.400391 | 7_4:+43079765 | None:intergenic |
AAAACTCCGGCAAATAAATC+TGG | 0.403594 | 7_4:-43076027 | Msa1155210:CDS |
AAGACCGAATATGGACCTTC+TGG | 0.404898 | 7_4:-43076271 | Msa1155210:CDS |
GTGAAGATGATATATTGAAT+AGG | 0.410092 | 7_4:-43077285 | Msa1155210:intron |
AAGAAGATGGTTGACATCAT+AGG | 0.410471 | 7_4:+43076189 | None:intergenic |
TCAGATATTGAAGCTGGGCT+TGG | 0.410473 | 7_4:-43077421 | Msa1155210:CDS |
TCCATCTTCTTCACAAATCT+GGG | 0.412006 | 7_4:+43075936 | None:intergenic |
TTTAAATTTGCAGGAATTGA+AGG | 0.414875 | 7_4:-43075604 | Msa1155210:intron |
AACCATCTTCTTGAGAGAAA+TGG | 0.422847 | 7_4:-43076178 | Msa1155210:CDS |
GAAAAGGTTCCGGCAGGAAC+AGG | 0.426754 | 7_4:-43075851 | Msa1155210:intron |
TAGGAACTTGCTAAGCTACT+TGG | 0.427518 | 7_4:-43078265 | Msa1155210:CDS |
TCCTCAGCTTTAATGTCAAT+AGG | 0.430541 | 7_4:+43076940 | None:intergenic |
CAGAAGAAGTGAAAAGGTTC+CGG | 0.431380 | 7_4:-43075861 | Msa1155210:CDS |
CTAATATTCCAAAATCTGTT+AGG | 0.432669 | 7_4:-43075365 | Msa1155210:CDS |
CCCCAGATTTGTGAAGAAGA+TGG | 0.435198 | 7_4:-43075937 | Msa1155210:CDS |
TACGATTTGAGTGGTGTTCA+AGG | 0.445818 | 7_4:-43077349 | Msa1155210:CDS |
TCAACCAGAAGGTCCATATT+CGG | 0.445944 | 7_4:+43076267 | None:intergenic |
GATGAAAATATGGACCTTGT+TGG | 0.449635 | 7_4:-43075895 | Msa1155210:CDS |
TGATTGCAATTCTTGTTGTA+TGG | 0.451072 | 7_4:-43076758 | Msa1155210:intron |
CAATCACATTTAAAACCCTC+TGG | 0.451761 | 7_4:+43076775 | None:intergenic |
GCTGAAGAAGGTGTTTCAGC+TGG | 0.452391 | 7_4:-43078582 | Msa1155210:CDS |
TTCCGGTGTTCGTTGTTGAT+GGG | 0.454954 | 7_4:-43078686 | Msa1155210:CDS |
TTGTGGAACAGACACTGAAC+AGG | 0.459174 | 7_4:+43079994 | None:intergenic |
AATATGTCAGATATTGAAGC+TGG | 0.465572 | 7_4:-43077427 | Msa1155210:CDS |
AGCCATTTCTCTCAAGAAGA+TGG | 0.471480 | 7_4:+43076176 | None:intergenic |
ACTTTGTTTGCAGTGAATGA+TGG | 0.475062 | 7_4:-43076312 | Msa1155210:intron |
GTCAAGTGGAAACGTGCAAT+GGG | 0.475276 | 7_4:-43076063 | Msa1155210:CDS |
TGCTCATTCTGTGGGCATCC+GGG | 0.483415 | 7_4:-43076871 | Msa1155210:CDS |
GACATATTGTAGCATTCAAA+CGG | 0.484489 | 7_4:+43077442 | None:intergenic |
TCTCCTTTAGCCTTCAGTAC+AGG | 0.490882 | 7_4:+43078238 | None:intergenic |
CACACTACTAGTCAAACAAA+AGG | 0.494721 | 7_4:+43075337 | None:intergenic |
AAGCCCTATTCACGCAATGA+AGG | 0.496872 | 7_4:-43079867 | Msa1155210:CDS |
GCCTGTGATTTCAACGGAGA+TGG | 0.497761 | 7_4:+43078660 | None:intergenic |
CAATGCAGATTACATGAGAT+AGG | 0.498331 | 7_4:-43076985 | Msa1155210:intron |
AAGAGGAATGCATCACTGTC+AGG | 0.499239 | 7_4:+43078157 | None:intergenic |
ATATTAACTGAGTGTTGAAA+AGG | 0.499888 | 7_4:-43075248 | Msa1155210:three_prime_UTR |
CTCCGTTGAAATCACAGGCC+AGG | 0.502105 | 7_4:-43078656 | Msa1155210:CDS |
ATGACAGAATAGGAAACATA+AGG | 0.503679 | 7_4:-43076568 | Msa1155210:intron |
GACGATTAATCTCTTCTCAA+AGG | 0.504394 | 7_4:-43079727 | Msa1155210:intron |
GAGGAAAATATGGATATTGA+CGG | 0.504501 | 7_4:-43076922 | Msa1155210:CDS |
AGGAACTTGCTAAGCTACTT+GGG | 0.506203 | 7_4:-43078264 | Msa1155210:CDS |
CACACTGAACTAACTGCCCT+TGG | 0.507097 | 7_4:+43075192 | None:intergenic |
ACTGGGATCCGTCATACATT+CGG | 0.507228 | 7_4:-43076224 | Msa1155210:CDS |
AATTCAATCATGGGTGTTGG+TGG | 0.511542 | 7_4:-43079909 | Msa1155210:exon |
TGAGGTGAGGTTTCTTGACA+GGG | 0.512535 | 7_4:+43079766 | None:intergenic |
AGCTTGCCGGTTGCTGAAGA+AGG | 0.515821 | 7_4:-43078594 | Msa1155210:CDS |
ATTAATTCAATCATGGGTGT+TGG | 0.517628 | 7_4:-43079912 | Msa1155210:exon |
AAATATTGCCTCTAAAACTC+CGG | 0.521848 | 7_4:-43076040 | Msa1155210:CDS |
TGTGTCGCGGATGGCAATGA+AGG | 0.522660 | 7_4:-43076811 | Msa1155210:CDS |
ATGACGGATCCCAGTTCTGA+TGG | 0.524536 | 7_4:+43076232 | None:intergenic |
TCAACATCACCAAACTCAAA+AGG | 0.525832 | 7_4:-43075528 | Msa1155210:CDS |
ATGATGGACCTCAGATCTCA+TGG | 0.526994 | 7_4:-43076296 | Msa1155210:CDS |
GAAACACCTTCTTCAGCAAC+CGG | 0.528035 | 7_4:+43078588 | None:intergenic |
CAAACTCACTGCTCATTCTG+TGG | 0.528123 | 7_4:-43076880 | Msa1155210:CDS |
AAAACGATTAATTCAATCAT+GGG | 0.528695 | 7_4:-43079918 | Msa1155210:exon |
TCGACTCAATTCCGGAAGAC+CGG | 0.531944 | 7_4:+43078619 | None:intergenic |
TTGAGTGGTGTTCAAGGGAT+CGG | 0.533209 | 7_4:-43077343 | Msa1155210:CDS |
TCATGAACACAAAATTAAAA+GGG | 0.536095 | 7_4:+43075215 | None:intergenic |
TCCTATTGACATTAAAGCTG+AGG | 0.538234 | 7_4:-43076941 | Msa1155210:CDS |
CTGAAGAAGGTGTTTCAGCT+GGG | 0.541185 | 7_4:-43078581 | Msa1155210:CDS |
CTTACGCAGAAGAAGTGAAA+AGG | 0.545988 | 7_4:-43075867 | Msa1155210:CDS |
TGTCAAGTGGAAACGTGCAA+TGG | 0.549796 | 7_4:-43076064 | Msa1155210:CDS |
AAACGTGTGAAGACGAGATA+CGG | 0.554447 | 7_4:-43076102 | Msa1155210:CDS |
TAATGCATTTAGCCCCAAAG+AGG | 0.555621 | 7_4:+43078140 | None:intergenic |
TTTAAACTTCCATCAGAACT+GGG | 0.555624 | 7_4:-43076241 | Msa1155210:CDS |
CAGTGATGCATTCCTCTTTG+GGG | 0.562537 | 7_4:-43078152 | Msa1155210:CDS |
TCCATCTCCGTTGAAATCAC+AGG | 0.563135 | 7_4:-43078661 | Msa1155210:CDS |
