Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799000 | XP_003611971.1 | 99.415 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 1.44e-122 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799000 | G7KC97 | 99.415 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 6.87e-123 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001680 | Msa0799000 | 0.847121 | 1.412785e-59 | -8.615850e-47 |
| Msa0002680 | Msa0799000 | 0.833364 | 5.565192e-56 | -8.615850e-47 |
| Msa0004540 | Msa0799000 | 0.844885 | 5.728079e-59 | -8.615850e-47 |
| Msa0005000 | Msa0799000 | -0.804274 | 2.336872e-49 | -8.615850e-47 |
| Msa0007970 | Msa0799000 | 0.807807 | 4.219730e-50 | -8.615850e-47 |
| Msa0012220 | Msa0799000 | 0.801882 | 7.300474e-49 | -8.615850e-47 |
| Msa0012940 | Msa0799000 | 0.849897 | 2.407877e-60 | -8.615850e-47 |
| Msa0022750 | Msa0799000 | -0.800749 | 1.245494e-48 | -8.615850e-47 |
| Msa0030280 | Msa0799000 | 0.804549 | 2.048397e-49 | -8.615850e-47 |
| Msa0031820 | Msa0799000 | 0.818662 | 1.743663e-52 | -8.615850e-47 |
| Msa0032020 | Msa0799000 | 0.804230 | 2.386769e-49 | -8.615850e-47 |
| Msa0032320 | Msa0799000 | 0.824993 | 5.971088e-54 | -8.615850e-47 |
| Msa0033880 | Msa0799000 | 0.836728 | 7.894977e-57 | -8.615850e-47 |
| Msa0035120 | Msa0799000 | 0.810468 | 1.135386e-50 | -8.615850e-47 |
| Msa0039250 | Msa0799000 | 0.837087 | 6.392292e-57 | -8.615850e-47 |
| Msa0041690 | Msa0799000 | 0.820864 | 5.476138e-53 | -8.615850e-47 |
| Msa0049780 | Msa0799000 | 0.822584 | 2.190669e-53 | -8.615850e-47 |
| Msa0052870 | Msa0799000 | 0.870971 | 9.748483e-67 | -8.615850e-47 |
| Msa0057590 | Msa0799000 | 0.800496 | 1.402827e-48 | -8.615850e-47 |
| Msa0057610 | Msa0799000 | 0.801996 | 6.918055e-49 | -8.615850e-47 |
| Msa0057710 | Msa0799000 | 0.806776 | 6.978321e-50 | -8.615850e-47 |
| Msa0069600 | Msa0799000 | 0.862365 | 5.335420e-64 | -8.615850e-47 |
| Msa0070430 | Msa0799000 | 0.817279 | 3.580309e-52 | -8.615850e-47 |
| Msa0077540 | Msa0799000 | 0.833864 | 4.174682e-56 | -8.615850e-47 |
| Msa0093850 | Msa0799000 | 0.864877 | 8.863969e-65 | -8.615850e-47 |
| Msa0097950 | Msa0799000 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
| Msa0098390 | Msa0799000 | -0.805507 | 1.291076e-49 | -8.615850e-47 |
| Msa0098470 | Msa0799000 | 0.844989 | 5.372026e-59 | -8.615850e-47 |
| Msa0101880 | Msa0799000 | 0.807735 | 4.371370e-50 | -8.615850e-47 |
| Msa0106320 | Msa0799000 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa0108390 | Msa0799000 | 0.823982 | 1.032918e-53 | -8.615850e-47 |
| Msa0115090 | Msa0799000 | 0.815676 | 8.183851e-52 | -8.615850e-47 |
| Msa0115370 | Msa0799000 | 0.820143 | 8.013547e-53 | -8.615850e-47 |
| Msa0116790 | Msa0799000 | 0.855981 | 4.378997e-62 | -8.615850e-47 |
| Msa0118000 | Msa0799000 | 0.811934 | 5.459923e-51 | -8.615850e-47 |
| Msa0610090 | Msa0799000 | 0.808806 | 2.583895e-50 | -8.615850e-47 |
| Msa0614930 | Msa0799000 | 0.821449 | 4.013347e-53 | -8.615850e-47 |
