AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1066940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1066940 MtrunA17_Chr7g0247921 97.222 180 5 0 20 199 20 199 6.56e-116 328
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1066940 AT2G46000.1 54.335 173 73 3 24 194 31 199 5.87e-49 159

Find 87 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGGGTAAAATGGGAATTT+AGG 0.231166 7_2:-61105316 Msa1066930:three_prime_UTR
AATTGTTAAACTTGGTTGTT+TGG 0.269847 7_2:-61107420 Msa1066930:intron
GGTTGTTTGGATTAGTGAAT+TGG 0.275984 7_2:-61107407 Msa1066930:intron
GTTGTTTGGATTAGTGAATT+GGG 0.276815 7_2:-61107406 Msa1066930:intron
TTTCTTCACTAGCATTTAAA+TGG 0.285988 7_2:+61106997 Msa1066940:three_prime_UTR
CAATCAAGCCTTGTTGCATT+TGG 0.295464 7_2:+61107031 Msa1066940:three_prime_UTR
CAGTCTATATTATTAACTTT+TGG 0.315316 7_2:-61107152 Msa1066930:three_prime_UTR
AGACGCATATGAGATTAAAA+TGG 0.319206 7_2:+61106740 Msa1066940:CDS
GCTGTTGGAGTAAGGTTTAC+AGG 0.326560 7_2:+61106294 Msa1066940:CDS
CGCCACACCGGACCTGTTAT+CGG 0.329665 7_2:+61105500 Msa1066940:CDS
TTCATCTAGGGATGGATCTC+CGG 0.333105 7_2:-61106784 Msa1066930:three_prime_UTR
TCTACCTGGGAGAATTTGTT+TGG 0.335150 7_2:+61107074 Msa1066940:three_prime_UTR
GAATACAATCATGTTCAATA+TGG 0.335159 7_2:+61106326 Msa1066940:CDS
ACTTCATGCAATTATGCCTT+TGG 0.348730 7_2:-61105207 Msa1066930:three_prime_UTR
GTTCAATATGGACAGCATTA+AGG 0.353323 7_2:+61106338 Msa1066940:CDS
AAGAACGTGTGTCCATTTCA+TGG 0.366661 7_2:-61106262 Msa1066930:three_prime_UTR
CTACCTGGGAGAATTTGTTT+GGG 0.370951 7_2:+61107075 Msa1066940:three_prime_UTR
TTAATAATATAGACTGGAAA+TGG 0.373223 7_2:+61107159 Msa1066940:three_prime_UTR
GCTTCTGAATGAGTTCATCT+AGG 0.380340 7_2:-61106797 Msa1066930:three_prime_UTR
GAATTTCCATCAACTTCCTC+TGG 0.384520 7_2:-61106855 Msa1066930:three_prime_UTR
GACGCATATGAGATTAAAAT+GGG 0.401212 7_2:+61106741 Msa1066940:CDS
AAAACAGAATTATAGTTAAA+CGG 0.403540 7_2:+61106879 Msa1066940:exon
AGCTTAACGAATCCGATAAC+AGG 0.407658 7_2:-61105512 Msa1066930:three_prime_UTR
TAATTAATAATTGTTAAACT+TGG 0.413103 7_2:-61107428 Msa1066930:intron
GGTCCACATCACCGACGAAC+TGG 0.418590 7_2:+61105352 Msa1066940:CDS
TAGCTGAACTTGCCATGAAA+TGG 0.419180 7_2:+61106250 Msa1066940:CDS
TAATCTCATATGCGTCTGAT+TGG 0.422754 7_2:-61106734 Msa1066930:three_prime_UTR
TTAGGGAGATTAGAAGAAGA+AGG 0.432493 7_2:-61105298 Msa1066930:three_prime_UTR
GGATGATGATTGGAAGGAAT+GGG 0.434248 7_2:+61105397 Msa1066940:CDS
GGATTCGTTAAGCTCCGATT+TGG 0.439915 7_2:+61105521 Msa1066940:CDS
GAACCGGAGCTGTTGGAGTA+AGG 0.443973 7_2:+61106286 Msa1066940:CDS
GAGGGTAAAATGGGAATTTA+GGG 0.444967 7_2:-61105315 Msa1066930:three_prime_UTR
GATCTTCGATTCATCCATCT+TGG 0.447981 7_2:-61105459 Msa1066930:three_prime_UTR
TTGTTTATGTATAAATAAGA+TGG 0.448122 7_2:+61107245 Msa1066940:three_prime_UTR
GAGATCAATAAGCTGAATCC+TGG 0.454047 7_2:+61107341 Msa1066940:three_prime_UTR
AAAATGTGGTTACCGGAGTC+CGG 0.454990 7_2:-61105550 Msa1066930:intron
AGGATGATGATTGGAAGGAA+TGG 0.465789 7_2:+61105396 Msa1066940:CDS
TTGTTTGGATTAGTGAATTG+GGG 0.466909 7_2:-61107405 Msa1066930:intron
TCCATCTTGGTTAAATCAGC+GGG 0.470952 7_2:-61105446 Msa1066930:three_prime_UTR
TCAGTAGCAAGCTGAAATGA+TGG 0.478850 7_2:-61107311 Msa1066930:exon
ACGATGAGGAGGATGATGAT+TGG 0.481020 7_2:+61105387 Msa1066940:CDS
TATGGACAGCATTAAGGACT+TGG 0.481375 7_2:+61106344 Msa1066940:CDS
TAGGGAGATTAGAAGAAGAA+GGG 0.482523 7_2:-61105297 Msa1066930:three_prime_UTR
GCTAGTCCAGAGGAAGTTGA+TGG 0.484655 7_2:+61106849 Msa1066940:CDS
TGGACACACGTTCTTAGAAC+CGG 0.492589 7_2:+61106270 Msa1066940:CDS
ATTTGGTGTTCGCCGGACTC+CGG 0.502610 7_2:+61105538 Msa1066940:CDS
TCATCTAGGGATGGATCTCC+GGG 0.510429 7_2:-61106783 Msa1066930:three_prime_UTR
TAAATCAGCGGGAGTGAAAG+AGG 0.519565 7_2:-61105435 Msa1066930:three_prime_UTR
CTTCTGAATGAGTTCATCTA+GGG 0.521992 7_2:-61106796 Msa1066930:three_prime_UTR
TGCTTTATCTCAACGTCTAG+AGG 0.522037 7_2:-61106914 Msa1066930:three_prime_UTR
GAGTCCGGCGAACACCAAAT+CGG 0.524019 7_2:-61105535 Msa1066930:three_prime_UTR
