AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1068890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1068890 MtrunA17_Chr7g0250291 99.248 266 2 0 1 266 1 266 0.0 546
Msa1068890 MtrunA17_Chr8g0335681 79.699 266 50 2 1 266 1 262 3.66e-154 430
Msa1068890 MtrunA17_Chr4g0022101 60.684 234 89 2 32 264 1 232 1.22e-101 296
Msa1068890 MtrunA17_Chr3g0122601 59.504 242 97 1 25 265 20 261 1.42e-99 291
Msa1068890 MtrunA17_Chr7g0254541 54.430 237 107 1 29 264 81 317 1.12e-90 271
Msa1068890 MtrunA17_Chr0c29g0494021 100.000 91 0 0 176 266 1 91 2.04e-60 186
Msa1068890 MtrunA17_Chr0c29g0494041 98.305 59 1 0 1 59 1 59 1.35e-35 121
Msa1068890 MtrunA17_Chr0c29g0494031 100.000 38 0 0 90 127 5 42 1.67e-21 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1068890 AT2G44770.1 81.955 266 48 0 1 266 1 266 3.01e-166 461
Msa1068890 AT3G60260.2 79.699 266 54 0 1 266 1 266 1.22e-164 457
Msa1068890 AT3G60260.4 79.699 266 54 0 1 266 1 266 1.22e-164 457
Msa1068890 AT3G60260.1 79.699 266 54 0 1 266 1 266 1.22e-164 457
Msa1068890 AT3G60260.3 78.151 238 52 0 29 266 7 244 1.08e-143 403
Msa1068890 AT1G67400.1 56.349 252 105 2 15 265 34 281 1.98e-103 302
Msa1068890 AT1G03620.8 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.10 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.9 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.1 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.7 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.4 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.5 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.11 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.13 57.563 238 97 2 28 264 29 263 3.43e-99 291
Msa1068890 AT1G03620.3 58.974 234 92 3 32 264 1 231 6.62e-99 289
Msa1068890 AT1G03620.6 58.974 234 92 3 32 264 1 231 6.62e-99 289
Msa1068890 AT1G03620.2 58.974 234 92 3 32 264 1 231 6.62e-99 289
Msa1068890 AT1G03620.12 58.403 238 95 3 28 264 61 295 1.34e-98 291
Msa1068890 AT3G03610.1 56.485 239 103 1 29 266 85 323 3.34e-93 278
Msa1068890 AT3G03610.3 56.485 239 103 1 29 266 85 323 3.34e-93 278
Msa1068890 AT3G03610.2 56.485 239 103 1 29 266 85 323 3.34e-93 278
Msa1068890 AT3G03610.4 56.485 239 103 1 29 266 97 335 3.38e-93 278
Msa1068890 AT3G43400.1 60.993 141 51 1 97 237 71 207 5.89e-59 187

Find 115 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATCTAATAGGGTTTA+TGG 0.199304 7_2:+64269141 None:intergenic
AGGAATCCTTAAGGGCTTTA+TGG 0.211377 7_2:-64267110 Msa1068890:CDS
ATTTCGTTAATGTCCATTAA+TGG 0.214294 7_2:-64264256 Msa1068890:three_prime_UTR
GAGAAAAGAAAGAATCTAAT+AGG 0.219964 7_2:+64269133 None:intergenic
ACAGAACAAGATCGTAAAAT+TGG 0.286763 7_2:+64264037 None:intergenic
TTAACGGAAAAGAAAGAAAA+TGG 0.292481 7_2:+64269109 None:intergenic
TATACACGCTTCCTATCTTT+TGG 0.308112 7_2:-64264068 Msa1068890:three_prime_UTR
TTTCGTTAATGTCCATTAAT+GGG 0.319926 7_2:-64264255 Msa1068890:three_prime_UTR
CAAGACGAAGAATTGGAAAA+TGG 0.334305 7_2:-64268843 Msa1068890:exon
GAGTACCCATTTGCGGTTGC+TGG 0.375334 7_2:-64265811 Msa1068890:CDS
CTTGTTCTGTTCTATTCAAC+AGG 0.384182 7_2:-64264024 None:intergenic
CATCAATCAAGACGAAGAAT+TGG 0.385112 7_2:-64268850 Msa1068890:five_prime_UTR
CCTGTTGGAGGATGTATTGC+TGG 0.385839 7_2:-64264368 Msa1068890:three_prime_UTR
AGATCATACCGGAAAATTCC+TGG 0.390564 7_2:+64266864 None:intergenic
GGATTGCAGTATCATAATTC+AGG 0.399167 7_2:-64264225 Msa1068890:three_prime_UTR
ATCTACCTAAAATCTGTTGA+TGG 0.403619 7_2:+64267009 None:intergenic
AGCATTCCATAAAGCCCTTA+AGG 0.404955 7_2:+64267104 None:intergenic
TGGACATTAACGAAATATAT+AGG 0.406419 7_2:+64264263 None:intergenic
CTAGTTGTGTAAGGTCTTCA+AGG 0.412328 7_2:+64264600 None:intergenic
ACTTTCTTAAAATTCCTTGC+AGG 0.415890 7_2:-64265263 Msa1068890:intron
AAACAAAGAAAACGCCTTAA+CGG 0.416484 7_2:-64269241 Msa1068890:five_prime_UTR
TCACCACCACGACCGCGAAC+TGG 0.416741 7_2:+64268931 None:intergenic
TGTCCATTAATGGGAAAATA+CGG 0.419631 7_2:-64264246 Msa1068890:three_prime_UTR
TTAACACCAGCAACCGCAAA+TGG 0.419764 7_2:+64265805 None:intergenic
GAAGAGACTACCTGGTGCTC+AGG 0.420184 7_2:+64267322 None:intergenic
AAATGTAGGTTTGCTTTGCT+TGG 0.423318 7_2:-64264321 Msa1068890:three_prime_UTR
CCAACAAATATTACCTGGTA+TGG 0.428837 7_2:+64267747 None:intergenic
TCAGGCAGGTTTACTAAAGT+TGG 0.432978 7_2:-64264207 Msa1068890:three_prime_UTR
GAAATCTACACGCCGTCAGC+TGG 0.434732 7_2:-64264636 Msa1068890:CDS
AGAAAAGAAAGAATCTAATA+GGG 0.436025 7_2:+64269134 None:intergenic
TTCCATGCACGCGTCATACA+TGG 0.440337 7_2:-64264828 Msa1068890:CDS
TGGCGACAATACCAAAAGAT+AGG 0.444654 7_2:+64264057 None:intergenic
TTGCTGGCTGACATACAGTC+AGG 0.450369 7_2:-64264352 Msa1068890:three_prime_UTR
GATGATCTTAGGAATCCTTA+AGG 0.450878 7_2:-64267119 Msa1068890:intron
AAGCCATTGAGTTCTTCTTC+AGG 0.450943 7_2:+64267075 None:intergenic
ATGATCTTAGGAATCCTTAA+GGG 0.451275 7_2:-64267118 Msa1068890:intron
