AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1067320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1067320 MtrunA17_Chr7g0248451 97.252 473 13 0 6 478 11 483 0.0 961
Msa1067320 MtrunA17_Chr8g0348491 79.531 469 96 0 6 474 11 479 0.0 782
Msa1067320 MtrunA17_Chr8g0387391 74.279 451 116 0 26 476 20 470 0.0 727
Msa1067320 MtrunA17_Chr1g0202641 65.152 462 156 2 12 472 16 473 0.0 650
Msa1067320 MtrunA17_Chr1g0202641 65.021 466 155 4 8 472 516 974 0.0 642
Msa1067320 MtrunA17_Chr1g0202651 66.972 436 140 1 37 472 42 473 0.0 627
Msa1067320 MtrunA17_Chr1g0202621 61.905 462 165 3 12 472 9 460 0.0 612
Msa1067320 MtrunA17_Chr7g0255311 65.982 438 142 3 37 471 50 483 0.0 611
Msa1067320 MtrunA17_Chr7g0270821 50.901 444 206 3 11 453 12 444 1.11e-160 463
Msa1067320 MtrunA17_Chr1g0193961 52.567 409 189 3 46 453 39 443 8.36e-158 456
Msa1067320 MtrunA17_Chr3g0095221 47.178 443 229 3 12 453 9 447 6.54e-141 412
Msa1067320 MtrunA17_Chr4g0067811 48.477 394 202 1 46 439 36 428 3.50e-139 408
Msa1067320 MtrunA17_Chr2g0295241 46.348 397 212 1 46 442 33 428 2.15e-137 403
Msa1067320 MtrunA17_Chr4g0070281 47.631 401 207 3 44 442 69 468 3.25e-134 396
Msa1067320 MtrunA17_Chr3g0130251 44.700 434 236 2 14 446 40 470 9.03e-132 389
Msa1067320 MtrunA17_Chr2g0301091 44.820 444 238 5 8 446 15 456 2.01e-130 386
Msa1067320 MtrunA17_Chr5g0442221 48.910 413 200 5 46 453 40 446 4.80e-128 379
Msa1067320 MtrunA17_Chr2g0319881 58.865 141 58 0 46 186 39 179 6.93e-55 181
Msa1067320 MtrunA17_Chr6g0468871 70.130 77 23 0 243 319 22 98 1.95e-33 122
Msa1067320 MtrunA17_Chr5g0418411 30.794 315 180 11 55 361 34 318 4.31e-30 121
Msa1067320 MtrunA17_Chr3g0121881 25.934 455 256 20 9 439 1 398 1.40e-26 111
Msa1067320 MtrunA17_Chr3g0121891 24.775 444 271 15 9 439 1 394 4.92e-26 109
Msa1067320 MtrunA17_Chr2g0303941 25.926 405 249 13 47 439 25 390 5.16e-26 109
Msa1067320 MtrunA17_Chr6g0449961 24.439 446 281 14 16 451 17 416 6.20e-23 100
Msa1067320 MtrunA17_Chr4g0043661 23.810 399 258 12 51 436 24 389 4.12e-22 98.2
Msa1067320 MtrunA17_Chr5g0413141 26.603 312 186 10 52 350 61 342 1.86e-21 96.7
Msa1067320 MtrunA17_Chr1g0173451 25.087 287 192 7 163 444 172 440 3.33e-21 95.9
Msa1067320 MtrunA17_Chr8g0365901 24.865 370 239 10 51 411 66 405 1.67e-20 94.0
Msa1067320 MtrunA17_Chr2g0332971 27.575 301 174 12 51 338 29 298 1.03e-19 90.9
Msa1067320 MtrunA17_Chr6g0468861 55.224 67 30 0 345 411 3 69 1.77e-19 82.8
Msa1067320 MtrunA17_Chr1g0150291 24.297 391 253 10 55 437 50 405 1.79e-19 90.5
Msa1067320 MtrunA17_Chr4g0043431 25.063 399 254 14 51 439 36 399 2.99e-19 89.7
Msa1067320 MtrunA17_Chr3g0100091 30.457 197 120 4 151 345 75 256 3.75e-19 89.0
Msa1067320 MtrunA17_Chr7g0230891 22.907 454 280 15 1 439 1 399 9.79e-19 88.2
Msa1067320 MtrunA17_Chr8g0337571 25.459 436 264 17 13 439 4 387 2.09e-18 87.0
Msa1067320 MtrunA17_Chr4g0067631 25.553 407 244 16 51 438 53 419 5.64e-18 85.9
Msa1067320 MtrunA17_Chr2g0332801 24.752 303 206 7 145 439 140 428 7.33e-18 85.9
Msa1067320 MtrunA17_Chr8g0336481 26.957 230 138 6 163 388 51 254 1.42e-17 82.8
Msa1067320 MtrunA17_Chr8g0348981 23.250 400 263 9 51 438 28 395 4.65e-17 83.2
Msa1067320 MtrunA17_Chr2g0291841 24.586 362 232 10 85 437 29 358 5.26e-17 82.4
Msa1067320 MtrunA17_Chr7g0258111 25.723 311 188 8 51 347 49 330 1.19e-16 82.4
Msa1067320 MtrunA17_Chr7g0270361 25.325 308 190 10 55 349 72 352 2.03e-16 81.6
Msa1067320 MtrunA17_Chr3g0089021 21.586 454 306 12 5 439 14 436 8.09e-16 79.3
Msa1067320 MtrunA17_Chr1g0150301 24.041 391 262 10 51 437 28 387 1.01e-15 79.0
Msa1067320 MtrunA17_Chr4g0052621 23.077 416 274 13 52 451 67 452 1.22e-15 79.0
Msa1067320 MtrunA17_Chr1g0194231 26.214 309 187 11 55 349 86 367 1.45e-15 79.0
Msa1067320 MtrunA17_Chr8g0337581 29.897 194 117 5 155 345 121 298 5.22e-15 76.6
Msa1067320 MtrunA17_Chr4g0018151 28.175 252 159 8 196 439 202 439 6.80e-15 76.6
Msa1067320 MtrunA17_Chr8g0365891 20.698 430 270 13 51 442 108 504 8.26e-15 76.6
Msa1067320 MtrunA17_Chr1g0195221 24.259 371 237 11 52 411 37 374 1.89e-14 75.1
Msa1067320 MtrunA17_Chr4g0020771 24.427 262 170 6 163 411 168 414 3.48e-14 74.3
Msa1067320 MtrunA17_Chr7g0257721 25.155 322 191 13 19 327 46 330 1.96e-13 71.2
Msa1067320 MtrunA17_Chr8g0337601 26.531 245 160 6 195 436 8 235 2.38e-13 69.7
Msa1067320 MtrunA17_Chr2g0307811 25.180 278 163 10 85 348 56 302 9.57e-13 69.7
Msa1067320 MtrunA17_Chr2g0293681 23.171 410 239 13 55 450 72 419 1.41e-12 69.3
Msa1067320 MtrunA17_Chr1g0149241 21.465 396 245 10 51 442 29 362 1.78e-12 68.6