ATTCCTGTACTGAAGGCTAA+AGG | 0.568014 | 7_4:-43078241 | Msa1155210:CDS |
TAATAAATACCTGTTCCTGC+CGG | 0.568278 | 7_4:+43075842 | None:intergenic |
AGGAAAATATGGATATTGAC+GGG | 0.569377 | 7_4:-43076921 | Msa1155210:CDS |
AAACTCACTGCTCATTCTGT+GGG | 0.570395 | 7_4:-43076879 | Msa1155210:CDS |
ACGATTTGAGTGGTGTTCAA+GGG | 0.573182 | 7_4:-43077348 | Msa1155210:CDS |
AGAAGTGAAAAGGTTCCGGC+AGG | 0.576018 | 7_4:-43075857 | Msa1155210:CDS |
CTGCCCAAATAGCAAACTAT+CGG | 0.576488 | 7_4:+43076143 | None:intergenic |
AGATTACATGAGATAGGCAA+AGG | 0.579994 | 7_4:-43076979 | Msa1155210:CDS |
GATTACATGAGATAGGCAAA+GGG | 0.589882 | 7_4:-43076978 | Msa1155210:CDS |
ACTTGGGATTCCTGTACTGA+AGG | 0.589944 | 7_4:-43078248 | Msa1155210:CDS |
ATAATCCGCCGAATGTATGA+CGG | 0.593450 | 7_4:+43076216 | None:intergenic |
CTGCGTAAGCAGCCCCAACA+AGG | 0.593557 | 7_4:+43075881 | None:intergenic |
TGAAAATATGGACCTTGTTG+GGG | 0.600292 | 7_4:-43075893 | Msa1155210:CDS |
GTCCCATCAACAACGAACAC+CGG | 0.600640 | 7_4:+43078684 | None:intergenic |
CCAAATAGCAAACTATCGGT+TGG | 0.605787 | 7_4:+43076147 | None:intergenic |
GGTCTTTCCCATGAGATCTG+AGG | 0.617897 | 7_4:+43076288 | None:intergenic |
ATATGTCAGATATTGAAGCT+GGG | 0.620721 | 7_4:-43077426 | Msa1155210:CDS |
GGAAATGATTACGATTTGAG+TGG | 0.621724 | 7_4:-43077358 | Msa1155210:CDS |
TGTGCCCAATTAAATAGTGA+AGG | 0.623153 | 7_4:-43078202 | Msa1155210:CDS |
AGTAAACAAAATCCAAAACA+TGG | 0.628201 | 7_4:-43075465 | Msa1155210:CDS |
GAGGTGAGGTTTCTTGACAG+GGG | 0.631952 | 7_4:+43079767 | None:intergenic |
TGATGGACCTCAGATCTCAT+GGG | 0.634706 | 7_4:-43076295 | Msa1155210:CDS |
AAGCTGGGCTTGGATTGAAG+AGG | 0.636947 | 7_4:-43077411 | Msa1155210:CDS |
CCATCTTCTTCACAAATCTG+GGG | 0.640984 | 7_4:+43075937 | None:intergenic |
AATGACAGCCAAGACAGTGG+AGG | 0.663678 | 7_4:-43075417 | Msa1155210:CDS |
AAGAAGGTGTTTCAGCTGGG+AGG | 0.668107 | 7_4:-43078578 | Msa1155210:CDS |
AAGATGTGTTCAAGAGTGTG+TGG | 0.672457 | 7_4:-43078541 | Msa1155210:intron |
GTGGAGGCTCAAAACCAAAG+AGG | 0.681076 | 7_4:-43075401 | Msa1155210:CDS |
ATCCTGGCCTGTGATTTCAA+CGG | 0.687854 | 7_4:+43078654 | None:intergenic |
AATCTGTGACAAGATTGCAA+AGG | 0.695313 | 7_4:-43076514 | Msa1155210:CDS |
GCATGATGTTGATGAAACAG+TGG | 0.705087 | 7_4:-43075983 | Msa1155210:CDS |
ATGTATCTATGCAATGACAA+TGG | 0.712623 | 7_4:-43076459 | Msa1155210:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTCTAATATAATCAAAA+GGG | + | chr7_4:43075537-43075556 | None:intergenic | 10.0% |
!!! | TTTTTTCTAATATAATCAAA+AGG | + | chr7_4:43075538-43075557 | None:intergenic | 10.0% |
!!! | TTTTTTCTTTATAATCAAAA+GGG | + | chr7_4:43075728-43075747 | None:intergenic | 10.0% |
!!! | TTTTTTTCTTTATAATCAAA+AGG | + | chr7_4:43075729-43075748 | None:intergenic | 10.0% |
!!! | ATTTTTATTTTTTTGTAGTT+TGG | - | chr7_4:43076451-43076470 | Msa1155210:CDS | 10.0% |
!!! | ATGTTTTTTTACTATATTTT+TGG | - | chr7_4:43078509-43078528 | Msa1155210:intron | 10.0% |
!!! | ATTTTTTTAGTATTTTTCAA+AGG | - | chr7_4:43078557-43078576 | Msa1155210:CDS | 10.0% |
!! | AAAAAATTTAAGTGATTGTT+TGG | - | chr7_4:43075552-43075571 | Msa1155210:CDS | 15.0% |
!!! | ATAAAAAATTAGAGTTTGTT+TGG | - | chr7_4:43075892-43075911 | Msa1155210:CDS | 15.0% |
!!! | TCAATTTTTCTCTTTTAAAA+GGG | + | chr7_4:43076062-43076081 | None:intergenic | 15.0% |
!! | AATCAGAGTTTATATTATAA+TGG | + | chr7_4:43077128-43077147 | None:intergenic | 15.0% |
!! | TTATAATATAAACTCTGATT+TGG | - | chr7_4:43077128-43077147 | Msa1155210:intron | 15.0% |
!! | CTATTAATCTAAATTTAACA+TGG | + | chr7_4:43077541-43077560 | None:intergenic | 15.0% |
!! | AAAATAATTAACCATTTAAG+GGG | + | chr7_4:43079470-43079489 | None:intergenic | 15.0% |
!! | CAAAATAATTAACCATTTAA+GGG | + | chr7_4:43079471-43079490 | None:intergenic | 15.0% |
!! | TCAAAATAATTAACCATTTA+AGG | + | chr7_4:43079472-43079491 | None:intergenic | 15.0% |
!! | TATAAATGATTTAAATTTGC+AGG | - | chr7_4:43079552-43079571 | Msa1155210:intron | 15.0% |
!!! | ATCAAAATTTTGTCTTTTTG+TGG | + | chr7_4:43075191-43075210 | None:intergenic | 20.0% |
!! | AAAAACGATTAATTCAATCA+TGG | - | chr7_4:43075246-43075265 | Msa1155210:three_prime_UTR | 20.0% |
!! | AAAACGATTAATTCAATCAT+GGG | - | chr7_4:43075247-43075266 | Msa1155210:three_prime_UTR | 20.0% |
!! | AAAAAAATTGAGAGATTGTT+TGG | - | chr7_4:43075742-43075761 | Msa1155210:intron | 20.0% |
!!! | AAAATGTGTTTTTACCTTTT+TGG | - | chr7_4:43075606-43075625 | Msa1155210:intron | 20.0% |
!!! | CTCAATTTTTCTCTTTTAAA+AGG | + | chr7_4:43076063-43076082 | None:intergenic | 20.0% |
!! | GATTATTAAACCAAACATTA+TGG | + | chr7_4:43076180-43076199 | None:intergenic | 20.0% |
!! | AACATATTGGTAGAAAAATT+AGG | + | chr7_4:43076731-43076750 | None:intergenic | 20.0% |
!! | ATGGAAAGTAAATAAGATTT+GGG | + | chr7_4:43076794-43076813 | None:intergenic | 20.0% |
!! | TATGGAAAGTAAATAAGATT+TGG | + | chr7_4:43076795-43076814 | None:intergenic | 20.0% |
