Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028750 | XP_024626251.1 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 2.80e-51 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028750 | A2Q1P9 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 1.34e-51 | 166 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0775660 | Msa1028750 | 0.804433 | 2.165255e-49 | -8.615850e-47 |
| Msa0838620 | Msa1028750 | -0.802356 | 5.832765e-49 | -8.615850e-47 |
| Msa1028750 | Msa1067880 | 0.844443 | 7.535622e-59 | -8.615850e-47 |
| Msa1028750 | Msa1395610 | 0.867339 | 1.472198e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028750 | MtrunA17_Chr7g0249041 | 97.701 | 87 | 2 | 0 | 1 | 87 | 1 | 87 | 2.57e-55 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028750 | AT4G30390.1 | 65.476 | 84 | 29 | 0 | 4 | 87 | 5 | 88 | 3.36e-36 | 118 |
Find 167 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAAATCCTTCGGGAATT+TGG | 0.098316 | 7_1:+61932285 | None:intergenic |
| AGAATAAAATAGTACTTATT+TGG | 0.167085 | 7_1:-61931068 | Msa1028750:three_prime_UTR |
| GGTTACGCTTGTAGATATTT+TGG | 0.181272 | 7_1:-61932197 | Msa1028750:three_prime_UTR |
| ACCCCACTTCGGAGGCTAAA+TGG | 0.182922 | 7_1:+61931984 | None:intergenic |
| ACACAAAATCAATTAGAATT+AGG | 0.213662 | 7_1:+61934126 | None:intergenic |
| GCCAACTAATTCTCGGTTAA+AGG | 0.225160 | 7_1:+61931806 | None:intergenic |
| CGGAGATGTCGGAGAGATTA+AGG | 0.252011 | 7_1:+61933875 | None:intergenic |
| GACTTCCATTCATTCATAAA+AGG | 0.270719 | 7_1:+61932365 | None:intergenic |
| CCCAGCATTGGTCCCAGCTT+TGG | 0.273271 | 7_1:-61931784 | Msa1028750:three_prime_UTR |
| CAATAACCTGGGTGCATGTT+TGG | 0.279846 | 7_1:+61931195 | None:intergenic |
| TTCTTTCTTCAAGCTGTCTA+TGG | 0.288528 | 7_1:+61931620 | None:intergenic |
| CATCCTCCATTAGGATTTGT+AGG | 0.298893 | 7_1:-61931351 | Msa1028750:three_prime_UTR |
| GAATTTGGAGTTCTTCCTTC+AGG | 0.313980 | 7_1:+61932300 | None:intergenic |
| TGTTGTCTTGCTTTATCATT+TGG | 0.318279 | 7_1:-61931025 | Msa1028750:three_prime_UTR |
| CACAAAATCAATTAGAATTA+GGG | 0.327977 | 7_1:+61934127 | None:intergenic |
| CACCCAGGTTATTGCCCTAA+TGG | 0.329093 | 7_1:-61931186 | Msa1028750:three_prime_UTR |
| AAGTTGTTCCTTCACTGATT+TGG | 0.332158 | 7_1:+61931497 | None:intergenic |
| TACGAAATATATAAGCCATT+AGG | 0.335934 | 7_1:+61931171 | None:intergenic |
| AATTTGTTGTTTATATAAAC+AGG | 0.340916 | 7_1:-61933970 | Msa1028750:five_prime_UTR |
| AACTCAACAGGCTTAAATTA+AGG | 0.343033 | 7_1:-61932511 | Msa1028750:three_prime_UTR |
| ACGAAATATATAAGCCATTA+GGG | 0.343120 | 7_1:+61931172 | None:intergenic |
| AGGCGGCCAATCTAGACTTT+TGG | 0.343637 | 7_1:-61932491 | Msa1028750:three_prime_UTR |
| AACTCACTGGTAGGAAGAAC+AGG | 0.344126 | 7_1:+61932674 | None:intergenic |
| GAGTTGTTTCATCCTCCATT+AGG | 0.351348 | 7_1:-61931360 | Msa1028750:three_prime_UTR |
| AACTAATAGTTGGCATGGTC+TGG | 0.355399 | 7_1:-61931382 | Msa1028750:three_prime_UTR |
| ACTATTAGTTCACGAGCTTC+AGG | 0.358178 | 7_1:+61931395 | None:intergenic |
| CAGGATCTTTGACTATTATC+AGG | 0.362076 | 7_1:+61932324 | None:intergenic |
| CTGAAACTGTTTATAGCAAC+TGG | 0.365834 | 7_1:-61932752 | Msa1028750:CDS |
| ACCAAAGCTGGGACCAATGC+TGG | 0.375478 | 7_1:+61931783 | None:intergenic |
| TCCACTTCTATTCGCTTCTC+TGG | 0.381049 | 7_1:-61932218 | Msa1028750:three_prime_UTR |
| GTTTAGATTGGTGATGTGTT+TGG | 0.402482 | 7_1:-61931317 | Msa1028750:three_prime_UTR |
| GACTATTATCAGGTGGAAAC+GGG | 0.402580 | 7_1:+61932334 | None:intergenic |
| ATGGGAAGGGGTGAAATTGA+TGG | 0.404928 | 7_1:-61931598 | Msa1028750:three_prime_UTR |
| CCCCACTTCGGAGGCTAAAT+GGG | 0.405485 | 7_1:+61931985 | None:intergenic |
| GTCCCAGCTTTGGTGTTGGC+AGG | 0.407640 | 7_1:-61931774 | Msa1028750:three_prime_UTR |
| ATCTCGACCACGCAGTCCTC+TGG | 0.407680 | 7_1:+61931522 | None:intergenic |
| GACATCTGCACTAAATCCTT+CGG | 0.408413 | 7_1:+61932277 | None:intergenic |
| TCTCCTGCCAACACCAAAGC+TGG | 0.408713 | 7_1:+61931771 | None:intergenic |
| CACAAACCAAAAGTCTAGAT+TGG | 0.413516 | 7_1:+61932485 | None:intergenic |
| ACGTTTGACTCCAACTCAAC+AGG | 0.414739 | 7_1:-61932523 | Msa1028750:three_prime_UTR |
| GTGTGGACTGTGGCTCAATC+TGG | 0.418802 | 7_1:-61931946 | Msa1028750:three_prime_UTR |
| CATTCTTCTAGATCTCTTCC+TGG | 0.422448 | 7_1:-61933830 | Msa1028750:intron |
| AGATCTAGAAGAATGTGATC+AGG | 0.429631 | 7_1:+61933838 | None:intergenic |
| CTCACTCCTACAAATCCTAA+TGG | 0.431086 | 7_1:+61931345 | None:intergenic |
| ACATCTGCACTAAATCCTTC+GGG | 0.431937 | 7_1:+61932278 | None:intergenic |
| TGACTATTATCAGGTGGAAA+CGG | 0.435701 | 7_1:+61932333 | None:intergenic |
| TTAAAGAAGAAAGGTGTAGC+AGG | 0.438138 | 7_1:+61932056 | None:intergenic |
| TAAAGCTTCCGCAAAATTCA+CGG | 0.444149 | 7_1:+61931278 | None:intergenic |
