AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1395610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1395610 MtrunA17_Chr7g0249041 97.701 87 2 0 1 87 1 87 2.57e-55 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1395610 AT4G30390.1 65.476 84 29 0 4 87 5 88 3.36e-36 118

Find 172 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTAAATCCTTCGGGAATT+TGG 0.098316 tig0021957:-31542 None:intergenic
AAAATAAAATAGTACTTATT+TGG 0.147564 tig0021957:+32759 Msa1395610:three_prime_UTR
GGTTACGCTTGTAGATATTT+TGG 0.181272 tig0021957:+31630 Msa1395610:three_prime_UTR
ACCCCACTTCGGAGGCTAAA+TGG 0.182922 tig0021957:-31843 None:intergenic
ACACAAAATCAATTAGAATT+AGG 0.213662 tig0021957:-29687 None:intergenic
GCCAACTAATTCTCGGTTAA+AGG 0.225160 tig0021957:-32021 None:intergenic
CGGAGATGTCGGAGAGATTA+AGG 0.252011 tig0021957:-29938 None:intergenic
GACTTCCATTCATTCATAAA+AGG 0.270719 tig0021957:-31462 None:intergenic
CCCAGCATTGGTCCCAGCTT+TGG 0.273271 tig0021957:+32043 Msa1395610:three_prime_UTR
CAATAACCTGGGTGCATGTT+TGG 0.279846 tig0021957:-32632 None:intergenic
TTCTTTCTTCAAGCTGTCTA+TGG 0.288528 tig0021957:-32207 None:intergenic
CATCCTCCATTAGGATTTGT+AGG 0.298893 tig0021957:+32476 Msa1395610:three_prime_UTR
GAATTTGGAGTTCTTCCTTC+AGG 0.313980 tig0021957:-31527 None:intergenic
CTGAGAAGGAGAGAGAAAAT+AGG 0.315789 tig0021957:+29806 Msa1395610:five_prime_UTR
CACAAAATCAATTAGAATTA+GGG 0.327977 tig0021957:-29686 None:intergenic
CACCCAGGTTATTGCCCTAA+TGG 0.329093 tig0021957:+32641 Msa1395610:three_prime_UTR
AAGTTGTTCCTTCACTGATT+TGG 0.332158 tig0021957:-32330 None:intergenic
TACGAAATATATAAGCCATT+AGG 0.335934 tig0021957:-32656 None:intergenic
AATTTGTTGTTTATATAAAC+AGG 0.340916 tig0021957:+29843 Msa1395610:five_prime_UTR
TGTTGTATTGCTTTACCATT+TGG 0.341999 tig0021957:+32802 Msa1395610:three_prime_UTR
AACTCAACAGGCTTAAATTA+AGG 0.343033 tig0021957:+31316 Msa1395610:three_prime_UTR
ACGAAATATATAAGCCATTA+GGG 0.343120 tig0021957:-32655 None:intergenic
AGGCGGCCAATCTAGACTTT+TGG 0.343637 tig0021957:+31336 Msa1395610:three_prime_UTR
AACTCACTGGTAGGAAGAAC+AGG 0.344126 tig0021957:-31153 None:intergenic
GAGTTGTTTCATCCTCCATT+AGG 0.351348 tig0021957:+32467 Msa1395610:three_prime_UTR
AACTAATAGTTGGCATGGTC+TGG 0.355399 tig0021957:+32445 Msa1395610:three_prime_UTR
ACTATTAGTTCACGAGCTTC+AGG 0.358178 tig0021957:-32432 None:intergenic
CAGGATCTTTGACTATTATC+AGG 0.362076 tig0021957:-31503 None:intergenic
CTGAAACTGTTTATAGCAAC+TGG 0.365834 tig0021957:+31075 Msa1395610:CDS
ACCAAAGCTGGGACCAATGC+TGG 0.375478 tig0021957:-32044 None:intergenic
TCCACTTCTATTCGCTTCTC+TGG 0.381049 tig0021957:+31609 Msa1395610:three_prime_UTR
GACTATTATCAGGTGGAAAC+GGG 0.402580 tig0021957:-31493 None:intergenic
ATGGGAAGGGGTGAAATTGA+TGG 0.404928 tig0021957:+32229 Msa1395610:three_prime_UTR
CCCCACTTCGGAGGCTAAAT+GGG 0.405485 tig0021957:-31842 None:intergenic
GTCCCAGCTTTGGTGTTGGC+AGG 0.407640 tig0021957:+32053 Msa1395610:three_prime_UTR
ATCTCGACCACGCAGTCCTC+TGG 0.407680 tig0021957:-32305 None:intergenic
GACATCTGCACTAAATCCTT+CGG 0.408413 tig0021957:-31550 None:intergenic
TCTCCTGCCAACACCAAAGC+TGG 0.408713 tig0021957:-32056 None:intergenic
CACAAACCAAAAGTCTAGAT+TGG 0.413516 tig0021957:-31342 None:intergenic
ACGTTTGACTCCAACTCAAC+AGG 0.414739 tig0021957:+31304 Msa1395610:three_prime_UTR
GTTTAGATTGGTGATGTGTT+AGG 0.416435 tig0021957:+32510 Msa1395610:three_prime_UTR
GTGTGGACTGTGGCTCAATC+TGG 0.418802 tig0021957:+31881 Msa1395610:three_prime_UTR
CATTCTTCTAGATCTCTTCC+TGG 0.422448 tig0021957:+29983 Msa1395610:CDS
AGATCTAGAAGAATGTGATC+AGG 0.429631 tig0021957:-29975 None:intergenic
CTCACTCCTACAAATCCTAA+TGG 0.431086 tig0021957:-32482 None:intergenic
ACATCTGCACTAAATCCTTC+GGG 0.431937 tig0021957:-31549 None:intergenic
TGACTATTATCAGGTGGAAA+CGG 0.435701 tig0021957:-31494 None:intergenic
TTAAAGAAGAAAGGTGTAGC+AGG 0.438138 tig0021957:-31771 None:intergenic
TCAGATTATTAAAGAATTCG+TGG 0.449660 tig0021957:-29787 None:intergenic
AAAGTGGGTTGCCGTATGTT+TGG 0.450892 tig0021957:+32165 Msa1395610:three_prime_UTR
ACCCATTTAGCCTCCGAAGT+GGG 0.451793 tig0021957:+31841 Msa1395610:three_prime_UTR
GCCTTTAACCGAGAATTAGT+TGG 0.454901 tig0021957:+32020 Msa1395610:three_prime_UTR
GGGAAACTGTGGAAGATATA+TGG 0.454942 tig0021957:+32093 Msa1395610:three_prime_UTR
