AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1258380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258380 MtrunA17_Chr4g0057771 99.588 243 1 0 1 243 1 243 2.18e-180 494
Msa1258380 MtrunA17_Chr4g0017231 37.559 213 122 4 31 242 89 291 1.20e-42 146
Msa1258380 MtrunA17_Chr2g0305051 37.778 225 123 5 23 243 66 277 1.35e-40 146
Msa1258380 MtrunA17_Chr1g0181801 31.683 202 120 4 31 219 113 309 2.03e-28 110
Msa1258380 MtrunA17_Chr7g0263541 29.703 202 124 4 31 219 38 234 1.69e-24 98.2
Msa1258380 MtrunA17_Chr8g0337051 25.714 210 123 4 32 241 24 200 6.11e-19 82.0
Msa1258380 MtrunA17_Chr5g0428971 27.143 210 120 4 33 242 35 211 4.03e-17 77.4
Msa1258380 MtrunA17_Chr4g0018221 26.667 210 121 4 33 242 58 234 3.70e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1258380 AT5G63400.1 81.743 241 44 0 2 242 6 246 1.65e-152 424
Msa1258380 AT5G50370.1 79.654 231 47 0 2 232 7 237 6.79e-144 402
Msa1258380 AT5G50370.2 82.381 210 37 0 2 211 7 216 5.04e-135 379
Msa1258380 AT5G63400.2 85.000 180 27 0 2 181 6 185 1.63e-116 331
Msa1258380 AT5G35170.2 34.821 224 135 4 21 243 71 284 1.25e-38 141
Msa1258380 AT5G35170.1 34.821 224 135 4 21 243 71 284 1.42e-38 141
Msa1258380 AT5G47840.1 35.047 214 128 4 31 243 66 269 1.59e-36 130
Msa1258380 AT5G47840.2 38.333 180 102 3 31 209 66 237 2.20e-34 124
Msa1258380 AT2G37250.1 30.693 202 122 4 31 219 53 249 4.11e-26 103
Msa1258380 AT2G39270.1 30.603 232 132 6 10 219 38 262 5.61e-25 100
Msa1258380 AT5G26667.3 27.064 218 126 4 25 242 10 194 3.35e-21 88.2
Msa1258380 AT5G26667.2 27.064 218 126 4 25 242 10 194 3.35e-21 88.2
Msa1258380 AT5G26667.4 27.064 218 126 4 25 242 10 194 3.35e-21 88.2
Msa1258380 AT5G26667.1 27.064 218 126 4 25 242 10 194 4.80e-21 88.2
Msa1258380 AT3G60180.1 26.540 211 122 4 32 242 24 201 7.10e-19 82.0
Msa1258380 AT3G60180.2 26.540 211 122 4 32 242 24 201 7.10e-19 82.0
Msa1258380 AT4G25280.1 29.381 194 104 4 33 226 57 217 1.23e-18 82.8
Msa1258380 AT4G25280.2 29.381 194 104 4 33 226 57 217 1.23e-18 82.8

Find 80 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTCCTCCCAAGGTTTC+TGG 0.086280 8_2:-59587157 Msa1258380:CDS
TATTGATTACTATTCGAAAA+AGG 0.219468 8_2:-59585748 Msa1258380:CDS
ATCCTTGAGGAGCGAATTAC+TGG 0.241993 8_2:-59587223 Msa1258380:CDS
AAGAGAAGAGGAGGGTAATT+TGG 0.263670 8_2:+59589683 None:intergenic
TGTGCTTGGACCACAGTTCT+TGG 0.275665 8_2:+59587457 None:intergenic
ACCTCAGATGTCACCTCTTT+GGG 0.277455 8_2:+59585693 None:intergenic
CAGAAAGGTTTCATTCTTGA+TGG 0.304326 8_2:-59587484 Msa1258380:CDS
GACCTCAGATGTCACCTCTT+TGG 0.306316 8_2:+59585692 None:intergenic
TTGCTCCTCCCAAGGTTTCT+GGG 0.328170 8_2:-59587156 Msa1258380:CDS
AATAAGACGTTTGTCAGGTT+TGG 0.344040 8_2:+59589470 None:intergenic
TACCCAGTCGCCAATCATTA+AGG 0.344864 8_2:-59587774 Msa1258380:CDS
TGATGAGATGCTGCAGAAAC+AGG 0.374899 8_2:-59587290 Msa1258380:CDS
TGGTCAAGAAACAATTCATT+TGG 0.377798 8_2:+59585449 None:intergenic
GTTTCTGATGACTTGGTTGT+TGG 0.382058 8_2:-59587541 Msa1258380:CDS
GATGCAGGCCCACCTGGATC+TGG 0.415044 8_2:-59587803 Msa1258380:intron
TTTATACTTTGCGTTAGGTT+GGG 0.426389 8_2:+59589710 None:intergenic
TGCTTATGCCACTTGGCTAC+TGG 0.433342 8_2:-59587743 Msa1258380:CDS
ATTTAAATAAAAGTAGAAAC+TGG 0.437040 8_2:+59585589 None:intergenic
TGGGAGGAGCAAACTTTGTA+TGG 0.440423 8_2:+59587167 None:intergenic
TCATCCTTGCGCTGGATAAG+AGG 0.449192 8_2:+59586579 None:intergenic
TAGAGTTCCCCTTGGACCCT+CGG 0.458256 8_2:-59585651 Msa1258380:three_prime_UTR
ATCCTTAATGATTGGCGACT+GGG 0.472147 8_2:+59587772 None:intergenic
GGTAATGGCGAGTTCTAACT+TGG 0.473036 8_2:-59589550 Msa1258380:exon
GTTTCACAGGCAAACTGAAC+CGG 0.476704 8_2:-59586523 Msa1258380:intron
ATCATCAACCCCAGAAACCT+TGG 0.477570 8_2:+59587147 None:intergenic
AGAGTTCCCCTTGGACCCTC+GGG 0.478030 8_2:-59585650 Msa1258380:three_prime_UTR
AAGACGTTTGTCAGGTTTGG+AGG 0.481705 8_2:+59589473 None:intergenic
AGTTCGATCCCGAGGGTCCA+AGG 0.486880 8_2:+59585642 None:intergenic