CATATCATTGGCAGGGGTGG+TGG 0.452395 7_2:-64266919 Msa1068890:intron
TCGTGTGAGAAGTTTGTATG+AGG 0.455180 7_2:+64264568 None:intergenic
GTGTGATATCATCAAGGGTC+TGG 0.458653 7_2:-64264412 Msa1068890:three_prime_UTR
AGGAAGAAACGGTTAGAAAG+TGG 0.463798 7_2:+64269037 None:intergenic
AGAAAGATCTGGAACAGGTT+GGG 0.475602 7_2:+64269061 None:intergenic
GTTACAGCTGAGTTTGTGAC+AGG 0.476804 7_2:-64267855 Msa1068890:intron
TAGAAAGTGGAAGAAAGATC+TGG 0.486762 7_2:+64269050 None:intergenic
GTACATCTTCTAGTTGTGTA+AGG 0.487362 7_2:+64264591 None:intergenic
TTTCCCGGGAAAGAAATTAA+CGG 0.491605 7_2:+64269093 None:intergenic
AACGCGTACCATTCATCTTC+CGG 0.493195 7_2:-64268761 Msa1068890:intron
GGGTGGTGGTTACATATCAT+TGG 0.494330 7_2:-64266905 Msa1068890:CDS
TGGAAAGACATGGGCTGGCA+AGG 0.494938 7_2:-64267039 Msa1068890:CDS
AGTTAAGATTTAAATCCTGT+TGG 0.496510 7_2:-64264383 Msa1068890:three_prime_UTR
TAAGATTTAAATCCTGTTGG+AGG 0.497097 7_2:-64264380 Msa1068890:three_prime_UTR
GTGGAAGAAAGATCTGGAAC+AGG 0.499036 7_2:+64269056 None:intergenic
AGCAGTGGAAAGACATGGGC+TGG 0.501356 7_2:-64267044 Msa1068890:CDS
TGCAGTATCATAATTCAGGC+AGG 0.504316 7_2:-64264221 Msa1068890:three_prime_UTR
TCAAGCTGATGGACAATCAA+TGG 0.510235 7_2:-64264853 Msa1068890:CDS
ACAGGATCAACGGCATGGAT+TGG 0.515977 7_2:-64267837 Msa1068890:CDS
CCAGCAATACATCCTCCAAC+AGG 0.516020 7_2:+64264368 None:intergenic
TTGCATAACATTCAAGCTGA+TGG 0.521212 7_2:-64264864 Msa1068890:CDS
ATCCATGTATGACGCGTGCA+TGG 0.526326 7_2:+64264826 None:intergenic
ATTGAATACCGGAAGATGAA+TGG 0.526710 7_2:+64268753 None:intergenic
AGACATGGGCTGGCAAGGGA+AGG 0.528180 7_2:-64267034 Msa1068890:CDS
TAGTTCTATCCCTGAGCACC+AGG 0.531050 7_2:-64267332 Msa1068890:intron
TTTCCGTTAATTTCTTTCCC+GGG 0.538148 7_2:-64269096 Msa1068890:five_prime_UTR
TTTCCTGAAGAAGAACTCAA+TGG 0.539229 7_2:-64267078 Msa1068890:CDS
TGTTAGTTAAATGTTGAAGT+GGG 0.539821 7_2:+64264461 None:intergenic
CAAATGCTAGATCTTGAAGC+AGG 0.539920 7_2:-64265763 Msa1068890:intron
GACAGTTAAGCCACGGACAC+TGG 0.542936 7_2:-64265294 Msa1068890:intron
TAACACCAGCAACCGCAAAT+GGG 0.546447 7_2:+64265806 None:intergenic
ATGTTAGTTAAATGTTGAAG+TGG 0.548053 7_2:+64264460 None:intergenic
GTCAGGGGAGTCTGAAATGT+AGG 0.554862 7_2:-64264335 Msa1068890:three_prime_UTR
AAGAAAGATCTGGAACAGGT+TGG 0.554968 7_2:+64269060 None:intergenic
AATTGGAAAATGGATGATAG+AGG 0.555587 7_2:-64268833 Msa1068890:exon
TCAACGGCATGGATTGGCCG+AGG 0.555638 7_2:-64267831 Msa1068890:CDS
AATAATAAAGTAATAAAATG+TGG 0.559523 7_2:-64269335 None:intergenic
AGTGTGGGAGTACCCATTTG+CGG 0.560410 7_2:-64265818 Msa1068890:CDS
CCTTCAAGTTAAAACTAGAC+TGG 0.566016 7_2:+64264524 None:intergenic
TGGTATACATGAAGGAGCGC+AGG 0.569758 7_2:-64269315 Msa1068890:five_prime_UTR
CACATACACAAGACAAACCT+CGG 0.571165 7_2:+64267814 None:intergenic
ATGGCTTGATTTCAGAGCAG+TGG 0.573093 7_2:-64267059 Msa1068890:CDS
GGAAAGACATGGGCTGGCAA+GGG 0.574077 7_2:-64267038 Msa1068890:CDS
ATAAAATGTGGTATACATGA+AGG 0.576158 7_2:-64269323 Msa1068890:five_prime_UTR
AGCCATGTGTGATATCATCA+AGG 0.579526 7_2:-64264418 Msa1068890:three_prime_UTR
AACAATAAAAGCTACCTGCA+AGG 0.580109 7_2:+64265249 None:intergenic
AAGAGACTACCTGGTGCTCA+GGG 0.585963 7_2:+64267323 None:intergenic
TCAGGGATAGAACTATCATA+TGG 0.590812 7_2:+64267340 None:intergenic
TTTCCAGTTCGCGGTCGTGG+TGG 0.593806 7_2:-64268934 Msa1068890:five_prime_UTR
TGAGTTTGTGACAGGATCAA+CGG 0.595004 7_2:-64267847 Msa1068890:CDS
TTCAGGAAGAATGCTTGCAG+AGG 0.599345 7_2:-64267384 Msa1068890:intron
GGAAGGAGTTCGTTCAGTGT+GGG 0.599733 7_2:-64265833 Msa1068890:CDS
AAATGTTGAAGTGGGAAGAG+CGG 0.600690 7_2:+64264469 None:intergenic
TTCAGAGCAGTGGAAAGACA+TGG 0.604712 7_2:-64267049 Msa1068890:CDS
TGATATCATCAAGGGTCTGG+AGG 0.605312 7_2:-64264409 Msa1068890:three_prime_UTR
TTGTGACAGGATCAACGGCA+TGG 0.606238 7_2:-64267842 Msa1068890:CDS
AGGAAGGAGTTCGTTCAGTG+TGG 0.607173 7_2:-64265834 Msa1068890:CDS
AGTTAAGCCACGGACACTGG+TGG 0.607277 7_2:-64265291 Msa1068890:CDS
TGCTGGCTGACATACAGTCA+GGG 0.616409 7_2:-64264351 Msa1068890:three_prime_UTR
AAATATGCAGTAAACGAACA+AGG 0.621068 7_2:+64264171 None:intergenic
ATATCACACATGGCTCACCT+TGG 0.623252 7_2:+64264426 None:intergenic
CGTGTGAGAAGTTTGTATGA+GGG 0.626967 7_2:+64264569 None:intergenic
GAAGTTCTTTCTCCAGCTGA+CGG 0.629691 7_2:+64264624 None:intergenic
TATGCAATAGAGAAGATCAA+AGG 0.629891 7_2:+64264880 None:intergenic
GTTAAGCCACGGACACTGGT+GGG 0.632248 7_2:-64265290 Msa1068890:CDS
TGGAAAATGGATGATAGAGG+TGG 0.635948 7_2:-64268830 Msa1068890:exon
ATTTCACAAGGTCTTGATCG+TGG 0.637712 7_2:-64268785 Msa1068890:CDS
GTGAATTGAAGCGAATGCGG+AGG 0.651025 7_2:+64269007 None:intergenic
AATGTGAATTGAAGCGAATG+CGG 0.651415 7_2:+64269004 None:intergenic
ACCCTTGATGATATCACACA+TGG 0.657299 7_2:+64264416 None:intergenic
TTTCCTTGACAGTTAAGCCA+CGG 0.658380 7_2:-64265301 Msa1068890:intron