AAGCCATTAGGGCAATAACC+TGG 0.466614 tig0021957:-32644 None:intergenic
TAGACAGCTTGAAGAAAGAA+TGG 0.467447 tig0021957:+32210 Msa1395610:three_prime_UTR
CGCTGATGCCATGGCAGAGT+GGG 0.477662 tig0021957:+32382 Msa1395610:three_prime_UTR
AATTTGGAGTTCTTCCTTCA+GGG 0.480278 tig0021957:-31526 None:intergenic
TTAATTTAAGCCTGTTGAGT+TGG 0.483064 tig0021957:-31314 None:intergenic
TATCTTGAATTCCTCTGTGT+TGG 0.484553 tig0021957:-31936 None:intergenic
GAACAAAATCTGCACCCTTA+CGG 0.484567 tig0021957:-31812 None:intergenic
GAGTGAGTGCATGTTTAGAT+TGG 0.485799 tig0021957:+32498 Msa1395610:three_prime_UTR
ATTAAGGACGGCTGAGTCAA+TGG 0.488201 tig0021957:-29922 None:intergenic
ATGCTGGGCCAACTAATTCT+CGG 0.493427 tig0021957:-32028 None:intergenic
CTTTCATTTCTCCAAACATA+CGG 0.497867 tig0021957:-32176 None:intergenic
GAGCCTGTGTTGGCGCATCT+AGG 0.503951 tig0021957:-31908 None:intergenic
ATCAGGGATGAGAGAGAGAT+CGG 0.511014 tig0021957:-29958 None:intergenic
TATAGTGTATTAAAGAAGAA+AGG 0.512361 tig0021957:-31780 None:intergenic
GCGTGACTGAGTTAGATTGA+AGG 0.512473 tig0021957:+32734 Msa1395610:three_prime_UTR
GGAAAGAACACAGAGATTGA+TGG 0.516782 tig0021957:+29752 Msa1395610:five_prime_UTR
TGGCAGAGTGGGTTAAGCTC+TGG 0.517333 tig0021957:+32393 Msa1395610:three_prime_UTR
TGGAGTTCTTCCTTCAGGGC+AGG 0.518206 tig0021957:-31522 None:intergenic
TTCGAAAGCCGCTGATGCCA+TGG 0.519664 tig0021957:+32373 Msa1395610:three_prime_UTR
AGAATTAGTTGGCCCAGCAT+TGG 0.520079 tig0021957:+32031 Msa1395610:three_prime_UTR
ATTGGTCCCAGCTTTGGTGT+TGG 0.521152 tig0021957:+32049 Msa1395610:three_prime_UTR
GCTTTGGTGTTGGCAGGAGA+AGG 0.521241 tig0021957:+32059 Msa1395610:three_prime_UTR
AAATCAGTGAAGGAACAACT+TGG 0.521373 tig0021957:+32332 Msa1395610:three_prime_UTR
AACTTTACAGACTGAAAGAA+AGG 0.521592 tig0021957:-32263 None:intergenic
CTAAGCCTCGGTGTGAAAAG+TGG 0.526128 tig0021957:+32149 Msa1395610:three_prime_UTR
GAAGCTCGTGAACTAATAGT+TGG 0.527744 tig0021957:+32435 Msa1395610:three_prime_UTR
GAGAGAGAGATCGGAGATGT+CGG 0.529629 tig0021957:-29949 None:intergenic
GGTATTTGAATAAAATTCCA+AGG 0.532112 tig0021957:+32823 Msa1395610:three_prime_UTR
AGACAGCTTGAAGAAAGAAT+GGG 0.532129 tig0021957:+32211 Msa1395610:three_prime_UTR
CCAAAGCTGGGACCAATGCT+GGG 0.532879 tig0021957:-32043 None:intergenic
GTGCAGAGAATATTGAAAGC+TGG 0.536542 tig0021957:+31033 Msa1395610:intron
GTTTATAGCAACTGGTAATG+AGG 0.537844 tig0021957:+31083 Msa1395610:CDS
CTCTGAAATTGAGCGAGTGG+TGG 0.538006 tig0021957:+31581 Msa1395610:three_prime_UTR
AATTTGAAAAGAAGAAATAG+AGG 0.541103 tig0021957:+29727 Msa1395610:five_prime_UTR
AGTCAAAGATCCTGCCCTGA+AGG 0.547063 tig0021957:+31512 Msa1395610:three_prime_UTR
ACTATATGATCCATTCCGTA+AGG 0.553697 tig0021957:+31797 Msa1395610:three_prime_UTR
CAGGAGAAGGAAAGCTCAGG+TGG 0.555962 tig0021957:+32072 Msa1395610:three_prime_UTR
CTCCTGCCAACACCAAAGCT+GGG 0.557867 tig0021957:-32055 None:intergenic
GATTCCACTCACTGGCAACA+TGG 0.560139 tig0021957:-31991 None:intergenic
CCCATTTAGCCTCCGAAGTG+GGG 0.561643 tig0021957:+31842 Msa1395610:three_prime_UTR
ACCAGAGAAGCGAATAGAAG+TGG 0.561782 tig0021957:-31610 None:intergenic
GTTGGCTTGAGAGCCTGTGT+TGG 0.565124 tig0021957:-31918 None:intergenic
CAAGGTCTTGCTAATGCTGA+TGG 0.566230 tig0021957:+32841 Msa1395610:three_prime_UTR
CATCAGCATTAGCAAGACCT+TGG 0.568457 tig0021957:-32840 None:intergenic
AGAGGACTGCGTGGTCGAGA+TGG 0.569270 tig0021957:+32307 Msa1395610:three_prime_UTR
AAATCTGCACCCTTACGGAA+TGG 0.569993 tig0021957:-31807 None:intergenic
TAAAGCTTCCGCAGAAATCA+CGG 0.572456 tig0021957:-32549 None:intergenic
TCTGAAATTGAGCGAGTGGT+GGG 0.574447 tig0021957:+31582 Msa1395610:three_prime_UTR
GTGTTAGGCAAAATCATTGT+GGG 0.575816 tig0021957:+32525 Msa1395610:three_prime_UTR
GTTGATTGTGCTCTGTCGTG+TGG 0.577748 tig0021957:+31864 Msa1395610:three_prime_UTR
AGACCTAGATGCGCCAACAC+AGG 0.578067 tig0021957:+31905 Msa1395610:three_prime_UTR
GTTAAGCTCTGGAAGTCAGT+TGG 0.579934 tig0021957:+32404 Msa1395610:three_prime_UTR
GATCTAGAAGAATGTGATCA+GGG 0.580760 tig0021957:-29974 None:intergenic
TCGTGAACTAATAGTTGGCA+TGG 0.583069 tig0021957:+32440 Msa1395610:three_prime_UTR
GCAATGTTGATTCCACTCAC+TGG 0.584544 tig0021957:-31999 None:intergenic
TGGCAGGAGAAGGAAAGCTC+AGG 0.584833 tig0021957:+32069 Msa1395610:three_prime_UTR