| TCAGATTATTAAAGAATTCG+TGG | 0.449660 | 7_1:+61934026 | None:intergenic |
| AAAGTGGGTTGCCGTATGTT+TGG | 0.450892 | 7_1:-61931662 | Msa1028750:three_prime_UTR |
| ACCCATTTAGCCTCCGAAGT+GGG | 0.451793 | 7_1:-61931986 | Msa1028750:three_prime_UTR |
| GCCTTTAACCGAGAATTAGT+TGG | 0.454901 | 7_1:-61931807 | Msa1028750:three_prime_UTR |
| GGGAAACTGTGGAAGATATA+TGG | 0.454942 | 7_1:-61931734 | Msa1028750:three_prime_UTR |
| GGCAAATAGTGCATTGTGAT+TGG | 0.456424 | 7_1:+61930933 | None:intergenic |
| AAGCCATTAGGGCAATAACC+TGG | 0.466614 | 7_1:+61931183 | None:intergenic |
| TAGACAGCTTGAAGAAAGAA+TGG | 0.467447 | 7_1:-61931617 | Msa1028750:three_prime_UTR |
| CGCTGATGCCATGGCAGAGT+GGG | 0.477662 | 7_1:-61931445 | Msa1028750:three_prime_UTR |
| AATTTGGAGTTCTTCCTTCA+GGG | 0.480278 | 7_1:+61932301 | None:intergenic |
| TTAATTTAAGCCTGTTGAGT+TGG | 0.483064 | 7_1:+61932513 | None:intergenic |
| TATCTTGAATTCCTCTGTGT+TGG | 0.484553 | 7_1:+61931891 | None:intergenic |
| GAACAAAATCTGCACCCTTA+CGG | 0.484567 | 7_1:+61932015 | None:intergenic |
| GAGTGAGTGCATGTTTAGAT+TGG | 0.485799 | 7_1:-61931329 | Msa1028750:three_prime_UTR |
| ATTAAGGACGGCTGAGTCAA+TGG | 0.488201 | 7_1:+61933891 | None:intergenic |
| ATGCTGGGCCAACTAATTCT+CGG | 0.493427 | 7_1:+61931799 | None:intergenic |
| CTTTCATTTCTCCAAACATA+CGG | 0.497867 | 7_1:+61931651 | None:intergenic |
| GAGCCTGTGTTGGCGCATCT+AGG | 0.503951 | 7_1:+61931919 | None:intergenic |
| ATCAGGGATGAGAGAGAGAT+CGG | 0.511014 | 7_1:+61933855 | None:intergenic |
| AACTTTACAGACTGAAAGAA+AGG | 0.511586 | 7_1:+61931564 | None:intergenic |
| TATAGTGTATTAAAGAAGAA+AGG | 0.512361 | 7_1:+61932047 | None:intergenic |
| GCGTGACTGAGTTAGATTGA+AGG | 0.512473 | 7_1:-61931093 | Msa1028750:three_prime_UTR |
| GGAAAGAACACAGAGATTGA+TGG | 0.516782 | 7_1:-61934061 | Msa1028750:five_prime_UTR |
| TGGCAGAGTGGGTTAAGCTC+TGG | 0.517333 | 7_1:-61931434 | Msa1028750:three_prime_UTR |
| TGGAGTTCTTCCTTCAGGGC+AGG | 0.518206 | 7_1:+61932305 | None:intergenic |
| TTCGAAAGCCGCTGATGCCA+TGG | 0.519664 | 7_1:-61931454 | Msa1028750:three_prime_UTR |
| AGAATTAGTTGGCCCAGCAT+TGG | 0.520079 | 7_1:-61931796 | Msa1028750:three_prime_UTR |
| ATTGGTCCCAGCTTTGGTGT+TGG | 0.521152 | 7_1:-61931778 | Msa1028750:three_prime_UTR |
| GCTTTGGTGTTGGCAGGAGA+AGG | 0.521241 | 7_1:-61931768 | Msa1028750:three_prime_UTR |
| AAATCAGTGAAGGAACAACT+TGG | 0.521373 | 7_1:-61931495 | Msa1028750:three_prime_UTR |
| CTAAGCCTCGGTGTGAAAAG+TGG | 0.526128 | 7_1:-61931678 | Msa1028750:three_prime_UTR |
| GAAGCTCGTGAACTAATAGT+TGG | 0.527744 | 7_1:-61931392 | Msa1028750:three_prime_UTR |
| GAGAGAGAGATCGGAGATGT+CGG | 0.529629 | 7_1:+61933864 | None:intergenic |
| AGACAGCTTGAAGAAAGAAT+GGG | 0.532129 | 7_1:-61931616 | Msa1028750:three_prime_UTR |
| CCAAAGCTGGGACCAATGCT+GGG | 0.532879 | 7_1:+61931784 | None:intergenic |
| GTGCAGAGAATATTGAAAGC+TGG | 0.536542 | 7_1:-61932794 | Msa1028750:intron |
| GTTTATAGCAACTGGTAATG+AGG | 0.537844 | 7_1:-61932744 | Msa1028750:CDS |
| CTCTGAAATTGAGCGAGTGG+TGG | 0.538006 | 7_1:-61932246 | Msa1028750:three_prime_UTR |
| AATTTGAAAAGAAGAAATAG+AGG | 0.541103 | 7_1:-61934086 | Msa1028750:five_prime_UTR |
| AGTCAAAGATCCTGCCCTGA+AGG | 0.547063 | 7_1:-61932315 | Msa1028750:three_prime_UTR |
| ACTATATGATCCATTCCGTA+AGG | 0.553697 | 7_1:-61932030 | Msa1028750:three_prime_UTR |
| CAGGAGAAGGAAAGCTCAGG+TGG | 0.555962 | 7_1:-61931755 | Msa1028750:three_prime_UTR |
| CTCCTGCCAACACCAAAGCT+GGG | 0.557867 | 7_1:+61931772 | None:intergenic |
| GATTCCACTCACTGGCAACA+TGG | 0.560139 | 7_1:+61931836 | None:intergenic |
| CCCATTTAGCCTCCGAAGTG+GGG | 0.561643 | 7_1:-61931985 | Msa1028750:three_prime_UTR |
| ACCAGAGAAGCGAATAGAAG+TGG | 0.561782 | 7_1:+61932217 | None:intergenic |
| GTTGGCTTGAGAGCCTGTGT+TGG | 0.565124 | 7_1:+61931909 | None:intergenic |
| AGAGGACTGCGTGGTCGAGA+TGG | 0.569270 | 7_1:-61931520 | Msa1028750:three_prime_UTR |
| AAATCTGCACCCTTACGGAA+TGG | 0.569993 | 7_1:+61932020 | None:intergenic |
| TCTGGCGTCGTAGCTGATTG+TGG | 0.570688 | 7_1:+61931540 | None:intergenic |
| TCTGAAATTGAGCGAGTGGT+GGG | 0.574447 | 7_1:-61932245 | Msa1028750:three_prime_UTR |
| GTTGATTGTGCTCTGTCGTG+TGG | 0.577748 | 7_1:-61931963 | Msa1028750:three_prime_UTR |
| AGACCTAGATGCGCCAACAC+AGG | 0.578067 | 7_1:-61931922 | Msa1028750:three_prime_UTR |
| GTTAAGCTCTGGAAGTCAGT+TGG | 0.579934 | 7_1:-61931423 | Msa1028750:three_prime_UTR |
| GATCTAGAAGAATGTGATCA+GGG | 0.580760 | 7_1:+61933839 | None:intergenic |
| GTGTTTGGCAAAATCATTGT+GGG | 0.580946 | 7_1:-61931302 | Msa1028750:three_prime_UTR |
| TCGTGAACTAATAGTTGGCA+TGG | 0.583069 | 7_1:-61931387 | Msa1028750:three_prime_UTR |
| GCAATGTTGATTCCACTCAC+TGG | 0.584544 | 7_1:+61931828 | None:intergenic |