Msa1067320 MtrunA17_Chr2g0307831 24.242 429 255 20 33 436 6 389 7.88e-12 67.0
Msa1067320 MtrunA17_Chr2g0307821 24.242 429 255 20 33 436 6 389 7.88e-12 67.0
Msa1067320 MtrunA17_Chr7g0257701 26.667 195 118 6 157 345 191 366 8.62e-12 67.0
Msa1067320 MtrunA17_Chr2g0319871 46.032 63 34 0 192 254 1 63 9.65e-12 60.5
Msa1067320 MtrunA17_Chr7g0228411 23.022 417 248 16 56 436 46 425 1.33e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1067320 AT3G61490.4 69.311 479 138 2 5 474 110 588 0.0 718
Msa1067320 AT3G61490.5 69.311 479 138 2 5 474 12 490 0.0 714
Msa1067320 AT3G61490.2 69.684 475 135 2 9 474 1 475 0.0 712
Msa1067320 AT3G61490.3 69.684 475 135 2 9 474 1 475 0.0 712
Msa1067320 AT3G61490.1 69.684 475 135 2 9 474 1 475 0.0 712
Msa1067320 AT4G23500.1 67.574 441 142 1 38 478 56 495 0.0 643
Msa1067320 AT3G48950.1 63.248 468 166 5 8 470 1 467 0.0 635
Msa1067320 AT2G23900.1 59.275 469 186 4 6 471 10 476 0.0 591
Msa1067320 AT3G62110.1 49.165 419 207 2 46 458 39 457 4.12e-155 449
Msa1067320 AT3G62110.2 49.165 419 207 2 46 458 39 457 4.12e-155 449
Msa1067320 AT4G23820.1 47.682 453 228 3 3 455 1 444 1.02e-145 424
Msa1067320 AT4G33440.1 50.000 406 198 3 51 455 73 474 1.28e-133 395
Msa1067320 AT5G41870.1 45.934 455 234 7 3 454 1 446 7.27e-131 387
Msa1067320 AT3G16850.1 45.750 400 214 1 43 442 33 429 3.74e-126 375
Msa1067320 AT3G42950.1 46.447 394 208 3 51 442 67 459 1.29e-124 372
Msa1067320 AT5G49215.2 44.810 395 217 1 46 439 37 431 1.54e-123 368
Msa1067320 AT5G49215.1 44.810 395 217 1 46 439 39 433 1.79e-123 368
Msa1067320 AT3G06770.5 42.494 433 246 2 7 439 3 432 1.48e-122 365
Msa1067320 AT3G06770.2 42.166 434 248 2 6 439 1 431 6.07e-122 363
Msa1067320 AT1G19170.1 43.878 392 216 4 52 440 89 479 5.69e-119 358
Msa1067320 AT3G06770.1 43.562 365 205 1 78 442 2 365 3.47e-107 323
Msa1067320 AT3G06770.3 43.562 365 205 1 78 442 2 365 3.47e-107 323
Msa1067320 AT3G06770.4 40.058 347 202 2 101 442 2 347 3.95e-87 271
Msa1067320 AT5G17200.1 30.473 338 190 11 11 345 8 303 2.49e-31 125
Msa1067320 AT3G15720.1 29.167 312 172 10 47 349 21 292 5.24e-25 107
Msa1067320 AT3G15720.3 29.167 312 172 10 47 349 20 291 6.04e-25 107
Msa1067320 AT2G41850.1 26.829 410 237 15 49 440 67 431 1.61e-23 103
Msa1067320 AT3G15720.2 29.167 312 169 11 47 349 20 288 4.99e-23 102
Msa1067320 AT5G14650.1 24.384 406 267 12 51 448 52 425 1.10e-22 100
Msa1067320 AT1G23460.2 25.628 398 253 13 55 442 48 412 3.81e-22 99.0
Msa1067320 AT3G57510.1 23.628 419 243 12 46 439 64 430 3.98e-22 99.0
Msa1067320 AT1G23460.1 25.628 398 253 13 55 442 72 436 4.23e-22 99.4
Msa1067320 AT3G57790.2 26.923 312 189 7 51 347 36 323 4.94e-21 96.3
Msa1067320 AT3G57790.1 26.923 312 189 7 51 347 36 323 4.94e-21 96.3
Msa1067320 AT1G70500.1 24.368 435 283 13 39 463 60 458 5.76e-21 95.9
Msa1067320 AT3G15720.4 30.244 205 123 5 147 349 42 228 5.90e-21 95.1
Msa1067320 AT5G44840.1 27.859 341 200 14 52 382 26 330 7.45e-21 94.7
Msa1067320 AT3G26610.1 23.641 368 239 11 55 411 72 408 2.43e-20 94.0
Msa1067320 AT1G10640.1 22.989 435 267 14 51 449 120 522 3.85e-20 93.6
Msa1067320 AT2G43870.1 25.248 404 259 11 44 439 15 383 4.02e-20 92.4
Msa1067320 AT3G07970.1 24.585 301 209 6 145 439 150 438 9.22e-20 92.0
Msa1067320 AT4G35670.1 27.184 309 180 12 51 349 25 298 2.82e-19 90.1
Msa1067320 AT5G27530.1 25.589 297 174 10 55 345 58 313 9.39e-19 89.0
Msa1067320 AT2G43880.2 27.597 308 182 10 49 349 30 303 9.55e-19 87.8
Msa1067320 AT2G43880.1 24.433 397 256 12 49 437 30 390 1.47e-18 87.8
Msa1067320 AT5G44830.1 27.679 224 131 6 163 382 75 271 2.79e-18 86.3
Msa1067320 AT1G60590.1 21.847 444 270 14 51 452 124 532 3.25e-18 87.8
Msa1067320 AT4G35670.2 31.188 202 116 7 153 349 8 191 4.81e-18 84.7
Msa1067320 AT4G32380.1 30.374 214 127 7 153 362 118 313 5.99e-18 86.7
Msa1067320 AT1G56710.1 22.992 361 225 9 3 349 13 334 1.91e-17 84.7
Msa1067320 AT1G43090.1 29.391 279 160 10 55 327 36 283 3.37e-17 84.3
Msa1067320 AT1G78400.1 23.441 401 259 11 52 439 37 402 3.41e-17 84.0
Msa1067320 AT1G43100.1 29.893 281 156 12 55 327 36 283 4.89e-17 83.6
Msa1067320 AT1G02460.1 24.359 312 192 8 55 349 94 378 9.05e-17 83.2
Msa1067320 AT1G65570.1 24.510 408 250 15 49 439 30 396 1.43e-16 82.0
Msa1067320 AT2G15460.1 30.216 278 157 10 56 327 37 283 1.50e-16 82.0
Msa1067320 AT1G48100.1 22.651 415 269 12 52 447 82 463 1.59e-16 82.4
Msa1067320 AT2G26620.1 28.986 276 163 8 56 327 37 283 1.61e-16 81.6
Msa1067320 AT2G43860.1 24.682 393 255 15 55 439 38 397 1.75e-16 81.6