AAAAGAGAAAAGAGAAGAGG+AGG 0.487908 8_2:+59589674 None:intergenic
AAAGAGAAAAGAGAAGAGGA+GGG 0.489132 8_2:+59589675 None:intergenic
AAGGCAATACCTTCTGTGCT+TGG 0.492764 8_2:+59587443 None:intergenic
TGGTAGGTTCTGCCACTGGA+TGG 0.498072 8_2:+59587187 None:intergenic
GCATTTGCAGCGAAGTTGAA+AGG 0.498268 8_2:+59585546 None:intergenic
TGCTCCTCCCAAGGTTTCTG+GGG 0.498541 8_2:-59587155 Msa1258380:CDS
CATCCTTAATGATTGGCGAC+TGG 0.500176 8_2:+59587771 None:intergenic
ACGAGAATAAGACGTTTGTC+AGG 0.504583 8_2:+59589465 None:intergenic
CAGTACTCATCCTTAATGAT+TGG 0.508765 8_2:+59587764 None:intergenic
AGCGAAAGAAGCTATGGAAA+AGG 0.511818 8_2:-59587672 Msa1258380:intron
CAAGACTCGAGGCGTTTCAC+AGG 0.520486 8_2:-59586536 Msa1258380:CDS
CTGCAGTGTCATCCTTGCGC+TGG 0.520703 8_2:+59586571 None:intergenic
AGGAGCAAACTTTGTATGGT+AGG 0.522477 8_2:+59587171 None:intergenic
AGAACTTGTTTCTGATGACT+TGG 0.528968 8_2:-59587548 Msa1258380:CDS
GGCCCACCTGGATCTGGAAA+AGG 0.531197 8_2:-59587797 Msa1258380:CDS
CATTTGCAGCGAAGTTGAAA+GGG 0.532507 8_2:+59585547 None:intergenic
GTTCGATCCCGAGGGTCCAA+GGG 0.534041 8_2:+59585643 None:intergenic
TCAGATGTCACCTCTTTGGG+AGG 0.540707 8_2:+59585696 None:intergenic
TACAAAGTTTGCTCCTCCCA+AGG 0.544011 8_2:-59587164 Msa1258380:CDS
TGTATGGTAGGTTCTGCCAC+TGG 0.548293 8_2:+59587183 None:intergenic
TATTAAAGCGAAAGAAGCTA+TGG 0.555441 8_2:-59587678 Msa1258380:CDS
GTAGCAGCTAAAACCCCTCT+TGG 0.556590 8_2:-59587701 Msa1258380:CDS
TCATCAACCCCAGAAACCTT+GGG 0.557308 8_2:+59587148 None:intergenic
CTTTCGCTTTAATACCAAGA+GGG 0.558792 8_2:+59587687 None:intergenic
TGAGTACTGCTTATGCCACT+TGG 0.559219 8_2:-59587750 Msa1258380:CDS
ATTTGAAAACACCTGTGTAA+TGG 0.560439 8_2:+59585429 None:intergenic
TGATTACGAAGACATATACT+TGG 0.565606 8_2:-59589775 Msa1258380:five_prime_UTR
AAGAAACCGTCATGTCAGAA+AGG 0.567615 8_2:-59587499 Msa1258380:CDS
ATGAAACCTTTCTGACATGA+CGG 0.573422 8_2:+59587493 None:intergenic
GACAAACGTCTTATTCTCGT+TGG 0.578794 8_2:-59589462 Msa1258380:intron
AACTGTGGTCCAAGCACAGA+AGG 0.583530 8_2:-59587452 Msa1258380:intron
CAGCAGCACAGCAACGGTAA+TGG 0.585962 8_2:-59589565 Msa1258380:exon
GTCCAGTAATTCGCTCCTCA+AGG 0.587235 8_2:+59587221 None:intergenic
GGTAGGTTCTGCCACTGGAT+GGG 0.601889 8_2:+59587188 None:intergenic
TTTCGCTTTAATACCAAGAG+GGG 0.604617 8_2:+59587688 None:intergenic
TTGTTTCTTGACCATTACAC+AGG 0.611514 8_2:-59585440 Msa1258380:three_prime_UTR
TAAGCAGCAGTTCGATCCCG+AGG 0.618701 8_2:+59585634 None:intergenic
AGGAGCGAATTACTGGACGC+TGG 0.631202 8_2:-59587216 Msa1258380:CDS
AATTGATGACGCAATCCTTG+AGG 0.634543 8_2:-59587236 Msa1258380:CDS
TGAGCCTCTTATCCAGCGCA+AGG 0.634937 8_2:-59586583 Msa1258380:CDS
CGCTGGATACACCCATCCAG+TGG 0.638248 8_2:-59587199 Msa1258380:CDS
TGTCTCAATAGAGTTCCCCT+TGG 0.639790 8_2:-59585659 Msa1258380:exon
TCCCAAAGAGGTGACATCTG+AGG 0.649172 8_2:-59585694 Msa1258380:CDS
GATGAGATGCTGCAGAAACA+GGG 0.659071 8_2:-59587289 Msa1258380:CDS
TTCGATCCCGAGGGTCCAAG+GGG 0.659628 8_2:+59585644 None:intergenic
CTGTCACAGCAGCACAGCAA+CGG 0.660652 8_2:-59589571 Msa1258380:five_prime_UTR
AAGCAGCAGTTCGATCCCGA+GGG 0.667947 8_2:+59585635 None:intergenic
TGTTCTTAAGTCAAGACTCG+AGG 0.677007 8_2:-59586547 Msa1258380:CDS
ACATATCACCAGTAGCCAAG+TGG 0.677362 8_2:+59587735 None:intergenic
TCAGACATGAGATCAACAGA+AGG 0.680744 8_2:+59589519 None:intergenic
TCTTTCGCTTTAATACCAAG+AGG 0.695667 8_2:+59587686 None:intergenic
TCAACCCCAGAAACCTTGGG+AGG 0.711556 8_2:+59587151 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTATTTTTGTATAAT+AGG - chr8_2:59585804-59585823 Msa1258380:intron 10.0%
!!! ATATTAGATTATCTATTTTA+TGG + chr8_2:59587472-59587491 None:intergenic 10.0%
!!! TTTTTTTTGTTTGAAATATT+GGG - chr8_2:59587666-59587685 Msa1258380:intron 10.0%
!! AAATCAATTATAAAGAAAGA+AGG + chr8_2:59586820-59586839 None:intergenic 15.0%
!! ATATTATACTACAAATATTC+AGG - chr8_2:59587488-59587507 Msa1258380:CDS 15.0%
!! TATTATACTACAAATATTCA+GGG - chr8_2:59587489-59587508 Msa1258380:CDS 15.0%
