Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067880 | XP_024626251.1 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 2.80e-51 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067880 | A2Q1P9 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 1.34e-51 | 166 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028750 | Msa1067880 | 0.844443 | 7.535622e-59 | -8.615850e-47 |
| Msa1067880 | Msa1395610 | 0.983224 | 3.662856e-157 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067880 | MtrunA17_Chr7g0249041 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 2.57e-55 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067880 | AT4G30390.1 | 65.476 | 84 | 29 | 0 | 4 | 87 | 5 | 88 | 3.36e-36 | 118 |
Find 172 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAAATCCTTCGGGAATT+TGG | 0.098316 | 7_2:+62827965 | None:intergenic |
| AAAATAAAATAGTACTTATT+TGG | 0.147564 | 7_2:-62826748 | Msa1067880:three_prime_UTR |
| GGTTACGCTTGTAGATATTT+TGG | 0.181272 | 7_2:-62827877 | Msa1067880:three_prime_UTR |
| ACCCCACTTCGGAGGCTAAA+TGG | 0.182922 | 7_2:+62827664 | None:intergenic |
| ACACAAAATCAATTAGAATT+AGG | 0.213662 | 7_2:+62829820 | None:intergenic |
| GCCAACTAATTCTCGGTTAA+AGG | 0.225160 | 7_2:+62827486 | None:intergenic |
| CGGAGATGTCGGAGAGATTA+AGG | 0.252011 | 7_2:+62829569 | None:intergenic |
| GACTTCCATTCATTCATAAA+AGG | 0.270719 | 7_2:+62828045 | None:intergenic |
| CCCAGCATTGGTCCCAGCTT+TGG | 0.273271 | 7_2:-62827464 | Msa1067880:three_prime_UTR |
| CAATAACCTGGGTGCATGTT+TGG | 0.279846 | 7_2:+62826875 | None:intergenic |
| TTCTTTCTTCAAGCTGTCTA+TGG | 0.288528 | 7_2:+62827300 | None:intergenic |
| CATCCTCCATTAGGATTTGT+AGG | 0.298893 | 7_2:-62827031 | Msa1067880:three_prime_UTR |
| GAATTTGGAGTTCTTCCTTC+AGG | 0.313980 | 7_2:+62827980 | None:intergenic |
| CTGAGAAGGAGAGAGAAAAT+AGG | 0.315789 | 7_2:-62829701 | Msa1067880:five_prime_UTR |
| CACAAAATCAATTAGAATTA+GGG | 0.327977 | 7_2:+62829821 | None:intergenic |
| CACCCAGGTTATTGCCCTAA+TGG | 0.329093 | 7_2:-62826866 | Msa1067880:three_prime_UTR |
| AAGTTGTTCCTTCACTGATT+TGG | 0.332158 | 7_2:+62827177 | None:intergenic |
| TACGAAATATATAAGCCATT+AGG | 0.335934 | 7_2:+62826851 | None:intergenic |
| AATTTGTTGTTTATATAAAC+AGG | 0.340916 | 7_2:-62829664 | Msa1067880:five_prime_UTR |
| TGTTGTATTGCTTTACCATT+TGG | 0.341999 | 7_2:-62826705 | Msa1067880:three_prime_UTR |
| AACTCAACAGGCTTAAATTA+AGG | 0.343033 | 7_2:-62828191 | Msa1067880:three_prime_UTR |
| ACGAAATATATAAGCCATTA+GGG | 0.343120 | 7_2:+62826852 | None:intergenic |
| AGGCGGCCAATCTAGACTTT+TGG | 0.343637 | 7_2:-62828171 | Msa1067880:three_prime_UTR |
| AACTCACTGGTAGGAAGAAC+AGG | 0.344126 | 7_2:+62828354 | None:intergenic |
| GAGTTGTTTCATCCTCCATT+AGG | 0.351348 | 7_2:-62827040 | Msa1067880:three_prime_UTR |
| AACTAATAGTTGGCATGGTC+TGG | 0.355399 | 7_2:-62827062 | Msa1067880:three_prime_UTR |
| ACTATTAGTTCACGAGCTTC+AGG | 0.358178 | 7_2:+62827075 | None:intergenic |
| CAGGATCTTTGACTATTATC+AGG | 0.362076 | 7_2:+62828004 | None:intergenic |
| CTGAAACTGTTTATAGCAAC+TGG | 0.365834 | 7_2:-62828432 | Msa1067880:CDS |
| ACCAAAGCTGGGACCAATGC+TGG | 0.375478 | 7_2:+62827463 | None:intergenic |
| TCCACTTCTATTCGCTTCTC+TGG | 0.381049 | 7_2:-62827898 | Msa1067880:three_prime_UTR |
| GACTATTATCAGGTGGAAAC+GGG | 0.402580 | 7_2:+62828014 | None:intergenic |
| ATGGGAAGGGGTGAAATTGA+TGG | 0.404928 | 7_2:-62827278 | Msa1067880:three_prime_UTR |
| CCCCACTTCGGAGGCTAAAT+GGG | 0.405485 | 7_2:+62827665 | None:intergenic |
| GTCCCAGCTTTGGTGTTGGC+AGG | 0.407640 | 7_2:-62827454 | Msa1067880:three_prime_UTR |
| ATCTCGACCACGCAGTCCTC+TGG | 0.407680 | 7_2:+62827202 | None:intergenic |
| GACATCTGCACTAAATCCTT+CGG | 0.408413 | 7_2:+62827957 | None:intergenic |
| TCTCCTGCCAACACCAAAGC+TGG | 0.408713 | 7_2:+62827451 | None:intergenic |
| CACAAACCAAAAGTCTAGAT+TGG | 0.413516 | 7_2:+62828165 | None:intergenic |
| ACGTTTGACTCCAACTCAAC+AGG | 0.414739 | 7_2:-62828203 | Msa1067880:three_prime_UTR |
| GTTTAGATTGGTGATGTGTT+AGG | 0.416435 | 7_2:-62826997 | Msa1067880:three_prime_UTR |
| GTGTGGACTGTGGCTCAATC+TGG | 0.418802 | 7_2:-62827626 | Msa1067880:three_prime_UTR |
| CATTCTTCTAGATCTCTTCC+TGG | 0.422448 | 7_2:-62829524 | Msa1067880:intron |
| AGATCTAGAAGAATGTGATC+AGG | 0.429631 | 7_2:+62829532 | None:intergenic |
| CTCACTCCTACAAATCCTAA+TGG | 0.431086 | 7_2:+62827025 | None:intergenic |
| ACATCTGCACTAAATCCTTC+GGG | 0.431937 | 7_2:+62827958 | None:intergenic |
| TGACTATTATCAGGTGGAAA+CGG | 0.435701 | 7_2:+62828013 | None:intergenic |
| TTAAAGAAGAAAGGTGTAGC+AGG | 0.438138 | 7_2:+62827736 | None:intergenic |
| TCAGATTATTAAAGAATTCG+TGG | 0.449660 | 7_2:+62829720 | None:intergenic |
| AAAGTGGGTTGCCGTATGTT+TGG | 0.450892 | 7_2:-62827342 | Msa1067880:three_prime_UTR |
| ACCCATTTAGCCTCCGAAGT+GGG | 0.451793 | 7_2:-62827666 | Msa1067880:three_prime_UTR |