| TGGCAGGAGAAGGAAAGCTC+AGG | 0.584833 | 7_1:-61931758 | Msa1028750:three_prime_UTR |
| TGAAAAGAAGAAATAGAGGA+CGG | 0.585737 | 7_1:-61934082 | Msa1028750:five_prime_UTR |
| AGAGCCATGTTGCCAGTGAG+TGG | 0.586101 | 7_1:-61931840 | Msa1028750:three_prime_UTR |
| ATGGTGAGAGAAAGTAATGA+TGG | 0.588762 | 7_1:+61933910 | None:intergenic |
| ATTATTAAAGAATTCGTGGA+GGG | 0.591719 | 7_1:+61934030 | None:intergenic |
| AATTCTTTAATAATCTGAGA+AGG | 0.593117 | 7_1:-61934021 | Msa1028750:five_prime_UTR |
| GCTTGAAGAAAGAATGGGAA+GGG | 0.593851 | 7_1:-61931611 | Msa1028750:three_prime_UTR |
| GAGCTTAACCCACTCTGCCA+TGG | 0.594397 | 7_1:+61931437 | None:intergenic |
| TAAGCCTCGGTGTGAAAAGT+GGG | 0.598697 | 7_1:-61931677 | Msa1028750:three_prime_UTR |
| TAAAGAAGAAAGGTGTAGCA+GGG | 0.600590 | 7_1:+61932057 | None:intergenic |
| CTATATGATCCATTCCGTAA+GGG | 0.604465 | 7_1:-61932029 | Msa1028750:three_prime_UTR |
| CCACTCTGCCATGGCATCAG+CGG | 0.607023 | 7_1:+61931446 | None:intergenic |
| GTGCTCTGTCGTGTGGACTG+TGG | 0.608262 | 7_1:-61931956 | Msa1028750:three_prime_UTR |
| TATGTTTGGAGAAATGAAAG+AGG | 0.608956 | 7_1:-61931648 | Msa1028750:three_prime_UTR |
| AAAGCTCAGGTGGGAAACTG+TGG | 0.612768 | 7_1:-61931745 | Msa1028750:three_prime_UTR |
| CGAGATGGCCAAATCAGTGA+AGG | 0.615435 | 7_1:-61931505 | Msa1028750:three_prime_UTR |
| AACGAAGTTGACATTGTGAT+CGG | 0.616081 | 7_1:-61932410 | Msa1028750:three_prime_UTR |
| GATCTTTGACTATTATCAGG+TGG | 0.616826 | 7_1:+61932327 | None:intergenic |
| GTATGCGACCACCTAAGCCT+CGG | 0.617533 | 7_1:-61931690 | Msa1028750:three_prime_UTR |
| CCGCTGATGCCATGGCAGAG+TGG | 0.618375 | 7_1:-61931446 | Msa1028750:three_prime_UTR |
| AAGGTGTAGCAGGGGTCTTG+AGG | 0.619352 | 7_1:+61932066 | None:intergenic |
| AGTGAAGGAACAACTTGGGA+AGG | 0.619719 | 7_1:-61931490 | Msa1028750:three_prime_UTR |
| TACCCATTTAGCCTCCGAAG+TGG | 0.620536 | 7_1:-61931987 | Msa1028750:three_prime_UTR |
| AGAGAAGCGAATAGAAGTGG+AGG | 0.622245 | 7_1:+61932220 | None:intergenic |
| CAACATGGCTCTCGTAGGAA+CGG | 0.623643 | 7_1:+61931851 | None:intergenic |
| AATCAGTGAAGGAACAACTT+GGG | 0.624801 | 7_1:-61931494 | Msa1028750:three_prime_UTR |
| ATTCATTCATAAAAGGAGTG+AGG | 0.628201 | 7_1:+61932372 | None:intergenic |
| GGAAGGGGTGAAATTGATGG+AGG | 0.629194 | 7_1:-61931595 | Msa1028750:three_prime_UTR |
| AAACTCTGAAATTGAGCGAG+TGG | 0.630141 | 7_1:-61932249 | Msa1028750:three_prime_UTR |
| AGCCATTAGGGCAATAACCT+GGG | 0.630899 | 7_1:+61931184 | None:intergenic |
| GAACAGGGGTCACAATATGT+CGG | 0.636120 | 7_1:+61932690 | None:intergenic |
| GAGCACAATCAACCCCACTT+CGG | 0.641756 | 7_1:+61931973 | None:intergenic |
| CACAATCAACCCCACTTCGG+AGG | 0.642239 | 7_1:+61931976 | None:intergenic |
| CTTGAAGAAAGAATGGGAAG+GGG | 0.643591 | 7_1:-61931610 | Msa1028750:three_prime_UTR |
| ACTGGCAACATGGCTCTCGT+AGG | 0.644873 | 7_1:+61931846 | None:intergenic |
| AAAGAAGAAAGGTGTAGCAG+GGG | 0.647705 | 7_1:+61932058 | None:intergenic |
| GTTCCAGCAAAAGATGACGC+GGG | 0.649072 | 7_1:-61932125 | Msa1028750:three_prime_UTR |
| AAAATCAATTAGAATTAGGG+AGG | 0.650213 | 7_1:+61934130 | None:intergenic |
| ATTACTTGAGACATCTTGTG+AGG | 0.652560 | 7_1:+61932443 | None:intergenic |
| AGCTTGAAGAAAGAATGGGA+AGG | 0.654031 | 7_1:-61931612 | Msa1028750:three_prime_UTR |
| TCAGCGGCTTTCGAAAACAT+AGG | 0.655253 | 7_1:+61931462 | None:intergenic |
| GGGGAATGTAGTAGATGCTG+TGG | 0.657954 | 7_1:-61932105 | Msa1028750:three_prime_UTR |
| TTCCAGCAAAAGATGACGCG+GGG | 0.659790 | 7_1:-61932124 | Msa1028750:three_prime_UTR |
| TGTTCCAGCAAAAGATGACG+CGG | 0.661904 | 7_1:-61932126 | Msa1028750:three_prime_UTR |
| GAGTTTGAGAGAATCACAGT+GGG | 0.666636 | 7_1:+61931227 | None:intergenic |
| ACTCCTACAAATCCTAATGG+AGG | 0.670063 | 7_1:+61931348 | None:intergenic |
| TCAACAGGCTTAAATTAAGG+CGG | 0.673941 | 7_1:-61932508 | Msa1028750:three_prime_UTR |
| GATGTCGGAGAGATTAAGGA+CGG | 0.674146 | 7_1:+61933879 | None:intergenic |
| GAAGAACTCCAAATTCCCGA+AGG | 0.676927 | 7_1:-61932293 | Msa1028750:three_prime_UTR |
| GTGAATCCAAACATGCACCC+AGG | 0.681674 | 7_1:-61931201 | Msa1028750:three_prime_UTR |
| AGGAGAAGGAAAGCTCAGGT+GGG | 0.684548 | 7_1:-61931754 | Msa1028750:three_prime_UTR |
| ACAATCAGCTACGACGCCAG+AGG | 0.686961 | 7_1:-61931538 | Msa1028750:three_prime_UTR |
| ACTGTGGAAGATATATGGTG+TGG | 0.687243 | 7_1:-61931729 | Msa1028750:three_prime_UTR |
| GATTATTAAAGAATTCGTGG+AGG | 0.687349 | 7_1:+61934029 | None:intergenic |
| ACAGAGGAATTCAAGATACG+TGG | 0.688219 | 7_1:-61931886 | Msa1028750:three_prime_UTR |
| ACTCACTGGTAGGAAGAACA+GGG | 0.694442 | 7_1:+61932675 | None:intergenic |
| TGTGTTTGGCAAAATCATTG+TGG | 0.704026 | 7_1:-61931303 | Msa1028750:three_prime_UTR |
| GTGAGAGAAAGTAATGATGG+CGG | 0.736980 | 7_1:+61933913 | None:intergenic |