!!! GTTTTTTTTGTTTGAAATAT+TGG - chr8_2:59587665-59587684 Msa1258380:intron 15.0%
!!! GGGAATTTTTTTTTTTTTTT+AGG - chr8_2:59588621-59588640 Msa1258380:intron 15.0%
!!! ATATTTTAAAAACTGATTGT+TGG - chr8_2:59588814-59588833 Msa1258380:intron 15.0%
!! AAACACATAAATAAAAAGAA+AGG + chr8_2:59589226-59589245 None:intergenic 15.0%
!! ATTTAAATAAAAGTAGAAAC+TGG + chr8_2:59589474-59589493 None:intergenic 15.0%
!! AAATAAAAAAGTCATTTGAA+TGG - chr8_2:59589579-59589598 Msa1258380:five_prime_UTR 15.0%
!! CTTAAAAAAAACATAGACAA+TGG + chr8_2:59585773-59585792 None:intergenic 20.0%
!!! CATTGTCTATGTTTTTTTTA+AGG - chr8_2:59585771-59585790 Msa1258380:intron 20.0%
!! AATCTTTACTCTAGATTAAA+AGG + chr8_2:59585959-59585978 None:intergenic 20.0%
!! AAAATGAAGTCCTAAAAAAA+AGG + chr8_2:59586041-59586060 None:intergenic 20.0%
!!! TACAATTACTGATTTTAGTT+AGG - chr8_2:59586087-59586106 Msa1258380:intron 20.0%
!! ATTTATTTCAACTGATATGA+GGG - chr8_2:59586836-59586855 Msa1258380:intron 20.0%
!! TTCCTATAATTTATCGTAAA+TGG - chr8_2:59587087-59587106 Msa1258380:intron 20.0%
!! TCCTATAATTTATCGTAAAT+GGG - chr8_2:59587088-59587107 Msa1258380:intron 20.0%
!!! ATACTGTTAAGGTATTTTAT+TGG - chr8_2:59588307-59588326 Msa1258380:intron 20.0%
!!! TACTGTTAAGGTATTTTATT+GGG - chr8_2:59588308-59588327 Msa1258380:intron 20.0%
!!! ATTGGGAAATTTATTTTGTT+TGG - chr8_2:59588325-59588344 Msa1258380:intron 20.0%
!!! ATATCAATTTTTTCGTTTTC+AGG - chr8_2:59588447-59588466 Msa1258380:intron 20.0%
!! AACATTAATTTCACTGAAAA+TGG + chr8_2:59588576-59588595 None:intergenic 20.0%
!! GATCAACTTCATTTAATTAA+AGG + chr8_2:59588902-59588921 None:intergenic 20.0%
!! TATATAAACTTTCAATCCAA+CGG - chr8_2:59588990-59589009 Msa1258380:intron 20.0%
!! TATATAAACTTTCAATCCAA+CGG - chr8_2:59588990-59589009 Msa1258380:intron 20.0%
!!! TATTGATTACTATTCGAAAA+AGG - chr8_2:59589312-59589331 Msa1258380:intron 20.0%
!! ATTGATTACTATTCGAAAAA+GGG - chr8_2:59589313-59589332 Msa1258380:intron 20.0%
!!! GTATTTTTATACTTTGCGTT+AGG + chr8_2:59585358-59585377 None:intergenic 25.0%
! TAAAAAAGAGAAAAGAGAAG+AGG + chr8_2:59585392-59585411 None:intergenic 25.0%
! TTTAGTTAGATTTCAAACTC+CGG - chr8_2:59585981-59586000 Msa1258380:intron 25.0%
! ACTAAAGTGAATTGTTCAAA+CGG - chr8_2:59586121-59586140 Msa1258380:intron 25.0%
! ATAATGCATTATGAATGTGT+TGG - chr8_2:59586183-59586202 Msa1258380:intron 25.0%
!! TTGTATGATTTTGTGTCTTT+TGG - chr8_2:59586389-59586408 Msa1258380:intron 25.0%
! AACAGAGATTCATACTAATA+AGG + chr8_2:59586478-59586497 None:intergenic 25.0%
!!! ACAATAACAGTTTTGCTATT+TGG - chr8_2:59586566-59586585 Msa1258380:CDS 25.0%
!!! CAATAACAGTTTTGCTATTT+GGG - chr8_2:59586567-59586586 Msa1258380:CDS 25.0%
!! TGAAGTATTACTGTGAATAT+GGG + chr8_2:59586737-59586756 None:intergenic 25.0%
!! TTGAAGTATTACTGTGAATA+TGG + chr8_2:59586738-59586757 None:intergenic 25.0%
! AATACTTCAACCTTTCAATA+TGG - chr8_2:59586748-59586767 Msa1258380:intron 25.0%
! TGAAGCATACAAACAAAAAA+GGG + chr8_2:59586795-59586814 None:intergenic 25.0%
! ATGAAGCATACAAACAAAAA+AGG + chr8_2:59586796-59586815 None:intergenic 25.0%
! GATTTATTTCAACTGATATG+AGG - chr8_2:59586835-59586854 Msa1258380:intron 25.0%
! CTATGTGAAATAGAAAATAG+TGG + chr8_2:59586880-59586899 None:intergenic 25.0%
!! CTATTTTCTATTTCACATAG+CGG - chr8_2:59586880-59586899 Msa1258380:intron 25.0%
!!! TAATTTTAACTCTTGTGTTG+TGG + chr8_2:59587043-59587062 None:intergenic 25.0%
! TCCCATTTACGATAAATTAT+AGG + chr8_2:59587092-59587111 None:intergenic 25.0%
! CATCATTTAGATAACATTCA+TGG + chr8_2:59587180-59587199 None:intergenic 25.0%
! ATATTCTACTTGGAAGAATA+TGG + chr8_2:59587223-59587242 None:intergenic 25.0%
!! TGTTCAAGTTATATTCTACT+TGG + chr8_2:59587233-59587252 None:intergenic 25.0%
! ATCAAGCTGAAAAGAAAAAA+AGG + chr8_2:59587754-59587773 None:intergenic 25.0%
! AATGAACTGAAAGTTATAAC+TGG + chr8_2:59587981-59588000 None:intergenic 25.0%
!! CTTATCAGTTGATCATTTTA+GGG + chr8_2:59588098-59588117 None:intergenic 25.0%