!! | TGGTTTAATTGATAAGAATA+CGG | - | chr7_4:43077571-43077590 | Msa1155210:intron | 20.0% |
!!! | TGATATATATGCATTTTACT+CGG | + | chr7_4:43077923-43077942 | None:intergenic | 20.0% |
!! | TGATATTTATATGACAGAAT+AGG | - | chr7_4:43078587-43078606 | Msa1155210:CDS | 20.0% |
!! | AAATCATTTATATCTCAACA+CGG | + | chr7_4:43079544-43079563 | None:intergenic | 20.0% |
!!! | TTTTGGATTTTGTTTACTTT+TGG | + | chr7_4:43079698-43079717 | None:intergenic | 20.0% |
!! | TCATGAACACAAAATTAAAA+GGG | + | chr7_4:43079953-43079972 | None:intergenic | 20.0% |
!!! | TTGCTATTGATTTATCGTTT+TGG | - | chr7_4:43075347-43075366 | Msa1155210:CDS | 25.0% |
!!! | TTTAAGTGATTGTTTGGTTT+TGG | - | chr7_4:43075558-43075577 | Msa1155210:CDS | 25.0% |
!!! | TTAAGTGATTGTTTGGTTTT+GGG | - | chr7_4:43075559-43075578 | Msa1155210:CDS | 25.0% |
!! | AAAATTAGAGTTTGTTTGGT+TGG | - | chr7_4:43075896-43075915 | Msa1155210:CDS | 25.0% |
!! | AAATTAGAGTTTGTTTGGTT+GGG | - | chr7_4:43075897-43075916 | Msa1155210:CDS | 25.0% |
!!! | ATTGAGAGATTGTTTTGTTT+TGG | - | chr7_4:43076077-43076096 | Msa1155210:CDS | 25.0% |
!!! | TTGAGAGATTGTTTTGTTTT+GGG | - | chr7_4:43076078-43076097 | Msa1155210:CDS | 25.0% |
!!! | AAAACGTGTTATTACCATTT+TGG | - | chr7_4:43076213-43076232 | Msa1155210:CDS | 25.0% |
! | ATACTCAAACATAACCAAAA+TGG | + | chr7_4:43076230-43076249 | None:intergenic | 25.0% |
!!! | ATTTTGGTTATGTTTGAGTA+TGG | - | chr7_4:43076229-43076248 | Msa1155210:CDS | 25.0% |
! | CAATTTGAATTACTTGTCAT+TGG | - | chr7_4:43076282-43076301 | Msa1155210:CDS | 25.0% |
! | AAGATATAGAAGCAACATAT+TGG | + | chr7_4:43076744-43076763 | None:intergenic | 25.0% |
!! | TCTTATTTACTTTCCATATG+TGG | - | chr7_4:43076797-43076816 | Msa1155210:CDS | 25.0% |
! | CCTTATAGCTATATGTTAAT+CGG | - | chr7_4:43076874-43076893 | Msa1155210:CDS | 25.0% |
! | ATGACCTTCACTATTTAATT+GGG | + | chr7_4:43076970-43076989 | None:intergenic | 25.0% |
! | TAAAGAAAATACAATGACGA+CGG | + | chr7_4:43077085-43077104 | None:intergenic | 25.0% |
! | GTTTATATTATAATGGCTGA+AGG | + | chr7_4:43077121-43077140 | None:intergenic | 25.0% |
!! | GTCACATGACTTTTATTAAA+TGG | - | chr7_4:43077203-43077222 | Msa1155210:intron | 25.0% |
! | ATTAAATGGTAGCATACTAT+AGG | - | chr7_4:43077217-43077236 | Msa1155210:intron | 25.0% |
! | GGTTTAATTGATAAGAATAC+GGG | - | chr7_4:43077572-43077591 | Msa1155210:intron | 25.0% |
! | GTGAAGATGATATATTGAAT+AGG | - | chr7_4:43077880-43077899 | Msa1155210:intron | 25.0% |
! | TATGATATAGGTGTAGAATA+GGG | + | chr7_4:43078064-43078083 | None:intergenic | 25.0% |
! | TAACATGAAAGCTATGATAT+AGG | + | chr7_4:43078076-43078095 | None:intergenic | 25.0% |
!! | GATGAACAGAATAAAACTTT+TGG | - | chr7_4:43078128-43078147 | Msa1155210:CDS | 25.0% |
!!! | AATAAAACTTTTGGTCTTTG+TGG | - | chr7_4:43078137-43078156 | Msa1155210:CDS | 25.0% |
! | ATTGAAGATCATATTCAATC+AGG | + | chr7_4:43078164-43078183 | None:intergenic | 25.0% |
!!! | AGTGAGTTTGTTTTGTATTT+GGG | + | chr7_4:43078275-43078294 | None:intergenic | 25.0% |
! | ACTAGAAAAGTCTACTTTAT+TGG | + | chr7_4:43078535-43078554 | None:intergenic | 25.0% |
!! | ATTTCATCCTTTGGAAAATT+TGG | + | chr7_4:43078679-43078698 | None:intergenic | 25.0% |
! | ATATCAATGATTTCATCCTT+TGG | + | chr7_4:43078688-43078707 | None:intergenic | 25.0% |
! | AGTTTAAAAAATCAACCAGA+AGG | + | chr7_4:43078912-43078931 | None:intergenic | 25.0% |
! | ATTATTTCATATCTAGCGTT+TGG | - | chr7_4:43079342-43079361 | Msa1155210:intron | 25.0% |
! | CAATTAACCACTTAATTAAG+CGG | - | chr7_4:43079437-43079456 | Msa1155210:intron | 25.0% |
!!! | TTTGACTTTTAGAATCATCT+TGG | - | chr7_4:43079487-43079506 | Msa1155210:intron | 25.0% |
! | TTTAAATTTGCAGGAATTGA+AGG | - | chr7_4:43079561-43079580 | Msa1155210:intron | 25.0% |
!! | TTCATTTTCTTGAGATATTG+AGG | + | chr7_4:43079611-43079630 | None:intergenic | 25.0% |
! | AGAACTCTGTAATATTTAAC+TGG | + | chr7_4:43079666-43079685 | None:intergenic | 25.0% |
!!! | TTTTGTTTACTTTTGGTTGT+CGG | + | chr7_4:43079691-43079710 | None:intergenic | 25.0% |
! | AGTAAACAAAATCCAAAACA+TGG | - | chr7_4:43079700-43079719 | Msa1155210:intron | 25.0% |
!!! | CTAACAGATTTTGGAATATT+AGG | + | chr7_4:43079802-43079821 | None:intergenic | 25.0% |
! | CTAATATTCCAAAATCTGTT+AGG | - | chr7_4:43079800-43079819 | Msa1155210:CDS | 25.0% |
!! | GTGTATAAAATATGCTTTTG+AGG | - | chr7_4:43079848-43079867 | Msa1155210:CDS | 25.0% |
!!! | TAAAATATGCTTTTGAGGAT+TGG | - | chr7_4:43079853-43079872 | Msa1155210:CDS | 25.0% |
!!! | ATATTAACTGAGTGTTGAAA+AGG | - | chr7_4:43079917-43079936 | Msa1155210:exon | 25.0% |
! | GTCATGAACACAAAATTAAA+AGG | + | chr7_4:43079954-43079973 | None:intergenic | 25.0% |
! | ATGTGTAGTTAACAATAGTT+TGG | - | chr7_4:43079997-43080016 | Msa1155210:five_prime_UTR | 25.0% |
! | CTTGACATCAAATTTATAAG+AGG | - | chr7_4:43080055-43080074 | Msa1155210:five_prime_UTR | 25.0% |