TCAGAGCAGTGGAAAGACAT+GGG 0.661625 7_2:-64267048 Msa1068890:CDS
TCAAGTTAAAACTAGACTGG+CGG 0.673365 7_2:+64264527 None:intergenic
AATATGCAGTAAACGAACAA+GGG 0.678879 7_2:+64264172 None:intergenic
GCTGGCTGACATACAGTCAG+GGG 0.680531 7_2:-64264350 Msa1068890:three_prime_UTR
GCCATGTGTGATATCATCAA+GGG 0.683404 7_2:-64264417 Msa1068890:three_prime_UTR
ATGTCTGACAGAAAATGAGT+CGG 0.689115 7_2:-64264903 Msa1068890:intron
TAACATTTGAGCAAAGACCA+AGG 0.711307 7_2:-64264443 Msa1068890:three_prime_UTR
GCTGTTCGTAGAATTTCACA+AGG 0.713414 7_2:-64268797 Msa1068890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCATGTTTAATATATTAT+AGG - chr7_2:64266687-64266706 Msa1068890:intron 10.0%
!!! CATTTTTGTTTTTTTTTTTA+AGG - chr7_2:64267327-64267346 Msa1068890:intron 10.0%
!! AGAGTAAAAATTATAATAAA+AGG + chr7_2:64267624-64267643 None:intergenic 10.0%
!!! TAAATTGATAAAGTTTTGAT+TGG - chr7_2:64264746-64264765 Msa1068890:intron 15.0%
!!! AATGTTTTTCAATTGTATTT+CGG - chr7_2:64265749-64265768 Msa1068890:intron 15.0%
!! TGTTTAATATATTATAGGTT+TGG - chr7_2:64266692-64266711 Msa1068890:intron 15.0%
!!! TGTCTTTATTAATCTAATTT+TGG - chr7_2:64267389-64267408 Msa1068890:intron 15.0%
!!! AAATAAATTTTGATTTCTCT+TGG - chr7_2:64267864-64267883 Msa1068890:intron 15.0%
!! ATAGGAAAAAAAATATTGTA+AGG + chr7_2:64267931-64267950 None:intergenic 15.0%
!! AGAAAAGAAAGAATCTAATA+GGG + chr7_2:64264217-64264236 None:intergenic 20.0%
!! TGAATTAATTGAAGTAATCA+CGG - chr7_2:64265155-64265174 Msa1068890:intron 20.0%
!! AAAACTTGTATTAAGAAAGT+TGG - chr7_2:64265436-64265455 Msa1068890:intron 20.0%
!!! ATGTTTTTCAATTGTATTTC+GGG - chr7_2:64265750-64265769 Msa1068890:intron 20.0%
!! TAAGATGAACAAAGATAAAA+AGG + chr7_2:64265855-64265874 None:intergenic 20.0%
!!! ATTTTAGGTAGATAATATTC+TGG - chr7_2:64266349-64266368 Msa1068890:intron 20.0%
!! AGTGAAAATAAATTAGAATG+AGG + chr7_2:64266392-64266411 None:intergenic 20.0%
!! TTTCTATATATGCATATCAT+TGG - chr7_2:64266417-64266436 Msa1068890:intron 20.0%
!! AAAAATAAAACAGATCATAC+CGG + chr7_2:64266498-64266517 None:intergenic 20.0%
!! TATATTTCATCCAAAAGAAA+GGG - chr7_2:64266627-64266646 Msa1068890:intron 20.0%
!!! AATAAAATTTCCCTTTCTTT+TGG + chr7_2:64266640-64266659 None:intergenic 20.0%
!!! ATTTGTGTACTTTTATTTCA+CGG + chr7_2:64266983-64267002 None:intergenic 20.0%
!!! TTGCATATTTTCAGTTTTTT+GGG - chr7_2:64267189-64267208 Msa1068890:intron 20.0%
!! TAGATTAATAAAGACAATTC+AGG + chr7_2:64267385-64267404 None:intergenic 20.0%
!!! AAATAGATTTAAGGTTTGAA+CGG + chr7_2:64267435-64267454 None:intergenic 20.0%
!! TATTTAAAAACACAAATAGC+TGG + chr7_2:64267849-64267868 None:intergenic 20.0%
!! TCAAATTCAATTCATTACTT+GGG + chr7_2:64267999-64268018 None:intergenic 20.0%
!! ATCAAATTCAATTCATTACT+TGG + chr7_2:64268000-64268019 None:intergenic 20.0%
!!! AAGTTTGAAACTTAACAAAA+TGG - chr7_2:64268177-64268196 Msa1068890:intron 20.0%
!!! AGTTTGAAACTTAACAAAAT+GGG - chr7_2:64268178-64268197 Msa1068890:intron 20.0%
!! ATAAAATCACAACAACTTTA+TGG + chr7_2:64268230-64268249 None:intergenic 20.0%
!! TTTATCTACAAAATAAACTC+AGG + chr7_2:64268569-64268588 None:intergenic 20.0%
!!! TGAGTTTATTTTGTAGATAA+AGG - chr7_2:64268568-64268587 Msa1068890:intron 20.0%
!!! GAGTTTATTTTGTAGATAAA+GGG - chr7_2:64268569-64268588 Msa1068890:intron 20.0%
!!! AGATTAGATTTTAATGATTG+TGG - chr7_2:64269058-64269077 Msa1068890:five_prime_UTR 20.0%
! AAAGAATCTAATAGGGTTTA+TGG + chr7_2:64264210-64264229 None:intergenic 25.0%
! GAGAAAAGAAAGAATCTAAT+AGG + chr7_2:64264218-64264237 None:intergenic 25.0%
! TTAACGGAAAAGAAAGAAAA+TGG + chr7_2:64264242-64264261 None:intergenic 25.0%
! AAAAATCACGAGAAAATTGA+AGG + chr7_2:64264626-64264645 None:intergenic 25.0%
! AAGCTGTTTATTATGCTTAA+TGG - chr7_2:64264832-64264851 Msa1068890:CDS 25.0%
! TGATCTTAGTACAAAAATAG+TGG - chr7_2:64264954-64264973 Msa1068890:intron 25.0%
! GAATTAATTGAAGTAATCAC+GGG - chr7_2:64265156-64265175 Msa1068890:intron 25.0%
! ACAAATGTATTATGTGATGA+AGG - chr7_2:64265366-64265385 Msa1068890:intron 25.0%
! TATTAAGAAAGTTGGAAACT+CGG - chr7_2:64265444-64265463 Msa1068890:intron 25.0%
!!! ACAAATTATTTTGATCCCAT+AGG + chr7_2:64265882-64265901 None:intergenic 25.0%
!! TTTTTATGCATGATGATCTT+AGG - chr7_2:64266218-64266237 Msa1068890:intron 25.0%
!! CTGTGTTGTAATCAATATTT+TGG - chr7_2:64266530-64266549 Msa1068890:intron 25.0%
!! TCATACAACTCTAAAAAGTA+AGG + chr7_2:64266558-64266577 None:intergenic 25.0%
! TTGGATGAAATATACTAATG+TGG + chr7_2:64266621-64266640 None:intergenic 25.0%
! GTATATTTCATCCAAAAGAA+AGG - chr7_2:64266626-64266645 Msa1068890:intron 25.0%
!!! ATTTTATTTCTTAAACAGCC+TGG - chr7_2:64266652-64266671 Msa1068890:intron 25.0%
!!! TTTTATTTCTTAAACAGCCT+GGG - chr7_2:64266653-64266672 Msa1068890:intron 25.0%
!! TATTATAGGTTTGGAATCAA+TGG - chr7_2:64266701-64266720 Msa1068890:intron 25.0%
! AAGCAATAATTTATTCAGCA+AGG + chr7_2:64266816-64266835 None:intergenic 25.0%