| GCCTTTAACCGAGAATTAGT+TGG | 0.454901 | 7_2:-62827487 | Msa1067880:three_prime_UTR |
| GGGAAACTGTGGAAGATATA+TGG | 0.454942 | 7_2:-62827414 | Msa1067880:three_prime_UTR |
| AAGCCATTAGGGCAATAACC+TGG | 0.466614 | 7_2:+62826863 | None:intergenic |
| TAGACAGCTTGAAGAAAGAA+TGG | 0.467447 | 7_2:-62827297 | Msa1067880:three_prime_UTR |
| CGCTGATGCCATGGCAGAGT+GGG | 0.477662 | 7_2:-62827125 | Msa1067880:three_prime_UTR |
| AATTTGGAGTTCTTCCTTCA+GGG | 0.480278 | 7_2:+62827981 | None:intergenic |
| TTAATTTAAGCCTGTTGAGT+TGG | 0.483064 | 7_2:+62828193 | None:intergenic |
| TATCTTGAATTCCTCTGTGT+TGG | 0.484553 | 7_2:+62827571 | None:intergenic |
| GAACAAAATCTGCACCCTTA+CGG | 0.484567 | 7_2:+62827695 | None:intergenic |
| GAGTGAGTGCATGTTTAGAT+TGG | 0.485799 | 7_2:-62827009 | Msa1067880:three_prime_UTR |
| ATTAAGGACGGCTGAGTCAA+TGG | 0.488201 | 7_2:+62829585 | None:intergenic |
| ATGCTGGGCCAACTAATTCT+CGG | 0.493427 | 7_2:+62827479 | None:intergenic |
| CTTTCATTTCTCCAAACATA+CGG | 0.497867 | 7_2:+62827331 | None:intergenic |
| GAGCCTGTGTTGGCGCATCT+AGG | 0.503951 | 7_2:+62827599 | None:intergenic |
| ATCAGGGATGAGAGAGAGAT+CGG | 0.511014 | 7_2:+62829549 | None:intergenic |
| TATAGTGTATTAAAGAAGAA+AGG | 0.512361 | 7_2:+62827727 | None:intergenic |
| GCGTGACTGAGTTAGATTGA+AGG | 0.512473 | 7_2:-62826773 | Msa1067880:three_prime_UTR |
| GGAAAGAACACAGAGATTGA+TGG | 0.516782 | 7_2:-62829755 | Msa1067880:five_prime_UTR |
| TGGCAGAGTGGGTTAAGCTC+TGG | 0.517333 | 7_2:-62827114 | Msa1067880:three_prime_UTR |
| TGGAGTTCTTCCTTCAGGGC+AGG | 0.518206 | 7_2:+62827985 | None:intergenic |
| TTCGAAAGCCGCTGATGCCA+TGG | 0.519664 | 7_2:-62827134 | Msa1067880:three_prime_UTR |
| AGAATTAGTTGGCCCAGCAT+TGG | 0.520079 | 7_2:-62827476 | Msa1067880:three_prime_UTR |
| ATTGGTCCCAGCTTTGGTGT+TGG | 0.521152 | 7_2:-62827458 | Msa1067880:three_prime_UTR |
| GCTTTGGTGTTGGCAGGAGA+AGG | 0.521241 | 7_2:-62827448 | Msa1067880:three_prime_UTR |
| AAATCAGTGAAGGAACAACT+TGG | 0.521373 | 7_2:-62827175 | Msa1067880:three_prime_UTR |
| AACTTTACAGACTGAAAGAA+AGG | 0.521592 | 7_2:+62827244 | None:intergenic |
| CTAAGCCTCGGTGTGAAAAG+TGG | 0.526128 | 7_2:-62827358 | Msa1067880:three_prime_UTR |
| GAAGCTCGTGAACTAATAGT+TGG | 0.527744 | 7_2:-62827072 | Msa1067880:three_prime_UTR |
| GAGAGAGAGATCGGAGATGT+CGG | 0.529629 | 7_2:+62829558 | None:intergenic |
| GGTATTTGAATAAAATTCCA+AGG | 0.532112 | 7_2:-62826684 | Msa1067880:three_prime_UTR |
| AGACAGCTTGAAGAAAGAAT+GGG | 0.532129 | 7_2:-62827296 | Msa1067880:three_prime_UTR |
| CCAAAGCTGGGACCAATGCT+GGG | 0.532879 | 7_2:+62827464 | None:intergenic |
| GTGCAGAGAATATTGAAAGC+TGG | 0.536542 | 7_2:-62828474 | Msa1067880:intron |
| GTTTATAGCAACTGGTAATG+AGG | 0.537844 | 7_2:-62828424 | Msa1067880:CDS |
| CTCTGAAATTGAGCGAGTGG+TGG | 0.538006 | 7_2:-62827926 | Msa1067880:three_prime_UTR |
| AATTTGAAAAGAAGAAATAG+AGG | 0.541103 | 7_2:-62829780 | Msa1067880:five_prime_UTR |
| AGTCAAAGATCCTGCCCTGA+AGG | 0.547063 | 7_2:-62827995 | Msa1067880:three_prime_UTR |
| ACTATATGATCCATTCCGTA+AGG | 0.553697 | 7_2:-62827710 | Msa1067880:three_prime_UTR |
| CAGGAGAAGGAAAGCTCAGG+TGG | 0.555962 | 7_2:-62827435 | Msa1067880:three_prime_UTR |
| CTCCTGCCAACACCAAAGCT+GGG | 0.557867 | 7_2:+62827452 | None:intergenic |
| GATTCCACTCACTGGCAACA+TGG | 0.560139 | 7_2:+62827516 | None:intergenic |
| CCCATTTAGCCTCCGAAGTG+GGG | 0.561643 | 7_2:-62827665 | Msa1067880:three_prime_UTR |
| ACCAGAGAAGCGAATAGAAG+TGG | 0.561782 | 7_2:+62827897 | None:intergenic |
| GTTGGCTTGAGAGCCTGTGT+TGG | 0.565124 | 7_2:+62827589 | None:intergenic |
| CAAGGTCTTGCTAATGCTGA+TGG | 0.566230 | 7_2:-62826666 | Msa1067880:three_prime_UTR |
| CATCAGCATTAGCAAGACCT+TGG | 0.568457 | 7_2:+62826667 | None:intergenic |
| AGAGGACTGCGTGGTCGAGA+TGG | 0.569270 | 7_2:-62827200 | Msa1067880:three_prime_UTR |
| AAATCTGCACCCTTACGGAA+TGG | 0.569993 | 7_2:+62827700 | None:intergenic |
| TAAAGCTTCCGCAGAAATCA+CGG | 0.572456 | 7_2:+62826958 | None:intergenic |
| TCTGAAATTGAGCGAGTGGT+GGG | 0.574447 | 7_2:-62827925 | Msa1067880:three_prime_UTR |
| GTGTTAGGCAAAATCATTGT+GGG | 0.575816 | 7_2:-62826982 | Msa1067880:three_prime_UTR |
| GTTGATTGTGCTCTGTCGTG+TGG | 0.577748 | 7_2:-62827643 | Msa1067880:three_prime_UTR |
| AGACCTAGATGCGCCAACAC+AGG | 0.578067 | 7_2:-62827602 | Msa1067880:three_prime_UTR |
| GTTAAGCTCTGGAAGTCAGT+TGG | 0.579934 | 7_2:-62827103 | Msa1067880:three_prime_UTR |
| GATCTAGAAGAATGTGATCA+GGG | 0.580760 | 7_2:+62829533 | None:intergenic |
| TCGTGAACTAATAGTTGGCA+TGG | 0.583069 | 7_2:-62827067 | Msa1067880:three_prime_UTR |
| GCAATGTTGATTCCACTCAC+TGG | 0.584544 | 7_2:+62827508 | None:intergenic |
| TGGCAGGAGAAGGAAAGCTC+AGG | 0.584833 | 7_2:-62827438 | Msa1067880:three_prime_UTR |
| TGAAAAGAAGAAATAGAGGA+CGG | 0.585737 | 7_2:-62829776 | Msa1067880:five_prime_UTR |
| AGAGCCATGTTGCCAGTGAG+TGG | 0.586101 | 7_2:-62827520 | Msa1067880:three_prime_UTR |