! | TTACTGTTAGGTTACGTTTT+TGG | + | chr7_4:43075142-43075161 | None:intergenic | 30.0% |
TTCTGCTTAATCACGATAAT+GGG | + | chr7_4:43075228-43075247 | None:intergenic | 30.0% | |
TTTCTGCTTAATCACGATAA+TGG | + | chr7_4:43075229-43075248 | None:intergenic | 30.0% | |
ATTAATTCAATCATGGGTGT+TGG | - | chr7_4:43075253-43075272 | Msa1155210:three_prime_UTR | 30.0% | |
TGAAACAAAAAGACAGTGAA+GGG | + | chr7_4:43075476-43075495 | None:intergenic | 30.0% | |
ATGAAACAAAAAGACAGTGA+AGG | + | chr7_4:43075477-43075496 | None:intergenic | 30.0% | |
!! | TTCACTGTCTTTTTGTTTCA+TGG | - | chr7_4:43075476-43075495 | Msa1155210:CDS | 30.0% |
ACACTCAAACATAGCAAAAA+AGG | + | chr7_4:43075623-43075642 | None:intergenic | 30.0% | |
!! | CGTGTGAAATTTGATTTTGT+TGG | - | chr7_4:43075700-43075719 | Msa1155210:intron | 30.0% |
TATGGTATAACAGCAATTTG+AGG | - | chr7_4:43075792-43075811 | Msa1155210:intron | 30.0% | |
!!! | TGATGATTTTAGCTTCTTTG+TGG | - | chr7_4:43075833-43075852 | Msa1155210:intron | 30.0% |
ACACTCAAACATAACCAAAA+AGG | + | chr7_4:43075961-43075980 | None:intergenic | 30.0% | |
!!! | TTTTTGGTTATGTTTGAGTG+TGG | - | chr7_4:43075960-43075979 | Msa1155210:CDS | 30.0% |
TGGTTCAAAACACAATTTGA+AGG | - | chr7_4:43076249-43076268 | Msa1155210:CDS | 30.0% | |
!! | TTGGTAGTTTTTGAATTCAG+TGG | - | chr7_4:43076301-43076320 | Msa1155210:CDS | 30.0% |
TATATCTTATGTCAGAGTTC+AGG | - | chr7_4:43076756-43076775 | Msa1155210:intron | 30.0% | |
CCGATTAACATATAGCTATA+AGG | + | chr7_4:43076877-43076896 | None:intergenic | 30.0% | |
CATGACCTTCACTATTTAAT+TGG | + | chr7_4:43076971-43076990 | None:intergenic | 30.0% | |
!!! | TTTTCTGGCTATATCTGTAT+AGG | - | chr7_4:43077268-43077287 | Msa1155210:intron | 30.0% |
! | TTTTCTTGATATGACTGATG+AGG | + | chr7_4:43077322-43077341 | None:intergenic | 30.0% |
TTGGAAAAGACAAACTATCA+TGG | + | chr7_4:43077364-43077383 | None:intergenic | 30.0% | |
TGTCATACATTGCTAAGTTA+CGG | + | chr7_4:43077393-43077412 | None:intergenic | 30.0% | |
TTTAGATTAATAGCTGAGCT+TGG | - | chr7_4:43077548-43077567 | Msa1155210:intron | 30.0% | |
AGAGGATCATTATAATTCTC+TGG | + | chr7_4:43077607-43077626 | None:intergenic | 30.0% | |
AGAGAATTATAATGATCCTC+TGG | - | chr7_4:43077606-43077625 | Msa1155210:intron | 30.0% | |
!! | AATTCGAAAAGTATTACCAG+AGG | + | chr7_4:43077625-43077644 | None:intergenic | 30.0% |
AACTTTCCAAAATACAAGAG+GGG | + | chr7_4:43077665-43077684 | None:intergenic | 30.0% | |
CAACTTTCCAAAATACAAGA+GGG | + | chr7_4:43077666-43077685 | None:intergenic | 30.0% | |
TCAACTTTCCAAAATACAAG+AGG | + | chr7_4:43077667-43077686 | None:intergenic | 30.0% | |
GACATATTGTAGCATTCAAA+CGG | + | chr7_4:43077726-43077745 | None:intergenic | 30.0% | |
AATATGTCAGATATTGAAGC+TGG | - | chr7_4:43077738-43077757 | Msa1155210:intron | 30.0% | |
ATATGTCAGATATTGAAGCT+GGG | - | chr7_4:43077739-43077758 | Msa1155210:intron | 30.0% | |
! | ATATATGCATTTTACTCGGA+AGG | + | chr7_4:43077919-43077938 | None:intergenic | 30.0% |
GTTTCTTTACATGAATGGAA+TGG | + | chr7_4:43077969-43077988 | None:intergenic | 30.0% | |
CTATGGTTTCTTTACATGAA+TGG | + | chr7_4:43077974-43077993 | None:intergenic | 30.0% | |
GAGAAAGTGATAATAGAAAC+TGG | - | chr7_4:43078008-43078027 | Msa1155210:intron | 30.0% | |
CTATGATATAGGTGTAGAAT+AGG | + | chr7_4:43078065-43078084 | None:intergenic | 30.0% | |
! | TTTTCATTTCCACTGTTTCA+TGG | + | chr7_4:43078100-43078119 | None:intergenic | 30.0% |
CATTAAAGCTGAGGAAAATA+TGG | - | chr7_4:43078233-43078252 | Msa1155210:CDS | 30.0% | |
GAGGAAAATATGGATATTGA+CGG | - | chr7_4:43078243-43078262 | Msa1155210:CDS | 30.0% | |
AGGAAAATATGGATATTGAC+GGG | - | chr7_4:43078244-43078263 | Msa1155210:CDS | 30.0% | |
!!! | GTGAGTTTGTTTTGTATTTG+GGG | + | chr7_4:43078274-43078293 | None:intergenic | 30.0% |
!!! | CAGTGAGTTTGTTTTGTATT+TGG | + | chr7_4:43078276-43078295 | None:intergenic | 30.0% |
! | TGATTGCAATTCTTGTTGTA+TGG | - | chr7_4:43078407-43078426 | Msa1155210:intron | 30.0% |
ATGACAGAATAGGAAACATA+AGG | - | chr7_4:43078597-43078616 | Msa1155210:CDS | 30.0% | |
AGCAGAAAAAGATGGAAAAT+TGG | - | chr7_4:43078620-43078639 | Msa1155210:CDS | 30.0% | |
ATGTATCTATGCAATGACAA+TGG | - | chr7_4:43078706-43078725 | Msa1155210:intron | 30.0% | |
!!! | AATGACAATGGTTACTTTTC+CGG | - | chr7_4:43078718-43078737 | Msa1155210:intron | 30.0% |
! | TTTTAAACTTCCATCAGAAC+TGG | - | chr7_4:43078923-43078942 | Msa1155210:intron | 30.0% |
TTTAAACTTCCATCAGAACT+GGG | - | chr7_4:43078924-43078943 | Msa1155210:intron | 30.0% | |
!! | AAATATTGCCTCTAAAACTC+CGG | - | chr7_4:43079125-43079144 | Msa1155210:intron | 30.0% |
TCTGTTGACAGATGAAAATA+TGG | - | chr7_4:43079260-43079279 | Msa1155210:intron | 30.0% | |
ATGAAAATATGGACCTTGTT+GGG | - | chr7_4:43079271-43079290 | Msa1155210:intron | 30.0% | |
TGATTCATAACCAACAAAAG+TGG | + | chr7_4:43079383-43079402 | None:intergenic | 30.0% | |
! | TTTAATGCCGCTTAATTAAG+TGG | + | chr7_4:43079447-43079466 | None:intergenic | 30.0% |