| Msa0615420 | Msa0799000 | 0.815568 | 8.650293e-52 | -8.615850e-47 |
| Msa0619180 | Msa0799000 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa0628420 | Msa0799000 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
| Msa0630940 | Msa0799000 | 0.819715 | 1.004060e-52 | -8.615850e-47 |
| Msa0633570 | Msa0799000 | 0.808377 | 3.190639e-50 | -8.615850e-47 |
| Msa0640500 | Msa0799000 | 0.824596 | 7.407649e-54 | -8.615850e-47 |
| Msa0644030 | Msa0799000 | 0.825951 | 3.543005e-54 | -8.615850e-47 |
| Msa0650830 | Msa0799000 | 0.811554 | 6.607022e-51 | -8.615850e-47 |
| Msa0658480 | Msa0799000 | 0.819324 | 1.232761e-52 | -8.615850e-47 |
| Msa0659550 | Msa0799000 | 0.806543 | 7.818246e-50 | -8.615850e-47 |
| Msa0662630 | Msa0799000 | 0.800008 | 1.762697e-48 | -8.615850e-47 |
| Msa0664760 | Msa0799000 | 0.807696 | 4.456208e-50 | -8.615850e-47 |
| Msa0669180 | Msa0799000 | 0.852839 | 3.547691e-61 | -8.615850e-47 |
| Msa0679100 | Msa0799000 | 0.836970 | 6.849111e-57 | -8.615850e-47 |
| Msa0692880 | Msa0799000 | 0.860144 | 2.535420e-63 | -8.615850e-47 |
| Msa0698640 | Msa0799000 | 0.807520 | 4.856802e-50 | -8.615850e-47 |
| Msa0702340 | Msa0799000 | 0.849491 | 3.125203e-60 | -8.615850e-47 |
| Msa0702590 | Msa0799000 | 0.851414 | 9.012856e-61 | -8.615850e-47 |
| Msa0702660 | Msa0799000 | 0.851644 | 7.762296e-61 | -8.615850e-47 |
| Msa0703680 | Msa0799000 | 0.821683 | 3.543782e-53 | -8.615850e-47 |
| Msa0706760 | Msa0799000 | 0.804495 | 2.102336e-49 | -8.615850e-47 |
| Msa0716410 | Msa0799000 | 0.915119 | 8.593052e-85 | -8.615850e-47 |
| Msa0716860 | Msa0799000 | 0.813832 | 2.096213e-51 | -8.615850e-47 |
| Msa0742510 | Msa0799000 | 0.810613 | 1.056662e-50 | -8.615850e-47 |
| Msa0744090 | Msa0799000 | 0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0744100 | Msa0799000 | 0.836669 | 8.174123e-57 | -8.615850e-47 |
| Msa0745200 | Msa0799000 | 0.802185 | 6.326077e-49 | -8.615850e-47 |
| Msa0747720 | Msa0799000 | -0.803199 | 3.907700e-49 | -8.615850e-47 |
| Msa0753770 | Msa0799000 | 0.800884 | 1.168574e-48 | -8.615850e-47 |
| Msa0756930 | Msa0799000 | 0.823356 | 1.447493e-53 | -8.615850e-47 |
| Msa0757800 | Msa0799000 | 0.829619 | 4.650556e-55 | -8.615850e-47 |
| Msa0765270 | Msa0799000 | 0.804154 | 2.474811e-49 | -8.615850e-47 |
| Msa0779550 | Msa0799000 | 0.812471 | 4.168884e-51 | -8.615850e-47 |
| Msa0788120 | Msa0799000 | 0.818075 | 2.368111e-52 | -8.615850e-47 |
| Msa0788770 | Msa0799000 | 0.836631 | 8.354157e-57 | -8.615850e-47 |
| Msa0789650 | Msa0799000 | 0.807538 | 4.814228e-50 | -8.615850e-47 |
| Msa0799000 | Msa0804250 | 0.802420 | 5.657741e-49 | -8.615850e-47 |
| Msa0799000 | Msa0815630 | 0.806081 | 9.782890e-50 | -8.615850e-47 |
| Msa0799000 | Msa0819540 | 0.836718 | 7.941816e-57 | -8.615850e-47 |
| Msa0799000 | Msa0825270 | 0.841194 | 5.509367e-58 | -8.615850e-47 |
| Msa0799000 | Msa0825280 | 0.825820 | 3.806038e-54 | -8.615850e-47 |