Msa1067320 AT1G43080.1 25.126 398 254 15 55 439 36 402 1.81e-16 81.6
Msa1067320 AT4G32380.2 30.556 216 127 8 153 363 118 315 1.92e-16 81.6
Msa1067320 AT3G59850.1 26.133 375 233 11 47 411 20 360 4.63e-16 80.5
Msa1067320 AT5G14650.2 26.071 280 176 10 51 327 52 303 4.92e-16 79.3
Msa1067320 AT3G59850.2 26.133 375 233 11 47 411 64 404 6.92e-16 80.1
Msa1067320 AT1G02790.1 25.776 322 190 13 52 362 54 337 9.43e-16 79.7
Msa1067320 AT4G13760.1 28.417 278 162 10 56 327 37 283 9.52e-16 79.3
Msa1067320 AT2G15470.1 30.824 279 154 13 56 327 37 283 9.87e-16 79.3
Msa1067320 AT2G15450.1 29.496 278 159 10 56 327 37 283 1.13e-15 79.3
Msa1067320 AT1G80170.1 22.475 396 268 11 54 439 57 423 1.31e-15 79.3
Msa1067320 AT4G32375.1 27.778 216 138 6 145 358 11 210 1.80e-15 79.0
Msa1067320 AT4G01890.1 25.641 312 188 11 55 349 70 354 4.47e-15 77.8
Msa1067320 AT2G43890.1 22.222 279 200 6 163 437 123 388 7.72e-15 76.6
Msa1067320 AT1G17150.1 23.171 410 261 12 46 439 29 400 1.15e-14 76.3
Msa1067320 AT1G80140.1 29.545 264 135 13 89 338 6 232 7.19e-14 73.2
Msa1067320 AT2G40310.1 28.276 290 167 12 46 327 27 283 7.79e-14 73.6
Msa1067320 AT5G48140.1 25.217 230 147 6 163 382 113 327 1.42e-13 72.8
Msa1067320 AT1G80170.2 24.028 283 176 10 54 327 57 309 1.41e-12 68.9
Msa1067320 AT3G07820.1 26.838 272 164 11 71 327 19 270 4.43e-12 68.2
Msa1067320 AT1G05650.1 22.353 255 179 7 163 411 122 363 4.65e-12 68.2
Msa1067320 AT1G05660.1 22.353 255 179 7 163 411 122 363 7.34e-12 67.4
Msa1067320 AT4G32370.1 26.496 234 155 6 145 374 119 339 1.75e-11 65.9
Msa1067320 AT5G39910.1 29.070 172 105 4 185 352 145 303 1.90e-11 65.9
Msa1067320 AT3G14040.1 22.623 305 214 8 152 447 154 445 3.84e-11 65.5
Msa1067320 AT3G07830.1 25.000 232 145 8 163 382 114 328 8.06e-11 64.3

Find 104 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTACTCTCAACTCTTTC+TGG 0.117405 7_2:-61827207 None:intergenic
GCAATGCAAATTCCCTTAAA+AGG 0.157749 7_2:-61830198 None:intergenic
AGTGCTTCATTGACAGATTT+TGG 0.197810 7_2:+61827285 Msa1067320:CDS
GAGTTTACCTATTGATAATT+TGG 0.201553 7_2:+61830374 Msa1067320:CDS
GAAGACTGCTACATAGTTTC+TGG 0.221963 7_2:+61829748 Msa1067320:CDS
AGATTCAGAAGCTTCATATT+TGG 0.225619 7_2:+61828283 Msa1067320:CDS
TACTAGTTTATGGAACTTAA+TGG 0.252132 7_2:+61830493 Msa1067320:three_prime_UTR
GGAGAGTTAGATTTGAGATT+TGG 0.263063 7_2:-61829288 None:intergenic
GCAATCTCAGGCAAAGCATT+AGG 0.278588 7_2:-61830102 None:intergenic
GATGAGTATGGCATCAAATT+TGG 0.308163 7_2:+61829802 Msa1067320:CDS
TAGTCACTTTACTCTCTATC+TGG 0.317006 7_2:+61827446 Msa1067320:CDS
AAATGCACCCTGACCATCTA+TGG 0.333469 7_2:-61829188 None:intergenic
TGTATGTTCCAGCAGGAAAA+TGG 0.341261 7_2:+61827400 Msa1067320:CDS
TTAAGCTCCAAATTATCAAT+AGG 0.350545 7_2:-61830381 None:intergenic
TAGATGGTCAGGGTGCATTT+TGG 0.351253 7_2:+61829191 Msa1067320:CDS
TGCTGTTCTCCTTGCTTCTC+AGG 0.364969 7_2:+61827476 Msa1067320:CDS
TGTGATCTGTTGCCTGATCA+AGG 0.381355 7_2:+61830315 Msa1067320:CDS
CATTCCATGATGGAGAATTA+AGG 0.381617 7_2:-61829309 None:intergenic
CAATCTCAGGCAAAGCATTA+GGG 0.397084 7_2:-61830101 None:intergenic
TTCAGTGCAACCATTGCCTT+AGG 0.398004 7_2:+61829874 Msa1067320:CDS
AACATAAGTTCAATCAGATA+TGG 0.405173 7_2:-61829253 None:intergenic
AAATGGCACCATAGATGGTC+AGG 0.406486 7_2:+61829180 Msa1067320:CDS
ACAGCCATTCGAACTGAATC+AGG 0.406487 7_2:+61829943 Msa1067320:CDS
TTACCATGCATACTATGAAA+TGG 0.406911 7_2:+61830028 Msa1067320:CDS
ATGTAATGTAGTTACTGTTA+AGG 0.408424 7_2:+61830427 Msa1067320:exon
GATCAAGGGCCTGAGAAAAT+CGG 0.410347 7_2:+61830330 Msa1067320:CDS
ATCAAGGGCCTGAGAAAATC+GGG 0.416111 7_2:+61830331 Msa1067320:CDS
CAATGCAAATTCCCTTAAAA+GGG 0.421496 7_2:-61830197 None:intergenic
TAGTGTTACCTGCTGTAAAC+AGG 0.430625 7_2:-61829337 None:intergenic
TGCTCTCTTTGTGGTGACAC+TGG 0.434597 7_2:+61827179 Msa1067320:CDS
ATTAGTCACCTAAGTCAGTA+TGG 0.440976 7_2:+61827357 Msa1067320:CDS
TCAATAGGTAAACTCTCTGC+TGG 0.453641 7_2:-61830366 None:intergenic
AAGAGTGGATGGGATGAGTA+TGG 0.455331 7_2:+61829790 Msa1067320:CDS
GACACTAGGGATGGCTGTTA+AGG 0.457483 7_2:+61830227 Msa1067320:CDS
ACCATAGCAGCTAGGTTTCA+AGG 0.460046 7_2:+61830162 Msa1067320:CDS
AAGACTGCTACATAGTTTCT+GGG 0.462202 7_2:+61829749 Msa1067320:CDS
GGGGAAAATGGCACCATAGA+TGG 0.463012 7_2:+61829175 Msa1067320:intron
TCGAATGGCTGTAATGTCTT+CGG 0.465147 7_2:-61829932 None:intergenic
TAGTTGATATTTGCAATCTC+AGG 0.469997 7_2:-61830114 None:intergenic
TACCATGCATACTATGAAAT+GGG 0.473494 7_2:+61830029 Msa1067320:CDS