ATTTATATCTCAACACGGAA+TGG | + | chr7_4:43079539-43079558 | None:intergenic | 30.0% | |
! | TTTTCTTGAGATATTGAGGT+CGG | + | chr7_4:43079607-43079626 | None:intergenic | 30.0% |
!! | TTTGTTTACTTTTGGTTGTC+GGG | + | chr7_4:43079690-43079709 | None:intergenic | 30.0% |
! | TAATTTTGTGTTCATGACCA+AGG | - | chr7_4:43079956-43079975 | Msa1155210:five_prime_UTR | 30.0% |
! | AATTTTGTGTTCATGACCAA+GGG | - | chr7_4:43079957-43079976 | Msa1155210:five_prime_UTR | 30.0% |
AGGTTTCGTATGTTACTGTT+AGG | + | chr7_4:43075154-43075173 | None:intergenic | 35.0% | |
AAACCTTCATTGCGTGAATA+GGG | + | chr7_4:43075304-43075323 | None:intergenic | 35.0% | |
AAAACCTTCATTGCGTGAAT+AGG | + | chr7_4:43075305-43075324 | None:intergenic | 35.0% | |
!!! | ACCTCAGACTCACTTTTTTT+CGG | - | chr7_4:43075416-43075435 | Msa1155210:CDS | 35.0% |
GACGATTAATCTCTTCTCAA+AGG | - | chr7_4:43075438-43075457 | Msa1155210:CDS | 35.0% | |
TTGTGTGTTGTGTTTGAGTA+TGG | - | chr7_4:43075774-43075793 | Msa1155210:intron | 35.0% | |
TGTGGTTCAACAGCAATTTA+AGG | - | chr7_4:43075978-43075997 | Msa1155210:CDS | 35.0% | |
!!! | GAGATTGTTTTGTTTTGGGT+TGG | - | chr7_4:43076082-43076101 | Msa1155210:CDS | 35.0% |
TCAAATTGCGCCATAATGTT+TGG | - | chr7_4:43076167-43076186 | Msa1155210:CDS | 35.0% | |
! | AGTTTTTGAATTCAGTGGAG+TGG | - | chr7_4:43076306-43076325 | Msa1155210:intron | 35.0% |
!! | TTTAGTCTTGTGTGTTGAGT+TGG | - | chr7_4:43076370-43076389 | Msa1155210:intron | 35.0% |
TGGTATAGAACAGTCAAACT+AGG | - | chr7_4:43076390-43076409 | Msa1155210:intron | 35.0% | |
GGTATAGAACAGTCAAACTA+GGG | - | chr7_4:43076391-43076410 | Msa1155210:intron | 35.0% | |
CGTTAATTCTTTCACCTTGA+TGG | - | chr7_4:43076649-43076668 | Msa1155210:intron | 35.0% | |
TACTTTCCATATGTGGATTC+TGG | - | chr7_4:43076804-43076823 | Msa1155210:CDS | 35.0% | |
GAAAAACCAGAATCCACATA+TGG | + | chr7_4:43076813-43076832 | None:intergenic | 35.0% | |
GCTATATGTTAATCGGTGAT+AGG | - | chr7_4:43076881-43076900 | Msa1155210:CDS | 35.0% | |
TGTGCCCAATTAAATAGTGA+AGG | - | chr7_4:43076963-43076982 | Msa1155210:CDS | 35.0% | |
AGCTGTAAACTAAGCAAAGA+TGG | + | chr7_4:43077177-43077196 | None:intergenic | 35.0% | |
! | TGCTAAGTTACGGGAATTTT+TGG | + | chr7_4:43077383-43077402 | None:intergenic | 35.0% |
GTCATACATTGCTAAGTTAC+GGG | + | chr7_4:43077392-43077411 | None:intergenic | 35.0% | |
CAGATGGTATAATGTGAGTA+TGG | + | chr7_4:43077500-43077519 | None:intergenic | 35.0% | |
!! | TGTATTTTGGAAAGTTGACG+TGG | - | chr7_4:43077669-43077688 | Msa1155210:intron | 35.0% |
CCAAAAGAGAGATAGCTATT+AGG | + | chr7_4:43077785-43077804 | None:intergenic | 35.0% | |
! | CCTAATAGCTATCTCTCTTT+TGG | - | chr7_4:43077782-43077801 | Msa1155210:intron | 35.0% |
! | ATAGCTATCTCTCTTTTGGT+TGG | - | chr7_4:43077786-43077805 | Msa1155210:intron | 35.0% |
GGAAATGATTACGATTTGAG+TGG | - | chr7_4:43077807-43077826 | Msa1155210:intron | 35.0% | |
CAATGCAGATTACATGAGAT+AGG | - | chr7_4:43078180-43078199 | Msa1155210:CDS | 35.0% | |
AGATTACATGAGATAGGCAA+AGG | - | chr7_4:43078186-43078205 | Msa1155210:CDS | 35.0% | |
GATTACATGAGATAGGCAAA+GGG | - | chr7_4:43078187-43078206 | Msa1155210:CDS | 35.0% | |
TCCTATTGACATTAAAGCTG+AGG | - | chr7_4:43078224-43078243 | Msa1155210:CDS | 35.0% | |
! | TCCTCAGCTTTAATGTCAAT+AGG | + | chr7_4:43078228-43078247 | None:intergenic | 35.0% |
! | AAATGATCTCTTTTGTTGCC+CGG | + | chr7_4:43078315-43078334 | None:intergenic | 35.0% |
! | TTCATGTGAATTTTGTGTCG+CGG | - | chr7_4:43078341-43078360 | Msa1155210:intron | 35.0% |
! | CAATCACATTTAAAACCCTC+TGG | + | chr7_4:43078393-43078412 | None:intergenic | 35.0% |
! | GCAATTCTTGTTGTATGGTA+TGG | - | chr7_4:43078412-43078431 | Msa1155210:intron | 35.0% |
AAGTGCTCTGTCATCATATA+TGG | - | chr7_4:43078480-43078499 | Msa1155210:intron | 35.0% | |
ACATAAGGAGCAGAAAAAGA+TGG | - | chr7_4:43078612-43078631 | Msa1155210:CDS | 35.0% | |
AATCTGTGACAAGATTGCAA+AGG | - | chr7_4:43078651-43078670 | Msa1155210:CDS | 35.0% | |
! | AAAGGAGCCAAATTTTCCAA+AGG | - | chr7_4:43078669-43078688 | Msa1155210:CDS | 35.0% |
TTCATCACAGTTAAACGTAC+CGG | + | chr7_4:43078740-43078759 | None:intergenic | 35.0% | |
! | ACTTTGTTTGCAGTGAATGA+TGG | - | chr7_4:43078853-43078872 | Msa1155210:intron | 35.0% |
AAGAAGATGGTTGACATCAT+AGG | + | chr7_4:43078979-43078998 | None:intergenic | 35.0% | |
AACCATCTTCTTGAGAGAAA+TGG | - | chr7_4:43078987-43079006 | Msa1155210:intron | 35.0% | |
!! | CAACCGATAGTTTGCTATTT+GGG | - | chr7_4:43079019-43079038 | Msa1155210:intron | 35.0% |
! | ATCAGTTTTACGTTGTCAAG+TGG | - | chr7_4:43079088-43079107 | Msa1155210:intron | 35.0% |
!! | TTTATTTGCCGGAGTTTTAG+AGG | + | chr7_4:43079136-43079155 | None:intergenic | 35.0% |
AAAACTCCGGCAAATAAATC+TGG | - | chr7_4:43079138-43079157 | Msa1155210:intron | 35.0% | |
TCCATCTTCTTCACAAATCT+GGG | + | chr7_4:43079232-43079251 | None:intergenic | 35.0% | |