!! ACTTATCAGTTGATCATTTT+AGG + chr8_2:59588099-59588118 None:intergenic 25.0%
! AAATGATCAACTGATAAGTA+TGG - chr8_2:59588100-59588119 Msa1258380:intron 25.0%
!!! GATAAGTATGGACTTTTTTA+CGG - chr8_2:59588112-59588131 Msa1258380:intron 25.0%
!!! GGAAATTTATTTTGTTTGGA+GGG - chr8_2:59588329-59588348 Msa1258380:intron 25.0%
! CTAAAGATAGCATTTAAATG+AGG + chr8_2:59588401-59588420 None:intergenic 25.0%
!! AATTTCACTGAAAATGGATT+GGG + chr8_2:59588570-59588589 None:intergenic 25.0%
! TAATTTCACTGAAAATGGAT+TGG + chr8_2:59588571-59588590 None:intergenic 25.0%
!!! TTTTTTTTAGGCATGTCAAT+TGG - chr8_2:59588633-59588652 Msa1258380:intron 25.0%
! AAAAAAAATACCCTGTGTTT+AGG - chr8_2:59588679-59588698 Msa1258380:intron 25.0%
! AAAAAAATACCCTGTGTTTA+GGG - chr8_2:59588680-59588699 Msa1258380:intron 25.0%
!! TAATTACGTGCAATTTTGAA+TGG - chr8_2:59588741-59588760 Msa1258380:intron 25.0%
!! AATTACGTGCAATTTTGAAT+GGG - chr8_2:59588742-59588761 Msa1258380:intron 25.0%
! TCAGATTACGTAAAAACTTA+CGG + chr8_2:59588868-59588887 None:intergenic 25.0%
!! GAATATAGACAAGAGTTTTA+GGG + chr8_2:59589100-59589119 None:intergenic 25.0%
!! AGAATATAGACAAGAGTTTT+AGG + chr8_2:59589101-59589120 None:intergenic 25.0%
! AATCAATTTCCAATCAAACT+GGG + chr8_2:59589144-59589163 None:intergenic 25.0%
! AAATCAATTTCCAATCAAAC+TGG + chr8_2:59589145-59589164 None:intergenic 25.0%
! TTAATTCTCTACTCATCATT+TGG - chr8_2:59589164-59589183 Msa1258380:intron 25.0%
!! AATCTTAGTTTGAGAAAAAC+TGG + chr8_2:59589539-59589558 None:intergenic 25.0%
!! GTTTTTCTCAAACTAAGATT+TGG - chr8_2:59589539-59589558 Msa1258380:CDS 25.0%
!!! CTTCAATTTTAGTATTACAC+TGG - chr8_2:59589765-59589784 Msa1258380:five_prime_UTR 25.0%
TTTATACTTTGCGTTAGGTT+GGG + chr8_2:59585353-59585372 None:intergenic 30.0%
! TTTTATACTTTGCGTTAGGT+TGG + chr8_2:59585354-59585373 None:intergenic 30.0%
TAAGCAACAAACAGTAAGTT+CGG + chr8_2:59585700-59585719 None:intergenic 30.0%
!!! TATTTTTTGTCTTATCCCTC+CGG - chr8_2:59585916-59585935 Msa1258380:intron 30.0%
!!! TGCTGTTTTGCCTTTTTTTT+AGG - chr8_2:59586028-59586047 Msa1258380:intron 30.0%
!!! GGACTTCATTTTTTGATAGA+TGG - chr8_2:59586049-59586068 Msa1258380:intron 30.0%
!!! CTGATTTTAGTTAGGAGTAA+TGG - chr8_2:59586095-59586114 Msa1258380:intron 30.0%
GTAAAAATTCCTTTGTCTGT+TGG - chr8_2:59586248-59586267 Msa1258380:intron 30.0%
! TTTTGTCTGTGTACTATTAG+TGG - chr8_2:59586327-59586346 Msa1258380:intron 30.0%
! GTATTGTGATTTTCATAGAG+AGG + chr8_2:59586548-59586567 None:intergenic 30.0%
CTATATCAGCTAGTAAAAAC+TGG + chr8_2:59586610-59586629 None:intergenic 30.0%
! GTTTTTACTAGCTGATATAG+CGG - chr8_2:59586610-59586629 Msa1258380:intron 30.0%
! AGTAGAAAAGGGAGAATTTT+TGG - chr8_2:59586637-59586656 Msa1258380:intron 30.0%
! GTTTTTCTATGGTAAACATG+CGG + chr8_2:59586692-59586711 None:intergenic 30.0%
! CTAACTCTTCAGTTTTTCTA+TGG + chr8_2:59586703-59586722 None:intergenic 30.0%
!!! TATTTCACATAGCGGATTTT+TGG - chr8_2:59586888-59586907 Msa1258380:intron 30.0%
! CATTTTACCGTAAAAAGGAA+GGG + chr8_2:59587137-59587156 None:intergenic 30.0%
AATATGGAGAATAACCTAAG+AGG + chr8_2:59587207-59587226 None:intergenic 30.0%
!! TAACTTGAACATTTTGATGC+AGG - chr8_2:59587242-59587261 Msa1258380:CDS 30.0%
TATTAAAGCGAAAGAAGCTA+TGG - chr8_2:59587382-59587401 Msa1258380:intron 30.0%
TGCTATTCTTCTACTAACTA+TGG - chr8_2:59587723-59587742 Msa1258380:CDS 30.0%
AGCTGAAAAGAAAAAAAGGA+AGG + chr8_2:59587750-59587769 None:intergenic 30.0%
AATCATACTTAGATCCAGTT+TGG + chr8_2:59588183-59588202 None:intergenic 30.0%
TGTGAATGTTGAATGAAATG+AGG - chr8_2:59588275-59588294 Msa1258380:intron 30.0%
GGTGCAAAAATATACTGTTA+AGG - chr8_2:59588296-59588315 Msa1258380:intron 30.0%
!!! GGGAAATTTATTTTGTTTGG+AGG - chr8_2:59588328-59588347 Msa1258380:intron 30.0%
TGTCAGTACTTTAGTTAAAG+TGG - chr8_2:59588372-59588391 Msa1258380:intron 30.0%
!!! TTTTTTCGTTTTCAGGTTAC+TGG - chr8_2:59588454-59588473 Msa1258380:intron 30.0%
CTTCAAATATACAGTAGCTT+CGG - chr8_2:59588600-59588619 Msa1258380:intron 30.0%