GTTCTTAGAACCGGAGCTGT+TGG 0.528500 7_2:+61106279 Msa1066940:CDS
TCCCGCTGATTTAACCAAGA+TGG 0.531039 7_2:+61105445 Msa1066940:CDS
ATGAAGCAGCAGCCAACCCC+AGG 0.535732 7_2:-61107359 Msa1066930:CDS
AGATCAATAAGCTGAATCCT+GGG 0.543296 7_2:+61107342 Msa1066940:three_prime_UTR
AGCTCCGATTTGGTGTTCGC+CGG 0.544891 7_2:+61105531 Msa1066940:CDS
TGAGGAGGATGATGATTGGA+AGG 0.548357 7_2:+61105391 Msa1066940:CDS
AACGAATCCGATAACAGGTC+CGG 0.554193 7_2:-61105507 Msa1066930:three_prime_UTR
TACCCTCGCCGGAAAACGCA+AGG 0.556070 7_2:+61105331 Msa1066940:CDS
AAACCTTACTCCAACAGCTC+CGG 0.559785 7_2:-61106289 Msa1066930:three_prime_UTR
CGTCCAGTTCGTCGGTGATG+TGG 0.565416 7_2:-61105355 Msa1066930:three_prime_UTR
TTCCCCAAACAAATTCTCCC+AGG 0.568712 7_2:-61107078 Msa1066930:three_prime_UTR
CAAAAGTTAATAATATAGAC+TGG 0.569675 7_2:+61107153 Msa1066940:three_prime_UTR
CAGCATTAAGGACTTGGAAG+AGG 0.572902 7_2:+61106350 Msa1066940:CDS
TACCTGGGAGAATTTGTTTG+GGG 0.574780 7_2:+61107076 Msa1066940:three_prime_UTR
TACTCTTGCCAAATGCAACA+AGG 0.584301 7_2:-61107039 Msa1066930:three_prime_UTR
TAAGAGAATACACTTCTACC+TGG 0.584708 7_2:+61107060 Msa1066940:three_prime_UTR
ATCCATCTTGGTTAAATCAG+CGG 0.590655 7_2:-61105447 Msa1066930:three_prime_UTR
TGTAATAATAGAAATTCTCA+AGG 0.593072 7_2:+61107214 Msa1066940:three_prime_UTR
AATAAGCTGAATCCTGGGGT+TGG 0.595384 7_2:+61107347 Msa1066940:three_prime_UTR
AAGAGAATACACTTCTACCT+GGG 0.598107 7_2:+61107061 Msa1066940:three_prime_UTR
GATGATGATTGGAAGGAATG+GGG 0.598286 7_2:+61105398 Msa1066940:CDS
TGTTTGGATTAGTGAATTGG+GGG 0.603046 7_2:-61107404 Msa1066930:intron
TGAATGAGTTCATCTAGGGA+TGG 0.611085 7_2:-61106792 Msa1066930:three_prime_UTR
CAAAGACACGCCACAACCAA+AGG 0.612425 7_2:+61105191 None:intergenic
CGCATATGAGATTAAAATGG+GGG 0.612833 7_2:+61106743 Msa1066940:CDS
AGCAGATAATGCTAGTCCAG+AGG 0.613968 7_2:+61106839 Msa1066940:CDS
GGACGACGTGTTCGACGATG+AGG 0.631613 7_2:+61105373 Msa1066940:CDS
CGACGTGTTCGACGATGAGG+AGG 0.640320 7_2:+61105376 Msa1066940:CDS
AAATCAGCGGGAGTGAAAGA+GGG 0.642642 7_2:-61105434 Msa1066930:three_prime_UTR
GAACACGTCGTCCAGTTCGT+CGG 0.646781 7_2:-61105363 Msa1066930:three_prime_UTR
GCGGGAGTGAAAGAGGGTGA+AGG 0.647627 7_2:-61105428 Msa1066930:three_prime_UTR
GAGATGATGAAACGCCACAC+CGG 0.658134 7_2:+61105488 Msa1066940:CDS
ATCCGATAACAGGTCCGGTG+TGG 0.660427 7_2:-61105502 Msa1066930:three_prime_UTR
GATCAATAAGCTGAATCCTG+GGG 0.681696 7_2:+61107343 Msa1066940:three_prime_UTR
GGATGAATCGAAGATCAAAG+AGG 0.685829 7_2:+61105466 Msa1066940:CDS
ACGCATATGAGATTAAAATG+GGG 0.696898 7_2:+61106742 Msa1066940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTAAATTAAGAAAAAAA+AGG - chr7_2:61105639-61105658 Msa1066930:intron 10.0%
!! TAATTAATAATTGTTAAACT+TGG - chr7_2:61107431-61107450 Msa1066930:intron 10.0%
!! AACTTAAATTAAGAAAAAAA+AGG - chr7_2:61105639-61105658 Msa1066930:intron 10.0%
!! TAATTAATAATTGTTAAACT+TGG - chr7_2:61107431-61107450 Msa1066930:intron 10.0%
!! TCGAAAAAAAAATGTAAAAA+TGG - chr7_2:61106388-61106407 Msa1066930:intron 15.0%
!! AAAACAGAATTATAGTTAAA+CGG + chr7_2:61106879-61106898 Msa1066940:exon 15.0%
!!! AATTGTATCACTTTTTTAAA+CGG + chr7_2:61106936-61106955 Msa1066940:three_prime_UTR 15.0%
!! TTGTTTATGTATAAATAAGA+TGG + chr7_2:61107245-61107264 Msa1066940:three_prime_UTR 15.0%
!! TCGAAAAAAAAATGTAAAAA+TGG - chr7_2:61106388-61106407 Msa1066930:intron 15.0%
!! AAAACAGAATTATAGTTAAA+CGG + chr7_2:61106879-61106898 Msa1066940:exon 15.0%
!!! AATTGTATCACTTTTTTAAA+CGG + chr7_2:61106936-61106955 Msa1066940:three_prime_UTR 15.0%
!! TTGTTTATGTATAAATAAGA+TGG + chr7_2:61107245-61107264 Msa1066940:three_prime_UTR 15.0%
!!! TGATTATTACTATTTTTTGC+TGG + chr7_2:61105592-61105611 Msa1066940:intron 20.0%
!!! TTTTTACTTGTTATGAATGA+TGG + chr7_2:61105669-61105688 Msa1066940:intron 20.0%
!!! TTTTACTTGTTATGAATGAT+GGG + chr7_2:61105670-61105689 Msa1066940:intron 20.0%
!! TAACAAAAAACTCAGTAAAA+GGG - chr7_2:61105837-61105856 Msa1066930:intron 20.0%
!! ATAACAAAAAACTCAGTAAA+AGG - chr7_2:61105838-61105857 Msa1066930:intron 20.0%