ATCCATCTTCTTCACAAATC+TGG | + | chr7_4:43079233-43079252 | None:intergenic | 35.0% | |
GATGAAAATATGGACCTTGT+TGG | - | chr7_4:43079270-43079289 | Msa1155210:intron | 35.0% | |
TGAAAATATGGACCTTGTTG+GGG | - | chr7_4:43079272-43079291 | Msa1155210:intron | 35.0% | |
TAATAAATACCTGTTCCTGC+CGG | + | chr7_4:43079326-43079345 | None:intergenic | 35.0% | |
!! | CAACTATCATCCACTTTTGT+TGG | - | chr7_4:43079370-43079389 | Msa1155210:intron | 35.0% |
GCTAATGATTAGCATCTAAC+TGG | - | chr7_4:43079412-43079431 | Msa1155210:intron | 35.0% | |
!!! | TTTTGAGTTTGGTGATGTTG+AGG | + | chr7_4:43079638-43079657 | None:intergenic | 35.0% |
TCAACATCACCAAACTCAAA+AGG | - | chr7_4:43079637-43079656 | Msa1155210:intron | 35.0% | |
CACACTACTAGTCAAACAAA+AGG | + | chr7_4:43079831-43079850 | None:intergenic | 35.0% | |
!! | AATTCAATCATGGGTGTTGG+TGG | - | chr7_4:43075256-43075275 | Msa1155210:three_prime_UTR | 40.0% |
! | AAAAAAGTGAGTCTGAGGTG+AGG | + | chr7_4:43075415-43075434 | None:intergenic | 40.0% |
TCCGAAAAAAAGTGAGTCTG+AGG | + | chr7_4:43075420-43075439 | None:intergenic | 40.0% | |
AATTCAATCAGCCCCAATTG+CGG | + | chr7_4:43075653-43075672 | None:intergenic | 40.0% | |
TAGAACAGTCAAACTAGGGA+TGG | - | chr7_4:43076395-43076414 | Msa1155210:intron | 40.0% | |
! | TTTGTAGTTTGGAGCGTTTC+CGG | - | chr7_4:43076462-43076481 | Msa1155210:CDS | 40.0% |
! | CCAGGATTGCTAGATTTTTC+CGG | - | chr7_4:43076527-43076546 | Msa1155210:CDS | 40.0% |
! | AAGATGTGTTCAAGAGTGTG+TGG | - | chr7_4:43076624-43076643 | Msa1155210:intron | 40.0% |
! | GTGACTTGTGATAACCATCA+AGG | + | chr7_4:43076666-43076685 | None:intergenic | 40.0% |
TGCACTTAGTTGCTAAAACG+TGG | - | chr7_4:43076697-43076716 | Msa1155210:intron | 40.0% | |
!! | TAGGAACTTGCTAAGCTACT+TGG | - | chr7_4:43076900-43076919 | Msa1155210:CDS | 40.0% |
!! | AGGAACTTGCTAAGCTACTT+GGG | - | chr7_4:43076901-43076920 | Msa1155210:CDS | 40.0% |
ATTCCTGTACTGAAGGCTAA+AGG | - | chr7_4:43076924-43076943 | Msa1155210:CDS | 40.0% | |
ACAGTGATGCATTCCTCTTT+GGG | - | chr7_4:43077012-43077031 | Msa1155210:intron | 40.0% | |
TAATGCATTTAGCCCCAAAG+AGG | + | chr7_4:43077028-43077047 | None:intergenic | 40.0% | |
!! | CGGTCACTTACTTTGGAATT+GGG | + | chr7_4:43077065-43077084 | None:intergenic | 40.0% |
!! | ACGGTCACTTACTTTGGAAT+TGG | + | chr7_4:43077066-43077085 | None:intergenic | 40.0% |
! | GCCAGAAAACTCAACTTGTT+GGG | + | chr7_4:43077257-43077276 | None:intergenic | 40.0% |
AGCCAGAAAACTCAACTTGT+TGG | + | chr7_4:43077258-43077277 | None:intergenic | 40.0% | |
GACAAACTATCATGGAAGAC+TGG | + | chr7_4:43077356-43077375 | None:intergenic | 40.0% | |
ATGTGAGTATGGCAAGATGA+GGG | + | chr7_4:43077489-43077508 | None:intergenic | 40.0% | |
AATGTGAGTATGGCAAGATG+AGG | + | chr7_4:43077490-43077509 | None:intergenic | 40.0% | |
!! | GTATGCATGCTTTTTGCAGA+TGG | + | chr7_4:43077516-43077535 | None:intergenic | 40.0% |
AGATTAATAGCTGAGCTTGG+TGG | - | chr7_4:43077551-43077570 | Msa1155210:intron | 40.0% | |
! | TTCCTACCCCTCTTGTATTT+TGG | - | chr7_4:43077656-43077675 | Msa1155210:intron | 40.0% |
TTCCAAAATACAAGAGGGGT+AGG | + | chr7_4:43077661-43077680 | None:intergenic | 40.0% | |
! | TTCTTTTCCTTTCTGCATGC+AGG | - | chr7_4:43077698-43077717 | Msa1155210:intron | 40.0% |
TACGATTTGAGTGGTGTTCA+AGG | - | chr7_4:43077816-43077835 | Msa1155210:intron | 40.0% | |
ACGATTTGAGTGGTGTTCAA+GGG | - | chr7_4:43077817-43077836 | Msa1155210:intron | 40.0% | |
CTCTCAAATTCTCTCAGCTA+TGG | + | chr7_4:43077991-43078010 | None:intergenic | 40.0% | |
TCATGTTAGCCATGAAACAG+TGG | - | chr7_4:43078088-43078107 | Msa1155210:intron | 40.0% | |
AAACTCACTGCTCATTCTGT+GGG | - | chr7_4:43078286-43078305 | Msa1155210:intron | 40.0% | |
AGGTTGCTTGAAAAAACCAG+AGG | - | chr7_4:43078374-43078393 | Msa1155210:intron | 40.0% | |
GGTTGCTTGAAAAAACCAGA+GGG | - | chr7_4:43078375-43078394 | Msa1155210:intron | 40.0% | |
CAGTGACAAAATCGATCTAG+AGG | + | chr7_4:43078438-43078457 | None:intergenic | 40.0% | |
TCAACCAGAAGGTCCATATT+CGG | + | chr7_4:43078901-43078920 | None:intergenic | 40.0% | |
ATAATCCGCCGAATGTATGA+CGG | + | chr7_4:43078952-43078971 | None:intergenic | 40.0% | |
AGCCATTTCTCTCAAGAAGA+TGG | + | chr7_4:43078992-43079011 | None:intergenic | 40.0% | |
CCAAATAGCAAACTATCGGT+TGG | + | chr7_4:43079021-43079040 | None:intergenic | 40.0% | |
!! | CCAACCGATAGTTTGCTATT+TGG | - | chr7_4:43079018-43079037 | Msa1155210:intron | 40.0% |
CTGCCCAAATAGCAAACTAT+CGG | + | chr7_4:43079025-43079044 | None:intergenic | 40.0% | |
AAACGTGTGAAGACGAGATA+CGG | - | chr7_4:43079063-43079082 | Msa1155210:intron | 40.0% | |
TGCATGCCAGATTTATTTGC+CGG | + | chr7_4:43079147-43079166 | None:intergenic | 40.0% | |
! | GCATGATGTTGATGAAACAG+TGG | - | chr7_4:43079182-43079201 | Msa1155210:intron | 40.0% |
CCATCTTCTTCACAAATCTG+GGG | + | chr7_4:43079231-43079250 | None:intergenic | 40.0% | |