| TGAGTTTGAGAGAATCACAG+TGG | 0.743087 | 7_1:+61931226 | None:intergenic |
| CTCACTGGTAGGAAGAACAG+GGG | 0.761648 | 7_1:+61932676 | None:intergenic |
| AGGCTCTCAAGCCAACACAG+AGG | 0.778427 | 7_1:-61931902 | Msa1028750:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACTTATGATTATATAATA+TGG | + | chr7_1:61931474-61931493 | None:intergenic | 10.0% |
| !!! | AAAATTTTATCATGTATTTA+TGG | - | chr7_1:61932450-61932469 | Msa1028750:three_prime_UTR | 10.0% |
| !! | ATATTTGTAAATTATTATAC+AGG | - | chr7_1:61932508-61932527 | Msa1028750:three_prime_UTR | 10.0% |
| !!! | AATTTGTTGTTTATATAAAC+AGG | - | chr7_1:61931126-61931145 | Msa1028750:three_prime_UTR | 15.0% |
| !! | AATAAAGAAAAATTGAGAAA+GGG | + | chr7_1:61931363-61931382 | None:intergenic | 15.0% |
| !! | AAATAAAGAAAAATTGAGAA+AGG | + | chr7_1:61931364-61931383 | None:intergenic | 15.0% |
| !! | TATCAACAAAAAAAACAAAA+GGG | + | chr7_1:61931405-61931424 | None:intergenic | 15.0% |
| !! | ATATCAACAAAAAAAACAAA+AGG | + | chr7_1:61931406-61931425 | None:intergenic | 15.0% |
| !! | ATGATTATATAATATGGATA+AGG | + | chr7_1:61931468-61931487 | None:intergenic | 15.0% |
| !!! | ATACTCATTTATCTTTTTTA+TGG | - | chr7_1:61931907-61931926 | Msa1028750:three_prime_UTR | 15.0% |
| !!! | TACTCATTTATCTTTTTTAT+GGG | - | chr7_1:61931908-61931927 | Msa1028750:three_prime_UTR | 15.0% |
| !!! | AAAATTTTAAAATAACTCAC+TGG | + | chr7_1:61932438-61932457 | None:intergenic | 15.0% |
| !! | AGAATAAAATAGTACTTATT+TGG | - | chr7_1:61934028-61934047 | Msa1028750:five_prime_UTR | 15.0% |
| !! | CACAAAATCAATTAGAATTA+GGG | + | chr7_1:61930972-61930991 | None:intergenic | 20.0% |
| !! | ACACAAAATCAATTAGAATT+AGG | + | chr7_1:61930973-61930992 | None:intergenic | 20.0% |
| !! | AATTTGAAAAGAAGAAATAG+AGG | - | chr7_1:61931010-61931029 | Msa1028750:three_prime_UTR | 20.0% |
| !! | AATTCTTTAATAATCTGAGA+AGG | - | chr7_1:61931075-61931094 | Msa1028750:three_prime_UTR | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+TGG | + | chr7_1:61931639-61931658 | None:intergenic | 20.0% |
| !!! | ACTCATTTATCTTTTTTATG+GGG | - | chr7_1:61931909-61931928 | Msa1028750:three_prime_UTR | 20.0% |
| !! | ACTTAATTATAGACAACAAA+AGG | + | chr7_1:61932200-61932219 | None:intergenic | 20.0% |
| !! | TATAGTGTATTAAAGAAGAA+AGG | + | chr7_1:61933052-61933071 | None:intergenic | 20.0% |
| ! | AAAATCAATTAGAATTAGGG+AGG | + | chr7_1:61930969-61930988 | None:intergenic | 25.0% |
| !!! | ATTGATTTTGTGTTGACAAA+TGG | - | chr7_1:61930980-61930999 | Msa1028750:three_prime_UTR | 25.0% |
| ! | ATTATTAAAGAATTCGTGGA+GGG | + | chr7_1:61931069-61931088 | None:intergenic | 25.0% |
| ! | TCAGATTATTAAAGAATTCG+TGG | + | chr7_1:61931073-61931092 | None:intergenic | 25.0% |
| !! | TAATGTTGTTTGCTTCTTTA+GGG | - | chr7_1:61931496-61931515 | Msa1028750:three_prime_UTR | 25.0% |
| ! | TTGTCTTTAGATGAATTTGT+TGG | - | chr7_1:61931571-61931590 | Msa1028750:three_prime_UTR | 25.0% |
| !! | TTAATATTTGATAGCCCAAT+AGG | + | chr7_1:61932015-61932034 | None:intergenic | 25.0% |
| ! | CTTACTAATTTGATCAGATA+AGG | + | chr7_1:61932083-61932102 | None:intergenic | 25.0% |
| ! | CTTATCTGATCAAATTAGTA+AGG | - | chr7_1:61932081-61932100 | Msa1028750:three_prime_UTR | 25.0% |
| !!! | CAGGATTTTGATTCATAATT+TGG | - | chr7_1:61932145-61932164 | Msa1028750:three_prime_UTR | 25.0% |
| ! | GATTTGATATATTGTAGATC+TGG | - | chr7_1:61932167-61932186 | Msa1028750:three_prime_UTR | 25.0% |
| !! | TATGCTAAAGTTTCTTCTTT+TGG | - | chr7_1:61932236-61932255 | Msa1028750:three_prime_UTR | 25.0% |
| !!! | TTTTAAAATAACTCACTGGT+AGG | + | chr7_1:61932434-61932453 | None:intergenic | 25.0% |
| ! | ACGAAATATATAAGCCATTA+GGG | + | chr7_1:61933927-61933946 | None:intergenic | 25.0% |
| ! | TACGAAATATATAAGCCATT+AGG | + | chr7_1:61933928-61933947 | None:intergenic | 25.0% |
| TGAAAAGAAGAAATAGAGGA+CGG | - | chr7_1:61931014-61931033 | Msa1028750:three_prime_UTR | 30.0% | |
| GATTATTAAAGAATTCGTGG+AGG | + | chr7_1:61931070-61931089 | None:intergenic | 30.0% | |
| GAGAGAATAAAAAGAATACC+AGG | + | chr7_1:61931287-61931306 | None:intergenic | 30.0% | |
| GTAGTTACTACTAGCTAATA+AGG | - | chr7_1:61931334-61931353 | Msa1028750:three_prime_UTR | 30.0% | |
| TATAATATGGATAAGGTCAC+AGG | + | chr7_1:61931461-61931480 | None:intergenic | 30.0% | |
| ! | GTAATGTTGTTTGCTTCTTT+AGG | - | chr7_1:61931495-61931514 | Msa1028750:three_prime_UTR | 30.0% |
| AGATTGTAGTTGGATCATTT+AGG | - | chr7_1:61931830-61931849 | Msa1028750:three_prime_UTR | 30.0% | |
| !! | GTGCCATCATTTTCTTATTT+GGG | - | chr7_1:61931951-61931970 | Msa1028750:three_prime_UTR | 30.0% |
| !! | CATCATTTTCTTATTTGGGA+GGG | - | chr7_1:61931955-61931974 | Msa1028750:three_prime_UTR | 30.0% |
| TATGAATCAAAATCCTGACA+AGG | + | chr7_1:61932142-61932161 | None:intergenic | 30.0% | |