TTCAAATATACAGTAGCTTC+GGG - chr8_2:59588601-59588620 Msa1258380:intron 30.0%
!!! AACACAGGGTATTTTTTTTC+TGG + chr8_2:59588678-59588697 None:intergenic 30.0%
ATGTATTTACCCTAAACACA+GGG + chr8_2:59588692-59588711 None:intergenic 30.0%
TAGGGTAAATACATGTACTA+TGG - chr8_2:59588698-59588717 Msa1258380:intron 30.0%
AGGGTAAATACATGTACTAT+GGG - chr8_2:59588699-59588718 Msa1258380:intron 30.0%
AATACATGTACTATGGGTAT+TGG - chr8_2:59588705-59588724 Msa1258380:intron 30.0%
ATACATGTACTATGGGTATT+GGG - chr8_2:59588706-59588725 Msa1258380:intron 30.0%
CAAAATTGCACGTAATTACT+TGG + chr8_2:59588739-59588758 None:intergenic 30.0%
TAGTATTAGCAGATATGTGT+GGG + chr8_2:59588772-59588791 None:intergenic 30.0%
TTAGTATTAGCAGATATGTG+TGG + chr8_2:59588773-59588792 None:intergenic 30.0%
! TATTTTACACAATTGACCGT+TGG + chr8_2:59589009-59589028 None:intergenic 30.0%
GTGTGTGTAAAATTGAAACA+AGG + chr8_2:59589202-59589221 None:intergenic 30.0%
!! ATTTTCTTTGTAACTTGTCG+TGG - chr8_2:59589254-59589273 Msa1258380:intron 30.0%
!!! GAACTGCTGCTTATTTTTTT+AGG - chr8_2:59589436-59589455 Msa1258380:intron 30.0%
TGGTCAAGAAACAATTCATT+TGG + chr8_2:59589614-59589633 None:intergenic 30.0%
ATTTGAAAACACCTGTGTAA+TGG + chr8_2:59589634-59589653 None:intergenic 30.0%
AAAGAGAAAAGAGAAGAGGA+GGG + chr8_2:59585388-59585407 None:intergenic 35.0%
AAAAGAGAAAAGAGAAGAGG+AGG + chr8_2:59585389-59585408 None:intergenic 35.0%
AATAAGACGTTTGTCAGGTT+TGG + chr8_2:59585593-59585612 None:intergenic 35.0%
! GAACTTACTGTTTGTTGCTT+AGG - chr8_2:59585699-59585718 Msa1258380:CDS 35.0%
!! GAATGTTGATGCGCTTTTTA+GGG - chr8_2:59585721-59585740 Msa1258380:CDS 35.0%
AACATAGACAATGGACAACA+TGG + chr8_2:59585764-59585783 None:intergenic 35.0%
GCATAAAAAATCGTTCGTTC+AGG + chr8_2:59586011-59586030 None:intergenic 35.0%
AGACAAAACTACAGTTAGCA+AGG + chr8_2:59586315-59586334 None:intergenic 35.0%
GCTAGTAAAAACTGGAATAG+CGG + chr8_2:59586602-59586621 None:intergenic 35.0%
TATAGCGGCAATAGTAGAAA+AGG - chr8_2:59586625-59586644 Msa1258380:intron 35.0%
ATAGCGGCAATAGTAGAAAA+GGG - chr8_2:59586626-59586645 Msa1258380:intron 35.0%
ACCTTTCAATATGGAAGCTA+TGG - chr8_2:59586757-59586776 Msa1258380:intron 35.0%
ACCATAGCTTCCATATTGAA+AGG + chr8_2:59586761-59586780 None:intergenic 35.0%
CATATCAGTGTAATCAACAG+CGG + chr8_2:59586935-59586954 None:intergenic 35.0%
! GTATTCACCCTTCCTTTTTA+CGG - chr8_2:59587127-59587146 Msa1258380:intron 35.0%
! CCATTTTACCGTAAAAAGGA+AGG + chr8_2:59587138-59587157 None:intergenic 35.0%
! CCTTCCTTTTTACGGTAAAA+TGG - chr8_2:59587135-59587154 Msa1258380:intron 35.0%
! TCCTTTTTACGGTAAAATGG+TGG - chr8_2:59587138-59587157 Msa1258380:intron 35.0%
! ACCACCATTTTACCGTAAAA+AGG + chr8_2:59587142-59587161 None:intergenic 35.0%
ATTCATGGACAAAAGAGAAC+AGG + chr8_2:59587165-59587184 None:intergenic 35.0%
CTAAATGATGAGTTCCTCTT+AGG - chr8_2:59587190-59587209 Msa1258380:CDS 35.0%
CAGTACTCATCCTTAATGAT+TGG + chr8_2:59587299-59587318 None:intergenic 35.0%
TTTCGCTTTAATACCAAGAG+GGG + chr8_2:59587375-59587394 None:intergenic 35.0%
CTTTCGCTTTAATACCAAGA+GGG + chr8_2:59587376-59587395 None:intergenic 35.0%
TCTTTCGCTTTAATACCAAG+AGG + chr8_2:59587377-59587396 None:intergenic 35.0%
! TGGAAAAGGTAAGCTCTTTT+TGG - chr8_2:59587402-59587421 Msa1258380:intron 35.0%
! GAGTGAAACAATAAAAGCAC+AGG + chr8_2:59587440-59587459 None:intergenic 35.0%
!! AGAACTTGTTTCTGATGACT+TGG - chr8_2:59587512-59587531 Msa1258380:CDS 35.0%
ATGAAACCTTTCTGACATGA+CGG + chr8_2:59587570-59587589 None:intergenic 35.0%
CAGAAAGGTTTCATTCTTGA+TGG - chr8_2:59587576-59587595 Msa1258380:intron 35.0%
AGTAGTTCAGATGTCAAACA+AGG + chr8_2:59587639-59587658 None:intergenic 35.0%
! ACTGGCAATTAACATTTTGC+AGG + chr8_2:59587963-59587982 None:intergenic 35.0%
!! TCAGTTGATCATTTTAGGGA+GGG + chr8_2:59588094-59588113 None:intergenic 35.0%
!! ATCAGTTGATCATTTTAGGG+AGG + chr8_2:59588095-59588114 None:intergenic 35.0%
!!! AAGTATGGACTTTTTTACGG+TGG - chr8_2:59588115-59588134 Msa1258380:intron 35.0%