CTTACGCAGAAGAAGTGAAA+AGG | - | chr7_4:43079298-43079317 | Msa1155210:intron | 40.0% | |
CAGAAGAAGTGAAAAGGTTC+CGG | - | chr7_4:43079304-43079323 | Msa1155210:intron | 40.0% | |
!!! | AACTGGACACCTTTTGAGTT+TGG | + | chr7_4:43079649-43079668 | None:intergenic | 40.0% |
! | GATGACTCTTCTCCATGTTT+TGG | + | chr7_4:43079715-43079734 | None:intergenic | 40.0% |
!!! | GTCTTGGCTGTCATTTTTCT+TGG | + | chr7_4:43079743-43079762 | None:intergenic | 40.0% |
AAAAATGACAGCCAAGACAG+TGG | - | chr7_4:43079745-43079764 | Msa1155210:CDS | 40.0% | |
TTGTGGAACAGACACTGAAC+AGG | + | chr7_4:43075174-43075193 | None:intergenic | 45.0% | |
!! | TGGGTGTTGGTGGTAATTTC+TGG | - | chr7_4:43075266-43075285 | Msa1155210:three_prime_UTR | 45.0% |
!! | GGGTGTTGGTGGTAATTTCT+GGG | - | chr7_4:43075267-43075286 | Msa1155210:three_prime_UTR | 45.0% |
AAGCCCTATTCACGCAATGA+AGG | - | chr7_4:43075298-43075317 | Msa1155210:three_prime_UTR | 45.0% | |
TGAGGTGAGGTTTCTTGACA+GGG | + | chr7_4:43075402-43075421 | None:intergenic | 45.0% | |
AGTGTAGTTCAGCCGCAATT+GGG | - | chr7_4:43075638-43075657 | Msa1155210:intron | 45.0% | |
! | CAAGCCTTATCCGACTAAGT+GGG | - | chr7_4:43076131-43076150 | Msa1155210:CDS | 45.0% |
AGTGGAGTGGAGTTTGATAG+TGG | - | chr7_4:43076319-43076338 | Msa1155210:intron | 45.0% | |
TTTCCGGTGTTCGTTGTTGA+TGG | - | chr7_4:43076478-43076497 | Msa1155210:CDS | 45.0% | |
TTCCGGTGTTCGTTGTTGAT+GGG | - | chr7_4:43076479-43076498 | Msa1155210:CDS | 45.0% | |
TCCATCTCCGTTGAAATCAC+AGG | - | chr7_4:43076504-43076523 | Msa1155210:CDS | 45.0% | |
ATCCTGGCCTGTGATTTCAA+CGG | + | chr7_4:43076514-43076533 | None:intergenic | 45.0% | |
CCGGAAAAATCTAGCAATCC+TGG | + | chr7_4:43076530-43076549 | None:intergenic | 45.0% | |
! | GCTAGATTTTTCCGGTCTTC+CGG | - | chr7_4:43076535-43076554 | Msa1155210:CDS | 45.0% |
! | CAAGCTAGTCGACTCAATTC+CGG | + | chr7_4:43076557-43076576 | None:intergenic | 45.0% |
!! | AATTGAGTCGACTAGCTTGC+CGG | - | chr7_4:43076558-43076577 | Msa1155210:CDS | 45.0% |
GAAACACCTTCTTCAGCAAC+CGG | + | chr7_4:43076580-43076599 | None:intergenic | 45.0% | |
!! | CTGAAGAAGGTGTTTCAGCT+GGG | - | chr7_4:43076584-43076603 | Msa1155210:intron | 45.0% |
ACTTGGGATTCCTGTACTGA+AGG | - | chr7_4:43076917-43076936 | Msa1155210:CDS | 45.0% | |
! | TCTCCTTTAGCCTTCAGTAC+AGG | + | chr7_4:43076930-43076949 | None:intergenic | 45.0% |
AAGAGGAATGCATCACTGTC+AGG | + | chr7_4:43077011-43077030 | None:intergenic | 45.0% | |
GACAGTGATGCATTCCTCTT+TGG | - | chr7_4:43077011-43077030 | Msa1155210:intron | 45.0% | |
CAGTGATGCATTCCTCTTTG+GGG | - | chr7_4:43077013-43077032 | Msa1155210:intron | 45.0% | |
ATGACGACGGTCACTTACTT+TGG | + | chr7_4:43077072-43077091 | None:intergenic | 45.0% | |
!! | AACTCAACTTGTTGGGCACA+GGG | + | chr7_4:43077250-43077269 | None:intergenic | 45.0% |
!! | AAACTCAACTTGTTGGGCAC+AGG | + | chr7_4:43077251-43077270 | None:intergenic | 45.0% |
!! | GCCCAACAAGTTGAGTTTTC+TGG | - | chr7_4:43077253-43077272 | Msa1155210:intron | 45.0% |
CTATCATGGAAGACTGGATG+AGG | + | chr7_4:43077350-43077369 | None:intergenic | 45.0% | |
GAACTAACAGAAGTCTGACG+CGG | + | chr7_4:43077445-43077464 | None:intergenic | 45.0% | |
TCAGATATTGAAGCTGGGCT+TGG | - | chr7_4:43077744-43077763 | Msa1155210:intron | 45.0% | |
TTGAGTGGTGTTCAAGGGAT+CGG | - | chr7_4:43077822-43077841 | Msa1155210:intron | 45.0% | |
CAAACTCACTGCTCATTCTG+TGG | - | chr7_4:43078285-43078304 | Msa1155210:intron | 45.0% | |
! | TGTGAATTTTGTGTCGCGGA+TGG | - | chr7_4:43078345-43078364 | Msa1155210:intron | 45.0% |
!! | ATGATGGACCTCAGATCTCA+TGG | - | chr7_4:43078869-43078888 | Msa1155210:intron | 45.0% |
! | TGATGGACCTCAGATCTCAT+GGG | - | chr7_4:43078870-43078889 | Msa1155210:intron | 45.0% |
CTCATGGGAAAGACCGAATA+TGG | - | chr7_4:43078885-43078904 | Msa1155210:intron | 45.0% | |
AAGACCGAATATGGACCTTC+TGG | - | chr7_4:43078894-43078913 | Msa1155210:intron | 45.0% | |
ACTGGGATCCGTCATACATT+CGG | - | chr7_4:43078941-43078960 | Msa1155210:intron | 45.0% | |
TGTCAAGTGGAAACGTGCAA+TGG | - | chr7_4:43079101-43079120 | Msa1155210:intron | 45.0% | |
GTCAAGTGGAAACGTGCAAT+GGG | - | chr7_4:43079102-43079121 | Msa1155210:intron | 45.0% | |
CCCCAGATTTGTGAAGAAGA+TGG | - | chr7_4:43079228-43079247 | Msa1155210:intron | 45.0% | |
GCGGCATTAAACCCCTTAAA+TGG | - | chr7_4:43079456-43079475 | Msa1155210:intron | 45.0% | |
GGACTTGACGATTTCCTCTT+TGG | + | chr7_4:43079781-43079800 | None:intergenic | 45.0% | |
!!! | TTTTTTATTATATTATCAAA+AGG | + | chr7_4:43075880-43075899 | None:intergenic | 5.0% |
GAGGTGAGGTTTCTTGACAG+GGG | + | chr7_4:43075401-43075420 | None:intergenic | 50.0% | |
CTGAGGTGAGGTTTCTTGAC+AGG | + | chr7_4:43075403-43075422 | None:intergenic | 50.0% | |
GAGTGTAGTTCAGCCGCAAT+TGG | - | chr7_4:43075637-43075656 | Msa1155210:intron | 50.0% | |
GTGTAGTTCAGCCGCAATTG+GGG | - | chr7_4:43075639-43075658 | Msa1155210:intron | 50.0% | |