! GCTGAATAAATTATTGCTTT+CGG - chr7_2:64266817-64266836 Msa1068890:intron 25.0%
! CTGAATAAATTATTGCTTTC+GGG - chr7_2:64266818-64266837 Msa1068890:intron 25.0%
! TCATCCATGATATAAGAATT+TGG - chr7_2:64266850-64266869 Msa1068890:intron 25.0%
! CATCCATGATATAAGAATTT+GGG - chr7_2:64266851-64266870 Msa1068890:intron 25.0%
! ACCAATAAAACATATCAATC+TGG + chr7_2:64266877-64266896 None:intergenic 25.0%
!!! TATTGGTTTATATTTGAGAC+AGG - chr7_2:64266890-64266909 Msa1068890:CDS 25.0%
!! ATTGGTTTATATTTGAGACA+GGG - chr7_2:64266891-64266910 Msa1068890:CDS 25.0%
! CAAAAAACTGAAAATATGCA+AGG + chr7_2:64267190-64267209 None:intergenic 25.0%
!! CTTGCATATTTTCAGTTTTT+TGG - chr7_2:64267188-64267207 Msa1068890:intron 25.0%
!! TGCATATTTTCAGTTTTTTG+GGG - chr7_2:64267190-64267209 Msa1068890:intron 25.0%
! AATGGTTGTCTATTCAATTT+GGG - chr7_2:64267245-64267264 Msa1068890:intron 25.0%
! ATAGTTATGTTTCAGACATA+TGG - chr7_2:64267269-64267288 Msa1068890:intron 25.0%
! GCAAAGTCAAAATAGATTTA+AGG + chr7_2:64267444-64267463 None:intergenic 25.0%
!!! AATCTTTTCAAGATCTTTTG+CGG - chr7_2:64267487-64267506 Msa1068890:intron 25.0%
! GTAAATGCTTATAAAGTTAC+AGG + chr7_2:64267770-64267789 None:intergenic 25.0%
! CAAATTCAATTCATTACTTG+GGG + chr7_2:64267998-64268017 None:intergenic 25.0%
!!! ACTCATTTTTTCCTACAATT+AGG - chr7_2:64268142-64268161 Msa1068890:intron 25.0%
!!! ATTTTTTCCTACAATTAGGA+AGG - chr7_2:64268146-64268165 Msa1068890:intron 25.0%
!!! TTTTTTCCTACAATTAGGAA+GGG - chr7_2:64268147-64268166 Msa1068890:intron 25.0%
!! AAGTTGTTGTGATTTTATGA+AGG - chr7_2:64268232-64268251 Msa1068890:intron 25.0%
!! TTTTATGAAGGCTTTTTGTA+AGG - chr7_2:64268244-64268263 Msa1068890:intron 25.0%
! TTACAAGAAACAAGAAATAG+TGG - chr7_2:64268371-64268390 Msa1068890:intron 25.0%
!!! TAGAAGTTTTTGAAGATTGT+TGG - chr7_2:64268630-64268649 Msa1068890:intron 25.0%
! TGTTAGTTAAATGTTGAAGT+GGG + chr7_2:64268890-64268909 None:intergenic 25.0%
! ATGTTAGTTAAATGTTGAAG+TGG + chr7_2:64268891-64268910 None:intergenic 25.0%
! AGTTAAGATTTAAATCCTGT+TGG - chr7_2:64268965-64268984 Msa1068890:five_prime_UTR 25.0%
! TGGACATTAACGAAATATAT+AGG + chr7_2:64269088-64269107 None:intergenic 25.0%
! ATTTCGTTAATGTCCATTAA+TGG - chr7_2:64269092-64269111 Msa1068890:five_prime_UTR 25.0%
! TTTCGTTAATGTCCATTAAT+GGG - chr7_2:64269093-64269112 Msa1068890:five_prime_UTR 25.0%
AAACAAAGAAAACGCCTTAA+CGG - chr7_2:64264107-64264126 Msa1068890:three_prime_UTR 30.0%
! GATTATTCATTTTGCCGTTA+AGG + chr7_2:64264124-64264143 None:intergenic 30.0%
! TTTTCCGTTAATTTCTTTCC+CGG - chr7_2:64264251-64264270 Msa1068890:three_prime_UTR 30.0%
AATTGGAAAATGGATGATAG+AGG - chr7_2:64264515-64264534 Msa1068890:three_prime_UTR 30.0%
TGAAGGAAAGAATTGAATAC+CGG + chr7_2:64264609-64264628 None:intergenic 30.0%
TTGAAAGGAATAAACGTTGA+AGG + chr7_2:64264663-64264682 None:intergenic 30.0%
!! CGCAATTTTGAAAAGTTGAA+AGG + chr7_2:64264678-64264697 None:intergenic 30.0%
GAGTACTTTATTATGTGATG+AGG - chr7_2:64264862-64264881 Msa1068890:CDS 30.0%
TTGTAAATAAAGCAAGCTAG+TGG - chr7_2:64264982-64265001 Msa1068890:intron 30.0%
! TCATTTTCTCGAATTGTTAC+CGG + chr7_2:64265138-64265157 None:intergenic 30.0%
TTAACTCTCTATTTCCTTCT+CGG + chr7_2:64265287-64265306 None:intergenic 30.0%
AATGTATTATGTGATGAAGG+TGG - chr7_2:64265369-64265388 Msa1068890:intron 30.0%
!!! TTTTGATTTAACTCCATACC+AGG - chr7_2:64265588-64265607 Msa1068890:intron 30.0%
! TCTCTTTTCATCTTTGTACA+TGG - chr7_2:64265679-64265698 Msa1068890:intron 30.0%
GATGAAAGCAATTGAACATT+CGG + chr7_2:64265792-64265811 None:intergenic 30.0%
! TTGTTCATCTTATTTGCCTA+TGG - chr7_2:64265863-64265882 Msa1068890:CDS 30.0%
! TGTTCATCTTATTTGCCTAT+GGG - chr7_2:64265864-64265883 Msa1068890:CDS 30.0%
! ATGCTGAATTTTCCATTTTC+AGG - chr7_2:64265947-64265966 Msa1068890:intron 30.0%
! TTTTAATAGAAGAGACTACC+TGG + chr7_2:64266037-64266056 None:intergenic 30.0%
ATGATCTTAGGAATCCTTAA+GGG - chr7_2:64266230-64266249 Msa1068890:intron 30.0%
ATCTACCTAAAATCTGTTGA+TGG + chr7_2:64266342-64266361 None:intergenic 30.0%
TATATATGCATATCATTGGC+AGG - chr7_2:64266421-64266440 Msa1068890:intron 30.0%
ATATATGCATATCATTGGCA+GGG - chr7_2:64266422-64266441 Msa1068890:intron 30.0%
TGATTACAACACAGAAAAGA+TGG + chr7_2:64266524-64266543 None:intergenic 30.0%
TGAAACAACAAAGACCATTT+GGG + chr7_2:64266744-64266763 None:intergenic 30.0%
ATGAAACAACAAAGACCATT+TGG + chr7_2:64266745-64266764 None:intergenic 30.0%
TTCATGCATGCTTAATTAGA+TGG - chr7_2:64266760-64266779 Msa1068890:intron 30.0%
! GCCAGATTGATATGTTTTAT+TGG - chr7_2:64266873-64266892 Msa1068890:CDS 30.0%
! TTGGTTTATATTTGAGACAG+GGG - chr7_2:64266892-64266911 Msa1068890:CDS 30.0%
AGAAAATCATGGAAGGAATT+GGG + chr7_2:64267024-64267043 None:intergenic 30.0%
TTTCAACAGAAAATCATGGA+AGG + chr7_2:64267031-64267050 None:intergenic 30.0%
! AAGAGGATACACCATATTTT+TGG + chr7_2:64267144-64267163 None:intergenic 30.0%