| ATGGTGAGAGAAAGTAATGA+TGG | 0.588762 | 7_2:+62829604 | None:intergenic |
| ATTATTAAAGAATTCGTGGA+GGG | 0.591719 | 7_2:+62829724 | None:intergenic |
| AATTCTTTAATAATCTGAGA+AGG | 0.593117 | 7_2:-62829715 | Msa1067880:five_prime_UTR |
| GCTTGAAGAAAGAATGGGAA+GGG | 0.593851 | 7_2:-62827291 | Msa1067880:three_prime_UTR |
| GAGCTTAACCCACTCTGCCA+TGG | 0.594397 | 7_2:+62827117 | None:intergenic |
| TAAGCCTCGGTGTGAAAAGT+GGG | 0.598697 | 7_2:-62827357 | Msa1067880:three_prime_UTR |
| TAAAGAAGAAAGGTGTAGCA+GGG | 0.600590 | 7_2:+62827737 | None:intergenic |
| CTATATGATCCATTCCGTAA+GGG | 0.604465 | 7_2:-62827709 | Msa1067880:three_prime_UTR |
| GCAGGGTTCAGCGTGTGAAG+AGG | 0.606108 | 7_2:-62829942 | Msa1067880:five_prime_UTR |
| CCACTCTGCCATGGCATCAG+CGG | 0.607023 | 7_2:+62827126 | None:intergenic |
| GTGCTCTGTCGTGTGGACTG+TGG | 0.608262 | 7_2:-62827636 | Msa1067880:three_prime_UTR |
| TATGTTTGGAGAAATGAAAG+AGG | 0.608956 | 7_2:-62827328 | Msa1067880:three_prime_UTR |
| AAAGCTCAGGTGGGAAACTG+TGG | 0.612768 | 7_2:-62827425 | Msa1067880:three_prime_UTR |
| CGAGATGGCCAAATCAGTGA+AGG | 0.615435 | 7_2:-62827185 | Msa1067880:three_prime_UTR |
| AACGAAGTTGACATTGTGAT+CGG | 0.616081 | 7_2:-62828090 | Msa1067880:three_prime_UTR |
| GATCTTTGACTATTATCAGG+TGG | 0.616826 | 7_2:+62828007 | None:intergenic |
| GTATGCGACCACCTAAGCCT+CGG | 0.617533 | 7_2:-62827370 | Msa1067880:three_prime_UTR |
| CCGCTGATGCCATGGCAGAG+TGG | 0.618375 | 7_2:-62827126 | Msa1067880:three_prime_UTR |
| TTGTGGGACCGTGATTTCTG+CGG | 0.619208 | 7_2:-62826966 | Msa1067880:three_prime_UTR |
| AAGGTGTAGCAGGGGTCTTG+AGG | 0.619352 | 7_2:+62827746 | None:intergenic |
| AGTGAAGGAACAACTTGGGA+AGG | 0.619719 | 7_2:-62827170 | Msa1067880:three_prime_UTR |
| TACCCATTTAGCCTCCGAAG+TGG | 0.620536 | 7_2:-62827667 | Msa1067880:three_prime_UTR |
| AGAGAAGCGAATAGAAGTGG+AGG | 0.622245 | 7_2:+62827900 | None:intergenic |
| CAACATGGCTCTCGTAGGAA+CGG | 0.623643 | 7_2:+62827531 | None:intergenic |
| AATCAGTGAAGGAACAACTT+GGG | 0.624801 | 7_2:-62827174 | Msa1067880:three_prime_UTR |
| ATTCATTCATAAAAGGAGTG+AGG | 0.628201 | 7_2:+62828052 | None:intergenic |
| GGAAGGGGTGAAATTGATGG+AGG | 0.629194 | 7_2:-62827275 | Msa1067880:three_prime_UTR |
| AAACTCTGAAATTGAGCGAG+TGG | 0.630141 | 7_2:-62827929 | Msa1067880:three_prime_UTR |
| AGCCATTAGGGCAATAACCT+GGG | 0.630899 | 7_2:+62826864 | None:intergenic |
| GAACAGGGGTCACAATATGT+CGG | 0.636120 | 7_2:+62828370 | None:intergenic |
| GAGCACAATCAACCCCACTT+CGG | 0.641756 | 7_2:+62827653 | None:intergenic |
| CACAATCAACCCCACTTCGG+AGG | 0.642239 | 7_2:+62827656 | None:intergenic |
| CTTGAAGAAAGAATGGGAAG+GGG | 0.643591 | 7_2:-62827290 | Msa1067880:three_prime_UTR |
| ACTGGCAACATGGCTCTCGT+AGG | 0.644873 | 7_2:+62827526 | None:intergenic |
| AAAGAAGAAAGGTGTAGCAG+GGG | 0.647705 | 7_2:+62827738 | None:intergenic |
| GTTCCAGCAAAAGATGACGC+GGG | 0.649072 | 7_2:-62827805 | Msa1067880:three_prime_UTR |
| AAAATCAATTAGAATTAGGG+AGG | 0.650213 | 7_2:+62829824 | None:intergenic |
| TCTGGCGTCGTAGCTGATTG+CGG | 0.652191 | 7_2:+62827220 | None:intergenic |
| ATTACTTGAGACATCTTGTG+AGG | 0.652560 | 7_2:+62828123 | None:intergenic |
| AGCTTGAAGAAAGAATGGGA+AGG | 0.654031 | 7_2:-62827292 | Msa1067880:three_prime_UTR |
| TCAGCGGCTTTCGAAAACAT+AGG | 0.655253 | 7_2:+62827142 | None:intergenic |
| GCAATCAGCTACGACGCCAG+AGG | 0.657417 | 7_2:-62827218 | Msa1067880:three_prime_UTR |
| GGGGAATGTAGTAGATGCTG+TGG | 0.657954 | 7_2:-62827785 | Msa1067880:three_prime_UTR |
| TTCCAGCAAAAGATGACGCG+GGG | 0.659790 | 7_2:-62827804 | Msa1067880:three_prime_UTR |
| TGTTCCAGCAAAAGATGACG+CGG | 0.661904 | 7_2:-62827806 | Msa1067880:three_prime_UTR |
| GAGTTTGAGAGAATCACAGT+GGG | 0.666636 | 7_2:+62826907 | None:intergenic |
| ACTCCTACAAATCCTAATGG+AGG | 0.670063 | 7_2:+62827028 | None:intergenic |
| TCAACAGGCTTAAATTAAGG+CGG | 0.673941 | 7_2:-62828188 | Msa1067880:three_prime_UTR |
| GATGTCGGAGAGATTAAGGA+CGG | 0.674146 | 7_2:+62829573 | None:intergenic |
| GAAGAACTCCAAATTCCCGA+AGG | 0.676927 | 7_2:-62827973 | Msa1067880:three_prime_UTR |
| GTGAATCCAAACATGCACCC+AGG | 0.681674 | 7_2:-62826881 | Msa1067880:three_prime_UTR |
| AGGAGAAGGAAAGCTCAGGT+GGG | 0.684548 | 7_2:-62827434 | Msa1067880:three_prime_UTR |
| ACTGTGGAAGATATATGGTG+TGG | 0.687243 | 7_2:-62827409 | Msa1067880:three_prime_UTR |
| GATTATTAAAGAATTCGTGG+AGG | 0.687349 | 7_2:+62829723 | None:intergenic |
| ACAGAGGAATTCAAGATACG+TGG | 0.688219 | 7_2:-62827566 | Msa1067880:three_prime_UTR |
| ACTCACTGGTAGGAAGAACA+GGG | 0.694442 | 7_2:+62828355 | None:intergenic |
| TGTGTTAGGCAAAATCATTG+TGG | 0.720022 | 7_2:-62826983 | Msa1067880:three_prime_UTR |
| GTGAGAGAAAGTAATGATGG+CGG | 0.736980 | 7_2:+62829607 | None:intergenic |
| TGAGTTTGAGAGAATCACAG+TGG | 0.743087 | 7_2:+62826906 | None:intergenic |
| CTCACTGGTAGGAAGAACAG+GGG | 0.761648 | 7_2:+62828356 | None:intergenic |