!! ATAACAAGATAAAAACTATG+AGG - chr7_2:61105934-61105953 Msa1066930:intron 20.0%
!!! ATACTCTTTTTAGTACTTAT+TGG + chr7_2:61105994-61106013 Msa1066940:intron 20.0%
!! TACTTCATTTAATCTTTCAA+CGG - chr7_2:61106101-61106120 Msa1066930:intron 20.0%
!!! AATTTTTCGTGTTTGATTTT+AGG + chr7_2:61106221-61106240 Msa1066940:intron 20.0%
!!! TGATTTATGATAAGACATTT+TGG + chr7_2:61106448-61106467 Msa1066940:intron 20.0%
!! ATCGTAAAAATAATAACAGT+AGG - chr7_2:61106968-61106987 Msa1066930:three_prime_UTR 20.0%
!!! CAGTCTATATTATTAACTTT+TGG - chr7_2:61107155-61107174 Msa1066930:three_prime_UTR 20.0%
!! CAAAAGTTAATAATATAGAC+TGG + chr7_2:61107153-61107172 Msa1066940:three_prime_UTR 20.0%
!! TTAATAATATAGACTGGAAA+TGG + chr7_2:61107159-61107178 Msa1066940:three_prime_UTR 20.0%
!! TGTAATAATAGAAATTCTCA+AGG + chr7_2:61107214-61107233 Msa1066940:three_prime_UTR 20.0%
!!! TGATTATTACTATTTTTTGC+TGG + chr7_2:61105592-61105611 Msa1066940:intron 20.0%
!!! TTTTTACTTGTTATGAATGA+TGG + chr7_2:61105669-61105688 Msa1066940:intron 20.0%
!!! TTTTACTTGTTATGAATGAT+GGG + chr7_2:61105670-61105689 Msa1066940:intron 20.0%
!! TAACAAAAAACTCAGTAAAA+GGG - chr7_2:61105837-61105856 Msa1066930:intron 20.0%
!! ATAACAAAAAACTCAGTAAA+AGG - chr7_2:61105838-61105857 Msa1066930:intron 20.0%
!! ATAACAAGATAAAAACTATG+AGG - chr7_2:61105934-61105953 Msa1066930:intron 20.0%
!!! ATACTCTTTTTAGTACTTAT+TGG + chr7_2:61105994-61106013 Msa1066940:intron 20.0%
!! TACTTCATTTAATCTTTCAA+CGG - chr7_2:61106101-61106120 Msa1066930:intron 20.0%
!!! AATTTTTCGTGTTTGATTTT+AGG + chr7_2:61106221-61106240 Msa1066940:intron 20.0%
!!! TGATTTATGATAAGACATTT+TGG + chr7_2:61106448-61106467 Msa1066940:intron 20.0%
!! ATCGTAAAAATAATAACAGT+AGG - chr7_2:61106968-61106987 Msa1066930:three_prime_UTR 20.0%
!!! CAGTCTATATTATTAACTTT+TGG - chr7_2:61107155-61107174 Msa1066930:three_prime_UTR 20.0%
!! CAAAAGTTAATAATATAGAC+TGG + chr7_2:61107153-61107172 Msa1066940:three_prime_UTR 20.0%
!! TTAATAATATAGACTGGAAA+TGG + chr7_2:61107159-61107178 Msa1066940:three_prime_UTR 20.0%
!! TGTAATAATAGAAATTCTCA+AGG + chr7_2:61107214-61107233 Msa1066940:three_prime_UTR 20.0%
! AAATTACAAAATGTGGTTAC+CGG - chr7_2:61105560-61105579 Msa1066930:intron 25.0%
! TCAACTCAAATTACAAAATG+TGG - chr7_2:61105567-61105586 Msa1066930:intron 25.0%
! ATAAAAAAACTAGCTCCAAT+TGG + chr7_2:61105794-61105813 Msa1066940:intron 25.0%
! GTTTATGCTAATTTCCAAAT+TGG + chr7_2:61105874-61105893 Msa1066940:intron 25.0%
! AAGTTGAATTTATCCACTTT+GGG - chr7_2:61105909-61105928 Msa1066930:intron 25.0%
! AAAGTTGAATTTATCCACTT+TGG - chr7_2:61105910-61105929 Msa1066930:intron 25.0%
! ACTTCATTTAATCTTTCAAC+GGG - chr7_2:61106100-61106119 Msa1066930:intron 25.0%
! AGATTAAATGAAGTAACAAG+AGG + chr7_2:61106106-61106125 Msa1066940:intron 25.0%
! GAATACAATCATGTTCAATA+TGG + chr7_2:61106326-61106345 Msa1066940:CDS 25.0%
! ATCAAAATCTTTCACAAACT+AGG - chr7_2:61106506-61106525 Msa1066930:intron 25.0%
! TTTATATTATGTTCTTCACC+TGG + chr7_2:61106529-61106548 Msa1066940:intron 25.0%
! TTTCTTCACTAGCATTTAAA+TGG + chr7_2:61106997-61107016 Msa1066940:three_prime_UTR 25.0%
! AATTGTTAAACTTGGTTGTT+TGG - chr7_2:61107423-61107442 Msa1066930:intron 25.0%
! AAATTACAAAATGTGGTTAC+CGG - chr7_2:61105560-61105579 Msa1066930:intron 25.0%
! TCAACTCAAATTACAAAATG+TGG - chr7_2:61105567-61105586 Msa1066930:intron 25.0%
! ATAAAAAAACTAGCTCCAAT+TGG + chr7_2:61105794-61105813 Msa1066940:intron 25.0%
! GTTTATGCTAATTTCCAAAT+TGG + chr7_2:61105874-61105893 Msa1066940:intron 25.0%
! AAGTTGAATTTATCCACTTT+GGG - chr7_2:61105909-61105928 Msa1066930:intron 25.0%
! AAAGTTGAATTTATCCACTT+TGG - chr7_2:61105910-61105929 Msa1066930:intron 25.0%
! ACTTCATTTAATCTTTCAAC+GGG - chr7_2:61106100-61106119 Msa1066930:intron 25.0%
! AGATTAAATGAAGTAACAAG+AGG + chr7_2:61106106-61106125 Msa1066940:intron 25.0%
! GAATACAATCATGTTCAATA+TGG + chr7_2:61106326-61106345 Msa1066940:CDS 25.0%
! ATCAAAATCTTTCACAAACT+AGG - chr7_2:61106506-61106525 Msa1066930:intron 25.0%
! TTTATATTATGTTCTTCACC+TGG + chr7_2:61106529-61106548 Msa1066940:intron 25.0%