| Msa0799000 | Msa0826510 | 0.822594 | 2.178882e-53 | -8.615850e-47 |
| Msa0799000 | Msa0830390 | 0.806193 | 9.264967e-50 | -8.615850e-47 |
| Msa0799000 | Msa0836500 | 0.816597 | 5.095668e-52 | -8.615850e-47 |
| Msa0799000 | Msa0837410 | 0.882444 | 1.036887e-70 | -8.615850e-47 |
| Msa0799000 | Msa0851470 | 0.825356 | 4.901350e-54 | -8.615850e-47 |
| Msa0799000 | Msa0856050 | 0.818343 | 2.060183e-52 | -8.615850e-47 |
| Msa0799000 | Msa0864420 | 0.807614 | 4.637664e-50 | -8.615850e-47 |
| Msa0799000 | Msa0865570 | 0.825860 | 3.723113e-54 | -8.615850e-47 |
| Msa0799000 | Msa0865620 | 0.819788 | 9.662100e-53 | -8.615850e-47 |
| Msa0799000 | Msa0869010 | 0.804572 | 2.025549e-49 | -8.615850e-47 |
| Msa0799000 | Msa0879850 | 0.804059 | 2.590928e-49 | -8.615850e-47 |
| Msa0799000 | Msa0882750 | -0.810302 | 1.233333e-50 | -8.615850e-47 |
| Msa0799000 | Msa0888940 | 0.852287 | 5.096388e-61 | -8.615850e-47 |
| Msa0799000 | Msa0903780 | 0.807132 | 5.868452e-50 | -8.615850e-47 |
| Msa0799000 | Msa0928120 | 0.808379 | 3.188666e-50 | -8.615850e-47 |
| Msa0799000 | Msa0930780 | 0.802836 | 4.644191e-49 | -8.615850e-47 |
| Msa0799000 | Msa0943170 | 0.832588 | 8.677495e-56 | -8.615850e-47 |
| Msa0799000 | Msa0944660 | 0.813021 | 3.160149e-51 | -8.615850e-47 |
| Msa0799000 | Msa0947530 | -0.825961 | 3.523532e-54 | -8.615850e-47 |
| Msa0799000 | Msa0963020 | 0.815997 | 6.940052e-52 | -8.615850e-47 |
| Msa0799000 | Msa0980940 | 0.812502 | 4.104898e-51 | -8.615850e-47 |
| Msa0799000 | Msa0981430 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0799000 | Msa0990590 | 0.807766 | 4.306455e-50 | -8.615850e-47 |
| Msa0799000 | Msa1002590 | 0.837331 | 5.536215e-57 | -8.615850e-47 |
| Msa0799000 | Msa1004420 | 0.819009 | 1.454466e-52 | -8.615850e-47 |
| Msa0799000 | Msa1005820 | 0.816707 | 4.813592e-52 | -8.615850e-47 |
| Msa0799000 | Msa1027250 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
| Msa0799000 | Msa1027360 | 0.811430 | 7.027831e-51 | -8.615850e-47 |
| Msa0799000 | Msa1028350 | 0.822163 | 2.743235e-53 | -8.615850e-47 |
| Msa0799000 | Msa1040840 | 0.809552 | 1.788057e-50 | -8.615850e-47 |
| Msa0799000 | Msa1068890 | 0.804954 | 1.685501e-49 | -8.615850e-47 |
| Msa0799000 | Msa1069820 | 0.808525 | 2.967803e-50 | -8.615850e-47 |
| Msa0799000 | Msa1072600 | 0.811448 | 6.966132e-51 | -8.615850e-47 |
| Msa0799000 | Msa1076560 | 0.837313 | 5.594058e-57 | -8.615850e-47 |
| Msa0799000 | Msa1079230 | 0.802162 | 6.393334e-49 | -8.615850e-47 |
| Msa0799000 | Msa1083880 | 0.837423 | 5.245183e-57 | -8.615850e-47 |
| Msa0799000 | Msa1123350 | 0.819199 | 1.316777e-52 | -8.615850e-47 |
| Msa0799000 | Msa1127590 | 0.814020 | 1.905746e-51 | -8.615850e-47 |
| Msa0799000 | Msa1129690 | 0.801560 | 8.499340e-49 | -8.615850e-47 |
| Msa0799000 | Msa1145240 | 0.804324 | 2.281090e-49 | -8.615850e-47 |
| Msa0799000 | Msa1145740 | 0.823509 | 1.333492e-53 | -8.615850e-47 |
| Msa0799000 | Msa1154490 | 0.821247 | 4.469854e-53 | -8.615850e-47 |