TACTTAGATCCAGTTTGGAT+AGG + chr8_2:59588178-59588197 None:intergenic 35.0%
!! TTATTTTGTTTGGAGGGAAC+TGG - chr8_2:59588335-59588354 Msa1258380:intron 35.0%
!! AAATGGATTGGGAATCATAC+CGG + chr8_2:59588559-59588578 None:intergenic 35.0%
TCAATTGGACCCAAATTCAT+TGG - chr8_2:59588648-59588667 Msa1258380:intron 35.0%
CAATTGGACCCAAATTCATT+GGG - chr8_2:59588649-59588668 Msa1258380:intron 35.0%
TCTGGATACCCAATGAATTT+GGG + chr8_2:59588660-59588679 None:intergenic 35.0%
TTCTGGATACCCAATGAATT+TGG + chr8_2:59588661-59588680 None:intergenic 35.0%
CATGTATTTACCCTAAACAC+AGG + chr8_2:59588693-59588712 None:intergenic 35.0%
AGTATTAGCAGATATGTGTG+GGG + chr8_2:59588771-59588790 None:intergenic 35.0%
ATCTTGATGCATCTCAATGA+CGG - chr8_2:59588919-59588938 Msa1258380:intron 35.0%
!!! ATAGACAAGAGTTTTAGGGA+TGG + chr8_2:59589096-59589115 None:intergenic 35.0%
TTGAAACAAGGCCAGAAATT+GGG + chr8_2:59589190-59589209 None:intergenic 35.0%
ATTGAAACAAGGCCAGAAAT+TGG + chr8_2:59589191-59589210 None:intergenic 35.0%
ATTATGTGCAATGAACATGC+AGG - chr8_2:59589288-59589307 Msa1258380:intron 35.0%
! TTGTTTCTTGACCATTACAC+AGG - chr8_2:59589620-59589639 Msa1258380:five_prime_UTR 35.0%
ATCTTGCACAAAAATGTAGC+AGG + chr8_2:59589684-59589703 None:intergenic 35.0%
!! TAGGTTGGGTTTTTCGGATT+CGG + chr8_2:59585339-59585358 None:intergenic 40.0%
!!! TTGCGTTAGGTTGGGTTTTT+CGG + chr8_2:59585345-59585364 None:intergenic 40.0%
AAGAGAAGAGGAGGGTAATT+TGG + chr8_2:59585380-59585399 None:intergenic 40.0%
TCAGACATGAGATCAACAGA+AGG + chr8_2:59585544-59585563 None:intergenic 40.0%
ACGAGAATAAGACGTTTGTC+AGG + chr8_2:59585598-59585617 None:intergenic 40.0%
! GACAAACGTCTTATTCTCGT+TGG - chr8_2:59585598-59585617 Msa1258380:three_prime_UTR 40.0%
AGTAAGTTCGGATCTGAACA+AGG + chr8_2:59585688-59585707 None:intergenic 40.0%
!! GGAATGTTGATGCGCTTTTT+AGG - chr8_2:59585720-59585739 Msa1258380:CDS 40.0%
ATTAAAAGGTTACTTCCCCC+CGG + chr8_2:59585945-59585964 None:intergenic 40.0%
AATCGTTCGTTCAGGATAAC+CGG + chr8_2:59586003-59586022 None:intergenic 40.0%
AGCACAAAACCAACAGACAA+AGG + chr8_2:59586260-59586279 None:intergenic 40.0%
! CTATCACTATGTGCTGCTAT+TGG + chr8_2:59586503-59586522 None:intergenic 40.0%
CACATAGTGATAGAGCATAG+CGG - chr8_2:59586510-59586529 Msa1258380:intron 40.0%
ATAGTGGCACGAGAAAATAG+CGG + chr8_2:59586864-59586883 None:intergenic 40.0%
! CGCTGTTGATTACACTGATA+TGG - chr8_2:59586933-59586952 Msa1258380:intron 40.0%
TCTTGTGTTGTGGCATAAAC+AGG + chr8_2:59587033-59587052 None:intergenic 40.0%
ATCCTTAATGATTGGCGACT+GGG + chr8_2:59587291-59587310 None:intergenic 40.0%
AGCGAAAGAAGCTATGGAAA+AGG - chr8_2:59587388-59587407 Msa1258380:intron 40.0%
!! GTTTCTGATGACTTGGTTGT+TGG - chr8_2:59587519-59587538 Msa1258380:CDS 40.0%
AAGAAACCGTCATGTCAGAA+AGG - chr8_2:59587561-59587580 Msa1258380:intron 40.0%
! TGATGGTTTTCCAAGAACTG+TGG - chr8_2:59587593-59587612 Msa1258380:intron 40.0%
!! AATTGATGACGCAATCCTTG+AGG - chr8_2:59587824-59587843 Msa1258380:intron 40.0%
AGGAGCAAACTTTGTATGGT+AGG + chr8_2:59587892-59587911 None:intergenic 40.0%
TGTTCTTAAGTCAAGACTCG+AGG - chr8_2:59588513-59588532 Msa1258380:intron 40.0%
!!! AGAGTTTTAGGGATGGCAAT+GGG + chr8_2:59589089-59589108 None:intergenic 40.0%
!!! AAGAGTTTTAGGGATGGCAA+TGG + chr8_2:59589090-59589109 None:intergenic 40.0%
TTCCAATCAAACTGGGAAGA+TGG + chr8_2:59589137-59589156 None:intergenic 40.0%
TCATCATTTGGCCCAATTTC+TGG - chr8_2:59589176-59589195 Msa1258380:intron 40.0%
CATTTGCAGCGAAGTTGAAA+GGG + chr8_2:59589516-59589535 None:intergenic 40.0%
!! TTGGGTTTTTCGGATTCGGA+TGG + chr8_2:59585335-59585354 None:intergenic 45.0%
! GGTAATGGCGAGTTCTAACT+TGG - chr8_2:59585510-59585529 Msa1258380:three_prime_UTR 45.0%
AAGACGTTTGTCAGGTTTGG+AGG + chr8_2:59585590-59585609 None:intergenic 45.0%
TTAAAAGGTTACTTCCCCCC+GGG + chr8_2:59585944-59585963 None:intergenic 45.0%
! TACCTTTTCCAGATCCAGGT+GGG + chr8_2:59587268-59587287 None:intergenic 45.0%
TACCCAGTCGCCAATCATTA+AGG - chr8_2:59587286-59587305 Msa1258380:CDS 45.0%