! TTTCTTCACTAGCATTTAAA+TGG + chr7_2:61106997-61107016 Msa1066940:three_prime_UTR 25.0%
! AATTGTTAAACTTGGTTGTT+TGG - chr7_2:61107423-61107442 Msa1066930:intron 25.0%
!!! TACTGTTTTTTGAAGTAGAG+AGG + chr7_2:61106167-61106186 Msa1066940:intron 30.0%
TCAAACACGAAAAATTGCAA+TGG - chr7_2:61106217-61106236 Msa1066930:intron 30.0%
CGATCATAAAGAACTAAGAA+TGG + chr7_2:61106405-61106424 Msa1066940:intron 30.0%
TATCTTTATATTCAGCCTAG+AGG + chr7_2:61106616-61106635 Msa1066940:intron 30.0%
ACAAAATTACTACTTCCTCT+AGG - chr7_2:61106634-61106653 Msa1066930:intron 30.0%
AGACGCATATGAGATTAAAA+TGG + chr7_2:61106740-61106759 Msa1066940:CDS 30.0%
GACGCATATGAGATTAAAAT+GGG + chr7_2:61106741-61106760 Msa1066940:CDS 30.0%
ACGCATATGAGATTAAAATG+GGG + chr7_2:61106742-61106761 Msa1066940:CDS 30.0%
! AACTTTTGGCAATGATAATC+TGG - chr7_2:61107141-61107160 Msa1066930:three_prime_UTR 30.0%
!! TTGTTTGGATTAGTGAATTG+GGG - chr7_2:61107408-61107427 Msa1066930:intron 30.0%
!! GTTGTTTGGATTAGTGAATT+GGG - chr7_2:61107409-61107428 Msa1066930:intron 30.0%
!!! TACTGTTTTTTGAAGTAGAG+AGG + chr7_2:61106167-61106186 Msa1066940:intron 30.0%
TCAAACACGAAAAATTGCAA+TGG - chr7_2:61106217-61106236 Msa1066930:intron 30.0%
CGATCATAAAGAACTAAGAA+TGG + chr7_2:61106405-61106424 Msa1066940:intron 30.0%
TATCTTTATATTCAGCCTAG+AGG + chr7_2:61106616-61106635 Msa1066940:intron 30.0%
ACAAAATTACTACTTCCTCT+AGG - chr7_2:61106634-61106653 Msa1066930:intron 30.0%
AGACGCATATGAGATTAAAA+TGG + chr7_2:61106740-61106759 Msa1066940:CDS 30.0%
GACGCATATGAGATTAAAAT+GGG + chr7_2:61106741-61106760 Msa1066940:CDS 30.0%
ACGCATATGAGATTAAAATG+GGG + chr7_2:61106742-61106761 Msa1066940:CDS 30.0%
! AACTTTTGGCAATGATAATC+TGG - chr7_2:61107141-61107160 Msa1066930:three_prime_UTR 30.0%
!! TTGTTTGGATTAGTGAATTG+GGG - chr7_2:61107408-61107427 Msa1066930:intron 30.0%
!! GTTGTTTGGATTAGTGAATT+GGG - chr7_2:61107409-61107428 Msa1066930:intron 30.0%
ACTTCATGCAATTATGCCTT+TGG - chr7_2:61105210-61105229 Msa1066930:three_prime_UTR 35.0%
TAGGGAGATTAGAAGAAGAA+GGG - chr7_2:61105300-61105319 Msa1066930:three_prime_UTR 35.0%
TTAGGGAGATTAGAAGAAGA+AGG - chr7_2:61105301-61105320 Msa1066930:three_prime_UTR 35.0%
GAGGGTAAAATGGGAATTTA+GGG - chr7_2:61105318-61105337 Msa1066930:three_prime_UTR 35.0%
ATCCATCTTGGTTAAATCAG+CGG - chr7_2:61105450-61105469 Msa1066930:three_prime_UTR 35.0%
! CTTTTTCTTTGACAGCACAT+TGG - chr7_2:61105967-61105986 Msa1066930:intron 35.0%
TGCTGTCAAAGAAAAAGTCT+AGG + chr7_2:61105970-61105989 Msa1066940:intron 35.0%
GCTGTCAAAGAAAAAGTCTA+GGG + chr7_2:61105971-61105990 Msa1066940:intron 35.0%
!! TTTTGACATGTGCTTGTTGA+TGG + chr7_2:61106138-61106157 Msa1066940:intron 35.0%
!!! TCGTGTTTGATTTTAGGACA+AGG + chr7_2:61106227-61106246 Msa1066940:intron 35.0%
GTTCAATATGGACAGCATTA+AGG + chr7_2:61106338-61106357 Msa1066940:CDS 35.0%
AATCTTTCACAAACTAGGTG+AGG - chr7_2:61106501-61106520 Msa1066930:intron 35.0%
ATGATGTTGGATTCTGATCA+AGG + chr7_2:61106559-61106578 Msa1066940:intron 35.0%
ACAGCAAGCAACATAAACTA+AGG - chr7_2:61106661-61106680 Msa1066930:intron 35.0%
CTTATCATGTCAACAGTTGA+AGG + chr7_2:61106698-61106717 Msa1066940:intron 35.0%
TAATCTCATATGCGTCTGAT+TGG - chr7_2:61106737-61106756 Msa1066930:three_prime_UTR 35.0%
CGCATATGAGATTAAAATGG+GGG + chr7_2:61106743-61106762 Msa1066940:CDS 35.0%
CTTCTGAATGAGTTCATCTA+GGG - chr7_2:61106799-61106818 Msa1066930:three_prime_UTR 35.0%
TAAGAGAATACACTTCTACC+TGG + chr7_2:61107060-61107079 Msa1066940:three_prime_UTR 35.0%
AAGAGAATACACTTCTACCT+GGG + chr7_2:61107061-61107080 Msa1066940:three_prime_UTR 35.0%
AGATCAATAAGCTGAATCCT+GGG + chr7_2:61107342-61107361 Msa1066940:three_prime_UTR 35.0%
!! TGTTTGGATTAGTGAATTGG+GGG - chr7_2:61107407-61107426 Msa1066930:intron 35.0%
!! GGTTGTTTGGATTAGTGAAT+TGG - chr7_2:61107410-61107429 Msa1066930:intron 35.0%
ATGCAATTATGCCTTTGGTT+TGG - chr7_2:61105205-61105224 Msa1066930:three_prime_UTR 35.0%
ACTTCATGCAATTATGCCTT+TGG - chr7_2:61105210-61105229 Msa1066930:three_prime_UTR 35.0%