GGGTTGATACCATCAGTGTT+AGG 0.479630 7_2:-61829490 None:intergenic
ATCAAAACAGCTGTTGGTAG+AGG 0.505178 7_2:+61829973 Msa1067320:CDS
CTCTCCTTAATTCTCCATCA+TGG 0.508913 7_2:+61829305 Msa1067320:CDS
TCCTTGAAACCTAGCTGCTA+TGG 0.510139 7_2:-61830163 None:intergenic
CCTCTACCGTATGATGGTAA+TGG 0.510333 7_2:-61828241 None:intergenic
CTTGAGAACCATACTGACTT+AGG 0.516248 7_2:-61827365 None:intergenic
TGCATTGCAAACGTGACACT+AGG 0.521226 7_2:+61830213 Msa1067320:CDS
ATGTTCATCCTGTTTACAGC+AGG 0.524842 7_2:+61829329 Msa1067320:CDS
GATGGTAATGGTTCAAGCGC+AGG 0.530658 7_2:-61828229 None:intergenic
TGGACATGCACTGATATTGA+AGG 0.532216 7_2:+61830264 Msa1067320:CDS
TGGAAATACATCTAATACAA+AGG 0.532307 7_2:+61827320 Msa1067320:CDS
AAATGGGCATTTAAGATGAC+AGG 0.535872 7_2:+61830045 Msa1067320:CDS
TCTCTTCCTCTACCGTATGA+TGG 0.537275 7_2:-61828247 None:intergenic
TCCTGACATCTCACTCCCTA+AGG 0.538951 7_2:-61829890 None:intergenic
AAGCTTCTGAATCTTCCTGC+TGG 0.539199 7_2:-61828274 None:intergenic
GTGATCTGTTGCCTGATCAA+GGG 0.542192 7_2:+61830316 Msa1067320:CDS
AGAGGAAGAGATGCACCAGC+AGG 0.542607 7_2:+61828259 Msa1067320:CDS
CTCACGGATGTTATTGTCAC+AGG 0.543826 7_2:+61828313 Msa1067320:CDS
GTGTTGCTGTGAAGAGTGGA+TGG 0.544315 7_2:+61829779 Msa1067320:CDS
TGCCCATTTCATAGTATGCA+TGG 0.547287 7_2:-61830031 None:intergenic
CCAGCAGGAAAATGGCTCAC+TGG 0.548013 7_2:+61827408 Msa1067320:CDS
AAAACAGCTGTTGGTAGAGG+AGG 0.553170 7_2:+61829976 Msa1067320:CDS
AACACCTGATTCAGTTCGAA+TGG 0.553272 7_2:-61829947 None:intergenic
CTAAGTCAGTATGGTTCTCA+AGG 0.555173 7_2:+61827366 Msa1067320:CDS
ATCTCATCTCCTAACACTGA+TGG 0.557144 7_2:+61829481 Msa1067320:CDS
AAGGCAATGGTTGCACTGAA+TGG 0.560248 7_2:-61829871 None:intergenic
GCCTTAGGGAGTGAGATGTC+AGG 0.561228 7_2:+61829889 Msa1067320:CDS
TCTCAGCTGTATGTTCCAGC+AGG 0.565650 7_2:+61827393 Msa1067320:CDS
TCAGTGCAACCATTGCCTTA+GGG 0.567164 7_2:+61829875 Msa1067320:CDS
GTTAGAATCAAAACAGCTGT+TGG 0.569984 7_2:+61829967 Msa1067320:CDS
TATCAACTATAGAGATGTTG+TGG 0.574989 7_2:+61830128 Msa1067320:CDS
AGTATGGCATCAAATTTGGC+TGG 0.576629 7_2:+61829806 Msa1067320:CDS
GACTGTGTTGCTGTGAAGAG+TGG 0.579759 7_2:+61829775 Msa1067320:CDS
TCAGTGTTAGGAGATGAGAT+AGG 0.579789 7_2:-61829478 None:intergenic
CAATAGGTAAACTCTCTGCT+GGG 0.588902 7_2:-61830365 None:intergenic
CCATTACCATCATACGGTAG+AGG 0.588919 7_2:+61828241 Msa1067320:CDS
CATCTCACTCCCTAAGGCAA+TGG 0.593363 7_2:-61829884 None:intergenic
CTTGAACCATTACCATCATA+CGG 0.596573 7_2:+61828235 Msa1067320:CDS
TGGCTGTTAAGGCCAAGAAA+AGG 0.599659 7_2:+61830238 Msa1067320:CDS
TGCAGCAACATTATTATACA+AGG 0.600142 7_2:+61829439 Msa1067320:intron
ACTCTCTGCTGGGAAATCAC+AGG 0.604357 7_2:-61830355 None:intergenic
GCATTGCAAACGTGACACTA+GGG 0.606374 7_2:+61830214 Msa1067320:CDS
ACAACTTCATTTGAGTACAA+TGG 0.606953 7_2:+61827243 Msa1067320:CDS
GGCAACAGATCACAAGGCGG+AGG 0.607948 7_2:-61830306 None:intergenic
TTAAGGCCAAGAAAAGGTCA+TGG 0.613134 7_2:+61830244 Msa1067320:CDS
ACAGGATGAACATTCCATGA+TGG 0.616431 7_2:-61829319 None:intergenic
AAACAGCTGTTGGTAGAGGA+GGG 0.626382 7_2:+61829977 Msa1067320:CDS
AGAATGTTACCATAGCAGCT+AGG 0.630037 7_2:+61830154 Msa1067320:CDS
TGCAAACGTGACACTAGGGA+TGG 0.639488 7_2:+61830218 Msa1067320:CDS
TGATCAGGCAACAGATCACA+AGG 0.647899 7_2:-61830312 None:intergenic
TTAGGGAGTGAGATGTCAGG+AGG 0.656161 7_2:+61829892 Msa1067320:CDS
CATATTTGGAACAAACCTCA+CGG 0.657666 7_2:+61828297 Msa1067320:CDS
AACACTGATGGTATCAACCC+AGG 0.663362 7_2:+61829493 Msa1067320:CDS
AATGGCACCATAGATGGTCA+GGG 0.669112 7_2:+61829181 Msa1067320:CDS
AGTCAGTATGGTTCTCAAGG+TGG 0.672780 7_2:+61827369 Msa1067320:CDS
AGACTGCTACATAGTTTCTG+GGG 0.678381 7_2:+61829750 Msa1067320:CDS
TCAAGGGCCTGAGAAAATCG+GGG 0.683370 7_2:+61830332 Msa1067320:CDS
GGACATGCACTGATATTGAA+GGG 0.687510 7_2:+61830265 Msa1067320:CDS
TGGTAGAGGAGGGTATGTGA+AGG 0.693483 7_2:+61829987 Msa1067320:CDS
TAGGGAGTGAGATGTCAGGA+GGG 0.694750 7_2:+61829893 Msa1067320:CDS
TGTTGCTGTGAAGAGTGGAT+GGG 0.695217 7_2:+61829780 Msa1067320:CDS
TACTTTAGGATATCACTGAG+TGG 0.702006 7_2:+61828206 Msa1067320:intron
CTGTGACAATAACATCCGTG+AGG 0.748176 7_2:-61828312 None:intergenic
TCAGGCAACAGATCACAAGG+CGG 0.811321 7_2:-61830309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAAAATTTATCTATAG+TGG - chr7_2:61829132-61829151 None:intergenic 10.0%
!! TTGCATTAATAAAATACTTT+AGG + chr7_2:61828192-61828211 Msa1067320:intron 15.0%
!!! GATTTTGAACAATAAATTTT+AGG + chr7_2:61828516-61828535 Msa1067320:intron 15.0%
!! TGTTGGAAAAAAAATAAGAA+AGG + chr7_2:61827767-61827786 Msa1067320:intron 20.0%