TGAAAAGAAGAAATAGAGGA+CGG 0.585737 tig0021957:+29731 Msa1395610:five_prime_UTR
AGAGCCATGTTGCCAGTGAG+TGG 0.586101 tig0021957:+31987 Msa1395610:three_prime_UTR
ATGGTGAGAGAAAGTAATGA+TGG 0.588762 tig0021957:-29903 None:intergenic
ATTATTAAAGAATTCGTGGA+GGG 0.591719 tig0021957:-29783 None:intergenic
AATTCTTTAATAATCTGAGA+AGG 0.593117 tig0021957:+29792 Msa1395610:five_prime_UTR
GCTTGAAGAAAGAATGGGAA+GGG 0.593851 tig0021957:+32216 Msa1395610:three_prime_UTR
GAGCTTAACCCACTCTGCCA+TGG 0.594397 tig0021957:-32390 None:intergenic
TAAGCCTCGGTGTGAAAAGT+GGG 0.598697 tig0021957:+32150 Msa1395610:three_prime_UTR
TAAAGAAGAAAGGTGTAGCA+GGG 0.600590 tig0021957:-31770 None:intergenic
CTATATGATCCATTCCGTAA+GGG 0.604465 tig0021957:+31798 Msa1395610:three_prime_UTR
GCAGGGTTCAGCGTGTGAAG+AGG 0.606108 tig0021957:+29565 Msa1395610:five_prime_UTR
CCACTCTGCCATGGCATCAG+CGG 0.607023 tig0021957:-32381 None:intergenic
GTGCTCTGTCGTGTGGACTG+TGG 0.608262 tig0021957:+31871 Msa1395610:three_prime_UTR
TATGTTTGGAGAAATGAAAG+AGG 0.608956 tig0021957:+32179 Msa1395610:three_prime_UTR
AAAGCTCAGGTGGGAAACTG+TGG 0.612768 tig0021957:+32082 Msa1395610:three_prime_UTR
CGAGATGGCCAAATCAGTGA+AGG 0.615435 tig0021957:+32322 Msa1395610:three_prime_UTR
AACGAAGTTGACATTGTGAT+CGG 0.616081 tig0021957:+31417 Msa1395610:three_prime_UTR
GATCTTTGACTATTATCAGG+TGG 0.616826 tig0021957:-31500 None:intergenic
GTATGCGACCACCTAAGCCT+CGG 0.617533 tig0021957:+32137 Msa1395610:three_prime_UTR
CCGCTGATGCCATGGCAGAG+TGG 0.618375 tig0021957:+32381 Msa1395610:three_prime_UTR
TTGTGGGACCGTGATTTCTG+CGG 0.619208 tig0021957:+32541 Msa1395610:three_prime_UTR
AAGGTGTAGCAGGGGTCTTG+AGG 0.619352 tig0021957:-31761 None:intergenic
AGTGAAGGAACAACTTGGGA+AGG 0.619719 tig0021957:+32337 Msa1395610:three_prime_UTR
TACCCATTTAGCCTCCGAAG+TGG 0.620536 tig0021957:+31840 Msa1395610:three_prime_UTR
AGAGAAGCGAATAGAAGTGG+AGG 0.622245 tig0021957:-31607 None:intergenic
CAACATGGCTCTCGTAGGAA+CGG 0.623643 tig0021957:-31976 None:intergenic
AATCAGTGAAGGAACAACTT+GGG 0.624801 tig0021957:+32333 Msa1395610:three_prime_UTR
ATTCATTCATAAAAGGAGTG+AGG 0.628201 tig0021957:-31455 None:intergenic
GGAAGGGGTGAAATTGATGG+AGG 0.629194 tig0021957:+32232 Msa1395610:three_prime_UTR
AAACTCTGAAATTGAGCGAG+TGG 0.630141 tig0021957:+31578 Msa1395610:three_prime_UTR
AGCCATTAGGGCAATAACCT+GGG 0.630899 tig0021957:-32643 None:intergenic
GAACAGGGGTCACAATATGT+CGG 0.636120 tig0021957:-31137 None:intergenic
GAGCACAATCAACCCCACTT+CGG 0.641756 tig0021957:-31854 None:intergenic
CACAATCAACCCCACTTCGG+AGG 0.642239 tig0021957:-31851 None:intergenic
CTTGAAGAAAGAATGGGAAG+GGG 0.643591 tig0021957:+32217 Msa1395610:three_prime_UTR
ACTGGCAACATGGCTCTCGT+AGG 0.644873 tig0021957:-31981 None:intergenic
AAAGAAGAAAGGTGTAGCAG+GGG 0.647705 tig0021957:-31769 None:intergenic
GTTCCAGCAAAAGATGACGC+GGG 0.649072 tig0021957:+31702 Msa1395610:three_prime_UTR
AAAATCAATTAGAATTAGGG+AGG 0.650213 tig0021957:-29683 None:intergenic
TCTGGCGTCGTAGCTGATTG+CGG 0.652191 tig0021957:-32287 None:intergenic
ATTACTTGAGACATCTTGTG+AGG 0.652560 tig0021957:-31384 None:intergenic
AGCTTGAAGAAAGAATGGGA+AGG 0.654031 tig0021957:+32215 Msa1395610:three_prime_UTR
TCAGCGGCTTTCGAAAACAT+AGG 0.655253 tig0021957:-32365 None:intergenic
GCAATCAGCTACGACGCCAG+AGG 0.657417 tig0021957:+32289 Msa1395610:three_prime_UTR
GGGGAATGTAGTAGATGCTG+TGG 0.657954 tig0021957:+31722 Msa1395610:three_prime_UTR
TTCCAGCAAAAGATGACGCG+GGG 0.659790 tig0021957:+31703 Msa1395610:three_prime_UTR
TGTTCCAGCAAAAGATGACG+CGG 0.661904 tig0021957:+31701 Msa1395610:three_prime_UTR
GAGTTTGAGAGAATCACAGT+GGG 0.666636 tig0021957:-32600 None:intergenic
ACTCCTACAAATCCTAATGG+AGG 0.670063 tig0021957:-32479 None:intergenic
TCAACAGGCTTAAATTAAGG+CGG 0.673941 tig0021957:+31319 Msa1395610:three_prime_UTR
GATGTCGGAGAGATTAAGGA+CGG 0.674146 tig0021957:-29934 None:intergenic
GAAGAACTCCAAATTCCCGA+AGG 0.676927 tig0021957:+31534 Msa1395610:three_prime_UTR
GTGAATCCAAACATGCACCC+AGG 0.681674 tig0021957:+32626 Msa1395610:three_prime_UTR
AGGAGAAGGAAAGCTCAGGT+GGG 0.684548 tig0021957:+32073 Msa1395610:three_prime_UTR
ACTGTGGAAGATATATGGTG+TGG 0.687243 tig0021957:+32098 Msa1395610:three_prime_UTR
GATTATTAAAGAATTCGTGG+AGG 0.687349 tig0021957:-29784 None:intergenic
ACAGAGGAATTCAAGATACG+TGG 0.688219 tig0021957:+31941 Msa1395610:three_prime_UTR