TAGGGAGATTAGAAGAAGAA+GGG - chr7_2:61105300-61105319 Msa1066930:three_prime_UTR 35.0%
TTAGGGAGATTAGAAGAAGA+AGG - chr7_2:61105301-61105320 Msa1066930:three_prime_UTR 35.0%
GAGGGTAAAATGGGAATTTA+GGG - chr7_2:61105318-61105337 Msa1066930:three_prime_UTR 35.0%
ATCCATCTTGGTTAAATCAG+CGG - chr7_2:61105450-61105469 Msa1066930:three_prime_UTR 35.0%
! CTTTTTCTTTGACAGCACAT+TGG - chr7_2:61105967-61105986 Msa1066930:intron 35.0%
TGCTGTCAAAGAAAAAGTCT+AGG + chr7_2:61105970-61105989 Msa1066940:intron 35.0%
GCTGTCAAAGAAAAAGTCTA+GGG + chr7_2:61105971-61105990 Msa1066940:intron 35.0%
!! TTTTGACATGTGCTTGTTGA+TGG + chr7_2:61106138-61106157 Msa1066940:intron 35.0%
!!! TCGTGTTTGATTTTAGGACA+AGG + chr7_2:61106227-61106246 Msa1066940:intron 35.0%
GTTCAATATGGACAGCATTA+AGG + chr7_2:61106338-61106357 Msa1066940:CDS 35.0%
AATCTTTCACAAACTAGGTG+AGG - chr7_2:61106501-61106520 Msa1066930:intron 35.0%
ATGATGTTGGATTCTGATCA+AGG + chr7_2:61106559-61106578 Msa1066940:intron 35.0%
ACAGCAAGCAACATAAACTA+AGG - chr7_2:61106661-61106680 Msa1066930:intron 35.0%
CTTATCATGTCAACAGTTGA+AGG + chr7_2:61106698-61106717 Msa1066940:intron 35.0%
TAATCTCATATGCGTCTGAT+TGG - chr7_2:61106737-61106756 Msa1066930:three_prime_UTR 35.0%
CGCATATGAGATTAAAATGG+GGG + chr7_2:61106743-61106762 Msa1066940:CDS 35.0%
CTTCTGAATGAGTTCATCTA+GGG - chr7_2:61106799-61106818 Msa1066930:three_prime_UTR 35.0%
TAAGAGAATACACTTCTACC+TGG + chr7_2:61107060-61107079 Msa1066940:three_prime_UTR 35.0%
AAGAGAATACACTTCTACCT+GGG + chr7_2:61107061-61107080 Msa1066940:three_prime_UTR 35.0%
AGATCAATAAGCTGAATCCT+GGG + chr7_2:61107342-61107361 Msa1066940:three_prime_UTR 35.0%
!! TGTTTGGATTAGTGAATTGG+GGG - chr7_2:61107407-61107426 Msa1066930:intron 35.0%
!! GGTTGTTTGGATTAGTGAAT+TGG - chr7_2:61107410-61107429 Msa1066930:intron 35.0%
CGAGGGTAAAATGGGAATTT+AGG - chr7_2:61105319-61105338 Msa1066930:three_prime_UTR 40.0%
AGGATGATGATTGGAAGGAA+TGG + chr7_2:61105396-61105415 Msa1066940:CDS 40.0%
GGATGATGATTGGAAGGAAT+GGG + chr7_2:61105397-61105416 Msa1066940:CDS 40.0%
GATGATGATTGGAAGGAATG+GGG + chr7_2:61105398-61105417 Msa1066940:CDS 40.0%
TCCATCTTGGTTAAATCAGC+GGG - chr7_2:61105449-61105468 Msa1066930:three_prime_UTR 40.0%
GATCTTCGATTCATCCATCT+TGG - chr7_2:61105462-61105481 Msa1066930:three_prime_UTR 40.0%
GGATGAATCGAAGATCAAAG+AGG + chr7_2:61105466-61105485 Msa1066940:CDS 40.0%
AGCTTAACGAATCCGATAAC+AGG - chr7_2:61105515-61105534 Msa1066930:three_prime_UTR 40.0%
AAACCACAGCTTCAACCAAT+TGG - chr7_2:61105812-61105831 Msa1066930:intron 40.0%
!! TGAAGTAACAAGAGGTGCTT+AGG + chr7_2:61106114-61106133 Msa1066940:intron 40.0%
TAGCTGAACTTGCCATGAAA+TGG + chr7_2:61106250-61106269 Msa1066940:CDS 40.0%
AAGAACGTGTGTCCATTTCA+TGG - chr7_2:61106265-61106284 Msa1066930:three_prime_UTR 40.0%
TATGGACAGCATTAAGGACT+TGG + chr7_2:61106344-61106363 Msa1066940:CDS 40.0%
TGAATGAGTTCATCTAGGGA+TGG - chr7_2:61106795-61106814 Msa1066930:three_prime_UTR 40.0%
GCTTCTGAATGAGTTCATCT+AGG - chr7_2:61106800-61106819 Msa1066930:three_prime_UTR 40.0%
GAATTTCCATCAACTTCCTC+TGG - chr7_2:61106858-61106877 Msa1066930:three_prime_UTR 40.0%
TGCTTTATCTCAACGTCTAG+AGG - chr7_2:61106917-61106936 Msa1066930:three_prime_UTR 40.0%
!! CAATCAAGCCTTGTTGCATT+TGG + chr7_2:61107031-61107050 Msa1066940:three_prime_UTR 40.0%
TACTCTTGCCAAATGCAACA+AGG - chr7_2:61107042-61107061 Msa1066930:three_prime_UTR 40.0%
! TCTACCTGGGAGAATTTGTT+TGG + chr7_2:61107074-61107093 Msa1066940:three_prime_UTR 40.0%
! CTACCTGGGAGAATTTGTTT+GGG + chr7_2:61107075-61107094 Msa1066940:three_prime_UTR 40.0%
! TACCTGGGAGAATTTGTTTG+GGG + chr7_2:61107076-61107095 Msa1066940:three_prime_UTR 40.0%
TCAGTAGCAAGCTGAAATGA+TGG - chr7_2:61107314-61107333 Msa1066930:CDS 40.0%
GAGATCAATAAGCTGAATCC+TGG + chr7_2:61107341-61107360 Msa1066940:three_prime_UTR 40.0%
GATCAATAAGCTGAATCCTG+GGG + chr7_2:61107343-61107362 Msa1066940:three_prime_UTR 40.0%
! TGCTTCATCCCTCTCTTTTT+GGG + chr7_2:61107374-61107393 Msa1066940:three_prime_UTR 40.0%
GTTCAACACCCAAAAAGAGA+GGG - chr7_2:61107385-61107404 Msa1066930:CDS 40.0%