!! GTTGGAAAAAAAATAAGAAA+GGG + chr7_2:61827768-61827787 Msa1067320:intron 20.0%
!!! TTTTAATCTTACTTTTGAGA+CGG - chr7_2:61828997-61829016 None:intergenic 20.0%
!!! TTTTGTTATTACATAGTCTT+TGG - chr7_2:61829408-61829427 None:intergenic 20.0%
!!! GTTAATCATACATTTTTCTT+GGG - chr7_2:61829551-61829570 None:intergenic 20.0%
!! AATAATTTTTGCTCTCTTTG+TGG + chr7_2:61827170-61827189 Msa1067320:CDS 25.0%
! TGGAAATACATCTAATACAA+AGG + chr7_2:61827320-61827339 Msa1067320:CDS 25.0%
! TAGAAAATAGAAGTTTGTAG+AGG + chr7_2:61827844-61827863 Msa1067320:intron 25.0%
! AGAAAATAGAAGTTTGTAGA+GGG + chr7_2:61827845-61827864 Msa1067320:intron 25.0%
! TATTGTTCTTATAGAAAGTG+AGG - chr7_2:61827924-61827943 None:intergenic 25.0%
!! TTTTTGTGAATCAAAGGTTT+AGG - chr7_2:61827988-61828007 None:intergenic 25.0%
!!! AAGTTGTTTTTGTGAATCAA+AGG - chr7_2:61827994-61828013 None:intergenic 25.0%
! AGCAAAAGACAAAAATGTAA+TGG - chr7_2:61828082-61828101 None:intergenic 25.0%
!!! GATTTTGAGAAAACTAGTTA+TGG + chr7_2:61828439-61828458 Msa1067320:intron 25.0%
! AAGTTTAAATGATTGTTCTG+TGG + chr7_2:61828561-61828580 Msa1067320:intron 25.0%
!! GGAGCTTTTCAATTAAAATA+AGG - chr7_2:61828648-61828667 None:intergenic 25.0%
! GATCTCTTATCAGAATATAT+AGG - chr7_2:61828699-61828718 None:intergenic 25.0%
!!! ATAAATGAAGTTTTGAGTCA+TGG - chr7_2:61828863-61828882 None:intergenic 25.0%
!! TTTTAATCTTACGATTGAGA+CGG - chr7_2:61828924-61828943 None:intergenic 25.0%
!!! ATTTTCTAGAAGTAGAACTT+TGG - chr7_2:61829024-61829043 None:intergenic 25.0%
!! AAAGTTCTACTTCTAGAAAA+TGG + chr7_2:61829023-61829042 Msa1067320:intron 25.0%
!! TATAGTGGCAAATTGTATTT+TGG - chr7_2:61829117-61829136 None:intergenic 25.0%
! AACATAAGTTCAATCAGATA+TGG - chr7_2:61829256-61829275 None:intergenic 25.0%
!! CGTTAATCATACATTTTTCT+TGG - chr7_2:61829552-61829571 None:intergenic 25.0%
!! CTTTTCTGTTAGATTATGTT+TGG - chr7_2:61829608-61829627 None:intergenic 25.0%
! AGAATCTAACATCAACATAA+AGG - chr7_2:61829710-61829729 None:intergenic 25.0%
!! GAGTTTACCTATTGATAATT+TGG + chr7_2:61830374-61830393 Msa1067320:CDS 25.0%
! TTAAGCTCCAAATTATCAAT+AGG - chr7_2:61830384-61830403 None:intergenic 25.0%
! ATGTAATGTAGTTACTGTTA+AGG + chr7_2:61830427-61830446 Msa1067320:exon 25.0%
!!! CTTTTTTCTCTACTAGTTTA+TGG + chr7_2:61830483-61830502 Msa1067320:three_prime_UTR 25.0%
!! TACTAGTTTATGGAACTTAA+TGG + chr7_2:61830493-61830512 Msa1067320:three_prime_UTR 25.0%
ACAACTTCATTTGAGTACAA+TGG + chr7_2:61827243-61827262 Msa1067320:CDS 30.0%
!!! TTTTTTTGTCAAAACTGCCT+TGG + chr7_2:61827510-61827529 Msa1067320:intron 30.0%
! TAATCTAGAGTTCAACTGAT+AGG + chr7_2:61827555-61827574 Msa1067320:intron 30.0%
ACTAAAATGAAGTTAGCATG+AGG + chr7_2:61827691-61827710 Msa1067320:intron 30.0%
! TTCTAAGTGTGACACATTTT+TGG + chr7_2:61828121-61828140 Msa1067320:intron 30.0%
AGATTCAGAAGCTTCATATT+TGG + chr7_2:61828283-61828302 Msa1067320:CDS 30.0%
! ACAGTCTAAGATTTATAACG+AGG - chr7_2:61828794-61828813 None:intergenic 30.0%
! ATTTTCCCCTGTTAACAAAA+GGG - chr7_2:61829164-61829183 None:intergenic 30.0%
! ATAGTCTTTGGAAGTAAAAG+AGG - chr7_2:61829396-61829415 None:intergenic 30.0%
TGCAGCAACATTATTATACA+AGG + chr7_2:61829439-61829458 Msa1067320:intron 30.0%
AAATCTTCAAATACTGACCT+GGG - chr7_2:61829513-61829532 None:intergenic 30.0%
AAAATCTTCAAATACTGACC+TGG - chr7_2:61829514-61829533 None:intergenic 30.0%
ACAATGCAACCAAAAAACTA+TGG + chr7_2:61829656-61829675 Msa1067320:intron 30.0%
!!! CAATCCAATCCATAGTTTTT+TGG - chr7_2:61829668-61829687 None:intergenic 30.0%
!! CTGATTACTAGTTGTTTTGT+AGG - chr7_2:61829832-61829851 None:intergenic 30.0%
TTACCATGCATACTATGAAA+TGG + chr7_2:61830028-61830047 Msa1067320:CDS 30.0%
TACCATGCATACTATGAAAT+GGG + chr7_2:61830029-61830048 Msa1067320:CDS 30.0%
! TAGTTGATATTTGCAATCTC+AGG - chr7_2:61830117-61830136 None:intergenic 30.0%
TATCAACTATAGAGATGTTG+TGG + chr7_2:61830128-61830147 Msa1067320:CDS 30.0%
! AATCTCTAATGACCCTTTTA+AGG + chr7_2:61830185-61830204 Msa1067320:CDS 30.0%
! ATCTCTAATGACCCTTTTAA+GGG + chr7_2:61830186-61830205 Msa1067320:CDS 30.0%
CAATGCAAATTCCCTTAAAA+GGG - chr7_2:61830200-61830219 None:intergenic 30.0%
TTTCTACTCTCAACTCTTTC+TGG - chr7_2:61827210-61827229 None:intergenic 35.0%
! AGTGCTTCATTGACAGATTT+TGG + chr7_2:61827285-61827304 Msa1067320:CDS 35.0%
ATTAGTCACCTAAGTCAGTA+TGG + chr7_2:61827357-61827376 Msa1067320:CDS 35.0%
! TAGTCACTTTACTCTCTATC+TGG + chr7_2:61827446-61827465 Msa1067320:CDS 35.0%
AAAAAGATACCTGAGAAGCA+AGG - chr7_2:61827488-61827507 None:intergenic 35.0%
AGTTGAACTCTAGATTACGA+TGG - chr7_2:61827552-61827571 None:intergenic 35.0%