| AGGCTCTCAAGCCAACACAG+AGG | 0.778427 | 7_2:-62827582 | Msa1067880:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACTTATGATTATATAATA+TGG | + | chr7_2:62827273-62827292 | None:intergenic | 10.0% |
| !!! | AAAATTTTATCATGTATTTA+TGG | - | chr7_2:62828262-62828281 | Msa1067880:intron | 10.0% |
| !! | ATATTTGTAAATTATTATAC+AGG | - | chr7_2:62828320-62828339 | Msa1067880:intron | 10.0% |
| !! | AAAATAAAATAGTACTTATT+TGG | - | chr7_2:62829840-62829859 | Msa1067880:five_prime_UTR | 10.0% |
| !!! | AATTTGTTGTTTATATAAAC+AGG | - | chr7_2:62826924-62826943 | Msa1067880:three_prime_UTR | 15.0% |
| !! | AATAAAGAAAAATTGAGAAA+GGG | + | chr7_2:62827161-62827180 | None:intergenic | 15.0% |
| !! | AAATAAAGAAAAATTGAGAA+AGG | + | chr7_2:62827162-62827181 | None:intergenic | 15.0% |
| !! | ATCAACAAAAAAAAACAAAA+GGG | + | chr7_2:62827203-62827222 | None:intergenic | 15.0% |
| !! | TATCAACAAAAAAAAACAAA+AGG | + | chr7_2:62827204-62827223 | None:intergenic | 15.0% |
| !! | ATGATTATATAATATGGATA+AGG | + | chr7_2:62827267-62827286 | None:intergenic | 15.0% |
| !!! | ATACTCATTTATCTTTTTTA+TGG | - | chr7_2:62827719-62827738 | Msa1067880:three_prime_UTR | 15.0% |
| !!! | TACTCATTTATCTTTTTTAT+GGG | - | chr7_2:62827720-62827739 | Msa1067880:three_prime_UTR | 15.0% |
| !!! | AAAATTTTAAAATAACTCAC+TGG | + | chr7_2:62828250-62828269 | None:intergenic | 15.0% |
| !!! | AATTTTATTCAAATACCAAA+TGG | + | chr7_2:62829901-62829920 | None:intergenic | 15.0% |
| !!! | AAAGTGGAACAAAATTTTAT+CGG | - | chr7_2:62826671-62826690 | Msa1067880:three_prime_UTR | 20.0% |
| !! | CACAAAATCAATTAGAATTA+GGG | + | chr7_2:62826770-62826789 | None:intergenic | 20.0% |
| !! | ACACAAAATCAATTAGAATT+AGG | + | chr7_2:62826771-62826790 | None:intergenic | 20.0% |
| !! | AATTTGAAAAGAAGAAATAG+AGG | - | chr7_2:62826808-62826827 | Msa1067880:three_prime_UTR | 20.0% |
| !! | AATTCTTTAATAATCTGAGA+AGG | - | chr7_2:62826873-62826892 | Msa1067880:three_prime_UTR | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+AGG | + | chr7_2:62827451-62827470 | None:intergenic | 20.0% |
| !!! | ACTCATTTATCTTTTTTATG+GGG | - | chr7_2:62827721-62827740 | Msa1067880:three_prime_UTR | 20.0% |
| !! | ACTTAATTATAGACAACAAA+AGG | + | chr7_2:62828012-62828031 | None:intergenic | 20.0% |
| !! | TATAGTGTATTAAAGAAGAA+AGG | + | chr7_2:62828864-62828883 | None:intergenic | 20.0% |
| ! | AAAATCAATTAGAATTAGGG+AGG | + | chr7_2:62826767-62826786 | None:intergenic | 25.0% |
| !!! | ATTGATTTTGTGTTGACAAA+TGG | - | chr7_2:62826778-62826797 | Msa1067880:three_prime_UTR | 25.0% |
| ! | ATTATTAAAGAATTCGTGGA+GGG | + | chr7_2:62826867-62826886 | None:intergenic | 25.0% |
| ! | TCAGATTATTAAAGAATTCG+TGG | + | chr7_2:62826871-62826890 | None:intergenic | 25.0% |
| !! | TAATGTTGTTTGCTTCTTTA+GGG | - | chr7_2:62827295-62827314 | Msa1067880:three_prime_UTR | 25.0% |
| ! | TTACAATTACTCTTGTAGTA+TGG | - | chr7_2:62827329-62827348 | Msa1067880:three_prime_UTR | 25.0% |
| ! | TTGTCTTTAGATGAATTTGT+TGG | - | chr7_2:62827383-62827402 | Msa1067880:three_prime_UTR | 25.0% |
| !! | TTAATATTTGATAGCCCAAT+AGG | + | chr7_2:62827827-62827846 | None:intergenic | 25.0% |
| ! | CTTACTAATTTGATCAGATA+AGG | + | chr7_2:62827895-62827914 | None:intergenic | 25.0% |
| ! | CTTATCTGATCAAATTAGTA+AGG | - | chr7_2:62827893-62827912 | Msa1067880:three_prime_UTR | 25.0% |
| !!! | CAGGATTTTGATTCATAATT+TGG | - | chr7_2:62827957-62827976 | Msa1067880:three_prime_UTR | 25.0% |
| ! | GATTTGATATATTGTAGATC+TGG | - | chr7_2:62827979-62827998 | Msa1067880:three_prime_UTR | 25.0% |
| !! | TATGCTAAAGTTTCTTCTTT+TGG | - | chr7_2:62828048-62828067 | Msa1067880:three_prime_UTR | 25.0% |
| !!! | TTTTAAAATAACTCACTGGT+AGG | + | chr7_2:62828246-62828265 | None:intergenic | 25.0% |
| ! | ACGAAATATATAAGCCATTA+GGG | + | chr7_2:62829739-62829758 | None:intergenic | 25.0% |
| ! | TACGAAATATATAAGCCATT+AGG | + | chr7_2:62829740-62829759 | None:intergenic | 25.0% |
| ! | GGTATTTGAATAAAATTCCA+AGG | - | chr7_2:62829904-62829923 | Msa1067880:five_prime_UTR | 25.0% |
| TGAAAAGAAGAAATAGAGGA+CGG | - | chr7_2:62826812-62826831 | Msa1067880:three_prime_UTR | 30.0% | |
| GATTATTAAAGAATTCGTGG+AGG | + | chr7_2:62826868-62826887 | None:intergenic | 30.0% | |
| GAGAGAATAAAAAGAATACC+AGG | + | chr7_2:62827085-62827104 | None:intergenic | 30.0% | |
| GTAGTTACTACTAGCTAATA+AGG | - | chr7_2:62827132-62827151 | Msa1067880:three_prime_UTR | 30.0% | |
| TATAATATGGATAAGGTCAC+AGG | + | chr7_2:62827260-62827279 | None:intergenic | 30.0% | |
| ! | GTAATGTTGTTTGCTTCTTT+AGG | - | chr7_2:62827294-62827313 | Msa1067880:three_prime_UTR | 30.0% |
| AGATTGTAGTTGGATCATTT+AGG | - | chr7_2:62827642-62827661 | Msa1067880:three_prime_UTR | 30.0% | |
| !! | GTGCCATCATTTTCTTATTT+GGG | - | chr7_2:62827763-62827782 | Msa1067880:three_prime_UTR | 30.0% |