!! CATGTTGTGTTTGTTATGAA+TGG - chr7_2:64267227-64267246 Msa1068890:intron 30.0%
GAATGGTTGTCTATTCAATT+TGG - chr7_2:64267244-64267263 Msa1068890:intron 30.0%
ATGGTTGTCTATTCAATTTG+GGG - chr7_2:64267246-64267265 Msa1068890:intron 30.0%
AAAGACAATTCAGGAAAACA+GGG + chr7_2:64267376-64267395 None:intergenic 30.0%
TAAAGACAATTCAGGAAAAC+AGG + chr7_2:64267377-64267396 None:intergenic 30.0%
CAGCATATATCATGTCTAAA+AGG - chr7_2:64267644-64267663 Msa1068890:intron 30.0%
TCATGTCTAAAAGGATACAT+AGG - chr7_2:64267653-64267672 Msa1068890:intron 30.0%
CATGTCTAAAAGGATACATA+GGG - chr7_2:64267654-64267673 Msa1068890:intron 30.0%
ATGTCTAAAAGGATACATAG+GGG - chr7_2:64267655-64267674 Msa1068890:intron 30.0%
ATGCTTATAAAGTTACAGGT+GGG + chr7_2:64267766-64267785 None:intergenic 30.0%
AATGCTTATAAAGTTACAGG+TGG + chr7_2:64267767-64267786 None:intergenic 30.0%
AATAGCTGGTAATATTTGTG+AGG + chr7_2:64267835-64267854 None:intergenic 30.0%
TTTCTCTTGGTTTATCTAAC+AGG - chr7_2:64267877-64267896 Msa1068890:intron 30.0%
GTTGTTGACAAGTCAAATTT+GGG + chr7_2:64267909-64267928 None:intergenic 30.0%
TATGTCACATCAGAAAGAAT+AGG + chr7_2:64267949-64267968 None:intergenic 30.0%
ACTTTCTTAAAATTCCTTGC+AGG - chr7_2:64268085-64268104 Msa1068890:intron 30.0%
TAAGCGAAAAAAGATGAAAG+AGG + chr7_2:64268284-64268303 None:intergenic 30.0%
! GTTTTCTGATCTCATTTGAT+TGG - chr7_2:64268306-64268325 Msa1068890:intron 30.0%
TATGCAATAGAGAAGATCAA+AGG + chr7_2:64268471-64268490 None:intergenic 30.0%
TAAGATTTAAATCCTGTTGG+AGG - chr7_2:64268968-64268987 Msa1068890:five_prime_UTR 30.0%
TGTCCATTAATGGGAAAATA+CGG - chr7_2:64269102-64269121 Msa1068890:five_prime_UTR 30.0%
! AATCCGTATTTTCCCATTAA+TGG + chr7_2:64269108-64269127 None:intergenic 30.0%
AATATGCAGTAAACGAACAA+GGG + chr7_2:64269179-64269198 None:intergenic 30.0%
AAATATGCAGTAAACGAACA+AGG + chr7_2:64269180-64269199 None:intergenic 30.0%
ACAGAACAAGATCGTAAAAT+TGG + chr7_2:64269314-64269333 None:intergenic 30.0%
TTTCCGTTAATTTCTTTCCC+GGG - chr7_2:64264252-64264271 Msa1068890:three_prime_UTR 35.0%
TTTCCCGGGAAAGAAATTAA+CGG + chr7_2:64264258-64264277 None:intergenic 35.0%
TAGAAAGTGGAAGAAAGATC+TGG + chr7_2:64264301-64264320 None:intergenic 35.0%
GAGGAAAAAAGAGGAAGAAA+CGG + chr7_2:64264325-64264344 None:intergenic 35.0%
AATGTGAATTGAAGCGAATG+CGG + chr7_2:64264347-64264366 None:intergenic 35.0%
CATCAATCAAGACGAAGAAT+TGG - chr7_2:64264498-64264517 Msa1068890:three_prime_UTR 35.0%
CAAGACGAAGAATTGGAAAA+TGG - chr7_2:64264505-64264524 Msa1068890:three_prime_UTR 35.0%
ATTGAATACCGGAAGATGAA+TGG + chr7_2:64264598-64264617 None:intergenic 35.0%
AAAATCGACAAAATCACGAG+AGG + chr7_2:64264707-64264726 None:intergenic 35.0%
AGCATTCATGAAATGCGTAA+TGG - chr7_2:64264900-64264919 Msa1068890:intron 35.0%
AAGCAAGCTACTATATTCTG+TGG - chr7_2:64265037-64265056 Msa1068890:intron 35.0%
TAATTGAAGTAATCACGGGT+TGG - chr7_2:64265160-64265179 Msa1068890:intron 35.0%
ACACATGTCCTTGTCAAATA+CGG + chr7_2:64265216-64265235 None:intergenic 35.0%
TATTTGACAAGGACATGTGT+TGG - chr7_2:64265216-64265235 Msa1068890:intron 35.0%
! GTTCAGTTTCTTAAAGCACT+CGG + chr7_2:64265343-64265362 None:intergenic 35.0%
CCAACAAATATTACCTGGTA+TGG + chr7_2:64265604-64265623 None:intergenic 35.0%
CCATACCAGGTAATATTTGT+TGG - chr7_2:64265601-64265620 Msa1068890:intron 35.0%
TGATGCCAACAAATATTACC+TGG + chr7_2:64265609-64265628 None:intergenic 35.0%
TTTCACATGGTTGGGTTTAA+TGG - chr7_2:64265826-64265845 Msa1068890:CDS 35.0%
TCAGCATTGTGAATTTACTG+TGG + chr7_2:64265934-64265953 None:intergenic 35.0%
TCAGGGATAGAACTATCATA+TGG + chr7_2:64266011-64266030 None:intergenic 35.0%
CATGAAAAGCTCTATGTACA+TGG + chr7_2:64266134-64266153 None:intergenic 35.0%
GATGATCTTAGGAATCCTTA+AGG - chr7_2:64266229-64266248 Msa1068890:intron 35.0%
TTTCCTGAAGAAGAACTCAA+TGG - chr7_2:64266270-64266289 Msa1068890:intron 35.0%
! AGGATCCATCAACAGATTTT+AGG - chr7_2:64266334-64266353 Msa1068890:intron 35.0%
TATATGCATATCATTGGCAG+GGG - chr7_2:64266423-64266442 Msa1068890:intron 35.0%
!!! AGAATTTGCTGTTTTTTGCC+AGG - chr7_2:64266466-64266485 Msa1068890:intron 35.0%
!!! GTTTTTTGCCAGGAATTTTC+CGG - chr7_2:64266476-64266495 Msa1068890:intron 35.0%
! GTTACTTTGTTAACCTCTCT+AGG + chr7_2:64266599-64266618 None:intergenic 35.0%
ATGAAAATGTATACCTACCC+AGG + chr7_2:64266673-64266692 None:intergenic 35.0%
AAAGACCATTTGGGAAGAAA+TGG + chr7_2:64266735-64266754 None:intergenic 35.0%
! CTTAATTAGATGGTTGATGC+AGG - chr7_2:64266770-64266789 Msa1068890:intron 35.0%
TGGCCCAAATTCTTATATCA+TGG + chr7_2:64266857-64266876 None:intergenic 35.0%
!!! CAGGGGATTTTGAAATTGAT+TGG - chr7_2:64266909-64266928 Msa1068890:intron 35.0%
!! TGTACTTTTATTTCACGGCA+TGG + chr7_2:64266978-64266997 None:intergenic 35.0%
GAAAATCATGGAAGGAATTG+GGG + chr7_2:64267023-64267042 None:intergenic 35.0%
CAGAAAATCATGGAAGGAAT+TGG + chr7_2:64267025-64267044 None:intergenic 35.0%