!!! TTAGCGTGTGTTTGGTTTTA+CGG - chr7_2:61827741-61827760 None:intergenic 35.0%
!! GATAGAGTTGGTGTGAATAT+AGG - chr7_2:61828042-61828061 None:intergenic 35.0%
!! ATGTAATGGACCATTCACTA+TGG - chr7_2:61828068-61828087 None:intergenic 35.0%
!! TACTTTAGGATATCACTGAG+TGG + chr7_2:61828206-61828225 Msa1067320:intron 35.0%
CTTGAACCATTACCATCATA+CGG + chr7_2:61828235-61828254 Msa1067320:CDS 35.0%
! CATATTTGGAACAAACCTCA+CGG + chr7_2:61828297-61828316 Msa1067320:CDS 35.0%
ATGTTATTGTCACAGGTATG+TGG + chr7_2:61828320-61828339 Msa1067320:intron 35.0%
TGTTATTGTCACAGGTATGT+GGG + chr7_2:61828321-61828340 Msa1067320:intron 35.0%
ACATAGCCTATTTGACGTTA+CGG + chr7_2:61828405-61828424 Msa1067320:intron 35.0%
TTATCACCGTAACGTCAAAT+AGG - chr7_2:61828414-61828433 None:intergenic 35.0%
TACAACACTGGTGTTTAGTT+TGG - chr7_2:61828616-61828635 None:intergenic 35.0%
TGAAACTTTGACGTCTATGT+TGG + chr7_2:61828747-61828766 Msa1067320:intron 35.0%
! GTCTAAGATTTATAACGAGG+AGG - chr7_2:61828791-61828810 None:intergenic 35.0%
!! CTTTTCTAGAAGCAGAACTT+TGG - chr7_2:61828951-61828970 None:intergenic 35.0%
! GAAAATGGTGTCAATCATGT+TGG + chr7_2:61829038-61829057 Msa1067320:intron 35.0%
!! GTATTTTGGACCATCTATGA+AGG - chr7_2:61829103-61829122 None:intergenic 35.0%
! ACTATGACCCTTTTGTTAAC+AGG + chr7_2:61829154-61829173 Msa1067320:intron 35.0%
! CTATGACCCTTTTGTTAACA+GGG + chr7_2:61829155-61829174 Msa1067320:intron 35.0%
! TATGACCCTTTTGTTAACAG+GGG + chr7_2:61829156-61829175 Msa1067320:intron 35.0%
! CATTTTCCCCTGTTAACAAA+AGG - chr7_2:61829165-61829184 None:intergenic 35.0%
! CTTTTGTTAACAGGGGAAAA+TGG + chr7_2:61829163-61829182 Msa1067320:intron 35.0%
! GGAGAGTTAGATTTGAGATT+TGG - chr7_2:61829291-61829310 None:intergenic 35.0%
! CATTCCATGATGGAGAATTA+AGG - chr7_2:61829312-61829331 None:intergenic 35.0%
GCAACCAAAAAACTATGGAT+TGG + chr7_2:61829661-61829680 Msa1067320:intron 35.0%
AAGACTGCTACATAGTTTCT+GGG + chr7_2:61829749-61829768 Msa1067320:CDS 35.0%
GATGAGTATGGCATCAAATT+TGG + chr7_2:61829802-61829821 Msa1067320:CDS 35.0%
GTTAGAATCAAAACAGCTGT+TGG + chr7_2:61829967-61829986 Msa1067320:CDS 35.0%
! AAATGGGCATTTAAGATGAC+AGG + chr7_2:61830045-61830064 Msa1067320:CDS 35.0%
GCAATGCAAATTCCCTTAAA+AGG - chr7_2:61830201-61830220 None:intergenic 35.0%
! GCTTCATTGACAGATTTTGG+TGG + chr7_2:61827288-61827307 Msa1067320:CDS 40.0%
!!! TTGACAGATTTTGGTGGTGT+TGG + chr7_2:61827294-61827313 Msa1067320:CDS 40.0%
!! CTTGAGAACCATACTGACTT+AGG - chr7_2:61827368-61827387 None:intergenic 40.0%
CTAAGTCAGTATGGTTCTCA+AGG + chr7_2:61827366-61827385 Msa1067320:CDS 40.0%
TGTATGTTCCAGCAGGAAAA+TGG + chr7_2:61827400-61827419 Msa1067320:CDS 40.0%
CAGTTAAAGACGAAACGTTC+AGG - chr7_2:61827635-61827654 None:intergenic 40.0%
CAAAATCGTTAGCGTGTGTT+TGG - chr7_2:61827749-61827768 None:intergenic 40.0%
! ACACACGCTAACGATTTTGT+TGG + chr7_2:61827750-61827769 Msa1067320:intron 40.0%
TCACTATGGCATGATAGAGT+TGG - chr7_2:61828054-61828073 None:intergenic 40.0%
CTCTATCATGCCATAGTGAA+TGG + chr7_2:61828055-61828074 Msa1067320:intron 40.0%
GCTTCAAGTGAGTGGTTATT+GGG + chr7_2:61828583-61828602 Msa1067320:intron 40.0%
AGGTGACAACTTTACAACAC+TGG - chr7_2:61828628-61828647 None:intergenic 40.0%
CGCTAACAGTTAAGCTGAAT+TGG + chr7_2:61828672-61828691 Msa1067320:intron 40.0%
! AGGAGGATCGTGAATTTTTC+GGG - chr7_2:61828774-61828793 None:intergenic 40.0%
! GAGGAGGATCGTGAATTTTT+CGG - chr7_2:61828775-61828794 None:intergenic 40.0%
! TTTTGGACCATCTATGAAGG+TGG - chr7_2:61829100-61829119 None:intergenic 40.0%
CTCTCCTTAATTCTCCATCA+TGG + chr7_2:61829305-61829324 Msa1067320:CDS 40.0%
ACAGGATGAACATTCCATGA+TGG - chr7_2:61829322-61829341 None:intergenic 40.0%
ATGTTCATCCTGTTTACAGC+AGG + chr7_2:61829329-61829348 Msa1067320:CDS 40.0%
TAGTGTTACCTGCTGTAAAC+AGG - chr7_2:61829340-61829359 None:intergenic 40.0%
TCAGTGTTAGGAGATGAGAT+AGG - chr7_2:61829481-61829500 None:intergenic 40.0%
ATCTCATCTCCTAACACTGA+TGG + chr7_2:61829481-61829500 Msa1067320:CDS 40.0%
GAAGACTGCTACATAGTTTC+TGG + chr7_2:61829748-61829767 Msa1067320:CDS 40.0%
AGACTGCTACATAGTTTCTG+GGG + chr7_2:61829750-61829769 Msa1067320:CDS 40.0%
AGTATGGCATCAAATTTGGC+TGG + chr7_2:61829806-61829825 Msa1067320:CDS 40.0%
TCGAATGGCTGTAATGTCTT+CGG - chr7_2:61829935-61829954 None:intergenic 40.0%
AACACCTGATTCAGTTCGAA+TGG - chr7_2:61829950-61829969 None:intergenic 40.0%
! ATCAAAACAGCTGTTGGTAG+AGG + chr7_2:61829973-61829992 Msa1067320:CDS 40.0%
TGCCCATTTCATAGTATGCA+TGG - chr7_2:61830034-61830053 None:intergenic 40.0%