| GAAAATTAAGAAATGCGATG+AGG | + | chr7_1:61932279-61932298 | None:intergenic | 30.0% | |
| TTAATTTAAGCCTGTTGAGT+TGG | + | chr7_1:61932586-61932605 | None:intergenic | 30.0% | |
| AACTCAACAGGCTTAAATTA+AGG | - | chr7_1:61932585-61932604 | Msa1028750:intron | 30.0% | |
| ATTCATTCATAAAAGGAGTG+AGG | + | chr7_1:61932727-61932746 | None:intergenic | 30.0% | |
| ! | TCACTCCTTTTATGAATGAA+TGG | - | chr7_1:61932726-61932745 | Msa1028750:CDS | 30.0% |
| GACTTCCATTCATTCATAAA+AGG | + | chr7_1:61932734-61932753 | None:intergenic | 30.0% | |
| CTTTCATTTCTCCAAACATA+CGG | + | chr7_1:61933448-61933467 | None:intergenic | 30.0% | |
| TATGTTTGGAGAAATGAAAG+AGG | - | chr7_1:61933448-61933467 | Msa1028750:intron | 30.0% | |
| AACTTTACAGACTGAAAGAA+AGG | + | chr7_1:61933535-61933554 | None:intergenic | 30.0% | |
| TGTTGTCTTGCTTTATCATT+TGG | - | chr7_1:61934071-61934090 | Msa1028750:five_prime_UTR | 30.0% | |
| ATGGTGAGAGAAAGTAATGA+TGG | + | chr7_1:61931189-61931208 | None:intergenic | 35.0% | |
| GATCTAGAAGAATGTGATCA+GGG | + | chr7_1:61931260-61931279 | None:intergenic | 35.0% | |
| AGATCTAGAAGAATGTGATC+AGG | + | chr7_1:61931261-61931280 | None:intergenic | 35.0% | |
| AAATTTGAGAGAGAGAGAGA+GGG | + | chr7_1:61931309-61931328 | None:intergenic | 35.0% | |
| GTGAAAGTTGTTGTCAAATG+TGG | - | chr7_1:61931750-61931769 | Msa1028750:three_prime_UTR | 35.0% | |
| ATCTGAGAACAACTAAGACT+TGG | - | chr7_1:61931864-61931883 | Msa1028750:three_prime_UTR | 35.0% | |
| TCTGAGAACAACTAAGACTT+GGG | - | chr7_1:61931865-61931884 | Msa1028750:three_prime_UTR | 35.0% | |
| ! | GGGTTGAATTGATAGTTATG+TGG | - | chr7_1:61931929-61931948 | Msa1028750:three_prime_UTR | 35.0% |
| !! | GGTGCCATCATTTTCTTATT+TGG | - | chr7_1:61931950-61931969 | Msa1028750:three_prime_UTR | 35.0% |
| CCTCCCAAATAAGAAAATGA+TGG | + | chr7_1:61931957-61931976 | None:intergenic | 35.0% | |
| !! | CCATCATTTTCTTATTTGGG+AGG | - | chr7_1:61931954-61931973 | Msa1028750:three_prime_UTR | 35.0% |
| ! | TACCTTGTGCTTTTCCTATT+GGG | - | chr7_1:61931998-61932017 | Msa1028750:three_prime_UTR | 35.0% |
| ! | TTTTCAGCAGCCATAGAATT+TGG | - | chr7_1:61932116-61932135 | Msa1028750:three_prime_UTR | 35.0% |
| AATTAAGAAATGCGATGAGG+AGG | + | chr7_1:61932276-61932295 | None:intergenic | 35.0% | |
| CTTTCAATATTCTCTGCACA+TGG | + | chr7_1:61932301-61932320 | None:intergenic | 35.0% | |
| CTGAAACTGTTTATAGCAAC+TGG | - | chr7_1:61932344-61932363 | Msa1028750:three_prime_UTR | 35.0% | |
| ! | GTTTATAGCAACTGGTAATG+AGG | - | chr7_1:61932352-61932371 | Msa1028750:three_prime_UTR | 35.0% |
| TCAACAGGCTTAAATTAAGG+CGG | - | chr7_1:61932588-61932607 | Msa1028750:intron | 35.0% | |
| CACAAACCAAAAGTCTAGAT+TGG | + | chr7_1:61932614-61932633 | None:intergenic | 35.0% | |
| ATTACTTGAGACATCTTGTG+AGG | + | chr7_1:61932656-61932675 | None:intergenic | 35.0% | |
| AACGAAGTTGACATTGTGAT+CGG | - | chr7_1:61932686-61932705 | Msa1028750:CDS | 35.0% | |
| TGACTATTATCAGGTGGAAA+CGG | + | chr7_1:61932766-61932785 | None:intergenic | 35.0% | |
| GATCTTTGACTATTATCAGG+TGG | + | chr7_1:61932772-61932791 | None:intergenic | 35.0% | |
| CAGGATCTTTGACTATTATC+AGG | + | chr7_1:61932775-61932794 | None:intergenic | 35.0% | |
| ! | AATTTGGAGTTCTTCCTTCA+GGG | + | chr7_1:61932798-61932817 | None:intergenic | 35.0% |
| ! | GGTTACGCTTGTAGATATTT+TGG | - | chr7_1:61932899-61932918 | Msa1028750:intron | 35.0% |
| ! | TAAAGAAGAAAGGTGTAGCA+GGG | + | chr7_1:61933042-61933061 | None:intergenic | 35.0% |
| ! | TTAAAGAAGAAAGGTGTAGC+AGG | + | chr7_1:61933043-61933062 | None:intergenic | 35.0% |
| ACTATATGATCCATTCCGTA+AGG | - | chr7_1:61933066-61933085 | Msa1028750:intron | 35.0% | |
| CTATATGATCCATTCCGTAA+GGG | - | chr7_1:61933067-61933086 | Msa1028750:intron | 35.0% | |
| TATCTTGAATTCCTCTGTGT+TGG | + | chr7_1:61933208-61933227 | None:intergenic | 35.0% | |
| TTCTTTCTTCAAGCTGTCTA+TGG | + | chr7_1:61933479-61933498 | None:intergenic | 35.0% | |
| TAGACAGCTTGAAGAAAGAA+TGG | - | chr7_1:61933479-61933498 | Msa1028750:intron | 35.0% | |
| AGACAGCTTGAAGAAAGAAT+GGG | - | chr7_1:61933480-61933499 | Msa1028750:intron | 35.0% | |
| ! | AAGTTGTTCCTTCACTGATT+TGG | + | chr7_1:61933602-61933621 | None:intergenic | 35.0% |
| AAATCAGTGAAGGAACAACT+TGG | - | chr7_1:61933601-61933620 | Msa1028750:intron | 35.0% | |
| AATCAGTGAAGGAACAACTT+GGG | - | chr7_1:61933602-61933621 | Msa1028750:intron | 35.0% | |
| !! | GTTTAGATTGGTGATGTGTT+TGG | - | chr7_1:61933779-61933798 | Msa1028750:intron | 35.0% |
| TGTGTTTGGCAAAATCATTG+TGG | - | chr7_1:61933793-61933812 | Msa1028750:intron | 35.0% | |
| GTGTTTGGCAAAATCATTGT+GGG | - | chr7_1:61933794-61933813 | Msa1028750:intron | 35.0% | |
| TAAAGCTTCCGCAAAATTCA+CGG | + | chr7_1:61933821-61933840 | None:intergenic | 35.0% | |