| Msa0799000 | Msa1169040 | 0.809907 | 1.500511e-50 | -8.615850e-47 |
| Msa0799000 | Msa1169720 | 0.863763 | 1.973064e-64 | -8.615850e-47 |
| Msa0799000 | Msa1173900 | 0.804152 | 2.477464e-49 | -8.615850e-47 |
| Msa0799000 | Msa1174530 | 0.820128 | 8.077663e-53 | -8.615850e-47 |
| Msa0799000 | Msa1181170 | -0.811262 | 7.646374e-51 | -8.615850e-47 |
| Msa0799000 | Msa1186530 | 0.817783 | 2.756831e-52 | -8.615850e-47 |
| Msa0799000 | Msa1188560 | 0.811777 | 5.909128e-51 | -8.615850e-47 |
| Msa0799000 | Msa1198880 | 0.821519 | 3.866383e-53 | -8.615850e-47 |
| Msa0799000 | Msa1199290 | 0.817327 | 3.493065e-52 | -8.615850e-47 |
| Msa0799000 | Msa1201810 | 0.800208 | 1.605314e-48 | -8.615850e-47 |
| Msa0799000 | Msa1201830 | 0.826845 | 2.169329e-54 | -8.615850e-47 |
| Msa0799000 | Msa1202580 | 0.809393 | 1.934696e-50 | -8.615850e-47 |
| Msa0799000 | Msa1208890 | -0.811273 | 7.603196e-51 | -8.615850e-47 |
| Msa0799000 | Msa1214320 | 0.811739 | 6.022063e-51 | -8.615850e-47 |
| Msa0799000 | Msa1223330 | 0.854293 | 1.355189e-61 | -8.615850e-47 |
| Msa0799000 | Msa1224840 | 0.849127 | 3.946685e-60 | -8.615850e-47 |
| Msa0799000 | Msa1227640 | 0.815497 | 8.968740e-52 | -8.615850e-47 |
| Msa0799000 | Msa1235250 | 0.839642 | 1.402291e-57 | -8.615850e-47 |
| Msa0799000 | Msa1242640 | 0.820148 | 7.991752e-53 | -8.615850e-47 |
| Msa0799000 | Msa1253810 | 0.815680 | 8.167061e-52 | -8.615850e-47 |
| Msa0799000 | Msa1261070 | 0.803570 | 3.273009e-49 | -8.615850e-47 |
| Msa0799000 | Msa1262960 | 0.855044 | 8.212004e-62 | -8.615850e-47 |
| Msa0799000 | Msa1277080 | 0.813269 | 2.787831e-51 | -8.615850e-47 |
| Msa0799000 | Msa1277490 | 0.804745 | 1.864189e-49 | -8.615850e-47 |
| Msa0799000 | Msa1286500 | 0.802193 | 6.299708e-49 | -8.615850e-47 |
| Msa0799000 | Msa1294840 | 0.806107 | 9.660235e-50 | -8.615850e-47 |
| Msa0799000 | Msa1302060 | 0.862744 | 4.079621e-64 | -8.615850e-47 |
| Msa0799000 | Msa1304860 | 0.849772 | 2.609079e-60 | -8.615850e-47 |
| Msa0799000 | Msa1305280 | 0.807748 | 4.342846e-50 | -8.615850e-47 |
| Msa0799000 | Msa1329450 | 0.825510 | 4.507067e-54 | -8.615850e-47 |
| Msa0799000 | Msa1329790 | 0.805031 | 1.624291e-49 | -8.615850e-47 |
| Msa0799000 | Msa1333560 | 0.809608 | 1.739328e-50 | -8.615850e-47 |
| Msa0799000 | Msa1333890 | 0.804196 | 2.426294e-49 | -8.615850e-47 |
| Msa0799000 | Msa1333970 | 0.840097 | 1.067576e-57 | -8.615850e-47 |
| Msa0799000 | Msa1335160 | 0.819262 | 1.274009e-52 | -8.615850e-47 |
| Msa0799000 | Msa1338830 | 0.865925 | 4.146826e-65 | -8.615850e-47 |
| Msa0799000 | Msa1344310 | 0.812997 | 3.198556e-51 | -8.615850e-47 |
| Msa0799000 | Msa1360980 | 0.822123 | 2.802907e-53 | -8.615850e-47 |
| Msa0799000 | Msa1362420 | 0.801356 | 9.359293e-49 | -8.615850e-47 |
| Msa0799000 | Msa1365760 | 0.824103 | 9.675897e-54 | -8.615850e-47 |
| Msa0799000 | Msa1371520 | 0.890838 | 6.858997e-74 | -8.615850e-47 |
| Msa0799000 | Msa1373820 | 0.853940 | 1.714349e-61 | -8.615850e-47 |