CATCCTTAATGATTGGCGAC+TGG + chr8_2:59587292-59587311 None:intergenic 45.0%
! TGAGTACTGCTTATGCCACT+TGG - chr8_2:59587310-59587329 Msa1258380:intron 45.0%
ACATATCACCAGTAGCCAAG+TGG + chr8_2:59587328-59587347 None:intergenic 45.0%
AAGGCAATACCTTCTGTGCT+TGG + chr8_2:59587620-59587639 None:intergenic 45.0%
TGATGAGATGCTGCAGAAAC+AGG - chr8_2:59587770-59587789 Msa1258380:CDS 45.0%
GATGAGATGCTGCAGAAACA+GGG - chr8_2:59587771-59587790 Msa1258380:CDS 45.0%
ATCCTTGAGGAGCGAATTAC+TGG - chr8_2:59587837-59587856 Msa1258380:intron 45.0%
TGGGAGGAGCAAACTTTGTA+TGG + chr8_2:59587896-59587915 None:intergenic 45.0%
! TACAAAGTTTGCTCCTCCCA+AGG - chr8_2:59587896-59587915 Msa1258380:intron 45.0%
TCATCAACCCCAGAAACCTT+GGG + chr8_2:59587915-59587934 None:intergenic 45.0%
ATCATCAACCCCAGAAACCT+TGG + chr8_2:59587916-59587935 None:intergenic 45.0%
!! GTTGATCATTTTAGGGAGGG+AGG + chr8_2:59588091-59588110 None:intergenic 45.0%
!! GGATAGGCTTTCTAGCTCAT+GGG + chr8_2:59588162-59588181 None:intergenic 45.0%
!! TGGATAGGCTTTCTAGCTCA+TGG + chr8_2:59588163-59588182 None:intergenic 45.0%
GCTAGAAAGCCTATCCAAAC+TGG - chr8_2:59588166-59588185 Msa1258380:intron 45.0%
!! TTTTGTTTGGAGGGAACTGG+TGG - chr8_2:59588338-59588357 Msa1258380:intron 45.0%
GTTTCACAGGCAAACTGAAC+CGG - chr8_2:59588537-59588556 Msa1258380:intron 45.0%
ATGGGTACACAATTGACCGT+TGG + chr8_2:59589071-59589090 None:intergenic 45.0%
!! CTTTGGGAGGTTTTTCAGCA+TGG + chr8_2:59589354-59589373 None:intergenic 45.0%
TGCTGAAAAACCTCCCAAAG+AGG - chr8_2:59589354-59589373 Msa1258380:intron 45.0%
ACCTCAGATGTCACCTCTTT+GGG + chr8_2:59589370-59589389 None:intergenic 45.0%
TGTCTCAATAGAGTTCCCCT+TGG - chr8_2:59589401-59589420 Msa1258380:intron 45.0%
GCATTTGCAGCGAAGTTGAA+AGG + chr8_2:59589517-59589536 None:intergenic 45.0%
!!! TTTTTTATTTTTGTATAATA+GGG - chr8_2:59585805-59585824 Msa1258380:intron 5.0%
! GTACCTTTTCCAGATCCAGG+TGG + chr8_2:59587269-59587288 None:intergenic 50.0%
! TGGGTACCTTTTCCAGATCC+AGG + chr8_2:59587272-59587291 None:intergenic 50.0%
! TGCTTATGCCACTTGGCTAC+TGG - chr8_2:59587317-59587336 Msa1258380:intron 50.0%
GTAGCAGCTAAAACCCCTCT+TGG - chr8_2:59587359-59587378 Msa1258380:intron 50.0%
TGTGCTTGGACCACAGTTCT+TGG + chr8_2:59587606-59587625 None:intergenic 50.0%
AACTGTGGTCCAAGCACAGA+AGG - chr8_2:59587608-59587627 Msa1258380:intron 50.0%
GTCCAGTAATTCGCTCCTCA+AGG + chr8_2:59587842-59587861 None:intergenic 50.0%
TGTATGGTAGGTTCTGCCAC+TGG + chr8_2:59587880-59587899 None:intergenic 50.0%
TTTGCTCCTCCCAAGGTTTC+TGG - chr8_2:59587903-59587922 Msa1258380:intron 50.0%
TTGCTCCTCCCAAGGTTTCT+GGG - chr8_2:59587904-59587923 Msa1258380:intron 50.0%
CTAGCTCATGGGAACTTCAC+AGG + chr8_2:59588151-59588170 None:intergenic 50.0%
TCATCCTTGCGCTGGATAAG+AGG + chr8_2:59588484-59588503 None:intergenic 50.0%
CGCCATCTTCCCAGTTTGAT+TGG - chr8_2:59589132-59589151 Msa1258380:intron 50.0%
TCAGATGTCACCTCTTTGGG+AGG + chr8_2:59589367-59589386 None:intergenic 50.0%
TCCCAAAGAGGTGACATCTG+AGG - chr8_2:59589366-59589385 Msa1258380:intron 50.0%
GACCTCAGATGTCACCTCTT+TGG + chr8_2:59589371-59589390 None:intergenic 50.0%
CTGTCACAGCAGCACAGCAA+CGG - chr8_2:59585489-59585508 Msa1258380:three_prime_UTR 55.0%
CAGCAGCACAGCAACGGTAA+TGG - chr8_2:59585495-59585514 Msa1258380:three_prime_UTR 55.0%
TGTCTTATCCCTCCGGTTCC+CGG - chr8_2:59585923-59585942 Msa1258380:intron 55.0%
!! CATTTTGATGCAGGCCCACC+TGG - chr8_2:59587251-59587270 Msa1258380:CDS 55.0%
AGGAGCGAATTACTGGACGC+TGG - chr8_2:59587844-59587863 Msa1258380:intron 55.0%
GGTAGGTTCTGCCACTGGAT+GGG + chr8_2:59587875-59587894 None:intergenic 55.0%
TGGTAGGTTCTGCCACTGGA+TGG + chr8_2:59587876-59587895 None:intergenic 55.0%
TGCTCCTCCCAAGGTTTCTG+GGG - chr8_2:59587905-59587924 Msa1258380:intron 55.0%
TCAACCCCAGAAACCTTGGG+AGG + chr8_2:59587912-59587931 None:intergenic 55.0%
TGAGCCTCTTATCCAGCGCA+AGG - chr8_2:59588477-59588496 Msa1258380:intron 55.0%