| !! | CATCATTTTCTTATTTGGGA+GGG | - | chr7_2:62827767-62827786 | Msa1067880:three_prime_UTR | 30.0% |
| TATGAATCAAAATCCTGACA+AGG | + | chr7_2:62827954-62827973 | None:intergenic | 30.0% | |
| GAAAATTAAGAAATGCGATG+AGG | + | chr7_2:62828091-62828110 | None:intergenic | 30.0% | |
| TTAATTTAAGCCTGTTGAGT+TGG | + | chr7_2:62828398-62828417 | None:intergenic | 30.0% | |
| AACTCAACAGGCTTAAATTA+AGG | - | chr7_2:62828397-62828416 | Msa1067880:CDS | 30.0% | |
| ATTCATTCATAAAAGGAGTG+AGG | + | chr7_2:62828539-62828558 | None:intergenic | 30.0% | |
| ! | TCACTCCTTTTATGAATGAA+TGG | - | chr7_2:62828538-62828557 | Msa1067880:intron | 30.0% |
| GACTTCCATTCATTCATAAA+AGG | + | chr7_2:62828546-62828565 | None:intergenic | 30.0% | |
| CTTTCATTTCTCCAAACATA+CGG | + | chr7_2:62829260-62829279 | None:intergenic | 30.0% | |
| TATGTTTGGAGAAATGAAAG+AGG | - | chr7_2:62829260-62829279 | Msa1067880:intron | 30.0% | |
| AACTTTACAGACTGAAAGAA+AGG | + | chr7_2:62829347-62829366 | None:intergenic | 30.0% | |
| TGTTGTATTGCTTTACCATT+TGG | - | chr7_2:62829883-62829902 | Msa1067880:five_prime_UTR | 30.0% | |
| ATGGTGAGAGAAAGTAATGA+TGG | + | chr7_2:62826987-62827006 | None:intergenic | 35.0% | |
| GATCTAGAAGAATGTGATCA+GGG | + | chr7_2:62827058-62827077 | None:intergenic | 35.0% | |
| AGATCTAGAAGAATGTGATC+AGG | + | chr7_2:62827059-62827078 | None:intergenic | 35.0% | |
| GTGAAAGTTGTTGTCAAATG+TGG | - | chr7_2:62827562-62827581 | Msa1067880:three_prime_UTR | 35.0% | |
| CACAATGTGCATGCAATTAA+GGG | + | chr7_2:62827596-62827615 | None:intergenic | 35.0% | |
| ATCTGAGAACAACTAAGACT+TGG | - | chr7_2:62827676-62827695 | Msa1067880:three_prime_UTR | 35.0% | |
| TCTGAGAACAACTAAGACTT+GGG | - | chr7_2:62827677-62827696 | Msa1067880:three_prime_UTR | 35.0% | |
| ! | GGGTTGAATTGATAGTTATG+TGG | - | chr7_2:62827741-62827760 | Msa1067880:three_prime_UTR | 35.0% |
| !! | GGTGCCATCATTTTCTTATT+TGG | - | chr7_2:62827762-62827781 | Msa1067880:three_prime_UTR | 35.0% |
| CCTCCCAAATAAGAAAATGA+TGG | + | chr7_2:62827769-62827788 | None:intergenic | 35.0% | |
| !! | CCATCATTTTCTTATTTGGG+AGG | - | chr7_2:62827766-62827785 | Msa1067880:three_prime_UTR | 35.0% |
| ! | TACCTTGTGCTTTTCCTATT+GGG | - | chr7_2:62827810-62827829 | Msa1067880:three_prime_UTR | 35.0% |
| ! | TTTTCAGCAGCCATAGAATT+TGG | - | chr7_2:62827928-62827947 | Msa1067880:three_prime_UTR | 35.0% |
| AATTAAGAAATGCGATGAGG+AGG | + | chr7_2:62828088-62828107 | None:intergenic | 35.0% | |
| CTTTCAATATTCTCTGCACA+TGG | + | chr7_2:62828113-62828132 | None:intergenic | 35.0% | |
| CTGAAACTGTTTATAGCAAC+TGG | - | chr7_2:62828156-62828175 | Msa1067880:three_prime_UTR | 35.0% | |
| ! | GTTTATAGCAACTGGTAATG+AGG | - | chr7_2:62828164-62828183 | Msa1067880:three_prime_UTR | 35.0% |
| TCAACAGGCTTAAATTAAGG+CGG | - | chr7_2:62828400-62828419 | Msa1067880:CDS | 35.0% | |
| CACAAACCAAAAGTCTAGAT+TGG | + | chr7_2:62828426-62828445 | None:intergenic | 35.0% | |
| ATTACTTGAGACATCTTGTG+AGG | + | chr7_2:62828468-62828487 | None:intergenic | 35.0% | |
| AACGAAGTTGACATTGTGAT+CGG | - | chr7_2:62828498-62828517 | Msa1067880:intron | 35.0% | |
| TGACTATTATCAGGTGGAAA+CGG | + | chr7_2:62828578-62828597 | None:intergenic | 35.0% | |
| GATCTTTGACTATTATCAGG+TGG | + | chr7_2:62828584-62828603 | None:intergenic | 35.0% | |
| CAGGATCTTTGACTATTATC+AGG | + | chr7_2:62828587-62828606 | None:intergenic | 35.0% | |
| ! | AATTTGGAGTTCTTCCTTCA+GGG | + | chr7_2:62828610-62828629 | None:intergenic | 35.0% |
| ! | GGTTACGCTTGTAGATATTT+TGG | - | chr7_2:62828711-62828730 | Msa1067880:intron | 35.0% |
| ! | TAAAGAAGAAAGGTGTAGCA+GGG | + | chr7_2:62828854-62828873 | None:intergenic | 35.0% |
| ! | TTAAAGAAGAAAGGTGTAGC+AGG | + | chr7_2:62828855-62828874 | None:intergenic | 35.0% |
| ACTATATGATCCATTCCGTA+AGG | - | chr7_2:62828878-62828897 | Msa1067880:intron | 35.0% | |
| CTATATGATCCATTCCGTAA+GGG | - | chr7_2:62828879-62828898 | Msa1067880:intron | 35.0% | |
| TATCTTGAATTCCTCTGTGT+TGG | + | chr7_2:62829020-62829039 | None:intergenic | 35.0% | |
| TTCTTTCTTCAAGCTGTCTA+TGG | + | chr7_2:62829291-62829310 | None:intergenic | 35.0% | |
| TAGACAGCTTGAAGAAAGAA+TGG | - | chr7_2:62829291-62829310 | Msa1067880:intron | 35.0% | |
| AGACAGCTTGAAGAAAGAAT+GGG | - | chr7_2:62829292-62829311 | Msa1067880:intron | 35.0% | |
| ! | AAGTTGTTCCTTCACTGATT+TGG | + | chr7_2:62829414-62829433 | None:intergenic | 35.0% |
| AAATCAGTGAAGGAACAACT+TGG | - | chr7_2:62829413-62829432 | Msa1067880:intron | 35.0% | |
| AATCAGTGAAGGAACAACTT+GGG | - | chr7_2:62829414-62829433 | Msa1067880:intron | 35.0% | |
| !! | GTTTAGATTGGTGATGTGTT+AGG | - | chr7_2:62829591-62829610 | Msa1067880:CDS | 35.0% |
| TGTGTTAGGCAAAATCATTG+TGG | - | chr7_2:62829605-62829624 | Msa1067880:CDS | 35.0% | |
| GTGTTAGGCAAAATCATTGT+GGG | - | chr7_2:62829606-62829625 | Msa1067880:CDS | 35.0% | |
| GGAAAGAACACAGAGATTGA+TGG | - | chr7_2:62826833-62826852 | Msa1067880:three_prime_UTR | 40.0% | |