ACTCACTGGTAGGAAGAACA+GGG 0.694442 tig0021957:-31152 None:intergenic
TGTGTTAGGCAAAATCATTG+TGG 0.720022 tig0021957:+32524 Msa1395610:three_prime_UTR
GTGAGAGAAAGTAATGATGG+CGG 0.736980 tig0021957:-29900 None:intergenic
TGAGTTTGAGAGAATCACAG+TGG 0.743087 tig0021957:-32601 None:intergenic
CTCACTGGTAGGAAGAACAG+GGG 0.761648 tig0021957:-31151 None:intergenic
AGGCTCTCAAGCCAACACAG+AGG 0.778427 tig0021957:+31925 Msa1395610:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTTATGATTATATAATA+TGG - tig0021957:30192-30211 None:intergenic 10.0%
!!! AAAATTTTATCATGTATTTA+TGG + tig0021957:31181-31200 Msa1395610:intron 10.0%
!! ATATTTGTAAATTATTATAC+AGG + tig0021957:31239-31258 Msa1395610:intron 10.0%
!! AAAATAAAATAGTACTTATT+TGG + tig0021957:32759-32778 Msa1395610:three_prime_UTR 10.0%
!!! AATTTGTTGTTTATATAAAC+AGG + tig0021957:29843-29862 Msa1395610:five_prime_UTR 15.0%
!! AATAAAGAAAAATTGAGAAA+GGG - tig0021957:30080-30099 None:intergenic 15.0%
!! AAATAAAGAAAAATTGAGAA+AGG - tig0021957:30081-30100 None:intergenic 15.0%
!! ATCAACAAAAAAAAACAAAA+GGG - tig0021957:30122-30141 None:intergenic 15.0%
!! TATCAACAAAAAAAAACAAA+AGG - tig0021957:30123-30142 None:intergenic 15.0%
!! ATGATTATATAATATGGATA+AGG - tig0021957:30186-30205 None:intergenic 15.0%
!!! ATACTCATTTATCTTTTTTA+TGG + tig0021957:30638-30657 Msa1395610:intron 15.0%
!!! TACTCATTTATCTTTTTTAT+GGG + tig0021957:30639-30658 Msa1395610:intron 15.0%
!!! AAAATTTTAAAATAACTCAC+TGG - tig0021957:31169-31188 None:intergenic 15.0%
!!! AATTTTATTCAAATACCAAA+TGG - tig0021957:32820-32839 None:intergenic 15.0%
!!! AAAGTGGAACAAAATTTTAT+CGG + tig0021957:29590-29609 Msa1395610:five_prime_UTR 20.0%
!! CACAAAATCAATTAGAATTA+GGG - tig0021957:29689-29708 None:intergenic 20.0%
!! ACACAAAATCAATTAGAATT+AGG - tig0021957:29690-29709 None:intergenic 20.0%
!! AATTTGAAAAGAAGAAATAG+AGG + tig0021957:29727-29746 Msa1395610:five_prime_UTR 20.0%
!! AATTCTTTAATAATCTGAGA+AGG + tig0021957:29792-29811 Msa1395610:five_prime_UTR 20.0%
!!! TCATTTTCTCAAATTATTAC+TGG - tig0021957:30370-30389 None:intergenic 20.0%
!!! ACTCATTTATCTTTTTTATG+GGG + tig0021957:30640-30659 Msa1395610:intron 20.0%
!! ACTTAATTATAGACAACAAA+AGG - tig0021957:30931-30950 None:intergenic 20.0%
!! TATAGTGTATTAAAGAAGAA+AGG - tig0021957:31783-31802 None:intergenic 20.0%
! AAAATCAATTAGAATTAGGG+AGG - tig0021957:29686-29705 None:intergenic 25.0%
!!! ATTGATTTTGTGTTGACAAA+TGG + tig0021957:29697-29716 Msa1395610:five_prime_UTR 25.0%
! ATTATTAAAGAATTCGTGGA+GGG - tig0021957:29786-29805 None:intergenic 25.0%
! TCAGATTATTAAAGAATTCG+TGG - tig0021957:29790-29809 None:intergenic 25.0%
!! TAATGTTGTTTGCTTCTTTA+GGG + tig0021957:30214-30233 Msa1395610:intron 25.0%
! TTACAATTACTCTTGTAGTA+TGG + tig0021957:30248-30267 Msa1395610:intron 25.0%
! TTGTCTTTAGATGAATTTGT+TGG + tig0021957:30302-30321 Msa1395610:intron 25.0%
!! TTAATATTTGATAGCCCAAT+AGG - tig0021957:30746-30765 None:intergenic 25.0%
! CTTACTAATTTGATCAGATA+AGG - tig0021957:30814-30833 None:intergenic 25.0%
! CTTATCTGATCAAATTAGTA+AGG + tig0021957:30812-30831 Msa1395610:intron 25.0%
!!! CAGGATTTTGATTCATAATT+TGG + tig0021957:30876-30895 Msa1395610:intron 25.0%
! GATTTGATATATTGTAGATC+TGG + tig0021957:30898-30917 Msa1395610:intron 25.0%
!! TATGCTAAAGTTTCTTCTTT+TGG + tig0021957:30967-30986 Msa1395610:intron 25.0%
!!! TTTTAAAATAACTCACTGGT+AGG - tig0021957:31165-31184 None:intergenic 25.0%
! ACGAAATATATAAGCCATTA+GGG - tig0021957:32658-32677 None:intergenic 25.0%
! TACGAAATATATAAGCCATT+AGG - tig0021957:32659-32678 None:intergenic 25.0%
! GGTATTTGAATAAAATTCCA+AGG + tig0021957:32823-32842 Msa1395610:three_prime_UTR 25.0%
TGAAAAGAAGAAATAGAGGA+CGG + tig0021957:29731-29750 Msa1395610:five_prime_UTR 30.0%
GATTATTAAAGAATTCGTGG+AGG - tig0021957:29787-29806 None:intergenic 30.0%
GAGAGAATAAAAAGAATACC+AGG - tig0021957:30004-30023 None:intergenic 30.0%
GTAGTTACTACTAGCTAATA+AGG + tig0021957:30051-30070 Msa1395610:intron 30.0%
TATAATATGGATAAGGTCAC+AGG - tig0021957:30179-30198 None:intergenic 30.0%
! GTAATGTTGTTTGCTTCTTT+AGG + tig0021957:30213-30232 Msa1395610:intron 30.0%
AGATTGTAGTTGGATCATTT+AGG + tig0021957:30561-30580 Msa1395610:intron 30.0%
!! GTGCCATCATTTTCTTATTT+GGG + tig0021957:30682-30701 Msa1395610:intron 30.0%