CGAGGGTAAAATGGGAATTT+AGG - chr7_2:61105319-61105338 Msa1066930:three_prime_UTR 40.0%
AGGATGATGATTGGAAGGAA+TGG + chr7_2:61105396-61105415 Msa1066940:CDS 40.0%
GGATGATGATTGGAAGGAAT+GGG + chr7_2:61105397-61105416 Msa1066940:CDS 40.0%
GATGATGATTGGAAGGAATG+GGG + chr7_2:61105398-61105417 Msa1066940:CDS 40.0%
TCCATCTTGGTTAAATCAGC+GGG - chr7_2:61105449-61105468 Msa1066930:three_prime_UTR 40.0%
GATCTTCGATTCATCCATCT+TGG - chr7_2:61105462-61105481 Msa1066930:three_prime_UTR 40.0%
GGATGAATCGAAGATCAAAG+AGG + chr7_2:61105466-61105485 Msa1066940:CDS 40.0%
AGCTTAACGAATCCGATAAC+AGG - chr7_2:61105515-61105534 Msa1066930:three_prime_UTR 40.0%
AAACCACAGCTTCAACCAAT+TGG - chr7_2:61105812-61105831 Msa1066930:intron 40.0%
!! TGAAGTAACAAGAGGTGCTT+AGG + chr7_2:61106114-61106133 Msa1066940:intron 40.0%
TAGCTGAACTTGCCATGAAA+TGG + chr7_2:61106250-61106269 Msa1066940:CDS 40.0%
AAGAACGTGTGTCCATTTCA+TGG - chr7_2:61106265-61106284 Msa1066930:three_prime_UTR 40.0%
TATGGACAGCATTAAGGACT+TGG + chr7_2:61106344-61106363 Msa1066940:CDS 40.0%
TGAATGAGTTCATCTAGGGA+TGG - chr7_2:61106795-61106814 Msa1066930:three_prime_UTR 40.0%
GCTTCTGAATGAGTTCATCT+AGG - chr7_2:61106800-61106819 Msa1066930:three_prime_UTR 40.0%
GAATTTCCATCAACTTCCTC+TGG - chr7_2:61106858-61106877 Msa1066930:three_prime_UTR 40.0%
TGCTTTATCTCAACGTCTAG+AGG - chr7_2:61106917-61106936 Msa1066930:three_prime_UTR 40.0%
!! CAATCAAGCCTTGTTGCATT+TGG + chr7_2:61107031-61107050 Msa1066940:three_prime_UTR 40.0%
TACTCTTGCCAAATGCAACA+AGG - chr7_2:61107042-61107061 Msa1066930:three_prime_UTR 40.0%
! TCTACCTGGGAGAATTTGTT+TGG + chr7_2:61107074-61107093 Msa1066940:three_prime_UTR 40.0%
! CTACCTGGGAGAATTTGTTT+GGG + chr7_2:61107075-61107094 Msa1066940:three_prime_UTR 40.0%
! TACCTGGGAGAATTTGTTTG+GGG + chr7_2:61107076-61107095 Msa1066940:three_prime_UTR 40.0%
TCAGTAGCAAGCTGAAATGA+TGG - chr7_2:61107314-61107333 Msa1066930:CDS 40.0%
GAGATCAATAAGCTGAATCC+TGG + chr7_2:61107341-61107360 Msa1066940:three_prime_UTR 40.0%
GATCAATAAGCTGAATCCTG+GGG + chr7_2:61107343-61107362 Msa1066940:three_prime_UTR 40.0%
! TGCTTCATCCCTCTCTTTTT+GGG + chr7_2:61107374-61107393 Msa1066940:three_prime_UTR 40.0%
GTTCAACACCCAAAAAGAGA+GGG - chr7_2:61107385-61107404 Msa1066930:CDS 40.0%
! AATTCCCATTTTACCCTCGC+CGG + chr7_2:61105320-61105339 Msa1066940:CDS 45.0%
! TTTTCCGGCGAGGGTAAAAT+GGG - chr7_2:61105327-61105346 Msa1066930:three_prime_UTR 45.0%
ACGATGAGGAGGATGATGAT+TGG + chr7_2:61105387-61105406 Msa1066940:CDS 45.0%
TGAGGAGGATGATGATTGGA+AGG + chr7_2:61105391-61105410 Msa1066940:CDS 45.0%
AAATCAGCGGGAGTGAAAGA+GGG - chr7_2:61105437-61105456 Msa1066930:three_prime_UTR 45.0%
TAAATCAGCGGGAGTGAAAG+AGG - chr7_2:61105438-61105457 Msa1066930:three_prime_UTR 45.0%
!! TCCCGCTGATTTAACCAAGA+TGG + chr7_2:61105445-61105464 Msa1066940:CDS 45.0%
AACGAATCCGATAACAGGTC+CGG - chr7_2:61105510-61105529 Msa1066930:three_prime_UTR 45.0%
GGATTCGTTAAGCTCCGATT+TGG + chr7_2:61105521-61105540 Msa1066940:CDS 45.0%
AAAATGTGGTTACCGGAGTC+CGG - chr7_2:61105553-61105572 Msa1066930:intron 45.0%
TGGACACACGTTCTTAGAAC+CGG + chr7_2:61106270-61106289 Msa1066940:CDS 45.0%
AAACCTTACTCCAACAGCTC+CGG - chr7_2:61106292-61106311 Msa1066930:three_prime_UTR 45.0%
GCTGTTGGAGTAAGGTTTAC+AGG + chr7_2:61106294-61106313 Msa1066940:CDS 45.0%
CAGCATTAAGGACTTGGAAG+AGG + chr7_2:61106350-61106369 Msa1066940:CDS 45.0%
ACCTGGCTGTCAAATGATGT+TGG + chr7_2:61106546-61106565 Msa1066940:intron 45.0%
TCCAACATCATTTGACAGCC+AGG - chr7_2:61106550-61106569 Msa1066930:intron 45.0%
!!! GAGCAACTTTTTCGAAGACC+CGG + chr7_2:61106765-61106784 Msa1066940:CDS 45.0%
TTCATCTAGGGATGGATCTC+CGG - chr7_2:61106787-61106806 Msa1066930:three_prime_UTR 45.0%
AGCAGATAATGCTAGTCCAG+AGG + chr7_2:61106839-61106858 Msa1066940:CDS 45.0%
TTCCCCAAACAAATTCTCCC+AGG - chr7_2:61107081-61107100 Msa1066930:three_prime_UTR 45.0%
AATAAGCTGAATCCTGGGGT+TGG + chr7_2:61107347-61107366 Msa1066940:three_prime_UTR 45.0%
! CTGCTTCATCCCTCTCTTTT+TGG + chr7_2:61107373-61107392 Msa1066940:three_prime_UTR 45.0%