! GGGTTTTCAACAGAAAATCA+TGG + chr7_2:64267035-64267054 None:intergenic 35.0%
CACAATGCTTAGACAAGTTT+GGG + chr7_2:64267055-64267074 None:intergenic 35.0%
GCGGGTAATTTCCAAAAATA+TGG - chr7_2:64267130-64267149 Msa1068890:intron 35.0%
TGAAAATATGCAAGGAAGCT+CGG + chr7_2:64267182-64267201 None:intergenic 35.0%
!!! CAGTTTTTTGGGGTTGAAAT+AGG - chr7_2:64267200-64267219 Msa1068890:intron 35.0%
TGCTTATAAAGTTACAGGTG+GGG + chr7_2:64267765-64267784 None:intergenic 35.0%
TTGACAAGTCAAATTTGGGA+CGG + chr7_2:64267905-64267924 None:intergenic 35.0%
GGTTGTTGACAAGTCAAATT+TGG + chr7_2:64267910-64267929 None:intergenic 35.0%
TTCAATTCATTACTTGGGGA+AGG + chr7_2:64267994-64268013 None:intergenic 35.0%
AACAATAAAAGCTACCTGCA+AGG + chr7_2:64268102-64268121 None:intergenic 35.0%
ATGTCTGACAGAAAATGAGT+CGG - chr7_2:64268445-64268464 Msa1068890:intron 35.0%
TTGCATAACATTCAAGCTGA+TGG - chr7_2:64268484-64268503 Msa1068890:intron 35.0%
! GTACATCTTCTAGTTGTGTA+AGG + chr7_2:64268760-64268779 None:intergenic 35.0%
TCAAGTTAAAACTAGACTGG+CGG + chr7_2:64268824-64268843 None:intergenic 35.0%
! CCTTCAAGTTAAAACTAGAC+TGG + chr7_2:64268827-64268846 None:intergenic 35.0%
!!! CCAGTCTAGTTTTAACTTGA+AGG - chr7_2:64268824-64268843 Msa1068890:CDS 35.0%
TAACATTTGAGCAAAGACCA+AGG - chr7_2:64268905-64268924 Msa1068890:five_prime_UTR 35.0%
! AAATGTAGGTTTGCTTTGCT+TGG - chr7_2:64269027-64269046 Msa1068890:five_prime_UTR 35.0%
GGATTGCAGTATCATAATTC+AGG - chr7_2:64269123-64269142 Msa1068890:five_prime_UTR 35.0%
! TATACACGCTTCCTATCTTT+TGG - chr7_2:64269280-64269299 Msa1068890:five_prime_UTR 35.0%
! TTGGGATTGTAGATTTTCCC+GGG + chr7_2:64264272-64264291 None:intergenic 40.0%
! GTTGGGATTGTAGATTTTCC+CGG + chr7_2:64264273-64264292 None:intergenic 40.0%
! AGAAAGATCTGGAACAGGTT+GGG + chr7_2:64264290-64264309 None:intergenic 40.0%
! AAGAAAGATCTGGAACAGGT+TGG + chr7_2:64264291-64264310 None:intergenic 40.0%
AGGAAGAAACGGTTAGAAAG+TGG + chr7_2:64264314-64264333 None:intergenic 40.0%
TGGAAAATGGATGATAGAGG+TGG - chr7_2:64264518-64264537 Msa1068890:three_prime_UTR 40.0%
GCTGTTCGTAGAATTTCACA+AGG - chr7_2:64264551-64264570 Msa1068890:exon 40.0%
ATTTCACAAGGTCTTGATCG+TGG - chr7_2:64264563-64264582 Msa1068890:exon 40.0%
TCAATCATAATGCTTGCCAC+TGG + chr7_2:64265013-64265032 None:intergenic 40.0%
ACACTTGTCCTTGTCAGATA+CGG + chr7_2:64265188-64265207 None:intergenic 40.0%
! ACACCTTCCATTAGAAGTGT+CGG - chr7_2:64265248-64265267 Msa1068890:intron 40.0%
CAATGAGTGTTAGCTCATTG+TGG - chr7_2:64265307-64265326 Msa1068890:intron 40.0%
TGAGTTTGTGACAGGATCAA+CGG - chr7_2:64265501-64265520 Msa1068890:intron 40.0%
CACATACACAAGACAAACCT+CGG + chr7_2:64265537-64265556 None:intergenic 40.0%
CAGCACTTCAACACTCTTAA+AGG - chr7_2:64265641-64265660 Msa1068890:intron 40.0%
GCAATTGAACATTCGGTTCA+CGG + chr7_2:64265785-64265804 None:intergenic 40.0%
CATGACACCAATGTTTCACA+TGG - chr7_2:64265813-64265832 Msa1068890:CDS 40.0%
ACACCAATGTTTCACATGGT+TGG - chr7_2:64265817-64265836 Msa1068890:CDS 40.0%
CACCAATGTTTCACATGGTT+GGG - chr7_2:64265818-64265837 Msa1068890:CDS 40.0%
AACCCAACCATGTGAAACAT+TGG + chr7_2:64265823-64265842 None:intergenic 40.0%
GCAAGCATTCTTCCTGAAAA+TGG + chr7_2:64265962-64265981 None:intergenic 40.0%
! ACATGGCTTGAAGTGTTTGA+TGG + chr7_2:64266117-64266136 None:intergenic 40.0%
GATATATACGTTTGCACGTG+TGG + chr7_2:64266174-64266193 None:intergenic 40.0%
AGGAATCCTTAAGGGCTTTA+TGG - chr7_2:64266238-64266257 Msa1068890:intron 40.0%
AGCATTCCATAAAGCCCTTA+AGG + chr7_2:64266247-64266266 None:intergenic 40.0%
AAGCCATTGAGTTCTTCTTC+AGG + chr7_2:64266276-64266295 None:intergenic 40.0%
AGATCATACCGGAAAATTCC+TGG + chr7_2:64266487-64266506 None:intergenic 40.0%
ATTTCTTAAACAGCCTGGGT+AGG - chr7_2:64266657-64266676 Msa1068890:intron 40.0%
GTCATCCATTTCTTCCCAAA+TGG - chr7_2:64266727-64266746 Msa1068890:intron 40.0%
CCACAATGCTTAGACAAGTT+TGG + chr7_2:64267056-64267075 None:intergenic 40.0%
! CCAAACTTGTCTAAGCATTG+TGG - chr7_2:64267053-64267072 Msa1068890:CDS 40.0%
TAAATGCTGAGATTCCTCAG+CGG - chr7_2:64267111-64267130 Msa1068890:CDS 40.0%
!! TTTTTGGAAATTACCCGCTG+AGG + chr7_2:64267128-64267147 None:intergenic 40.0%
GAAAATATGCAAGGAAGCTC+GGG + chr7_2:64267181-64267200 None:intergenic 40.0%
CAAATGCTAGATCTTGAAGC+AGG - chr7_2:64267585-64267604 Msa1068890:intron 40.0%
TCTAAAAGGATACATAGGGG+AGG - chr7_2:64267658-64267677 Msa1068890:intron 40.0%
! AGGGGAGGCATATATATGTA+CGG - chr7_2:64267673-64267692 Msa1068890:intron 40.0%
TTTGAAAGACCAGAACGTGT+TGG - chr7_2:64267714-64267733 Msa1068890:intron 40.0%
! TGGGGCTTATGTCATTTGAT+TGG + chr7_2:64267747-64267766 None:intergenic 40.0%
TTTCCTTGACAGTTAAGCCA+CGG - chr7_2:64268047-64268066 Msa1068890:intron 40.0%
CTGTTTCCCTTCCTAATTGT+AGG + chr7_2:64268156-64268175 None:intergenic 40.0%
CTACAATTAGGAAGGGAAAC+AGG - chr7_2:64268154-64268173 Msa1068890:intron 40.0%