!! CATCATTTTCTTATTTGGGA+GGG + tig0021957:30686-30705 Msa1395610:intron 30.0%
TATGAATCAAAATCCTGACA+AGG - tig0021957:30873-30892 None:intergenic 30.0%
GAAAATTAAGAAATGCGATG+AGG - tig0021957:31010-31029 None:intergenic 30.0%
TTAATTTAAGCCTGTTGAGT+TGG - tig0021957:31317-31336 None:intergenic 30.0%
AACTCAACAGGCTTAAATTA+AGG + tig0021957:31316-31335 Msa1395610:three_prime_UTR 30.0%
ATTCATTCATAAAAGGAGTG+AGG - tig0021957:31458-31477 None:intergenic 30.0%
! TCACTCCTTTTATGAATGAA+TGG + tig0021957:31457-31476 Msa1395610:three_prime_UTR 30.0%
GACTTCCATTCATTCATAAA+AGG - tig0021957:31465-31484 None:intergenic 30.0%
CTTTCATTTCTCCAAACATA+CGG - tig0021957:32179-32198 None:intergenic 30.0%
TATGTTTGGAGAAATGAAAG+AGG + tig0021957:32179-32198 Msa1395610:three_prime_UTR 30.0%
AACTTTACAGACTGAAAGAA+AGG - tig0021957:32266-32285 None:intergenic 30.0%
TGTTGTATTGCTTTACCATT+TGG + tig0021957:32802-32821 Msa1395610:three_prime_UTR 30.0%
ATGGTGAGAGAAAGTAATGA+TGG - tig0021957:29906-29925 None:intergenic 35.0%
GATCTAGAAGAATGTGATCA+GGG - tig0021957:29977-29996 None:intergenic 35.0%
AGATCTAGAAGAATGTGATC+AGG - tig0021957:29978-29997 None:intergenic 35.0%
GTGAAAGTTGTTGTCAAATG+TGG + tig0021957:30481-30500 Msa1395610:intron 35.0%
CACAATGTGCATGCAATTAA+GGG - tig0021957:30515-30534 None:intergenic 35.0%
ATCTGAGAACAACTAAGACT+TGG + tig0021957:30595-30614 Msa1395610:intron 35.0%
TCTGAGAACAACTAAGACTT+GGG + tig0021957:30596-30615 Msa1395610:intron 35.0%
! GGGTTGAATTGATAGTTATG+TGG + tig0021957:30660-30679 Msa1395610:intron 35.0%
!! GGTGCCATCATTTTCTTATT+TGG + tig0021957:30681-30700 Msa1395610:intron 35.0%
CCTCCCAAATAAGAAAATGA+TGG - tig0021957:30688-30707 None:intergenic 35.0%
!! CCATCATTTTCTTATTTGGG+AGG + tig0021957:30685-30704 Msa1395610:intron 35.0%
! TACCTTGTGCTTTTCCTATT+GGG + tig0021957:30729-30748 Msa1395610:intron 35.0%
! TTTTCAGCAGCCATAGAATT+TGG + tig0021957:30847-30866 Msa1395610:intron 35.0%
AATTAAGAAATGCGATGAGG+AGG - tig0021957:31007-31026 None:intergenic 35.0%
CTTTCAATATTCTCTGCACA+TGG - tig0021957:31032-31051 None:intergenic 35.0%
CTGAAACTGTTTATAGCAAC+TGG + tig0021957:31075-31094 Msa1395610:CDS 35.0%
! GTTTATAGCAACTGGTAATG+AGG + tig0021957:31083-31102 Msa1395610:CDS 35.0%
TCAACAGGCTTAAATTAAGG+CGG + tig0021957:31319-31338 Msa1395610:three_prime_UTR 35.0%
CACAAACCAAAAGTCTAGAT+TGG - tig0021957:31345-31364 None:intergenic 35.0%
ATTACTTGAGACATCTTGTG+AGG - tig0021957:31387-31406 None:intergenic 35.0%
AACGAAGTTGACATTGTGAT+CGG + tig0021957:31417-31436 Msa1395610:three_prime_UTR 35.0%
TGACTATTATCAGGTGGAAA+CGG - tig0021957:31497-31516 None:intergenic 35.0%
GATCTTTGACTATTATCAGG+TGG - tig0021957:31503-31522 None:intergenic 35.0%
CAGGATCTTTGACTATTATC+AGG - tig0021957:31506-31525 None:intergenic 35.0%
! AATTTGGAGTTCTTCCTTCA+GGG - tig0021957:31529-31548 None:intergenic 35.0%
! GGTTACGCTTGTAGATATTT+TGG + tig0021957:31630-31649 Msa1395610:three_prime_UTR 35.0%
! TAAAGAAGAAAGGTGTAGCA+GGG - tig0021957:31773-31792 None:intergenic 35.0%
! TTAAAGAAGAAAGGTGTAGC+AGG - tig0021957:31774-31793 None:intergenic 35.0%
ACTATATGATCCATTCCGTA+AGG + tig0021957:31797-31816 Msa1395610:three_prime_UTR 35.0%
CTATATGATCCATTCCGTAA+GGG + tig0021957:31798-31817 Msa1395610:three_prime_UTR 35.0%
TATCTTGAATTCCTCTGTGT+TGG - tig0021957:31939-31958 None:intergenic 35.0%
TTCTTTCTTCAAGCTGTCTA+TGG - tig0021957:32210-32229 None:intergenic 35.0%
TAGACAGCTTGAAGAAAGAA+TGG + tig0021957:32210-32229 Msa1395610:three_prime_UTR 35.0%
AGACAGCTTGAAGAAAGAAT+GGG + tig0021957:32211-32230 Msa1395610:three_prime_UTR 35.0%
! AAGTTGTTCCTTCACTGATT+TGG - tig0021957:32333-32352 None:intergenic 35.0%
AAATCAGTGAAGGAACAACT+TGG + tig0021957:32332-32351 Msa1395610:three_prime_UTR 35.0%
AATCAGTGAAGGAACAACTT+GGG + tig0021957:32333-32352 Msa1395610:three_prime_UTR 35.0%
!! GTTTAGATTGGTGATGTGTT+AGG + tig0021957:32510-32529 Msa1395610:three_prime_UTR 35.0%
TGTGTTAGGCAAAATCATTG+TGG + tig0021957:32524-32543 Msa1395610:three_prime_UTR 35.0%
GTGTTAGGCAAAATCATTGT+GGG + tig0021957:32525-32544 Msa1395610:three_prime_UTR 35.0%
GGAAAGAACACAGAGATTGA+TGG + tig0021957:29752-29771 Msa1395610:five_prime_UTR 40.0%
CTGAGAAGGAGAGAGAAAAT+AGG + tig0021957:29806-29825 Msa1395610:five_prime_UTR 40.0%
GTGAGAGAAAGTAATGATGG+CGG - tig0021957:29903-29922 None:intergenic 40.0%