| CTGAGAAGGAGAGAGAAAAT+AGG | - | chr7_2:62826887-62826906 | Msa1067880:three_prime_UTR | 40.0% | |
| GTGAGAGAAAGTAATGATGG+CGG | + | chr7_2:62826984-62827003 | None:intergenic | 40.0% | |
| CATTCTTCTAGATCTCTTCC+TGG | - | chr7_2:62827064-62827083 | Msa1067880:three_prime_UTR | 40.0% | |
| AAGTTTGAGAGAGAGAGAGA+GGG | + | chr7_2:62827107-62827126 | None:intergenic | 40.0% | |
| !! | GTTGACACACCTTTGATTTG+AGG | - | chr7_2:62827494-62827513 | Msa1067880:three_prime_UTR | 40.0% |
| GCACTAACACCTCAAATCAA+AGG | + | chr7_2:62827506-62827525 | None:intergenic | 40.0% | |
| ! | ATTTGAGGTGTTAGTGCTAG+AGG | - | chr7_2:62827509-62827528 | Msa1067880:three_prime_UTR | 40.0% |
| CCACAATGTGCATGCAATTA+AGG | + | chr7_2:62827597-62827616 | None:intergenic | 40.0% | |
| CCTTAATTGCATGCACATTG+TGG | - | chr7_2:62827594-62827613 | Msa1067880:three_prime_UTR | 40.0% | |
| GTTGCAGTCTAGATTGTAGT+TGG | - | chr7_2:62827632-62827651 | Msa1067880:three_prime_UTR | 40.0% | |
| ! | GTACCTTGTGCTTTTCCTAT+TGG | - | chr7_2:62827809-62827828 | Msa1067880:three_prime_UTR | 40.0% |
| TCAAATGTTCACAGCAACAG+GGG | + | chr7_2:62827872-62827891 | None:intergenic | 40.0% | |
| GTCAAATGTTCACAGCAACA+GGG | + | chr7_2:62827873-62827892 | None:intergenic | 40.0% | |
| GCTGCTGAAAAATTGTCAAC+AGG | + | chr7_2:62827919-62827938 | None:intergenic | 40.0% | |
| GTGCAGAGAATATTGAAAGC+TGG | - | chr7_2:62828114-62828133 | Msa1067880:three_prime_UTR | 40.0% | |
| GACTATTATCAGGTGGAAAC+GGG | + | chr7_2:62828577-62828596 | None:intergenic | 40.0% | |
| ! | GAATTTGGAGTTCTTCCTTC+AGG | + | chr7_2:62828611-62828630 | None:intergenic | 40.0% |
| CACTAAATCCTTCGGGAATT+TGG | + | chr7_2:62828626-62828645 | None:intergenic | 40.0% | |
| ACATCTGCACTAAATCCTTC+GGG | + | chr7_2:62828633-62828652 | None:intergenic | 40.0% | |
| GACATCTGCACTAAATCCTT+CGG | + | chr7_2:62828634-62828653 | None:intergenic | 40.0% | |
| !! | AAACTCTGAAATTGAGCGAG+TGG | - | chr7_2:62828659-62828678 | Msa1067880:intron | 40.0% |
| ! | AAAGAAGAAAGGTGTAGCAG+GGG | + | chr7_2:62828853-62828872 | None:intergenic | 40.0% |
| GAACAAAATCTGCACCCTTA+CGG | + | chr7_2:62828896-62828915 | None:intergenic | 40.0% | |
| ACAGAGGAATTCAAGATACG+TGG | - | chr7_2:62829022-62829041 | Msa1067880:intron | 40.0% | |
| GCCTTTAACCGAGAATTAGT+TGG | - | chr7_2:62829101-62829120 | Msa1067880:intron | 40.0% | |
| GCCAACTAATTCTCGGTTAA+AGG | + | chr7_2:62829105-62829124 | None:intergenic | 40.0% | |
| GGGAAACTGTGGAAGATATA+TGG | - | chr7_2:62829174-62829193 | Msa1067880:intron | 40.0% | |
| ACTGTGGAAGATATATGGTG+TGG | - | chr7_2:62829179-62829198 | Msa1067880:intron | 40.0% | |
| AGCTTGAAGAAAGAATGGGA+AGG | - | chr7_2:62829296-62829315 | Msa1067880:intron | 40.0% | |
| GCTTGAAGAAAGAATGGGAA+GGG | - | chr7_2:62829297-62829316 | Msa1067880:intron | 40.0% | |
| CTTGAAGAAAGAATGGGAAG+GGG | - | chr7_2:62829298-62829317 | Msa1067880:intron | 40.0% | |
| ACTATTAGTTCACGAGCTTC+AGG | + | chr7_2:62829516-62829535 | None:intergenic | 40.0% | |
| GAAGCTCGTGAACTAATAGT+TGG | - | chr7_2:62829516-62829535 | Msa1067880:intron | 40.0% | |
| TCGTGAACTAATAGTTGGCA+TGG | - | chr7_2:62829521-62829540 | Msa1067880:intron | 40.0% | |
| AACTAATAGTTGGCATGGTC+TGG | - | chr7_2:62829526-62829545 | Msa1067880:CDS | 40.0% | |
| ! | GAGTTGTTTCATCCTCCATT+AGG | - | chr7_2:62829548-62829567 | Msa1067880:CDS | 40.0% |
| CATCCTCCATTAGGATTTGT+AGG | - | chr7_2:62829557-62829576 | Msa1067880:CDS | 40.0% | |
| ACTCCTACAAATCCTAATGG+AGG | + | chr7_2:62829563-62829582 | None:intergenic | 40.0% | |
| CTCACTCCTACAAATCCTAA+TGG | + | chr7_2:62829566-62829585 | None:intergenic | 40.0% | |
| GAGTGAGTGCATGTTTAGAT+TGG | - | chr7_2:62829579-62829598 | Msa1067880:CDS | 40.0% | |
| TAAAGCTTCCGCAGAAATCA+CGG | + | chr7_2:62829633-62829652 | None:intergenic | 40.0% | |
| GAGTTTGAGAGAATCACAGT+GGG | + | chr7_2:62829684-62829703 | None:intergenic | 40.0% | |
| TGAGTTTGAGAGAATCACAG+TGG | + | chr7_2:62829685-62829704 | None:intergenic | 40.0% | |
| AGCGTGTGAAGAGGAAAAAG+TGG | - | chr7_2:62826655-62826674 | Msa1067880:three_prime_UTR | 45.0% | |
| ATTAAGGACGGCTGAGTCAA+TGG | + | chr7_2:62827006-62827025 | None:intergenic | 45.0% | |
| GATGTCGGAGAGATTAAGGA+CGG | + | chr7_2:62827018-62827037 | None:intergenic | 45.0% | |
| ATCAGGGATGAGAGAGAGAT+CGG | + | chr7_2:62827042-62827061 | None:intergenic | 45.0% | |
| GAAGTTTGAGAGAGAGAGAG+AGG | + | chr7_2:62827108-62827127 | None:intergenic | 45.0% | |
| AGTGCTAGAGGTTGTGTACA+AGG | - | chr7_2:62827521-62827540 | Msa1067880:three_prime_UTR | 45.0% | |
| ! | AGCCCAATAGGAAAAGCACA+AGG | + | chr7_2:62827815-62827834 | None:intergenic | 45.0% |
| GGTCAAATGTTCACAGCAAC+AGG | + | chr7_2:62827874-62827893 | None:intergenic | 45.0% | |
| CCTGACAAGGCCAAATTCTA+TGG | + | chr7_2:62827941-62827960 | None:intergenic | 45.0% | |