! CAATCTCAGGCAAAGCATTA+GGG - chr7_2:61830104-61830123 None:intergenic 40.0%
AGAATGTTACCATAGCAGCT+AGG + chr7_2:61830154-61830173 Msa1067320:CDS 40.0%
TTAAGGCCAAGAAAAGGTCA+TGG + chr7_2:61830244-61830263 Msa1067320:CDS 40.0%
! TGGACATGCACTGATATTGA+AGG + chr7_2:61830264-61830283 Msa1067320:CDS 40.0%
! GGACATGCACTGATATTGAA+GGG + chr7_2:61830265-61830284 Msa1067320:CDS 40.0%
CAATAGGTAAACTCTCTGCT+GGG - chr7_2:61830368-61830387 None:intergenic 40.0%
TCAATAGGTAAACTCTCTGC+TGG - chr7_2:61830369-61830388 None:intergenic 40.0%
!!! GATTTTGGTGGTGTTGGAGA+TGG + chr7_2:61827300-61827319 Msa1067320:CDS 45.0%
AGTCAGTATGGTTCTCAAGG+TGG + chr7_2:61827369-61827388 Msa1067320:CDS 45.0%
TCAAAACTGCCTTGGTTTCG+AGG + chr7_2:61827518-61827537 Msa1067320:intron 45.0%
GTCTATTTGCCTCGAAACCA+AGG - chr7_2:61827530-61827549 None:intergenic 45.0%
TTTGTAGAGGGAATCACGTG+AGG + chr7_2:61827857-61827876 Msa1067320:intron 45.0%
TTGTAGAGGGAATCACGTGA+GGG + chr7_2:61827858-61827877 Msa1067320:intron 45.0%
CCTCTACCGTATGATGGTAA+TGG - chr7_2:61828244-61828263 None:intergenic 45.0%
CCATTACCATCATACGGTAG+AGG + chr7_2:61828241-61828260 Msa1067320:CDS 45.0%
TCTCTTCCTCTACCGTATGA+TGG - chr7_2:61828250-61828269 None:intergenic 45.0%
AAGCTTCTGAATCTTCCTGC+TGG - chr7_2:61828277-61828296 None:intergenic 45.0%
CTGTGACAATAACATCCGTG+AGG - chr7_2:61828315-61828334 None:intergenic 45.0%
CTCACGGATGTTATTGTCAC+AGG + chr7_2:61828313-61828332 Msa1067320:CDS 45.0%
GGCTTCAAGTGAGTGGTTAT+TGG + chr7_2:61828582-61828601 Msa1067320:intron 45.0%
CAGCTTAACTGTTAGCGCAT+TGG - chr7_2:61828669-61828688 None:intergenic 45.0%
! GGAGGATCGTGAATTTTTCG+GGG - chr7_2:61828773-61828792 None:intergenic 45.0%
GACGGTGACTTGATTGATGT+CGG - chr7_2:61828906-61828925 None:intergenic 45.0%
GACGGTGACTTGATTGATGT+CGG - chr7_2:61828906-61828925 None:intergenic 45.0%
TCTATGAAGGTGGTACACTG+TGG - chr7_2:61829090-61829109 None:intergenic 45.0%
CAGTGTACCACCTTCATAGA+TGG + chr7_2:61829090-61829109 Msa1067320:intron 45.0%
AAATGGCACCATAGATGGTC+AGG + chr7_2:61829180-61829199 Msa1067320:CDS 45.0%
AATGGCACCATAGATGGTCA+GGG + chr7_2:61829181-61829200 Msa1067320:CDS 45.0%
AAATGCACCCTGACCATCTA+TGG - chr7_2:61829191-61829210 None:intergenic 45.0%
! TAGATGGTCAGGGTGCATTT+TGG + chr7_2:61829191-61829210 Msa1067320:CDS 45.0%
!! GGGTTGATACCATCAGTGTT+AGG - chr7_2:61829493-61829512 None:intergenic 45.0%
AACACTGATGGTATCAACCC+AGG + chr7_2:61829493-61829512 Msa1067320:CDS 45.0%
TGTTGCTGTGAAGAGTGGAT+GGG + chr7_2:61829780-61829799 Msa1067320:CDS 45.0%
AAGAGTGGATGGGATGAGTA+TGG + chr7_2:61829790-61829809 Msa1067320:CDS 45.0%
AAGGCAATGGTTGCACTGAA+TGG - chr7_2:61829874-61829893 None:intergenic 45.0%
TTCAGTGCAACCATTGCCTT+AGG + chr7_2:61829874-61829893 Msa1067320:CDS 45.0%
TCAGTGCAACCATTGCCTTA+GGG + chr7_2:61829875-61829894 Msa1067320:CDS 45.0%
ACAGCCATTCGAACTGAATC+AGG + chr7_2:61829943-61829962 Msa1067320:CDS 45.0%
! AAAACAGCTGTTGGTAGAGG+AGG + chr7_2:61829976-61829995 Msa1067320:CDS 45.0%
! AAACAGCTGTTGGTAGAGGA+GGG + chr7_2:61829977-61829996 Msa1067320:CDS 45.0%
! GCAATCTCAGGCAAAGCATT+AGG - chr7_2:61830105-61830124 None:intergenic 45.0%
ACCATAGCAGCTAGGTTTCA+AGG + chr7_2:61830162-61830181 Msa1067320:CDS 45.0%
TCCTTGAAACCTAGCTGCTA+TGG - chr7_2:61830166-61830185 None:intergenic 45.0%
TGCATTGCAAACGTGACACT+AGG + chr7_2:61830213-61830232 Msa1067320:CDS 45.0%
GCATTGCAAACGTGACACTA+GGG + chr7_2:61830214-61830233 Msa1067320:CDS 45.0%
TGGCTGTTAAGGCCAAGAAA+AGG + chr7_2:61830238-61830257 Msa1067320:CDS 45.0%
! GCATGTCCATGACCTTTTCT+TGG - chr7_2:61830253-61830272 None:intergenic 45.0%
TGATCAGGCAACAGATCACA+AGG - chr7_2:61830315-61830334 None:intergenic 45.0%
TGTGATCTGTTGCCTGATCA+AGG + chr7_2:61830315-61830334 Msa1067320:CDS 45.0%
GTGATCTGTTGCCTGATCAA+GGG + chr7_2:61830316-61830335 Msa1067320:CDS 45.0%
! ATTTTCTCAGGCCCTTGATC+AGG - chr7_2:61830330-61830349 None:intergenic 45.0%
GATCAAGGGCCTGAGAAAAT+CGG + chr7_2:61830330-61830349 Msa1067320:CDS 45.0%
ATCAAGGGCCTGAGAAAATC+GGG + chr7_2:61830331-61830350 Msa1067320:CDS 45.0%
TGCTCTCTTTGTGGTGACAC+TGG + chr7_2:61827179-61827198 Msa1067320:CDS 50.0%
TCTCAGCTGTATGTTCCAGC+AGG + chr7_2:61827393-61827412 Msa1067320:CDS 50.0%
TGCTGTTCTCCTTGCTTCTC+AGG + chr7_2:61827476-61827495 Msa1067320:CDS 50.0%
!! GATGGTAATGGTTCAAGCGC+AGG - chr7_2:61828232-61828251 None:intergenic 50.0%
GTTCTGTGGCTTCAAGTGAG+TGG + chr7_2:61828575-61828594 Msa1067320:intron 50.0%
GGGGAAAATGGCACCATAGA+TGG + chr7_2:61829175-61829194 Msa1067320:intron 50.0%
! ATGGTCAGGGTGCATTTTGG+TGG + chr7_2:61829194-61829213 Msa1067320:CDS 50.0%