| Msa0799000 | Msa1380970 | 0.825745 | 3.963394e-54 | -8.615850e-47 |
| Msa0799000 | Msa1386710 | 0.811535 | 6.670393e-51 | -8.615850e-47 |
| Msa0799000 | Msa1393820 | 0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa0799000 | Msa1398860 | 0.812870 | 3.410593e-51 | -8.615850e-47 |
| Msa0799000 | Msa1411950 | 0.836570 | 8.659072e-57 | -8.615850e-47 |
| Msa0799000 | Msa1418240 | 0.828706 | 7.743647e-55 | -8.615850e-47 |
| Msa0799000 | Msa1422910 | 0.816711 | 4.802999e-52 | -8.615850e-47 |
| Msa0799000 | Msa1432480 | 0.854275 | 1.372324e-61 | -8.615850e-47 |
| Msa0799000 | Msa1432920 | 0.864649 | 1.044596e-64 | -8.615850e-47 |
| Msa0799000 | Msa1434740 | 0.803519 | 3.353090e-49 | -8.615850e-47 |
| Msa0799000 | Msa1438050 | 0.835205 | 1.921148e-56 | -8.615850e-47 |
| Msa0799000 | Msa1443930 | 0.839423 | 1.598797e-57 | -8.615850e-47 |
| Msa0799000 | Msa1459460 | 0.828690 | 7.814555e-55 | -8.615850e-47 |
| Msa0799000 | Msa1459910 | 0.821696 | 3.519403e-53 | -8.615850e-47 |
| Msa0799000 | Msa1462910 | 0.808302 | 3.311247e-50 | -8.615850e-47 |
| Msa0123510 | Msa0799000 | 0.830457 | 2.905557e-55 | -8.615850e-47 |
| Msa0126770 | Msa0799000 | 0.821699 | 3.514686e-53 | -8.615850e-47 |
| Msa0127850 | Msa0799000 | 0.841439 | 4.747690e-58 | -8.615850e-47 |
| Msa0130110 | Msa0799000 | 0.844659 | 6.594111e-59 | -8.615850e-47 |
| Msa0130240 | Msa0799000 | 0.837264 | 5.760889e-57 | -8.615850e-47 |
| Msa0133720 | Msa0799000 | 0.831762 | 1.388996e-55 | -8.615850e-47 |
| Msa0133820 | Msa0799000 | 0.823497 | 1.341470e-53 | -8.615850e-47 |
| Msa0134000 | Msa0799000 | 0.841825 | 3.757140e-58 | -8.615850e-47 |
| Msa0138360 | Msa0799000 | 0.894804 | 1.747047e-75 | -8.615850e-47 |
| Msa0144360 | Msa0799000 | 0.830101 | 3.550571e-55 | -8.615850e-47 |
| Msa0147980 | Msa0799000 | 0.881493 | 2.293645e-70 | -8.615850e-47 |
| Msa0152870 | Msa0799000 | 0.829952 | 3.859603e-55 | -8.615850e-47 |
| Msa0154440 | Msa0799000 | 0.803439 | 3.484196e-49 | -8.615850e-47 |
| Msa0165270 | Msa0799000 | 0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0165440 | Msa0799000 | 0.820389 | 7.039447e-53 | -8.615850e-47 |
| Msa0166750 | Msa0799000 | 0.801600 | 8.340137e-49 | -8.615850e-47 |
| Msa0167480 | Msa0799000 | 0.800347 | 1.503964e-48 | -8.615850e-47 |
| Msa0168090 | Msa0799000 | 0.816313 | 5.897115e-52 | -8.615850e-47 |
| Msa0171850 | Msa0799000 | 0.842978 | 1.857856e-58 | -8.615850e-47 |
| Msa0173890 | Msa0799000 | 0.802458 | 5.557625e-49 | -8.615850e-47 |
| Msa0174000 | Msa0799000 | 0.838434 | 2.881948e-57 | -8.615850e-47 |
| Msa0181000 | Msa0799000 | 0.837457 | 5.139895e-57 | -8.615850e-47 |
| Msa0181230 | Msa0799000 | 0.833312 | 5.733111e-56 | -8.615850e-47 |
| Msa0187030 | Msa0799000 | 0.801343 | 9.415038e-49 | -8.615850e-47 |
| Msa0198530 | Msa0799000 | 0.800743 | 1.249168e-48 | -8.615850e-47 |
| Msa0207350 | Msa0799000 | 0.800933 | 1.142309e-48 | -8.615850e-47 |