CATTCTTCTAGATCTCTTCC+TGG + tig0021957:29983-30002 Msa1395610:CDS 40.0%
AAGTTTGAGAGAGAGAGAGA+GGG - tig0021957:30026-30045 None:intergenic 40.0%
!! GTTGACACACCTTTGATTTG+AGG + tig0021957:30413-30432 Msa1395610:intron 40.0%
GCACTAACACCTCAAATCAA+AGG - tig0021957:30425-30444 None:intergenic 40.0%
! ATTTGAGGTGTTAGTGCTAG+AGG + tig0021957:30428-30447 Msa1395610:intron 40.0%
CCACAATGTGCATGCAATTA+AGG - tig0021957:30516-30535 None:intergenic 40.0%
CCTTAATTGCATGCACATTG+TGG + tig0021957:30513-30532 Msa1395610:intron 40.0%
GTTGCAGTCTAGATTGTAGT+TGG + tig0021957:30551-30570 Msa1395610:intron 40.0%
! GTACCTTGTGCTTTTCCTAT+TGG + tig0021957:30728-30747 Msa1395610:intron 40.0%
TCAAATGTTCACAGCAACAG+GGG - tig0021957:30791-30810 None:intergenic 40.0%
GTCAAATGTTCACAGCAACA+GGG - tig0021957:30792-30811 None:intergenic 40.0%
GCTGCTGAAAAATTGTCAAC+AGG - tig0021957:30838-30857 None:intergenic 40.0%
GTGCAGAGAATATTGAAAGC+TGG + tig0021957:31033-31052 Msa1395610:intron 40.0%
GACTATTATCAGGTGGAAAC+GGG - tig0021957:31496-31515 None:intergenic 40.0%
! GAATTTGGAGTTCTTCCTTC+AGG - tig0021957:31530-31549 None:intergenic 40.0%
CACTAAATCCTTCGGGAATT+TGG - tig0021957:31545-31564 None:intergenic 40.0%
ACATCTGCACTAAATCCTTC+GGG - tig0021957:31552-31571 None:intergenic 40.0%
GACATCTGCACTAAATCCTT+CGG - tig0021957:31553-31572 None:intergenic 40.0%
!! AAACTCTGAAATTGAGCGAG+TGG + tig0021957:31578-31597 Msa1395610:three_prime_UTR 40.0%
! AAAGAAGAAAGGTGTAGCAG+GGG - tig0021957:31772-31791 None:intergenic 40.0%
GAACAAAATCTGCACCCTTA+CGG - tig0021957:31815-31834 None:intergenic 40.0%
ACAGAGGAATTCAAGATACG+TGG + tig0021957:31941-31960 Msa1395610:three_prime_UTR 40.0%
GCCTTTAACCGAGAATTAGT+TGG + tig0021957:32020-32039 Msa1395610:three_prime_UTR 40.0%
GCCAACTAATTCTCGGTTAA+AGG - tig0021957:32024-32043 None:intergenic 40.0%
GGGAAACTGTGGAAGATATA+TGG + tig0021957:32093-32112 Msa1395610:three_prime_UTR 40.0%
ACTGTGGAAGATATATGGTG+TGG + tig0021957:32098-32117 Msa1395610:three_prime_UTR 40.0%
AGCTTGAAGAAAGAATGGGA+AGG + tig0021957:32215-32234 Msa1395610:three_prime_UTR 40.0%
GCTTGAAGAAAGAATGGGAA+GGG + tig0021957:32216-32235 Msa1395610:three_prime_UTR 40.0%
CTTGAAGAAAGAATGGGAAG+GGG + tig0021957:32217-32236 Msa1395610:three_prime_UTR 40.0%
ACTATTAGTTCACGAGCTTC+AGG - tig0021957:32435-32454 None:intergenic 40.0%
GAAGCTCGTGAACTAATAGT+TGG + tig0021957:32435-32454 Msa1395610:three_prime_UTR 40.0%
TCGTGAACTAATAGTTGGCA+TGG + tig0021957:32440-32459 Msa1395610:three_prime_UTR 40.0%
AACTAATAGTTGGCATGGTC+TGG + tig0021957:32445-32464 Msa1395610:three_prime_UTR 40.0%
! GAGTTGTTTCATCCTCCATT+AGG + tig0021957:32467-32486 Msa1395610:three_prime_UTR 40.0%
CATCCTCCATTAGGATTTGT+AGG + tig0021957:32476-32495 Msa1395610:three_prime_UTR 40.0%
ACTCCTACAAATCCTAATGG+AGG - tig0021957:32482-32501 None:intergenic 40.0%
CTCACTCCTACAAATCCTAA+TGG - tig0021957:32485-32504 None:intergenic 40.0%
GAGTGAGTGCATGTTTAGAT+TGG + tig0021957:32498-32517 Msa1395610:three_prime_UTR 40.0%
TAAAGCTTCCGCAGAAATCA+CGG - tig0021957:32552-32571 None:intergenic 40.0%
GAGTTTGAGAGAATCACAGT+GGG - tig0021957:32603-32622 None:intergenic 40.0%
TGAGTTTGAGAGAATCACAG+TGG - tig0021957:32604-32623 None:intergenic 40.0%
AGCGTGTGAAGAGGAAAAAG+TGG + tig0021957:29574-29593 Msa1395610:five_prime_UTR 45.0%
ATTAAGGACGGCTGAGTCAA+TGG - tig0021957:29925-29944 None:intergenic 45.0%
GATGTCGGAGAGATTAAGGA+CGG - tig0021957:29937-29956 None:intergenic 45.0%
ATCAGGGATGAGAGAGAGAT+CGG - tig0021957:29961-29980 None:intergenic 45.0%
GAAGTTTGAGAGAGAGAGAG+AGG - tig0021957:30027-30046 None:intergenic 45.0%
AGTGCTAGAGGTTGTGTACA+AGG + tig0021957:30440-30459 Msa1395610:intron 45.0%
! AGCCCAATAGGAAAAGCACA+AGG - tig0021957:30734-30753 None:intergenic 45.0%
GGTCAAATGTTCACAGCAAC+AGG - tig0021957:30793-30812 None:intergenic 45.0%
CCTGACAAGGCCAAATTCTA+TGG - tig0021957:30860-30879 None:intergenic 45.0%
!! CCATAGAATTTGGCCTTGTC+AGG + tig0021957:30857-30876 Msa1395610:intron 45.0%
GAACAGGGGTCACAATATGT+CGG - tig0021957:31140-31159 None:intergenic 45.0%
ACTCACTGGTAGGAAGAACA+GGG - tig0021957:31155-31174 None:intergenic 45.0%
AACTCACTGGTAGGAAGAAC+AGG - tig0021957:31156-31175 None:intergenic 45.0%
ACGTTTGACTCCAACTCAAC+AGG + tig0021957:31304-31323 Msa1395610:three_prime_UTR 45.0%