| !! | CCATAGAATTTGGCCTTGTC+AGG | - | chr7_2:62827938-62827957 | Msa1067880:three_prime_UTR | 45.0% |
| GAACAGGGGTCACAATATGT+CGG | + | chr7_2:62828221-62828240 | None:intergenic | 45.0% | |
| ACTCACTGGTAGGAAGAACA+GGG | + | chr7_2:62828236-62828255 | None:intergenic | 45.0% | |
| AACTCACTGGTAGGAAGAAC+AGG | + | chr7_2:62828237-62828256 | None:intergenic | 45.0% | |
| ACGTTTGACTCCAACTCAAC+AGG | - | chr7_2:62828385-62828404 | Msa1067880:CDS | 45.0% | |
| GAAGAACTCCAAATTCCCGA+AGG | - | chr7_2:62828615-62828634 | Msa1067880:intron | 45.0% | |
| ! | TCTGAAATTGAGCGAGTGGT+GGG | - | chr7_2:62828663-62828682 | Msa1067880:intron | 45.0% |
| AGAGAAGCGAATAGAAGTGG+AGG | + | chr7_2:62828691-62828710 | None:intergenic | 45.0% | |
| TCCACTTCTATTCGCTTCTC+TGG | - | chr7_2:62828690-62828709 | Msa1067880:intron | 45.0% | |
| ACCAGAGAAGCGAATAGAAG+TGG | + | chr7_2:62828694-62828713 | None:intergenic | 45.0% | |
| TGTTCCAGCAAAAGATGACG+CGG | - | chr7_2:62828782-62828801 | Msa1067880:intron | 45.0% | |
| AAATCTGCACCCTTACGGAA+TGG | + | chr7_2:62828891-62828910 | None:intergenic | 45.0% | |
| !! | AAGGGTGCAGATTTTGTTCG+CGG | - | chr7_2:62828897-62828916 | Msa1067880:intron | 45.0% |
| !! | GCAATGTTGATTCCACTCAC+TGG | + | chr7_2:62829083-62829102 | None:intergenic | 45.0% |
| ATGCTGGGCCAACTAATTCT+CGG | + | chr7_2:62829112-62829131 | None:intergenic | 45.0% | |
| AGAATTAGTTGGCCCAGCAT+TGG | - | chr7_2:62829112-62829131 | Msa1067880:intron | 45.0% | |
| ! | TAAGCCTCGGTGTGAAAAGT+GGG | - | chr7_2:62829231-62829250 | Msa1067880:intron | 45.0% |
| !! | AAAGTGGGTTGCCGTATGTT+TGG | - | chr7_2:62829246-62829265 | Msa1067880:intron | 45.0% |
| ATGGGAAGGGGTGAAATTGA+TGG | - | chr7_2:62829310-62829329 | Msa1067880:intron | 45.0% | |
| AGTGAAGGAACAACTTGGGA+AGG | - | chr7_2:62829418-62829437 | Msa1067880:intron | 45.0% | |
| TCAGCGGCTTTCGAAAACAT+AGG | + | chr7_2:62829449-62829468 | None:intergenic | 45.0% | |
| !! | GTTAAGCTCTGGAAGTCAGT+TGG | - | chr7_2:62829485-62829504 | Msa1067880:intron | 45.0% |
| CAATAACCTGGGTGCATGTT+TGG | + | chr7_2:62829716-62829735 | None:intergenic | 45.0% | |
| AGCCATTAGGGCAATAACCT+GGG | + | chr7_2:62829727-62829746 | None:intergenic | 45.0% | |
| AAGCCATTAGGGCAATAACC+TGG | + | chr7_2:62829728-62829747 | None:intergenic | 45.0% | |
| GCGTGACTGAGTTAGATTGA+AGG | - | chr7_2:62829815-62829834 | Msa1067880:five_prime_UTR | 45.0% | |
| CATCAGCATTAGCAAGACCT+TGG | + | chr7_2:62829924-62829943 | None:intergenic | 45.0% | |
| CAAGGTCTTGCTAATGCTGA+TGG | - | chr7_2:62829922-62829941 | Msa1067880:five_prime_UTR | 45.0% | |
| CGGAGATGTCGGAGAGATTA+AGG | + | chr7_2:62827022-62827041 | None:intergenic | 50.0% | |
| GAGAGAGAGATCGGAGATGT+CGG | + | chr7_2:62827033-62827052 | None:intergenic | 50.0% | |
| TTGCATGCACATTGTGGCTG+CGG | - | chr7_2:62827600-62827619 | Msa1067880:three_prime_UTR | 50.0% | |
| CTCACTGGTAGGAAGAACAG+GGG | + | chr7_2:62828235-62828254 | None:intergenic | 50.0% | |
| ! | AGGCGGCCAATCTAGACTTT+TGG | - | chr7_2:62828417-62828436 | Msa1067880:CDS | 50.0% |
| AGTCAAAGATCCTGCCCTGA+AGG | - | chr7_2:62828593-62828612 | Msa1067880:intron | 50.0% | |
| !! | CTCTGAAATTGAGCGAGTGG+TGG | - | chr7_2:62828662-62828681 | Msa1067880:intron | 50.0% |
| GTTCCAGCAAAAGATGACGC+GGG | - | chr7_2:62828783-62828802 | Msa1067880:intron | 50.0% | |
| TTCCAGCAAAAGATGACGCG+GGG | - | chr7_2:62828784-62828803 | Msa1067880:intron | 50.0% | |
| GGGGAATGTAGTAGATGCTG+TGG | - | chr7_2:62828803-62828822 | Msa1067880:intron | 50.0% | |
| TACCCATTTAGCCTCCGAAG+TGG | - | chr7_2:62828921-62828940 | Msa1067880:intron | 50.0% | |
| ACCCATTTAGCCTCCGAAGT+GGG | - | chr7_2:62828922-62828941 | Msa1067880:intron | 50.0% | |
| GAGCACAATCAACCCCACTT+CGG | + | chr7_2:62828938-62828957 | None:intergenic | 50.0% | |
| GTTGATTGTGCTCTGTCGTG+TGG | - | chr7_2:62828945-62828964 | Msa1067880:intron | 50.0% | |
| CAACATGGCTCTCGTAGGAA+CGG | + | chr7_2:62829060-62829079 | None:intergenic | 50.0% | |
| GATTCCACTCACTGGCAACA+TGG | + | chr7_2:62829075-62829094 | None:intergenic | 50.0% | |
| ! | ATTGGTCCCAGCTTTGGTGT+TGG | - | chr7_2:62829130-62829149 | Msa1067880:intron | 50.0% |
| AGGAGAAGGAAAGCTCAGGT+GGG | - | chr7_2:62829154-62829173 | Msa1067880:intron | 50.0% | |
| AAAGCTCAGGTGGGAAACTG+TGG | - | chr7_2:62829163-62829182 | Msa1067880:intron | 50.0% | |
| ! | TTTTCACACCGAGGCTTAGG+TGG | + | chr7_2:62829229-62829248 | None:intergenic | 50.0% |
| ! | CACTTTTCACACCGAGGCTT+AGG | + | chr7_2:62829232-62829251 | None:intergenic | 50.0% |
| ! | CTAAGCCTCGGTGTGAAAAG+TGG | - | chr7_2:62829230-62829249 | Msa1067880:intron | 50.0% |
| GGAAGGGGTGAAATTGATGG+AGG | - | chr7_2:62829313-62829332 | Msa1067880:intron | 50.0% | |
| CGAGATGGCCAAATCAGTGA+AGG | - | chr7_2:62829403-62829422 | Msa1067880:intron | 50.0% | |
| TTGTGGGACCGTGATTTCTG+CGG | - | chr7_2:62829622-62829641 | Msa1067880:exon | 50.0% | |