| Msa0221480 | Msa0799000 | 0.843418 | 1.418513e-58 | -8.615850e-47 |
| Msa0226460 | Msa0799000 | 0.801344 | 9.410558e-49 | -8.615850e-47 |
| Msa0230150 | Msa0799000 | 0.832763 | 7.851594e-56 | -8.615850e-47 |
| Msa0230370 | Msa0799000 | 0.803863 | 2.846054e-49 | -8.615850e-47 |
| Msa0384670 | Msa0799000 | 0.836458 | 9.247219e-57 | -8.615850e-47 |
| Msa0392200 | Msa0799000 | 0.833090 | 6.509562e-56 | -8.615850e-47 |
| Msa0403660 | Msa0799000 | 0.814716 | 1.336939e-51 | -8.615850e-47 |
| Msa0405650 | Msa0799000 | 0.811241 | 7.726055e-51 | -8.615850e-47 |
| Msa0411410 | Msa0799000 | 0.812711 | 3.694674e-51 | -8.615850e-47 |
| Msa0423750 | Msa0799000 | 0.806615 | 7.546509e-50 | -8.615850e-47 |
| Msa0428240 | Msa0799000 | 0.808371 | 3.200901e-50 | -8.615850e-47 |
| Msa0431770 | Msa0799000 | 0.834722 | 2.542581e-56 | -8.615850e-47 |
| Msa0434570 | Msa0799000 | 0.843269 | 1.554150e-58 | -8.615850e-47 |
| Msa0434770 | Msa0799000 | 0.844832 | 5.919907e-59 | -8.615850e-47 |
| Msa0435370 | Msa0799000 | 0.835868 | 1.306322e-56 | -8.615850e-47 |
| Msa0435420 | Msa0799000 | 0.817825 | 2.697902e-52 | -8.615850e-47 |
| Msa0436200 | Msa0799000 | 0.816243 | 6.115215e-52 | -8.615850e-47 |
| Msa0447370 | Msa0799000 | 0.810502 | 1.116496e-50 | -8.615850e-47 |
| Msa0462880 | Msa0799000 | 0.815891 | 7.326383e-52 | -8.615850e-47 |
| Msa0474590 | Msa0799000 | 0.804952 | 1.687534e-49 | -8.615850e-47 |
| Msa0474700 | Msa0799000 | 0.802414 | 5.674668e-49 | -8.615850e-47 |
| Msa0478580 | Msa0799000 | 0.857827 | 1.251707e-62 | -8.615850e-47 |
| Msa0479200 | Msa0799000 | 0.849082 | 4.062929e-60 | -8.615850e-47 |
| Msa0241830 | Msa0799000 | 0.831200 | 1.910089e-55 | -8.615850e-47 |
| Msa0244380 | Msa0799000 | 0.821229 | 4.511894e-53 | -8.615850e-47 |
| Msa0249540 | Msa0799000 | 0.801370 | 9.298331e-49 | -8.615850e-47 |
| Msa0261160 | Msa0799000 | 0.825312 | 5.021499e-54 | -8.615850e-47 |
| Msa0261170 | Msa0799000 | 0.822337 | 2.499959e-53 | -8.615850e-47 |
| Msa0277420 | Msa0799000 | 0.806653 | 7.409166e-50 | -8.615850e-47 |
| Msa0277450 | Msa0799000 | 0.802639 | 5.098617e-49 | -8.615850e-47 |
| Msa0279850 | Msa0799000 | 0.822284 | 2.571650e-53 | -8.615850e-47 |
| Msa0296250 | Msa0799000 | 0.830116 | 3.520549e-55 | -8.615850e-47 |
| Msa0307570 | Msa0799000 | 0.869577 | 2.790038e-66 | -8.615850e-47 |
| Msa0321190 | Msa0799000 | 0.802619 | 5.148710e-49 | -8.615850e-47 |
| Msa0322900 | Msa0799000 | 0.832123 | 1.131050e-55 | -8.615850e-47 |
| Msa0341690 | Msa0799000 | 0.851613 | 7.916825e-61 | -8.615850e-47 |
| Msa0343190 | Msa0799000 | 0.814311 | 1.643744e-51 | -8.615850e-47 |
| Msa0346990 | Msa0799000 | 0.830217 | 3.326225e-55 | -8.615850e-47 |
| Msa0363810 | Msa0799000 | 0.815885 | 7.350121e-52 | -8.615850e-47 |
| Msa0484740 | Msa0799000 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
| Msa0485240 | Msa0799000 | 0.825828 | 3.787744e-54 | -8.615850e-47 |
| Msa0510290 | Msa0799000 | 0.811898 | 5.561615e-51 | -8.615850e-47 |