CCACTTAGTCGGATAAGGCT+TGG | + | chr7_4:43076133-43076152 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCGACTAAG+TGG | - | chr7_4:43076130-43076149 | Msa1155210:CDS | 50.0% |
CCTTATCCGACTAAGTGGGT+CGG | - | chr7_4:43076135-43076154 | Msa1155210:CDS | 50.0% | |
ATGTAGCCGACCCACTTAGT+CGG | + | chr7_4:43076144-43076163 | None:intergenic | 50.0% | |
GTCCCATCAACAACGAACAC+CGG | + | chr7_4:43076484-43076503 | None:intergenic | 50.0% | |
GCCTGTGATTTCAACGGAGA+TGG | + | chr7_4:43076508-43076527 | None:intergenic | 50.0% | |
TCGACTCAATTCCGGAAGAC+CGG | + | chr7_4:43076549-43076568 | None:intergenic | 50.0% | |
!! | GCTGAAGAAGGTGTTTCAGC+TGG | - | chr7_4:43076583-43076602 | Msa1155210:intron | 50.0% |
!! | AAGAAGGTGTTTCAGCTGGG+AGG | - | chr7_4:43076587-43076606 | Msa1155210:intron | 50.0% |
AACGGTTCCTGCATGCAGAA+AGG | + | chr7_4:43077708-43077727 | None:intergenic | 50.0% | |
AAGCTGGGCTTGGATTGAAG+AGG | - | chr7_4:43077754-43077773 | Msa1155210:intron | 50.0% | |
GGTCTTTCCCATGAGATCTG+AGG | + | chr7_4:43078880-43078899 | None:intergenic | 50.0% | |
!! | ATGACGGATCCCAGTTCTGA+TGG | + | chr7_4:43078936-43078955 | None:intergenic | 50.0% |
AGAAGTGAAAAGGTTCCGGC+AGG | - | chr7_4:43079308-43079327 | Msa1155210:intron | 50.0% | |
AATGACAGCCAAGACAGTGG+AGG | - | chr7_4:43079748-43079767 | Msa1155210:CDS | 50.0% | |
!! | GTTTTGAGCCTCCACTGTCT+TGG | + | chr7_4:43079759-43079778 | None:intergenic | 50.0% |
GTGGAGGCTCAAAACCAAAG+AGG | - | chr7_4:43079764-43079783 | Msa1155210:CDS | 50.0% | |
! | AGGCGACGCCTAACAGATTT+TGG | + | chr7_4:43079811-43079830 | None:intergenic | 50.0% |
CACACTGAACTAACTGCCCT+TGG | + | chr7_4:43079976-43079995 | None:intergenic | 50.0% | |
CCGACCCACTTAGTCGGATA+AGG | + | chr7_4:43076138-43076157 | None:intergenic | 55.0% | |
GACTAAGTGGGTCGGCTACA+TGG | - | chr7_4:43076143-43076162 | Msa1155210:CDS | 55.0% | |
CTCCGTTGAAATCACAGGCC+AGG | - | chr7_4:43076509-43076528 | Msa1155210:CDS | 55.0% | |
! | AGCTTGCCGGTTGCTGAAGA+AGG | - | chr7_4:43076571-43076590 | Msa1155210:intron | 55.0% |
GGCAAGATGAGGGCTCACAA+TGG | + | chr7_4:43077479-43077498 | None:intergenic | 55.0% | |
CTGCTCATTCTGTGGGCATC+CGG | - | chr7_4:43078293-43078312 | Msa1155210:intron | 55.0% | |
TGCTCATTCTGTGGGCATCC+GGG | - | chr7_4:43078294-43078313 | Msa1155210:intron | 55.0% | |
TGTGTCGCGGATGGCAATGA+AGG | - | chr7_4:43078354-43078373 | Msa1155210:intron | 55.0% | |
GGGATCCGTCATACATTCGG+CGG | - | chr7_4:43078944-43078963 | Msa1155210:intron | 55.0% | |
GAAAAGGTTCCGGCAGGAAC+AGG | - | chr7_4:43079314-43079333 | Msa1155210:intron | 55.0% | |
CTGCGTAAGCAGCCCCAACA+AGG | + | chr7_4:43079287-43079306 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 43075104 | 43080083 | 43075104 | ID=Msa1155210;Name=Msa1155210 |
chr7_4 | mRNA | 43075104 | 43080083 | 43075104 | ID=Msa1155210-mRNA-1;Parent=Msa1155210;Name=Msa1155210-mRNA-1;_AED=0.04;_eAED=0.04;_QI=161|1|1|1|1|1|8|240|613 |
chr7_4 | exon | 43075104 | 43075613 | 43075104 | ID=Msa1155210-mRNA-1:exon:10735;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43075852 | 43076321 | 43075852 | ID=Msa1155210-mRNA-1:exon:10734;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43076448 | 43076583 | 43076448 | ID=Msa1155210-mRNA-1:exon:10733;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43076759 | 43076999 | 43076759 | ID=Msa1155210-mRNA-1:exon:10732;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43077286 | 43077467 | 43077286 | ID=Msa1155210-mRNA-1:exon:10731;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43078114 | 43078284 | 43078114 | ID=Msa1155210-mRNA-1:exon:10730;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43078542 | 43078718 | 43078542 | ID=Msa1155210-mRNA-1:exon:10729;Parent=Msa1155210-mRNA-1 |
chr7_4 | exon | 43079728 | 43080083 | 43079728 | ID=Msa1155210-mRNA-1:exon:10728;Parent=Msa1155210-mRNA-1 |
chr7_4 | five_prime_UTR | 43079923 | 43080083 | 43079923 | ID=Msa1155210-mRNA-1:five_prime_utr;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43079728 | 43079922 | 43079728 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43078542 | 43078718 | 43078542 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43078114 | 43078284 | 43078114 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43077286 | 43077467 | 43077286 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43076759 | 43076999 | 43076759 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43076448 | 43076583 | 43076448 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43075852 | 43076321 | 43075852 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | CDS | 43075344 | 43075613 | 43075344 | ID=Msa1155210-mRNA-1:cds;Parent=Msa1155210-mRNA-1 |
chr7_4 | three_prime_UTR | 43075104 | 43075343 | 43075104 | ID=Msa1155210-mRNA-1:three_prime_utr;Parent=Msa1155210-mRNA-1 |
Gene Sequence |
Protein sequence |