| GGAAAGAACACAGAGATTGA+TGG | - | chr7_1:61931035-61931054 | Msa1028750:three_prime_UTR | 40.0% | |
| GTGAGAGAAAGTAATGATGG+CGG | + | chr7_1:61931186-61931205 | None:intergenic | 40.0% | |
| CATTCTTCTAGATCTCTTCC+TGG | - | chr7_1:61931266-61931285 | Msa1028750:three_prime_UTR | 40.0% | |
| GAAATTTGAGAGAGAGAGAG+AGG | + | chr7_1:61931310-61931329 | None:intergenic | 40.0% | |
| !! | GTTGACACACCTTTGATTTG+AGG | - | chr7_1:61931682-61931701 | Msa1028750:three_prime_UTR | 40.0% |
| GCACTAACACCTCAAATCAA+AGG | + | chr7_1:61931694-61931713 | None:intergenic | 40.0% | |
| ! | ATTTGAGGTGTTAGTGCTAG+AGG | - | chr7_1:61931697-61931716 | Msa1028750:three_prime_UTR | 40.0% |
| CACAATGTGCACGCAATTAA+GGG | + | chr7_1:61931784-61931803 | None:intergenic | 40.0% | |
| GTTGCAGTCTAGATTGTAGT+TGG | - | chr7_1:61931820-61931839 | Msa1028750:three_prime_UTR | 40.0% | |
| ! | GTACCTTGTGCTTTTCCTAT+TGG | - | chr7_1:61931997-61932016 | Msa1028750:three_prime_UTR | 40.0% |
| TCAAATGTTCACAGCAACAG+GGG | + | chr7_1:61932060-61932079 | None:intergenic | 40.0% | |
| GTCAAATGTTCACAGCAACA+GGG | + | chr7_1:61932061-61932080 | None:intergenic | 40.0% | |
| GCTGCTGAAAAATTGTCAAC+AGG | + | chr7_1:61932107-61932126 | None:intergenic | 40.0% | |
| GTGCAGAGAATATTGAAAGC+TGG | - | chr7_1:61932302-61932321 | Msa1028750:three_prime_UTR | 40.0% | |
| GACTATTATCAGGTGGAAAC+GGG | + | chr7_1:61932765-61932784 | None:intergenic | 40.0% | |
| ! | GAATTTGGAGTTCTTCCTTC+AGG | + | chr7_1:61932799-61932818 | None:intergenic | 40.0% |
| CACTAAATCCTTCGGGAATT+TGG | + | chr7_1:61932814-61932833 | None:intergenic | 40.0% | |
| ACATCTGCACTAAATCCTTC+GGG | + | chr7_1:61932821-61932840 | None:intergenic | 40.0% | |
| GACATCTGCACTAAATCCTT+CGG | + | chr7_1:61932822-61932841 | None:intergenic | 40.0% | |
| !! | AAACTCTGAAATTGAGCGAG+TGG | - | chr7_1:61932847-61932866 | Msa1028750:intron | 40.0% |
| ! | AAAGAAGAAAGGTGTAGCAG+GGG | + | chr7_1:61933041-61933060 | None:intergenic | 40.0% |
| GAACAAAATCTGCACCCTTA+CGG | + | chr7_1:61933084-61933103 | None:intergenic | 40.0% | |
| ACAGAGGAATTCAAGATACG+TGG | - | chr7_1:61933210-61933229 | Msa1028750:intron | 40.0% | |
| GCCTTTAACCGAGAATTAGT+TGG | - | chr7_1:61933289-61933308 | Msa1028750:intron | 40.0% | |
| GCCAACTAATTCTCGGTTAA+AGG | + | chr7_1:61933293-61933312 | None:intergenic | 40.0% | |
| GGGAAACTGTGGAAGATATA+TGG | - | chr7_1:61933362-61933381 | Msa1028750:intron | 40.0% | |
| ACTGTGGAAGATATATGGTG+TGG | - | chr7_1:61933367-61933386 | Msa1028750:intron | 40.0% | |
| AGCTTGAAGAAAGAATGGGA+AGG | - | chr7_1:61933484-61933503 | Msa1028750:intron | 40.0% | |
| GCTTGAAGAAAGAATGGGAA+GGG | - | chr7_1:61933485-61933504 | Msa1028750:intron | 40.0% | |
| CTTGAAGAAAGAATGGGAAG+GGG | - | chr7_1:61933486-61933505 | Msa1028750:intron | 40.0% | |
| ACTATTAGTTCACGAGCTTC+AGG | + | chr7_1:61933704-61933723 | None:intergenic | 40.0% | |
| GAAGCTCGTGAACTAATAGT+TGG | - | chr7_1:61933704-61933723 | Msa1028750:intron | 40.0% | |
| TCGTGAACTAATAGTTGGCA+TGG | - | chr7_1:61933709-61933728 | Msa1028750:intron | 40.0% | |
| AACTAATAGTTGGCATGGTC+TGG | - | chr7_1:61933714-61933733 | Msa1028750:intron | 40.0% | |
| ! | GAGTTGTTTCATCCTCCATT+AGG | - | chr7_1:61933736-61933755 | Msa1028750:intron | 40.0% |
| CATCCTCCATTAGGATTTGT+AGG | - | chr7_1:61933745-61933764 | Msa1028750:intron | 40.0% | |
| ACTCCTACAAATCCTAATGG+AGG | + | chr7_1:61933751-61933770 | None:intergenic | 40.0% | |
| CTCACTCCTACAAATCCTAA+TGG | + | chr7_1:61933754-61933773 | None:intergenic | 40.0% | |
| GAGTGAGTGCATGTTTAGAT+TGG | - | chr7_1:61933767-61933786 | Msa1028750:intron | 40.0% | |
| GAGTTTGAGAGAATCACAGT+GGG | + | chr7_1:61933872-61933891 | None:intergenic | 40.0% | |
| TGAGTTTGAGAGAATCACAG+TGG | + | chr7_1:61933873-61933892 | None:intergenic | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | + | chr7_1:61934166-61934185 | None:intergenic | 40.0% | |
| ATTAAGGACGGCTGAGTCAA+TGG | + | chr7_1:61931208-61931227 | None:intergenic | 45.0% | |
| GATGTCGGAGAGATTAAGGA+CGG | + | chr7_1:61931220-61931239 | None:intergenic | 45.0% | |
| ATCAGGGATGAGAGAGAGAT+CGG | + | chr7_1:61931244-61931263 | None:intergenic | 45.0% | |
| AGTGCTAGAGGTTGTGTACA+AGG | - | chr7_1:61931709-61931728 | Msa1028750:three_prime_UTR | 45.0% | |
| CCACAATGTGCACGCAATTA+AGG | + | chr7_1:61931785-61931804 | None:intergenic | 45.0% | |
| CCTTAATTGCGTGCACATTG+TGG | - | chr7_1:61931782-61931801 | Msa1028750:three_prime_UTR | 45.0% | |
| ! | AGCCCAATAGGAAAAGCACA+AGG | + | chr7_1:61932003-61932022 | None:intergenic | 45.0% |
| GGTCAAATGTTCACAGCAAC+AGG | + | chr7_1:61932062-61932081 | None:intergenic | 45.0% | |
| CCTGACAAGGCCAAATTCTA+TGG | + | chr7_1:61932129-61932148 | None:intergenic | 45.0% | |