! TCAAGCTGATGGACAATCAA+TGG - chr7_2:64268495-64268514 Msa1068890:intron 40.0%
CTAGTTGTGTAAGGTCTTCA+AGG + chr7_2:64268751-64268770 None:intergenic 40.0%
CGTGTGAGAAGTTTGTATGA+GGG + chr7_2:64268782-64268801 None:intergenic 40.0%
TCGTGTGAGAAGTTTGTATG+AGG + chr7_2:64268783-64268802 None:intergenic 40.0%
AAATGTTGAAGTGGGAAGAG+CGG + chr7_2:64268882-64268901 None:intergenic 40.0%
AGCCATGTGTGATATCATCA+AGG - chr7_2:64268930-64268949 Msa1068890:five_prime_UTR 40.0%
GCCATGTGTGATATCATCAA+GGG - chr7_2:64268931-64268950 Msa1068890:five_prime_UTR 40.0%
! ACCCTTGATGATATCACACA+TGG + chr7_2:64268935-64268954 None:intergenic 40.0%
TGCAGTATCATAATTCAGGC+AGG - chr7_2:64269127-64269146 Msa1068890:five_prime_UTR 40.0%
TCAGGCAGGTTTACTAAAGT+TGG - chr7_2:64269141-64269160 Msa1068890:five_prime_UTR 40.0%
TGGCGACAATACCAAAAGAT+AGG + chr7_2:64269294-64269313 None:intergenic 40.0%
! GTGGAAGAAAGATCTGGAAC+AGG + chr7_2:64264295-64264314 None:intergenic 45.0%
AACGCGTACCATTCATCTTC+CGG - chr7_2:64264587-64264606 Msa1068890:CDS 45.0%
TGTCAGTGCCGTATTTGACA+AGG - chr7_2:64265205-64265224 Msa1068890:intron 45.0%
! CTTCTAATGGAAGGTGTGTC+CGG + chr7_2:64265245-64265264 None:intergenic 45.0%
!! CACCTTCCATTAGAAGTGTC+GGG - chr7_2:64265249-64265268 Msa1068890:intron 45.0%
!! ACCTTCCATTAGAAGTGTCG+GGG - chr7_2:64265250-64265269 Msa1068890:intron 45.0%
AATAGCCCCGACACTTCTAA+TGG + chr7_2:64265258-64265277 None:intergenic 45.0%
GGGCTATTTAGTAACCGAGA+AGG - chr7_2:64265270-64265289 Msa1068890:CDS 45.0%
GTTACAGCTGAGTTTGTGAC+AGG - chr7_2:64265493-64265512 Msa1068890:intron 45.0%
TTCAGGAAGAATGCTTGCAG+AGG - chr7_2:64265964-64265983 Msa1068890:intron 45.0%
ATGGCTTGATTTCAGAGCAG+TGG - chr7_2:64266289-64266308 Msa1068890:intron 45.0%
TTCAGAGCAGTGGAAAGACA+TGG - chr7_2:64266299-64266318 Msa1068890:intron 45.0%
TCAGAGCAGTGGAAAGACAT+GGG - chr7_2:64266300-64266319 Msa1068890:intron 45.0%
! GGGTGGTGGTTACATATCAT+TGG - chr7_2:64266443-64266462 Msa1068890:intron 45.0%
AAATGCTGAGATTCCTCAGC+GGG - chr7_2:64267112-64267131 Msa1068890:intron 45.0%
GGGATAAGACTCGAACAAAG+AGG + chr7_2:64267161-64267180 None:intergenic 45.0%
GTTTGAACGGACAGTTCTTG+AGG + chr7_2:64267422-64267441 None:intergenic 45.0%
! TCAAGATCTTTTGCGGAAGC+AGG - chr7_2:64267494-64267513 Msa1068890:intron 45.0%
TAACACCAGCAACCGCAAAT+GGG + chr7_2:64267545-64267564 None:intergenic 45.0%
TTAACACCAGCAACCGCAAA+TGG + chr7_2:64267546-64267565 None:intergenic 45.0%
! GGGGAGGCATATATATGTAC+GGG - chr7_2:64267674-64267693 Msa1068890:intron 45.0%
! GGTTTAGAACCAACACGTTC+TGG + chr7_2:64267726-64267745 None:intergenic 45.0%
GAAGTTCTTTCTCCAGCTGA+CGG + chr7_2:64268727-64268746 None:intergenic 45.0%
ATATCACACATGGCTCACCT+TGG + chr7_2:64268925-64268944 None:intergenic 45.0%
GTGTGATATCATCAAGGGTC+TGG - chr7_2:64268936-64268955 Msa1068890:five_prime_UTR 45.0%
TGATATCATCAAGGGTCTGG+AGG - chr7_2:64268939-64268958 Msa1068890:five_prime_UTR 45.0%
! TGGTATACATGAAGGAGCGC+AGG - chr7_2:64264033-64264052 Msa1068890:three_prime_UTR 50.0%
GCGAATGCGGAGGAAAAAAG+AGG + chr7_2:64264334-64264353 None:intergenic 50.0%
GTGAATTGAAGCGAATGCGG+AGG + chr7_2:64264344-64264363 None:intergenic 50.0%
! CACTGCGATTTTCCAGTTCG+CGG - chr7_2:64264405-64264424 Msa1068890:three_prime_UTR 50.0%
CAAGCTAGTGGTGAATCCAG+TGG - chr7_2:64264994-64265013 Msa1068890:intron 50.0%
! GGTTGGTACCGTATCTGACA+AGG - chr7_2:64265177-64265196 Msa1068890:intron 50.0%
CAAGGACATGTGTTGGACAC+CGG - chr7_2:64265223-64265242 Msa1068890:intron 50.0%
TTGTGACAGGATCAACGGCA+TGG - chr7_2:64265506-64265525 Msa1068890:intron 50.0%
ACAGGATCAACGGCATGGAT+TGG - chr7_2:64265511-64265530 Msa1068890:intron 50.0%
! TAGTTCTATCCCTGAGCACC+AGG - chr7_2:64266016-64266035 Msa1068890:intron 50.0%
AAGAGACTACCTGGTGCTCA+GGG + chr7_2:64266028-64266047 None:intergenic 50.0%
ATGCATATCATTGGCAGGGG+TGG - chr7_2:64266426-64266445 Msa1068890:intron 50.0%
CCTCTCTAGGCACTCAAATG+AGG + chr7_2:64266586-64266605 None:intergenic 50.0%
CCTCATTTGAGTGCCTAGAG+AGG - chr7_2:64266583-64266602 Msa1068890:intron 50.0%
! GATCTTTTGCGGAAGCAGGA+AGG - chr7_2:64267498-64267517 Msa1068890:intron 50.0%
!! AGTGTGGGAGTACCCATTTG+CGG - chr7_2:64267530-64267549 Msa1068890:intron 50.0%
TGTCCGTGGCTTAACTGTCA+AGG + chr7_2:64268053-64268072 None:intergenic 50.0%
TTCCATGCACGCGTCATACA+TGG - chr7_2:64268520-64268539 Msa1068890:intron 50.0%
ATCCATGTATGACGCGTGCA+TGG + chr7_2:64268525-64268544 None:intergenic 50.0%
CCAGCAATACATCCTCCAAC+AGG + chr7_2:64268983-64269002 None:intergenic 50.0%
CCTGTTGGAGGATGTATTGC+TGG - chr7_2:64268980-64268999 Msa1068890:five_prime_UTR 50.0%
! TTGCTGGCTGACATACAGTC+AGG - chr7_2:64268996-64269015 Msa1068890:five_prime_UTR 50.0%
! TGCTGGCTGACATACAGTCA+GGG - chr7_2:64268997-64269016 Msa1068890:five_prime_UTR 50.0%
! GTCAGGGGAGTCTGAAATGT+AGG - chr7_2:64269013-64269032 Msa1068890:five_prime_UTR 50.0%