| GTGAATCCAAACATGCACCC+AGG | - | chr7_2:62829707-62829726 | Msa1067880:five_prime_UTR | 50.0% | |
| CACCCAGGTTATTGCCCTAA+TGG | - | chr7_2:62829722-62829741 | Msa1067880:five_prime_UTR | 50.0% | |
| TGGAGTTCTTCCTTCAGGGC+AGG | + | chr7_2:62828606-62828625 | None:intergenic | 55.0% | |
| ! | TTCCCCGCGTCATCTTTTGC+TGG | + | chr7_2:62828789-62828808 | None:intergenic | 55.0% |
| AAGGTGTAGCAGGGGTCTTG+AGG | + | chr7_2:62828845-62828864 | None:intergenic | 55.0% | |
| CCCCACTTCGGAGGCTAAAT+GGG | + | chr7_2:62828926-62828945 | None:intergenic | 55.0% | |
| CCCATTTAGCCTCCGAAGTG+GGG | - | chr7_2:62828923-62828942 | Msa1067880:intron | 55.0% | |
| ACCCCACTTCGGAGGCTAAA+TGG | + | chr7_2:62828927-62828946 | None:intergenic | 55.0% | |
| CACAATCAACCCCACTTCGG+AGG | + | chr7_2:62828935-62828954 | None:intergenic | 55.0% | |
| ! | GTGTGGACTGTGGCTCAATC+TGG | - | chr7_2:62828962-62828981 | Msa1067880:intron | 55.0% |
| AGACCTAGATGCGCCAACAC+AGG | - | chr7_2:62828986-62829005 | Msa1067880:intron | 55.0% | |
| !! | GTTGGCTTGAGAGCCTGTGT+TGG | + | chr7_2:62829002-62829021 | None:intergenic | 55.0% |
| AGGCTCTCAAGCCAACACAG+AGG | - | chr7_2:62829006-62829025 | Msa1067880:intron | 55.0% | |
| ACTGGCAACATGGCTCTCGT+AGG | + | chr7_2:62829065-62829084 | None:intergenic | 55.0% | |
| AGAGCCATGTTGCCAGTGAG+TGG | - | chr7_2:62829068-62829087 | Msa1067880:intron | 55.0% | |
| CCAAAGCTGGGACCAATGCT+GGG | + | chr7_2:62829127-62829146 | None:intergenic | 55.0% | |
| ACCAAAGCTGGGACCAATGC+TGG | + | chr7_2:62829128-62829147 | None:intergenic | 55.0% | |
| CTCCTGCCAACACCAAAGCT+GGG | + | chr7_2:62829139-62829158 | None:intergenic | 55.0% | |
| TCTCCTGCCAACACCAAAGC+TGG | + | chr7_2:62829140-62829159 | None:intergenic | 55.0% | |
| !! | GCTTTGGTGTTGGCAGGAGA+AGG | - | chr7_2:62829140-62829159 | Msa1067880:intron | 55.0% |
| TGGCAGGAGAAGGAAAGCTC+AGG | - | chr7_2:62829150-62829169 | Msa1067880:intron | 55.0% | |
| CAGGAGAAGGAAAGCTCAGG+TGG | - | chr7_2:62829153-62829172 | Msa1067880:intron | 55.0% | |
| GTATGCGACCACCTAAGCCT+CGG | - | chr7_2:62829218-62829237 | Msa1067880:intron | 55.0% | |
| !! | GCAACCCACTTTTCACACCG+AGG | + | chr7_2:62829238-62829257 | None:intergenic | 55.0% |
| TCTGGCGTCGTAGCTGATTG+CGG | + | chr7_2:62829371-62829390 | None:intergenic | 55.0% | |
| TTCGAAAGCCGCTGATGCCA+TGG | - | chr7_2:62829454-62829473 | Msa1067880:intron | 55.0% | |
| GAGCTTAACCCACTCTGCCA+TGG | + | chr7_2:62829474-62829493 | None:intergenic | 55.0% | |
| !! | TGGCAGAGTGGGTTAAGCTC+TGG | - | chr7_2:62829474-62829493 | Msa1067880:intron | 55.0% |
| GCAGGGTTCAGCGTGTGAAG+AGG | - | chr7_2:62826646-62826665 | Msa1067880:three_prime_UTR | 60.0% | |
| ! | GTGCTCTGTCGTGTGGACTG+TGG | - | chr7_2:62828952-62828971 | Msa1067880:intron | 60.0% |
| ! | GAGCCTGTGTTGGCGCATCT+AGG | + | chr7_2:62828992-62829011 | None:intergenic | 60.0% |
| !! | CCCAGCATTGGTCCCAGCTT+TGG | - | chr7_2:62829124-62829143 | Msa1067880:intron | 60.0% |
| !! | GTCCCAGCTTTGGTGTTGGC+AGG | - | chr7_2:62829134-62829153 | Msa1067880:intron | 60.0% |
| GCAATCAGCTACGACGCCAG+AGG | - | chr7_2:62829370-62829389 | Msa1067880:intron | 60.0% | |
| ATCTCGACCACGCAGTCCTC+TGG | + | chr7_2:62829389-62829408 | None:intergenic | 60.0% | |
| AGAGGACTGCGTGGTCGAGA+TGG | - | chr7_2:62829388-62829407 | Msa1067880:intron | 60.0% | |
| CCACTCTGCCATGGCATCAG+CGG | + | chr7_2:62829465-62829484 | None:intergenic | 60.0% | |
| CGCTGATGCCATGGCAGAGT+GGG | - | chr7_2:62829463-62829482 | Msa1067880:intron | 60.0% | |
| TACGACGCCAGAGGACTGCG+TGG | - | chr7_2:62829379-62829398 | Msa1067880:intron | 65.0% | |
| CCGCTGATGCCATGGCAGAG+TGG | - | chr7_2:62829462-62829481 | Msa1067880:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 62826646 | 62829964 | 62826646 | ID=Msa1067880;Name=Msa1067880 |
| chr7_2 | mRNA | 62826646 | 62829964 | 62826646 | ID=Msa1067880-mRNA-1;Parent=Msa1067880;Name=Msa1067880-mRNA-1;_AED=0.00;_eAED=0.00;_QI=326|1|1|1|1|1|3|1603|87 |
| chr7_2 | exon | 62826646 | 62828268 | 62826646 | ID=Msa1067880-mRNA-1:exon:12817;Parent=Msa1067880-mRNA-1 |
| chr7_2 | exon | 62828361 | 62828490 | 62828361 | ID=Msa1067880-mRNA-1:exon:12816;Parent=Msa1067880-mRNA-1 |
| chr7_2 | exon | 62829525 | 62829964 | 62829525 | ID=Msa1067880-mRNA-1:exon:12815;Parent=Msa1067880-mRNA-1 |
| chr7_2 | five_prime_UTR | 62829639 | 62829964 | 62829639 | ID=Msa1067880-mRNA-1:five_prime_utr;Parent=Msa1067880-mRNA-1 |
| chr7_2 | CDS | 62829525 | 62829638 | 62829525 | ID=Msa1067880-mRNA-1:cds;Parent=Msa1067880-mRNA-1 |
| chr7_2 | CDS | 62828361 | 62828490 | 62828361 | ID=Msa1067880-mRNA-1:cds;Parent=Msa1067880-mRNA-1 |
| chr7_2 | CDS | 62828249 | 62828268 | 62828249 | ID=Msa1067880-mRNA-1:cds;Parent=Msa1067880-mRNA-1 |
| chr7_2 | three_prime_UTR | 62826646 | 62828248 | 62826646 | ID=Msa1067880-mRNA-1:three_prime_utr;Parent=Msa1067880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