! CAAGACTCGAGGCGTTTCAC+AGG - chr8_2:59588524-59588543 Msa1258380:intron 55.0%
TAGAGTTCCCCTTGGACCCT+CGG - chr8_2:59589409-59589428 Msa1258380:intron 55.0%
AAGCAGCAGTTCGATCCCGA+GGG + chr8_2:59589428-59589447 None:intergenic 55.0%
TAAGCAGCAGTTCGATCCCG+AGG + chr8_2:59589429-59589448 None:intergenic 55.0%
GTCTTATCCCTCCGGTTCCC+GGG - chr8_2:59585924-59585943 Msa1258380:intron 60.0%
TCTTATCCCTCCGGTTCCCG+GGG - chr8_2:59585925-59585944 Msa1258380:intron 60.0%
GGCCCACCTGGATCTGGAAA+AGG - chr8_2:59587263-59587282 Msa1258380:CDS 60.0%
CGCTGGATACACCCATCCAG+TGG - chr8_2:59587861-59587880 Msa1258380:intron 60.0%
CTGCAGTGTCATCCTTGCGC+TGG + chr8_2:59588492-59588511 None:intergenic 60.0%
AGAGTTCCCCTTGGACCCTC+GGG - chr8_2:59589410-59589429 Msa1258380:intron 60.0%
TTCGATCCCGAGGGTCCAAG+GGG + chr8_2:59589419-59589438 None:intergenic 60.0%
GTTCGATCCCGAGGGTCCAA+GGG + chr8_2:59589420-59589439 None:intergenic 60.0%
AGTTCGATCCCGAGGGTCCA+AGG + chr8_2:59589421-59589440 None:intergenic 60.0%
CTTATCCCTCCGGTTCCCGG+GGG - chr8_2:59585926-59585945 Msa1258380:intron 65.0%
TTATCCCTCCGGTTCCCGGG+GGG - chr8_2:59585927-59585946 Msa1258380:intron 65.0%
GGTTACTTCCCCCCGGGAAC+CGG + chr8_2:59585938-59585957 None:intergenic 65.0%
GATGCAGGCCCACCTGGATC+TGG - chr8_2:59587257-59587276 Msa1258380:CDS 65.0%
ACTTCCCCCCGGGAACCGGA+GGG + chr8_2:59585934-59585953 None:intergenic 70.0%
TACTTCCCCCCGGGAACCGG+AGG + chr8_2:59585935-59585954 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 59585286 59589796 59585286 ID=Msa1258380;Name=Msa1258380
chr8_2 mRNA 59585286 59589796 59585286 ID=Msa1258380-mRNA-1;Parent=Msa1258380;Name=Msa1258380-mRNA-1;_AED=0.06;_eAED=0.06;_QI=228|1|1|1|1|1|6|385|243
chr8_2 exon 59585286 59585772 59585286 ID=Msa1258380-mRNA-1:exon:18515;Parent=Msa1258380-mRNA-1
chr8_2 exon 59586524 59586613 59586524 ID=Msa1258380-mRNA-1:exon:18514;Parent=Msa1258380-mRNA-1
chr8_2 exon 59587147 59587314 59587147 ID=Msa1258380-mRNA-1:exon:18513;Parent=Msa1258380-mRNA-1
chr8_2 exon 59587453 59587572 59587453 ID=Msa1258380-mRNA-1:exon:18512;Parent=Msa1258380-mRNA-1
chr8_2 exon 59587673 59587818 59587673 ID=Msa1258380-mRNA-1:exon:18511;Parent=Msa1258380-mRNA-1
chr8_2 exon 59589463 59589796 59589463 ID=Msa1258380-mRNA-1:exon:18510;Parent=Msa1258380-mRNA-1
chr8_2 five_prime_UTR 59589569 59589796 59589569 ID=Msa1258380-mRNA-1:five_prime_utr;Parent=Msa1258380-mRNA-1
chr8_2 CDS 59589463 59589568 59589463 ID=Msa1258380-mRNA-1:cds;Parent=Msa1258380-mRNA-1
chr8_2 CDS 59587673 59587818 59587673 ID=Msa1258380-mRNA-1:cds;Parent=Msa1258380-mRNA-1
chr8_2 CDS 59587453 59587572 59587453 ID=Msa1258380-mRNA-1:cds;Parent=Msa1258380-mRNA-1
chr8_2 CDS 59587147 59587314 59587147 ID=Msa1258380-mRNA-1:cds;Parent=Msa1258380-mRNA-1
chr8_2 CDS 59586524 59586613 59586524 ID=Msa1258380-mRNA-1:cds;Parent=Msa1258380-mRNA-1
chr8_2 CDS 59585671 59585772 59585671 ID=Msa1258380-mRNA-1:cds;Parent=Msa1258380-mRNA-1
chr8_2 three_prime_UTR 59585286 59585670 59585286 ID=Msa1258380-mRNA-1:three_prime_utr;Parent=Msa1258380-mRNA-1
Gene Sequence

>Msa1258380

ATGGCGAGTTCTAACTTGGAAGATGTTCCTTCTGTTGATCTCATGTCTGAGTTACTTCGTCGTTTCAAATGTTCCTCCAAACCTGACAAACGTCTTATTCTCGTTGGCCCACCTGGATCTGGAAAAGGTACCCAGTCGCCAATCATTAAGGATGAGTACTGCTTATGCCACTTGGCTACTGGTGATATGTTGAGAGCAGCTGTAGCAGCTAAAACCCCTCTTGGTATTAAAGCGAAAGAAGCTATGGAAAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGCATCATTGATGAAGCAATGAAGAAACCGTCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGCAGAAACAGGGTGCTAAAATTGACAAAGTGCTCAATTTTGCAATTGATGACGCAATCCTTGAGGAGCGAATTACTGGACGCTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAGTTTGCTCCTCCCAAGGTTTCTGGGGTTGATGATGTTACTGGTGAGCCTCTTATCCAGCGCAAGGATGACACTGCAGCTGTTCTTAAGTCAAGACTCGAGGCGTTTCACAGGCAAACTGAACCGGTTATTGATTACTATTCGAAAAAGGGCATTGTTGCTAGTCTCCATGCTGAAAAACCTCCCAAAGAGGTGACATCTGAGGTCGAGAAAGTGCTGTCTCAATAG

Protein sequence

>Msa1258380

MASSNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGIVASLHAEKPPKEVTSEVEKVLSQ*