| Msa0511770 | Msa0799000 | 0.801538 | 8.587713e-49 | -8.615850e-47 |
| Msa0518030 | Msa0799000 | 0.876586 | 1.241431e-68 | -8.615850e-47 |
| Msa0519130 | Msa0799000 | 0.822562 | 2.216365e-53 | -8.615850e-47 |
| Msa0527190 | Msa0799000 | 0.883100 | 5.971134e-71 | -8.615850e-47 |
| Msa0531250 | Msa0799000 | 0.815228 | 1.029600e-51 | -8.615850e-47 |
| Msa0547990 | Msa0799000 | 0.839087 | 1.954447e-57 | -8.615850e-47 |
| Msa0556010 | Msa0799000 | 0.852421 | 4.669273e-61 | -8.615850e-47 |
| Msa0567260 | Msa0799000 | 0.813203 | 2.882015e-51 | -8.615850e-47 |
| Msa0573380 | Msa0799000 | 0.826713 | 2.332485e-54 | -8.615850e-47 |
| Msa0576680 | Msa0799000 | 0.803709 | 3.063393e-49 | -8.615850e-47 |
| Msa0578090 | Msa0799000 | 0.830284 | 3.202091e-55 | -8.615850e-47 |
| Msa0581690 | Msa0799000 | 0.885222 | 9.793816e-72 | -8.615850e-47 |
| Msa0583500 | Msa0799000 | 0.820896 | 5.381964e-53 | -8.615850e-47 |
| Msa0584550 | Msa0799000 | 0.825989 | 3.469185e-54 | -8.615850e-47 |
| Msa0586850 | Msa0799000 | 0.807868 | 4.096216e-50 | -8.615850e-47 |
| Msa0590640 | Msa0799000 | 0.831004 | 2.134561e-55 | -8.615850e-47 |
| Msa0593700 | Msa0799000 | 0.819167 | 1.338691e-52 | -8.615850e-47 |
| Msa0599900 | Msa0799000 | 0.807571 | 4.735769e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799000 | MtrunA17_Chr5g0403851 | 99.415 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 1.32e-126 | 352 |
| Msa0799000 | MtrunA17_Chr3g0141491 | 67.416 | 89 | 26 | 2 | 48 | 133 | 6 | 94 | 1.73e-34 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799000 | AT4G36660.1 | 70.588 | 170 | 40 | 2 | 1 | 160 | 1 | 170 | 1.12e-78 | 232 |
| Msa0799000 | AT5G65650.1 | 69.186 | 172 | 46 | 2 | 1 | 165 | 1 | 172 | 2.76e-76 | 226 |
| Msa0799000 | AT1G19380.1 | 54.622 | 119 | 53 | 1 | 30 | 147 | 25 | 143 | 6.15e-37 | 125 |
Find 72 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAAGGAAGGTACAAATTT+TGG | 0.077573 | 5_3:+12055028 | Msa0799000:CDS |
| ATACATAATCATCTTGCTTA+TGG | 0.256319 | 5_3:-12058759 | None:intergenic |
| TTCCTTTGTCAGCTTGCTTA+AGG | 0.283386 | 5_3:-12058608 | None:intergenic |
| GGATCAGGTTGCCGAGGTTT+TGG | 0.290545 | 5_3:+12055354 | Msa0799000:CDS |
| AACATGGATTCAGGTTTGTT+TGG | 0.307707 | 5_3:+12055006 | Msa0799000:CDS |
| ACTTGTGCATTTAGCATAGT+TGG | 0.349621 | 5_3:-12058896 | None:intergenic |
| ACCGTTTCTCTTCGTTGGTC+TGG | 0.356252 | 5_3:+12055099 | Msa0799000:CDS |
| GACGGCGGCGATTAACAAAA+AGG | 0.382742 | 5_3:+12054981 | Msa0799000:CDS |
| AACTGACTATATGTTCTTGT+AGG | 0.392162 | 5_3:+12058868 | Msa0799000:three_prime_UTR |
| CTGGTACCGTTTCTCTTCGT+TGG | 0.412184 | 5_3:+12055094 | Msa0799000:CDS |
| AATGGAGGAGAGGGAGAAAG+TGG | 0.421490 | 5_3:+12055295 | Msa0799000:CDS |
| CGATCTGATTGTGTAAATGA+AGG | 0.432492 | 5_3:-12054762 | None:intergenic |
| GATTCAGGTTTGTTTGGAAA+AGG | 0.446023 | 5_3:+12055012 | Msa0799000:CDS |
| TCAAGGGTCTGGCTTGTGCT+TGG | 0.446945 | 5_3:+12058672 | Msa0799000:three_prime_UTR |