GAAGAACTCCAAATTCCCGA+AGG + tig0021957:31534-31553 Msa1395610:three_prime_UTR 45.0%
! TCTGAAATTGAGCGAGTGGT+GGG + tig0021957:31582-31601 Msa1395610:three_prime_UTR 45.0%
AGAGAAGCGAATAGAAGTGG+AGG - tig0021957:31610-31629 None:intergenic 45.0%
TCCACTTCTATTCGCTTCTC+TGG + tig0021957:31609-31628 Msa1395610:three_prime_UTR 45.0%
ACCAGAGAAGCGAATAGAAG+TGG - tig0021957:31613-31632 None:intergenic 45.0%
TGTTCCAGCAAAAGATGACG+CGG + tig0021957:31701-31720 Msa1395610:three_prime_UTR 45.0%
AAATCTGCACCCTTACGGAA+TGG - tig0021957:31810-31829 None:intergenic 45.0%
!! AAGGGTGCAGATTTTGTTCG+CGG + tig0021957:31816-31835 Msa1395610:three_prime_UTR 45.0%
!! GCAATGTTGATTCCACTCAC+TGG - tig0021957:32002-32021 None:intergenic 45.0%
ATGCTGGGCCAACTAATTCT+CGG - tig0021957:32031-32050 None:intergenic 45.0%
AGAATTAGTTGGCCCAGCAT+TGG + tig0021957:32031-32050 Msa1395610:three_prime_UTR 45.0%
! TAAGCCTCGGTGTGAAAAGT+GGG + tig0021957:32150-32169 Msa1395610:three_prime_UTR 45.0%
!! AAAGTGGGTTGCCGTATGTT+TGG + tig0021957:32165-32184 Msa1395610:three_prime_UTR 45.0%
ATGGGAAGGGGTGAAATTGA+TGG + tig0021957:32229-32248 Msa1395610:three_prime_UTR 45.0%
AGTGAAGGAACAACTTGGGA+AGG + tig0021957:32337-32356 Msa1395610:three_prime_UTR 45.0%
TCAGCGGCTTTCGAAAACAT+AGG - tig0021957:32368-32387 None:intergenic 45.0%
!! GTTAAGCTCTGGAAGTCAGT+TGG + tig0021957:32404-32423 Msa1395610:three_prime_UTR 45.0%
CAATAACCTGGGTGCATGTT+TGG - tig0021957:32635-32654 None:intergenic 45.0%
AGCCATTAGGGCAATAACCT+GGG - tig0021957:32646-32665 None:intergenic 45.0%
AAGCCATTAGGGCAATAACC+TGG - tig0021957:32647-32666 None:intergenic 45.0%
GCGTGACTGAGTTAGATTGA+AGG + tig0021957:32734-32753 Msa1395610:three_prime_UTR 45.0%
CATCAGCATTAGCAAGACCT+TGG - tig0021957:32843-32862 None:intergenic 45.0%
CAAGGTCTTGCTAATGCTGA+TGG + tig0021957:32841-32860 Msa1395610:three_prime_UTR 45.0%
CGGAGATGTCGGAGAGATTA+AGG - tig0021957:29941-29960 None:intergenic 50.0%
GAGAGAGAGATCGGAGATGT+CGG - tig0021957:29952-29971 None:intergenic 50.0%
TTGCATGCACATTGTGGCTG+CGG + tig0021957:30519-30538 Msa1395610:intron 50.0%
CTCACTGGTAGGAAGAACAG+GGG - tig0021957:31154-31173 None:intergenic 50.0%
! AGGCGGCCAATCTAGACTTT+TGG + tig0021957:31336-31355 Msa1395610:three_prime_UTR 50.0%
AGTCAAAGATCCTGCCCTGA+AGG + tig0021957:31512-31531 Msa1395610:three_prime_UTR 50.0%
!! CTCTGAAATTGAGCGAGTGG+TGG + tig0021957:31581-31600 Msa1395610:three_prime_UTR 50.0%
GTTCCAGCAAAAGATGACGC+GGG + tig0021957:31702-31721 Msa1395610:three_prime_UTR 50.0%
TTCCAGCAAAAGATGACGCG+GGG + tig0021957:31703-31722 Msa1395610:three_prime_UTR 50.0%
GGGGAATGTAGTAGATGCTG+TGG + tig0021957:31722-31741 Msa1395610:three_prime_UTR 50.0%
TACCCATTTAGCCTCCGAAG+TGG + tig0021957:31840-31859 Msa1395610:three_prime_UTR 50.0%
ACCCATTTAGCCTCCGAAGT+GGG + tig0021957:31841-31860 Msa1395610:three_prime_UTR 50.0%
GAGCACAATCAACCCCACTT+CGG - tig0021957:31857-31876 None:intergenic 50.0%
GTTGATTGTGCTCTGTCGTG+TGG + tig0021957:31864-31883 Msa1395610:three_prime_UTR 50.0%
CAACATGGCTCTCGTAGGAA+CGG - tig0021957:31979-31998 None:intergenic 50.0%
GATTCCACTCACTGGCAACA+TGG - tig0021957:31994-32013 None:intergenic 50.0%
! ATTGGTCCCAGCTTTGGTGT+TGG + tig0021957:32049-32068 Msa1395610:three_prime_UTR 50.0%
AGGAGAAGGAAAGCTCAGGT+GGG + tig0021957:32073-32092 Msa1395610:three_prime_UTR 50.0%
AAAGCTCAGGTGGGAAACTG+TGG + tig0021957:32082-32101 Msa1395610:three_prime_UTR 50.0%
! TTTTCACACCGAGGCTTAGG+TGG - tig0021957:32148-32167 None:intergenic 50.0%
! CACTTTTCACACCGAGGCTT+AGG - tig0021957:32151-32170 None:intergenic 50.0%
! CTAAGCCTCGGTGTGAAAAG+TGG + tig0021957:32149-32168 Msa1395610:three_prime_UTR 50.0%
GGAAGGGGTGAAATTGATGG+AGG + tig0021957:32232-32251 Msa1395610:three_prime_UTR 50.0%
CGAGATGGCCAAATCAGTGA+AGG + tig0021957:32322-32341 Msa1395610:three_prime_UTR 50.0%
TTGTGGGACCGTGATTTCTG+CGG + tig0021957:32541-32560 Msa1395610:three_prime_UTR 50.0%
GTGAATCCAAACATGCACCC+AGG + tig0021957:32626-32645 Msa1395610:three_prime_UTR 50.0%
CACCCAGGTTATTGCCCTAA+TGG + tig0021957:32641-32660 Msa1395610:three_prime_UTR 50.0%
TGGAGTTCTTCCTTCAGGGC+AGG - tig0021957:31525-31544 None:intergenic 55.0%
! TTCCCCGCGTCATCTTTTGC+TGG - tig0021957:31708-31727 None:intergenic 55.0%
AAGGTGTAGCAGGGGTCTTG+AGG - tig0021957:31764-31783 None:intergenic 55.0%