! GATTTTCCAGTTCGCGGTCG+TGG - chr7_2:64264411-64264430 Msa1068890:three_prime_UTR 55.0%
CACGACACTGACACACACAC+CGG - chr7_2:64265116-64265135 Msa1068890:intron 55.0%
GCCCCGACACTTCTAATGGA+AGG + chr7_2:64265254-64265273 None:intergenic 55.0%
GAAGAGACTACCTGGTGCTC+AGG + chr7_2:64266029-64266048 None:intergenic 55.0%
AGCAGTGGAAAGACATGGGC+TGG - chr7_2:64266304-64266323 Msa1068890:intron 55.0%
!! TGGAAAGACATGGGCTGGCA+AGG - chr7_2:64266309-64266328 Msa1068890:intron 55.0%
!! GGAAAGACATGGGCTGGCAA+GGG - chr7_2:64266310-64266329 Msa1068890:intron 55.0%
CATATCATTGGCAGGGGTGG+TGG - chr7_2:64266429-64266448 Msa1068890:intron 55.0%
GAGTACCCATTTGCGGTTGC+TGG - chr7_2:64267537-64267556 Msa1068890:intron 55.0%
GACAGTTAAGCCACGGACAC+TGG - chr7_2:64268054-64268073 Msa1068890:intron 55.0%
AGTTAAGCCACGGACACTGG+TGG - chr7_2:64268057-64268076 Msa1068890:intron 55.0%
GTTAAGCCACGGACACTGGT+GGG - chr7_2:64268058-64268077 Msa1068890:intron 55.0%
GAAATCTACACGCCGTCAGC+TGG - chr7_2:64268712-64268731 Msa1068890:intron 55.0%
GCTGGCTGACATACAGTCAG+GGG - chr7_2:64268998-64269017 Msa1068890:five_prime_UTR 55.0%
TTTCCAGTTCGCGGTCGTGG+TGG - chr7_2:64264414-64264433 Msa1068890:three_prime_UTR 60.0%
!! TCAACGGCATGGATTGGCCG+AGG - chr7_2:64265517-64265536 Msa1068890:intron 60.0%
!! AGACATGGGCTGGCAAGGGA+AGG - chr7_2:64266314-64266333 Msa1068890:intron 60.0%
TCACCACCACGACCGCGAAC+TGG + chr7_2:64264420-64264439 None:intergenic 65.0%
GTTGCTCCCACCAGTGTCCG+TGG + chr7_2:64268067-64268086 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 64264027 64269343 64264027 ID=Msa1068890;Name=Msa1068890
chr7_2 mRNA 64264027 64269343 64264027 ID=Msa1068890-mRNA-1;Parent=Msa1068890;Name=Msa1068890-mRNA-1;_AED=0.19;_eAED=0.19;_QI=497|1|1|1|1|1|9|538|266
chr7_2 exon 64264027 64264666 64264027 ID=Msa1068890-mRNA-1:exon:13344;Parent=Msa1068890-mRNA-1
chr7_2 exon 64264820 64264914 64264820 ID=Msa1068890-mRNA-1:exon:13343;Parent=Msa1068890-mRNA-1
chr7_2 exon 64265264 64265311 64265264 ID=Msa1068890-mRNA-1:exon:13342;Parent=Msa1068890-mRNA-1
chr7_2 exon 64265764 64265884 64265764 ID=Msa1068890-mRNA-1:exon:13341;Parent=Msa1068890-mRNA-1
chr7_2 exon 64266873 64266927 64266873 ID=Msa1068890-mRNA-1:exon:13340;Parent=Msa1068890-mRNA-1
chr7_2 exon 64267015 64267130 64267015 ID=Msa1068890-mRNA-1:exon:13339;Parent=Msa1068890-mRNA-1
chr7_2 exon 64267333 64267401 64267333 ID=Msa1068890-mRNA-1:exon:13338;Parent=Msa1068890-mRNA-1
chr7_2 exon 64267761 64267870 64267761 ID=Msa1068890-mRNA-1:exon:13337;Parent=Msa1068890-mRNA-1
chr7_2 exon 64268762 64269343 64268762 ID=Msa1068890-mRNA-1:exon:13336;Parent=Msa1068890-mRNA-1
chr7_2 five_prime_UTR 64268847 64269343 64268847 ID=Msa1068890-mRNA-1:five_prime_utr;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64268762 64268846 64268762 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64267761 64267870 64267761 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64267333 64267401 64267333 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64267015 64267130 64267015 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64266873 64266927 64266873 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64265764 64265884 64265764 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64265264 64265311 64265264 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64264820 64264914 64264820 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 CDS 64264565 64264666 64264565 ID=Msa1068890-mRNA-1:cds;Parent=Msa1068890-mRNA-1
chr7_2 three_prime_UTR 64264027 64264564 64264027 ID=Msa1068890-mRNA-1:three_prime_utr;Parent=Msa1068890-mRNA-1
Gene Sequence

>Msa1068890

ATGGATGATAGAGGTGGTTCTTTCGTCGCTGTTCGTAGAATTTCACAAGGTCTTGATCGTGGCAACGCGTACCATTCATCTTCCGCTGAGTTTGTGACAGGATCAACGGCATGGATTGGCCGAGGTTTGTCTTGTGTATGTGCACAGAGAAGAGAGAGCGATGCTCGACTCTCTTTTGATTTAACTCCATACCAGGAAGAATGCTTGCAGAGGCTTCAGAGTCGTATAGATGTTCCATATGATAGTTCTATCCCTGAGCACCAGGAATCCTTAAGGGCTTTATGGAATGCTGCATTTCCTGAAGAAGAACTCAATGGCTTGATTTCAGAGCAGTGGAAAGACATGGGCTGGCAAGGGAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTACATATCATTGGAGAATTTGCTGTTTTTTGCCAGGAATTTTCCGAAATCTTTTCAAGATCTTTTGCGGAAGCAGGAAGGAGTTCGTTCAGTGTGGGAGTACCCATTTGCGGTTGCTGGTGTTAACATTACATTCATGCTTATTCAAATGCTAGATCTTGAAGCAGTTAAGCCACGGACACTGGTGGGAGCAACTTTCTTAAAATTCCTTGCAGAAAATGAGTCGGCCTTTGATCTTCTCTATTGCATAACATTCAAGCTGATGGACAATCAATGGCTTTCCATGCACGCGTCATACATGGATTTTAATACAGTGATGAAATCTACACGCCGTCAGCTGGAGAAAGAACTTCTCCTTGAAGACCTTACACAACTAGAAGATGTACCCTCATACAAACTTCTCACACGATAG
Protein sequence

>Msa1068890

MDDRGGSFVAVRRISQGLDRGNAYHSSSAEFVTGSTAWIGRGLSCVCAQRRESDARLSFDLTPYQEECLQRLQSRIDVPYDSSIPEHQESLRALWNAAFPEEELNGLISEQWKDMGWQGKDPSTDFRGGGYISLENLLFFARNFPKSFQDLLRKQEGVRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDNQWLSMHASYMDFNTVMKSTRRQLEKELLLEDLTQLEDVPSYKLLTR*