! GACTGTGTTGCTGTGAAGAG+TGG + chr7_2:61829775-61829794 Msa1067320:CDS 50.0%
! GTGTTGCTGTGAAGAGTGGA+TGG + chr7_2:61829779-61829798 Msa1067320:CDS 50.0%
CATCTCACTCCCTAAGGCAA+TGG - chr7_2:61829887-61829906 None:intergenic 50.0%
TCCTGACATCTCACTCCCTA+AGG - chr7_2:61829893-61829912 None:intergenic 50.0%
TTAGGGAGTGAGATGTCAGG+AGG + chr7_2:61829892-61829911 Msa1067320:CDS 50.0%
TAGGGAGTGAGATGTCAGGA+GGG + chr7_2:61829893-61829912 Msa1067320:CDS 50.0%
! TGGTAGAGGAGGGTATGTGA+AGG + chr7_2:61829987-61830006 Msa1067320:CDS 50.0%
TGCAAACGTGACACTAGGGA+TGG + chr7_2:61830218-61830237 Msa1067320:CDS 50.0%
GACACTAGGGATGGCTGTTA+AGG + chr7_2:61830227-61830246 Msa1067320:CDS 50.0%
TCAGGCAACAGATCACAAGG+CGG - chr7_2:61830312-61830331 None:intergenic 50.0%
TCAAGGGCCTGAGAAAATCG+GGG + chr7_2:61830332-61830351 Msa1067320:CDS 50.0%
ACTCTCTGCTGGGAAATCAC+AGG - chr7_2:61830358-61830377 None:intergenic 50.0%
!! CCAGTGAGCCATTTTCCTGC+TGG - chr7_2:61827411-61827430 None:intergenic 55.0%
CCAGCAGGAAAATGGCTCAC+TGG + chr7_2:61827408-61827427 Msa1067320:CDS 55.0%
AGAGGAAGAGATGCACCAGC+AGG + chr7_2:61828259-61828278 Msa1067320:CDS 55.0%
GCCTTAGGGAGTGAGATGTC+AGG + chr7_2:61829889-61829908 Msa1067320:CDS 55.0%
! TCACAGGCCCCGATTTTCTC+AGG - chr7_2:61830342-61830361 None:intergenic 55.0%
GGCAACAGATCACAAGGCGG+AGG - chr7_2:61830309-61830328 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 61827141 61830578 61827141 ID=Msa1067320;Name=Msa1067320
chr7_2 mRNA 61827141 61830578 61827141 ID=Msa1067320-mRNA-1;Parent=Msa1067320;Name=Msa1067320-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.8|1|1|1|5|141|478
chr7_2 exon 61827141 61827497 61827141 ID=Msa1067320-mRNA-1:exon:12465;Parent=Msa1067320-mRNA-1
chr7_2 exon 61828214 61828334 61828214 ID=Msa1067320-mRNA-1:exon:12466;Parent=Msa1067320-mRNA-1
chr7_2 exon 61829176 61829350 61829176 ID=Msa1067320-mRNA-1:exon:12467;Parent=Msa1067320-mRNA-1
chr7_2 exon 61829444 61829514 61829444 ID=Msa1067320-mRNA-1:exon:12468;Parent=Msa1067320-mRNA-1
chr7_2 exon 61829725 61830578 61829725 ID=Msa1067320-mRNA-1:exon:12469;Parent=Msa1067320-mRNA-1
chr7_2 CDS 61827141 61827497 61827141 ID=Msa1067320-mRNA-1:cds;Parent=Msa1067320-mRNA-1
chr7_2 CDS 61828214 61828334 61828214 ID=Msa1067320-mRNA-1:cds;Parent=Msa1067320-mRNA-1
chr7_2 CDS 61829176 61829350 61829176 ID=Msa1067320-mRNA-1:cds;Parent=Msa1067320-mRNA-1
chr7_2 CDS 61829444 61829514 61829444 ID=Msa1067320-mRNA-1:cds;Parent=Msa1067320-mRNA-1
chr7_2 CDS 61829725 61830437 61829725 ID=Msa1067320-mRNA-1:cds;Parent=Msa1067320-mRNA-1
chr7_2 three_prime_UTR 61830438 61830578 61830438 ID=Msa1067320-mRNA-1:three_prime_utr;Parent=Msa1067320-mRNA-1
Gene Sequence

>Msa1067320

ATGGCTATGTTGATTTTACAGGTTATAAAAATAATTTTTGCTCTCTTTGTGGTGACACTGGTGTATCCAGAAAGAGTTGAGAGTAGAAAAGCAAAAATTGTGACAACTTCATTTGAGTACAATGGTATAAATTGTAGAGCACATAGTGCTTCATTGACAGATTTTGGTGGTGTTGGAGATGGAAATACATCTAATACAAAGGCTTTTGAGTCTGCAATTAGTCACCTAAGTCAGTATGGTTCTCAAGGTGGCTCTCAGCTGTATGTTCCAGCAGGAAAATGGCTCACTGGTAGTTTTAGTCTTACTAGTCACTTTACTCTCTATCTGGATAAAGATGCTGTTCTCCTTGCTTCTCAGGATATCACTGAGTGGCCTGCGCTTGAACCATTACCATCATACGGTAGAGGAAGAGATGCACCAGCAGGAAGATTCAGAAGCTTCATATTTGGAACAAACCTCACGGATGTTATTGTCACAGGGGAAAATGGCACCATAGATGGTCAGGGTGCATTTTGGTGGCAACAATTTCACAGAAAAAAATTGAAGTACACTCGTCCATATCTGATTGAACTTATGTTCTCAGACAGCATCCAAATCTCAAATCTAACTCTCCTTAATTCTCCATCATGGAATGTTCATCCTGTTTACAGCAGCAACATTATTATACAAGGCATCACAATCATTGCTCCTATCTCATCTCCTAACACTGATGGTATCAACCCAGATTCTTGCACAAATACAAAAATTGAAGACTGCTACATAGTTTCTGGGGATGACTGTGTTGCTGTGAAGAGTGGATGGGATGAGTATGGCATCAAATTTGGCTGGCCTACAAAACAACTAGTAATCAGAAGACTAACATGCATTTCACCATTCAGTGCAACCATTGCCTTAGGGAGTGAGATGTCAGGAGGGATACAAGATGTCAGAGCCGAAGACATTACAGCCATTCGAACTGAATCAGGTGTTAGAATCAAAACAGCTGTTGGTAGAGGAGGGTATGTGAAGGACATATATGTAAAAAGATTTACCATGCATACTATGAAATGGGCATTTAAGATGACAGGTGATTATAATTCACATGCTGATACTCACTTTGACCCTAATGCTTTGCCTGAGATTGCAAATATCAACTATAGAGATGTTGTGGCTGAGAATGTTACCATAGCAGCTAGGTTTCAAGGAATCTCTAATGACCCTTTTAAGGGAATTTGCATTGCAAACGTGACACTAGGGATGGCTGTTAAGGCCAAGAAAAGGTCATGGACATGCACTGATATTGAAGGGATGACTAGCAGTGTGACGCCTCCGCCTTGTGATCTGTTGCCTGATCAAGGGCCTGAGAAAATCGGGGCCTGTGATTTCCCAGCAGAGAGTTTACCTATTGATAATTTGGAGCTTAAGAAGTGTAGTTACAGCATGAAATATGTAATGTAG
Protein sequence

>Msa1067320

MAMLILQVIKIIFALFVVTLVYPERVESRKAKIVTTSFEYNGINCRAHSASLTDFGGVGDGNTSNTKAFESAISHLSQYGSQGGSQLYVPAGKWLTGSFSLTSHFTLYLDKDAVLLASQDITEWPALEPLPSYGRGRDAPAGRFRSFIFGTNLTDVIVTGENGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGMTSSVTPPPCDLLPDQGPEKIGACDFPAESLPIDNLELKKCSYSMKYVM*