CCCCACTTCGGAGGCTAAAT+GGG - tig0021957:31845-31864 None:intergenic 55.0%
CCCATTTAGCCTCCGAAGTG+GGG + tig0021957:31842-31861 Msa1395610:three_prime_UTR 55.0%
ACCCCACTTCGGAGGCTAAA+TGG - tig0021957:31846-31865 None:intergenic 55.0%
CACAATCAACCCCACTTCGG+AGG - tig0021957:31854-31873 None:intergenic 55.0%
! GTGTGGACTGTGGCTCAATC+TGG + tig0021957:31881-31900 Msa1395610:three_prime_UTR 55.0%
AGACCTAGATGCGCCAACAC+AGG + tig0021957:31905-31924 Msa1395610:three_prime_UTR 55.0%
!! GTTGGCTTGAGAGCCTGTGT+TGG - tig0021957:31921-31940 None:intergenic 55.0%
AGGCTCTCAAGCCAACACAG+AGG + tig0021957:31925-31944 Msa1395610:three_prime_UTR 55.0%
ACTGGCAACATGGCTCTCGT+AGG - tig0021957:31984-32003 None:intergenic 55.0%
AGAGCCATGTTGCCAGTGAG+TGG + tig0021957:31987-32006 Msa1395610:three_prime_UTR 55.0%
CCAAAGCTGGGACCAATGCT+GGG - tig0021957:32046-32065 None:intergenic 55.0%
ACCAAAGCTGGGACCAATGC+TGG - tig0021957:32047-32066 None:intergenic 55.0%
CTCCTGCCAACACCAAAGCT+GGG - tig0021957:32058-32077 None:intergenic 55.0%
TCTCCTGCCAACACCAAAGC+TGG - tig0021957:32059-32078 None:intergenic 55.0%
!! GCTTTGGTGTTGGCAGGAGA+AGG + tig0021957:32059-32078 Msa1395610:three_prime_UTR 55.0%
TGGCAGGAGAAGGAAAGCTC+AGG + tig0021957:32069-32088 Msa1395610:three_prime_UTR 55.0%
CAGGAGAAGGAAAGCTCAGG+TGG + tig0021957:32072-32091 Msa1395610:three_prime_UTR 55.0%
GTATGCGACCACCTAAGCCT+CGG + tig0021957:32137-32156 Msa1395610:three_prime_UTR 55.0%
!! GCAACCCACTTTTCACACCG+AGG - tig0021957:32157-32176 None:intergenic 55.0%
TCTGGCGTCGTAGCTGATTG+CGG - tig0021957:32290-32309 None:intergenic 55.0%
TTCGAAAGCCGCTGATGCCA+TGG + tig0021957:32373-32392 Msa1395610:three_prime_UTR 55.0%
GAGCTTAACCCACTCTGCCA+TGG - tig0021957:32393-32412 None:intergenic 55.0%
!! TGGCAGAGTGGGTTAAGCTC+TGG + tig0021957:32393-32412 Msa1395610:three_prime_UTR 55.0%
GCAGGGTTCAGCGTGTGAAG+AGG + tig0021957:29565-29584 Msa1395610:five_prime_UTR 60.0%
! GTGCTCTGTCGTGTGGACTG+TGG + tig0021957:31871-31890 Msa1395610:three_prime_UTR 60.0%
! GAGCCTGTGTTGGCGCATCT+AGG - tig0021957:31911-31930 None:intergenic 60.0%
!! CCCAGCATTGGTCCCAGCTT+TGG + tig0021957:32043-32062 Msa1395610:three_prime_UTR 60.0%
!! GTCCCAGCTTTGGTGTTGGC+AGG + tig0021957:32053-32072 Msa1395610:three_prime_UTR 60.0%
GCAATCAGCTACGACGCCAG+AGG + tig0021957:32289-32308 Msa1395610:three_prime_UTR 60.0%
ATCTCGACCACGCAGTCCTC+TGG - tig0021957:32308-32327 None:intergenic 60.0%
AGAGGACTGCGTGGTCGAGA+TGG + tig0021957:32307-32326 Msa1395610:three_prime_UTR 60.0%
CCACTCTGCCATGGCATCAG+CGG - tig0021957:32384-32403 None:intergenic 60.0%
CGCTGATGCCATGGCAGAGT+GGG + tig0021957:32382-32401 Msa1395610:three_prime_UTR 60.0%
TACGACGCCAGAGGACTGCG+TGG + tig0021957:32298-32317 Msa1395610:three_prime_UTR 65.0%
CCGCTGATGCCATGGCAGAG+TGG + tig0021957:32381-32400 Msa1395610:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
tig0021957 gene 29565 32883 29565 ID=Msa1395610;Name=Msa1395610
tig0021957 mRNA 29565 32883 29565 ID=Msa1395610-mRNA-1;Parent=Msa1395610;Name=Msa1395610-mRNA-1;_AED=0.00;_eAED=0.00;_QI=326|1|1|1|1|1|3|1603|87
tig0021957 exon 29565 30004 29565 ID=Msa1395610-mRNA-1:exon:14948;Parent=Msa1395610-mRNA-1
tig0021957 exon 31039 31168 31039 ID=Msa1395610-mRNA-1:exon:14949;Parent=Msa1395610-mRNA-1
tig0021957 exon 31261 32883 31261 ID=Msa1395610-mRNA-1:exon:14950;Parent=Msa1395610-mRNA-1
tig0021957 five_prime_UTR 29565 29890 29565 ID=Msa1395610-mRNA-1:five_prime_utr;Parent=Msa1395610-mRNA-1
tig0021957 CDS 29891 30004 29891 ID=Msa1395610-mRNA-1:cds;Parent=Msa1395610-mRNA-1
tig0021957 CDS 31039 31168 31039 ID=Msa1395610-mRNA-1:cds;Parent=Msa1395610-mRNA-1
tig0021957 CDS 31261 31280 31261 ID=Msa1395610-mRNA-1:cds;Parent=Msa1395610-mRNA-1
tig0021957 three_prime_UTR 31281 32883 31281 ID=Msa1395610-mRNA-1:three_prime_utr;Parent=Msa1395610-mRNA-1
Gene Sequence

>Msa1395610

ATGAAAACACCGCCATCATTACTTTCTCTCACCATTGACTCAGCCGTCCTTAATCTCTCCGACATCTCCGATCTCTCTCTCATCCCTGATCACATTCTTCTAGATCTCTTCCTGAGAATATTGAAAGCTGGAAAGCTGACTGAAAAAGTTCTGAAACTGTTTATAGCAACTGGTAATGAGGAAGTAATTGCACTTGTTCAAGCACTGAATATCCGACATATTGTGACCCCTGTTCTTCCTACCAGATGTTCTGAGAAATTCTAA
Protein sequence

>Msa1395610

MKTPPSLLSLTIDSAVLNLSDISDLSLIPDHILLDLFLRILKAGKLTEKVLKLFIATGNEEVIALVQALNIRHIVTPVLPTRCSEKF*