| !! | CCATAGAATTTGGCCTTGTC+AGG | - | chr7_1:61932126-61932145 | Msa1028750:three_prime_UTR | 45.0% |
| GAACAGGGGTCACAATATGT+CGG | + | chr7_1:61932409-61932428 | None:intergenic | 45.0% | |
| ACTCACTGGTAGGAAGAACA+GGG | + | chr7_1:61932424-61932443 | None:intergenic | 45.0% | |
| AACTCACTGGTAGGAAGAAC+AGG | + | chr7_1:61932425-61932444 | None:intergenic | 45.0% | |
| ACGTTTGACTCCAACTCAAC+AGG | - | chr7_1:61932573-61932592 | Msa1028750:intron | 45.0% | |
| GAAGAACTCCAAATTCCCGA+AGG | - | chr7_1:61932803-61932822 | Msa1028750:intron | 45.0% | |
| ! | TCTGAAATTGAGCGAGTGGT+GGG | - | chr7_1:61932851-61932870 | Msa1028750:intron | 45.0% |
| AGAGAAGCGAATAGAAGTGG+AGG | + | chr7_1:61932879-61932898 | None:intergenic | 45.0% | |
| TCCACTTCTATTCGCTTCTC+TGG | - | chr7_1:61932878-61932897 | Msa1028750:intron | 45.0% | |
| ACCAGAGAAGCGAATAGAAG+TGG | + | chr7_1:61932882-61932901 | None:intergenic | 45.0% | |
| TGTTCCAGCAAAAGATGACG+CGG | - | chr7_1:61932970-61932989 | Msa1028750:intron | 45.0% | |
| AAATCTGCACCCTTACGGAA+TGG | + | chr7_1:61933079-61933098 | None:intergenic | 45.0% | |
| !! | AAGGGTGCAGATTTTGTTCG+CGG | - | chr7_1:61933085-61933104 | Msa1028750:intron | 45.0% |
| !! | GCAATGTTGATTCCACTCAC+TGG | + | chr7_1:61933271-61933290 | None:intergenic | 45.0% |
| ATGCTGGGCCAACTAATTCT+CGG | + | chr7_1:61933300-61933319 | None:intergenic | 45.0% | |
| AGAATTAGTTGGCCCAGCAT+TGG | - | chr7_1:61933300-61933319 | Msa1028750:intron | 45.0% | |
| ! | TAAGCCTCGGTGTGAAAAGT+GGG | - | chr7_1:61933419-61933438 | Msa1028750:intron | 45.0% |
| !! | AAAGTGGGTTGCCGTATGTT+TGG | - | chr7_1:61933434-61933453 | Msa1028750:intron | 45.0% |
| ATGGGAAGGGGTGAAATTGA+TGG | - | chr7_1:61933498-61933517 | Msa1028750:intron | 45.0% | |
| AGTGAAGGAACAACTTGGGA+AGG | - | chr7_1:61933606-61933625 | Msa1028750:intron | 45.0% | |
| TCAGCGGCTTTCGAAAACAT+AGG | + | chr7_1:61933637-61933656 | None:intergenic | 45.0% | |
| !! | GTTAAGCTCTGGAAGTCAGT+TGG | - | chr7_1:61933673-61933692 | Msa1028750:intron | 45.0% |
| ! | TTGTGGGACCGTGAATTTTG+CGG | - | chr7_1:61933810-61933829 | Msa1028750:intron | 45.0% |
| CAATAACCTGGGTGCATGTT+TGG | + | chr7_1:61933904-61933923 | None:intergenic | 45.0% | |
| AGCCATTAGGGCAATAACCT+GGG | + | chr7_1:61933915-61933934 | None:intergenic | 45.0% | |
| AAGCCATTAGGGCAATAACC+TGG | + | chr7_1:61933916-61933935 | None:intergenic | 45.0% | |
| GCGTGACTGAGTTAGATTGA+AGG | - | chr7_1:61934003-61934022 | Msa1028750:five_prime_UTR | 45.0% | |
| CGGAGATGTCGGAGAGATTA+AGG | + | chr7_1:61931224-61931243 | None:intergenic | 50.0% | |
| GAGAGAGAGATCGGAGATGT+CGG | + | chr7_1:61931235-61931254 | None:intergenic | 50.0% | |
| CTCACTGGTAGGAAGAACAG+GGG | + | chr7_1:61932423-61932442 | None:intergenic | 50.0% | |
| ! | AGGCGGCCAATCTAGACTTT+TGG | - | chr7_1:61932605-61932624 | Msa1028750:intron | 50.0% |
| AGTCAAAGATCCTGCCCTGA+AGG | - | chr7_1:61932781-61932800 | Msa1028750:CDS | 50.0% | |
| !! | CTCTGAAATTGAGCGAGTGG+TGG | - | chr7_1:61932850-61932869 | Msa1028750:intron | 50.0% |
| GTTCCAGCAAAAGATGACGC+GGG | - | chr7_1:61932971-61932990 | Msa1028750:intron | 50.0% | |
| TTCCAGCAAAAGATGACGCG+GGG | - | chr7_1:61932972-61932991 | Msa1028750:intron | 50.0% | |
| GGGGAATGTAGTAGATGCTG+TGG | - | chr7_1:61932991-61933010 | Msa1028750:intron | 50.0% | |
| TACCCATTTAGCCTCCGAAG+TGG | - | chr7_1:61933109-61933128 | Msa1028750:intron | 50.0% | |
| ACCCATTTAGCCTCCGAAGT+GGG | - | chr7_1:61933110-61933129 | Msa1028750:intron | 50.0% | |
| GAGCACAATCAACCCCACTT+CGG | + | chr7_1:61933126-61933145 | None:intergenic | 50.0% | |
| GTTGATTGTGCTCTGTCGTG+TGG | - | chr7_1:61933133-61933152 | Msa1028750:intron | 50.0% | |
| CAACATGGCTCTCGTAGGAA+CGG | + | chr7_1:61933248-61933267 | None:intergenic | 50.0% | |
| GATTCCACTCACTGGCAACA+TGG | + | chr7_1:61933263-61933282 | None:intergenic | 50.0% | |
| ! | ATTGGTCCCAGCTTTGGTGT+TGG | - | chr7_1:61933318-61933337 | Msa1028750:intron | 50.0% |
| AGGAGAAGGAAAGCTCAGGT+GGG | - | chr7_1:61933342-61933361 | Msa1028750:intron | 50.0% | |
| AAAGCTCAGGTGGGAAACTG+TGG | - | chr7_1:61933351-61933370 | Msa1028750:intron | 50.0% | |
| ! | TTTTCACACCGAGGCTTAGG+TGG | + | chr7_1:61933417-61933436 | None:intergenic | 50.0% |
| ! | CACTTTTCACACCGAGGCTT+AGG | + | chr7_1:61933420-61933439 | None:intergenic | 50.0% |
| ! | CTAAGCCTCGGTGTGAAAAG+TGG | - | chr7_1:61933418-61933437 | Msa1028750:intron | 50.0% |
| GGAAGGGGTGAAATTGATGG+AGG | - | chr7_1:61933501-61933520 | Msa1028750:intron | 50.0% | |
| CGAGATGGCCAAATCAGTGA+AGG | - | chr7_1:61933591-61933610 | Msa1028750:intron | 50.0% | |
| GTGAATCCAAACATGCACCC+AGG | - | chr7_1:61933895-61933914 | Msa1028750:CDS | 50.0% | |
| CACCCAGGTTATTGCCCTAA+TGG | - | chr7_1:61933910-61933929 | Msa1028750:CDS | 50.0% | |