GGTTCAACACCCAAAAAGAG+AGG - chr7_2:61107386-61107405 Msa1066930:CDS 45.0%
! AATTCCCATTTTACCCTCGC+CGG + chr7_2:61105320-61105339 Msa1066940:CDS 45.0%
! TTTTCCGGCGAGGGTAAAAT+GGG - chr7_2:61105327-61105346 Msa1066930:three_prime_UTR 45.0%
ACGATGAGGAGGATGATGAT+TGG + chr7_2:61105387-61105406 Msa1066940:CDS 45.0%
TGAGGAGGATGATGATTGGA+AGG + chr7_2:61105391-61105410 Msa1066940:CDS 45.0%
AAATCAGCGGGAGTGAAAGA+GGG - chr7_2:61105437-61105456 Msa1066930:three_prime_UTR 45.0%
TAAATCAGCGGGAGTGAAAG+AGG - chr7_2:61105438-61105457 Msa1066930:three_prime_UTR 45.0%
!! TCCCGCTGATTTAACCAAGA+TGG + chr7_2:61105445-61105464 Msa1066940:CDS 45.0%
AACGAATCCGATAACAGGTC+CGG - chr7_2:61105510-61105529 Msa1066930:three_prime_UTR 45.0%
GGATTCGTTAAGCTCCGATT+TGG + chr7_2:61105521-61105540 Msa1066940:CDS 45.0%
AAAATGTGGTTACCGGAGTC+CGG - chr7_2:61105553-61105572 Msa1066930:intron 45.0%
TGGACACACGTTCTTAGAAC+CGG + chr7_2:61106270-61106289 Msa1066940:CDS 45.0%
AAACCTTACTCCAACAGCTC+CGG - chr7_2:61106292-61106311 Msa1066930:three_prime_UTR 45.0%
GCTGTTGGAGTAAGGTTTAC+AGG + chr7_2:61106294-61106313 Msa1066940:CDS 45.0%
CAGCATTAAGGACTTGGAAG+AGG + chr7_2:61106350-61106369 Msa1066940:CDS 45.0%
ACCTGGCTGTCAAATGATGT+TGG + chr7_2:61106546-61106565 Msa1066940:intron 45.0%
TCCAACATCATTTGACAGCC+AGG - chr7_2:61106550-61106569 Msa1066930:intron 45.0%
!!! GAGCAACTTTTTCGAAGACC+CGG + chr7_2:61106765-61106784 Msa1066940:CDS 45.0%
TTCATCTAGGGATGGATCTC+CGG - chr7_2:61106787-61106806 Msa1066930:three_prime_UTR 45.0%
AGCAGATAATGCTAGTCCAG+AGG + chr7_2:61106839-61106858 Msa1066940:CDS 45.0%
TTCCCCAAACAAATTCTCCC+AGG - chr7_2:61107081-61107100 Msa1066930:three_prime_UTR 45.0%
AATAAGCTGAATCCTGGGGT+TGG + chr7_2:61107347-61107366 Msa1066940:three_prime_UTR 45.0%
! CTGCTTCATCCCTCTCTTTT+TGG + chr7_2:61107373-61107392 Msa1066940:three_prime_UTR 45.0%
GGTTCAACACCCAAAAAGAG+AGG - chr7_2:61107386-61107405 Msa1066930:CDS 45.0%
! GTTTTCCGGCGAGGGTAAAA+TGG - chr7_2:61105328-61105347 Msa1066930:three_prime_UTR 50.0%
! GATGTGGACCTTGCGTTTTC+CGG - chr7_2:61105342-61105361 Msa1066930:three_prime_UTR 50.0%
GAGATGATGAAACGCCACAC+CGG + chr7_2:61105488-61105507 Msa1066940:CDS 50.0%
GCTCCAATTGGTTGAAGCTG+TGG + chr7_2:61105806-61105825 Msa1066940:intron 50.0%
TTGGGCGACACGATCCAATT+TGG - chr7_2:61105891-61105910 Msa1066930:intron 50.0%
GTTCTTAGAACCGGAGCTGT+TGG + chr7_2:61106279-61106298 Msa1066940:CDS 50.0%
! GGACTTGGAAGAGGTACGTA+CGG + chr7_2:61106359-61106378 Msa1066940:intron 50.0%
TCATCTAGGGATGGATCTCC+GGG - chr7_2:61106786-61106805 Msa1066930:three_prime_UTR 50.0%
GCTAGTCCAGAGGAAGTTGA+TGG + chr7_2:61106849-61106868 Msa1066940:CDS 50.0%
! GTTTTCCGGCGAGGGTAAAA+TGG - chr7_2:61105328-61105347 Msa1066930:three_prime_UTR 50.0%
! GATGTGGACCTTGCGTTTTC+CGG - chr7_2:61105342-61105361 Msa1066930:three_prime_UTR 50.0%
GAGATGATGAAACGCCACAC+CGG + chr7_2:61105488-61105507 Msa1066940:CDS 50.0%
GCTCCAATTGGTTGAAGCTG+TGG + chr7_2:61105806-61105825 Msa1066940:intron 50.0%
TTGGGCGACACGATCCAATT+TGG - chr7_2:61105891-61105910 Msa1066930:intron 50.0%
GTTCTTAGAACCGGAGCTGT+TGG + chr7_2:61106279-61106298 Msa1066940:CDS 50.0%
! GGACTTGGAAGAGGTACGTA+CGG + chr7_2:61106359-61106378 Msa1066940:intron 50.0%
TCATCTAGGGATGGATCTCC+GGG - chr7_2:61106786-61106805 Msa1066930:three_prime_UTR 50.0%
GCTAGTCCAGAGGAAGTTGA+TGG + chr7_2:61106849-61106868 Msa1066940:CDS 50.0%
GAACACGTCGTCCAGTTCGT+CGG - chr7_2:61105366-61105385 Msa1066930:three_prime_UTR 55.0%
ATCCGATAACAGGTCCGGTG+TGG - chr7_2:61105505-61105524 Msa1066930:three_prime_UTR 55.0%
!! AGCTCCGATTTGGTGTTCGC+CGG + chr7_2:61105531-61105550 Msa1066940:CDS 55.0%
GAGTCCGGCGAACACCAAAT+CGG - chr7_2:61105538-61105557 Msa1066930:intron 55.0%
!! ATTTGGTGTTCGCCGGACTC+CGG + chr7_2:61105538-61105557 Msa1066940:CDS 55.0%
TTGGATCGTGTCGCCCAAAG+TGG + chr7_2:61105893-61105912 Msa1066940:intron 55.0%
GAACCGGAGCTGTTGGAGTA+AGG + chr7_2:61106286-61106305 Msa1066940:CDS 55.0%
GAACACGTCGTCCAGTTCGT+CGG - chr7_2:61105366-61105385 Msa1066930:three_prime_UTR 55.0%