| TTGCGTGCACATTGTGGCTG+CGG | - | chr7_1:61931788-61931807 | Msa1028750:three_prime_UTR | 55.0% | |
| TGGAGTTCTTCCTTCAGGGC+AGG | + | chr7_1:61932794-61932813 | None:intergenic | 55.0% | |
| ! | TTCCCCGCGTCATCTTTTGC+TGG | + | chr7_1:61932977-61932996 | None:intergenic | 55.0% |
| AAGGTGTAGCAGGGGTCTTG+AGG | + | chr7_1:61933033-61933052 | None:intergenic | 55.0% | |
| CCCCACTTCGGAGGCTAAAT+GGG | + | chr7_1:61933114-61933133 | None:intergenic | 55.0% | |
| CCCATTTAGCCTCCGAAGTG+GGG | - | chr7_1:61933111-61933130 | Msa1028750:intron | 55.0% | |
| ACCCCACTTCGGAGGCTAAA+TGG | + | chr7_1:61933115-61933134 | None:intergenic | 55.0% | |
| CACAATCAACCCCACTTCGG+AGG | + | chr7_1:61933123-61933142 | None:intergenic | 55.0% | |
| ! | GTGTGGACTGTGGCTCAATC+TGG | - | chr7_1:61933150-61933169 | Msa1028750:intron | 55.0% |
| AGACCTAGATGCGCCAACAC+AGG | - | chr7_1:61933174-61933193 | Msa1028750:intron | 55.0% | |
| !! | GTTGGCTTGAGAGCCTGTGT+TGG | + | chr7_1:61933190-61933209 | None:intergenic | 55.0% |
| AGGCTCTCAAGCCAACACAG+AGG | - | chr7_1:61933194-61933213 | Msa1028750:intron | 55.0% | |
| ACTGGCAACATGGCTCTCGT+AGG | + | chr7_1:61933253-61933272 | None:intergenic | 55.0% | |
| AGAGCCATGTTGCCAGTGAG+TGG | - | chr7_1:61933256-61933275 | Msa1028750:intron | 55.0% | |
| CCAAAGCTGGGACCAATGCT+GGG | + | chr7_1:61933315-61933334 | None:intergenic | 55.0% | |
| ACCAAAGCTGGGACCAATGC+TGG | + | chr7_1:61933316-61933335 | None:intergenic | 55.0% | |
| CTCCTGCCAACACCAAAGCT+GGG | + | chr7_1:61933327-61933346 | None:intergenic | 55.0% | |
| TCTCCTGCCAACACCAAAGC+TGG | + | chr7_1:61933328-61933347 | None:intergenic | 55.0% | |
| !! | GCTTTGGTGTTGGCAGGAGA+AGG | - | chr7_1:61933328-61933347 | Msa1028750:intron | 55.0% |
| TGGCAGGAGAAGGAAAGCTC+AGG | - | chr7_1:61933338-61933357 | Msa1028750:intron | 55.0% | |
| CAGGAGAAGGAAAGCTCAGG+TGG | - | chr7_1:61933341-61933360 | Msa1028750:intron | 55.0% | |
| GTATGCGACCACCTAAGCCT+CGG | - | chr7_1:61933406-61933425 | Msa1028750:intron | 55.0% | |
| !! | GCAACCCACTTTTCACACCG+AGG | + | chr7_1:61933426-61933445 | None:intergenic | 55.0% |
| TCTGGCGTCGTAGCTGATTG+TGG | + | chr7_1:61933559-61933578 | None:intergenic | 55.0% | |
| ACAATCAGCTACGACGCCAG+AGG | - | chr7_1:61933558-61933577 | Msa1028750:intron | 55.0% | |
| TTCGAAAGCCGCTGATGCCA+TGG | - | chr7_1:61933642-61933661 | Msa1028750:intron | 55.0% | |
| GAGCTTAACCCACTCTGCCA+TGG | + | chr7_1:61933662-61933681 | None:intergenic | 55.0% | |
| !! | TGGCAGAGTGGGTTAAGCTC+TGG | - | chr7_1:61933662-61933681 | Msa1028750:intron | 55.0% |
| ! | GTGCTCTGTCGTGTGGACTG+TGG | - | chr7_1:61933140-61933159 | Msa1028750:intron | 60.0% |
| ! | GAGCCTGTGTTGGCGCATCT+AGG | + | chr7_1:61933180-61933199 | None:intergenic | 60.0% |
| !! | CCCAGCATTGGTCCCAGCTT+TGG | - | chr7_1:61933312-61933331 | Msa1028750:intron | 60.0% |
| !! | GTCCCAGCTTTGGTGTTGGC+AGG | - | chr7_1:61933322-61933341 | Msa1028750:intron | 60.0% |
| ATCTCGACCACGCAGTCCTC+TGG | + | chr7_1:61933577-61933596 | None:intergenic | 60.0% | |
| AGAGGACTGCGTGGTCGAGA+TGG | - | chr7_1:61933576-61933595 | Msa1028750:intron | 60.0% | |
| CCACTCTGCCATGGCATCAG+CGG | + | chr7_1:61933653-61933672 | None:intergenic | 60.0% | |
| CGCTGATGCCATGGCAGAGT+GGG | - | chr7_1:61933651-61933670 | Msa1028750:intron | 60.0% | |
| TACGACGCCAGAGGACTGCG+TGG | - | chr7_1:61933567-61933586 | Msa1028750:intron | 65.0% | |
| CCGCTGATGCCATGGCAGAG+TGG | - | chr7_1:61933650-61933669 | Msa1028750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 61930932 | 61934186 | 61930932 | ID=Msa1028750;Name=Msa1028750 |
| chr7_1 | mRNA | 61930932 | 61934186 | 61930932 | ID=Msa1028750-mRNA-1;Parent=Msa1028750;Name=Msa1028750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=242|1|1|1|1|1|3|1637|87 |
| chr7_1 | exon | 61930932 | 61932588 | 61930932 | ID=Msa1028750-mRNA-1:exon:13095;Parent=Msa1028750-mRNA-1 |
| chr7_1 | exon | 61932681 | 61932810 | 61932681 | ID=Msa1028750-mRNA-1:exon:13094;Parent=Msa1028750-mRNA-1 |
| chr7_1 | exon | 61933831 | 61934186 | 61933831 | ID=Msa1028750-mRNA-1:exon:13093;Parent=Msa1028750-mRNA-1 |
| chr7_1 | five_prime_UTR | 61933945 | 61934186 | 61933945 | ID=Msa1028750-mRNA-1:five_prime_utr;Parent=Msa1028750-mRNA-1 |
| chr7_1 | CDS | 61933831 | 61933944 | 61933831 | ID=Msa1028750-mRNA-1:cds;Parent=Msa1028750-mRNA-1 |
| chr7_1 | CDS | 61932681 | 61932810 | 61932681 | ID=Msa1028750-mRNA-1:cds;Parent=Msa1028750-mRNA-1 |
| chr7_1 | CDS | 61932569 | 61932588 | 61932569 | ID=Msa1028750-mRNA-1:cds;Parent=Msa1028750-mRNA-1 |
| chr7_1 | three_prime_UTR | 61930932 | 61932568 | 61930932 | ID=Msa1028750-mRNA-1:three_prime_utr;Parent=Msa1028750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