ATCCGATAACAGGTCCGGTG+TGG - chr7_2:61105505-61105524 Msa1066930:three_prime_UTR 55.0%
!! AGCTCCGATTTGGTGTTCGC+CGG + chr7_2:61105531-61105550 Msa1066940:CDS 55.0%
GAGTCCGGCGAACACCAAAT+CGG - chr7_2:61105538-61105557 Msa1066930:intron 55.0%
!! ATTTGGTGTTCGCCGGACTC+CGG + chr7_2:61105538-61105557 Msa1066940:CDS 55.0%
TTGGATCGTGTCGCCCAAAG+TGG + chr7_2:61105893-61105912 Msa1066940:intron 55.0%
GAACCGGAGCTGTTGGAGTA+AGG + chr7_2:61106286-61106305 Msa1066940:CDS 55.0%
TACCCTCGCCGGAAAACGCA+AGG + chr7_2:61105331-61105350 Msa1066940:CDS 60.0%
! GACCTTGCGTTTTCCGGCGA+GGG - chr7_2:61105336-61105355 Msa1066930:three_prime_UTR 60.0%
GGTCCACATCACCGACGAAC+TGG + chr7_2:61105352-61105371 Msa1066940:CDS 60.0%
CGTCCAGTTCGTCGGTGATG+TGG - chr7_2:61105358-61105377 Msa1066930:three_prime_UTR 60.0%
GGACGACGTGTTCGACGATG+AGG + chr7_2:61105373-61105392 Msa1066940:CDS 60.0%
CGACGTGTTCGACGATGAGG+AGG + chr7_2:61105376-61105395 Msa1066940:CDS 60.0%
GCGGGAGTGAAAGAGGGTGA+AGG - chr7_2:61105431-61105450 Msa1066930:three_prime_UTR 60.0%
CGCCACACCGGACCTGTTAT+CGG + chr7_2:61105500-61105519 Msa1066940:CDS 60.0%
ATGAAGCAGCAGCCAACCCC+AGG - chr7_2:61107362-61107381 Msa1066930:CDS 60.0%
TACCCTCGCCGGAAAACGCA+AGG + chr7_2:61105331-61105350 Msa1066940:CDS 60.0%
! GACCTTGCGTTTTCCGGCGA+GGG - chr7_2:61105336-61105355 Msa1066930:three_prime_UTR 60.0%
GGTCCACATCACCGACGAAC+TGG + chr7_2:61105352-61105371 Msa1066940:CDS 60.0%
CGTCCAGTTCGTCGGTGATG+TGG - chr7_2:61105358-61105377 Msa1066930:three_prime_UTR 60.0%
GGACGACGTGTTCGACGATG+AGG + chr7_2:61105373-61105392 Msa1066940:CDS 60.0%
CGACGTGTTCGACGATGAGG+AGG + chr7_2:61105376-61105395 Msa1066940:CDS 60.0%
GCGGGAGTGAAAGAGGGTGA+AGG - chr7_2:61105431-61105450 Msa1066930:three_prime_UTR 60.0%
CGCCACACCGGACCTGTTAT+CGG + chr7_2:61105500-61105519 Msa1066940:CDS 60.0%
ATGAAGCAGCAGCCAACCCC+AGG - chr7_2:61107362-61107381 Msa1066930:CDS 60.0%
! GGACCTTGCGTTTTCCGGCG+AGG - chr7_2:61105337-61105356 Msa1066930:three_prime_UTR 65.0%
! GGACCTTGCGTTTTCCGGCG+AGG - chr7_2:61105337-61105356 Msa1066930:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 61105205 61107463 61105205 ID=Msa1066940;Name=Msa1066940
chr7_2 mRNA 61105205 61107463 61105205 ID=Msa1066940-mRNA-1;Parent=Msa1066940;Name=Msa1066940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=64|1|1|1|1|1|3|570|199
chr7_2 exon 61105205 61105559 61105205 ID=Msa1066940-mRNA-1:exon:12219;Parent=Msa1066940-mRNA-1
chr7_2 exon 61106243 61106371 61106243 ID=Msa1066940-mRNA-1:exon:12220;Parent=Msa1066940-mRNA-1
chr7_2 exon 61106714 61107463 61106714 ID=Msa1066940-mRNA-1:exon:12221;Parent=Msa1066940-mRNA-1
chr7_2 five_prime_UTR 61105205 61105268 61105205 ID=Msa1066940-mRNA-1:five_prime_utr;Parent=Msa1066940-mRNA-1
chr7_2 CDS 61105269 61105559 61105269 ID=Msa1066940-mRNA-1:cds;Parent=Msa1066940-mRNA-1
chr7_2 CDS 61106243 61106371 61106243 ID=Msa1066940-mRNA-1:cds;Parent=Msa1066940-mRNA-1
chr7_2 CDS 61106714 61106893 61106714 ID=Msa1066940-mRNA-1:cds;Parent=Msa1066940-mRNA-1
chr7_2 three_prime_UTR 61106894 61107463 61106894 ID=Msa1066940-mRNA-1:three_prime_utr;Parent=Msa1066940-mRNA-1
Gene Sequence

>Msa1066940

ATGAACTTAACAACTGTCTTTCTACTCTCCCTTCTTCTTCTAATCTCCCTAAATTCCCATTTTACCCTCGCCGGAAAACGCAAGGTCCACATCACCGACGAACTGGACGACGTGTTCGACGATGAGGAGGATGATGATTGGAAGGAATGGGGCAAGAAACCTTCACCCTCTTTCACTCCCGCTGATTTAACCAAGATGGATGAATCGAAGATCAAAGAGGAGATGATGAAACGCCACACCGGACCTGTTATCGGATTCGTTAAGCTCCGATTTGGTGTTCGCCGGACTCCGGACAAGGTAGCTGAACTTGCCATGAAATGGACACACGTTCTTAGAACCGGAGCTGTTGGAGTAAGGTTTACAGGTGTTGATTTGAATACAATCATGTTCAATATGGACAGCATTAAGGACTTGGAAGAGTTGAAGGAATTTGTCTTCGACCAATCAGACGCATATGAGATTAAAATGGGGGAGCAACTTTTTCGAAGACCCGGAGATCCATCCCTAGATGAACTCATTCAGAAGCATAATAGTGAGAAAGACAAAGCAGATAATGCTAGTCCAGAGGAAGTTGATGGAAATTCGAAAACAGAATTATAG
Protein sequence

>Msa1066940

MNLTTVFLLSLLLLISLNSHFTLAGKRKVHITDELDDVFDDEEDDDWKEWGKKPSPSFTPADLTKMDESKIKEEMMKRHTGPVIGFVKLRFGVRRTPDKVAELAMKWTHVLRTGAVGVRFTGVDLNTIMFNMDSIKDLEELKEFVFDQSDAYEIKMGEQLFRRPGDPSLDELIQKHNSEKDKADNASPEEVDGNSKTEL*