| ACATCGAGATCGTCGTGAAT+CGG | 0.453320 | 5_3:-12055156 | None:intergenic |
| AGAAAGTGGTGAGGCATATG+TGG | 0.462069 | 5_3:+12055309 | Msa0799000:CDS |
| AGTATCGAGGTCACTGGATA+AGG | 0.465982 | 5_3:-12055133 | None:intergenic |
| ATTATTGTAGATTATTAGAT+CGG | 0.476671 | 5_3:+12054927 | Msa0799000:five_prime_UTR |
| AAGGAAAACTAACCGTGGAT+TGG | 0.488593 | 5_3:-12055499 | None:intergenic |
| TATTATTATTATTGTTGTTG+TGG | 0.498710 | 5_3:-12054820 | None:intergenic |
| ACACCAACAGCCGTAGGATC+AGG | 0.511562 | 5_3:+12055339 | Msa0799000:CDS |
| ATAAATCAATAACGCGGTGC+CGG | 0.513005 | 5_3:+12054713 | Msa0799000:five_prime_UTR |
| TTAATCGCCGCCGTCGTCGT+TGG | 0.517902 | 5_3:-12054973 | None:intergenic |
| TCTAGGAGCAGTCAAGGGTC+TGG | 0.518590 | 5_3:+12058661 | Msa0799000:three_prime_UTR |
| GACCACTCTAGGAGCAGTCA+AGG | 0.524656 | 5_3:+12058655 | Msa0799000:three_prime_UTR |
| CAGGTTTGTTTGGAAAAGGA+AGG | 0.533040 | 5_3:+12055016 | Msa0799000:CDS |
| GATTATTAGATCGGAAATGA+AGG | 0.534187 | 5_3:+12054936 | Msa0799000:exon |
| CAACCTGATCCTACGGCTGT+TGG | 0.537984 | 5_3:-12055342 | None:intergenic |
| GGAAGCATGAAAATCTGAGT+AGG | 0.538740 | 5_3:-12058738 | None:intergenic |
| GCGTGCTTAAAGACCACTCT+AGG | 0.544127 | 5_3:+12058644 | Msa0799000:exon |
| CTTCATTTACACAATCAGAT+CGG | 0.547440 | 5_3:+12054763 | Msa0799000:five_prime_UTR |
| CGGAAATGAAGGATGACGAT+GGG | 0.550371 | 5_3:+12054947 | Msa0799000:exon |
| ACCAGACCAACGAAGAGAAA+CGG | 0.550644 | 5_3:-12055100 | None:intergenic |
| GAAAGTGGTGAGGCATATGT+GGG | 0.551973 | 5_3:+12055310 | Msa0799000:CDS |
| ACCCTTGACTGCTCCTAGAG+TGG | 0.554244 | 5_3:-12058657 | None:intergenic |
| ACCGTGGATTGGATAGGAGG+TGG | 0.560306 | 5_3:-12055488 | None:intergenic |
| TGTTGTGGTAGATGAACAAC+GGG | 0.561636 | 5_3:-12054805 | None:intergenic |
| CTAACCGTGGATTGGATAGG+AGG | 0.562418 | 5_3:-12055491 | None:intergenic |
| AAACTAACCGTGGATTGGAT+AGG | 0.566662 | 5_3:-12055494 | None:intergenic |
| AATCAATAACGCGGTGCCGG+TGG | 0.566971 | 5_3:+12054716 | Msa0799000:five_prime_UTR |
| TGTGTAGGAAATGGAGGAGA+GGG | 0.567688 | 5_3:+12055286 | Msa0799000:intron |
| AATCGGAGTATCGAGGTCAC+TGG | 0.567901 | 5_3:-12055139 | None:intergenic |
| TTTGTGTGTGTAGGAAATGG+AGG | 0.573209 | 5_3:+12055280 | Msa0799000:intron |
| ACCTCGGCAACCTGATCCTA+CGG | 0.573548 | 5_3:-12055349 | None:intergenic |
| GAAGCATGAAAATCTGAGTA+GGG | 0.578574 | 5_3:-12058737 | None:intergenic |
| AGCCTTAAGCAAGCTGACAA+AGG | 0.595487 | 5_3:+12058606 | Msa0799000:CDS |
| GAATTGACAAGTGATGTTCC+TGG | 0.596743 | 5_3:+12055404 | Msa0799000:CDS |
| CATCATATTTCAGAGAGCAC+AGG | 0.597960 | 5_3:+12058572 | Msa0799000:intron |
| GCTGTGATGCAAAATGAAGA+TGG | 0.601135 | 5_3:-12054667 | None:intergenic |
| AGGAGAGGGAGAAAGTGGTG+AGG | 0.601765 | 5_3:+12055300 | Msa0799000:CDS |
| TGGGCTTCCAACGACGACGG+CGG | 0.609391 | 5_3:+12054966 | Msa0799000:CDS |
| AGAAACGGTACCAGTAAACA+TGG | 0.615388 | 5_3:-12055085 | None:intergenic |
| GCCGTAGGATCAGGTTGCCG+AGG | 0.615991 | 5_3:+12055348 | Msa0799000:CDS |
| AAAGCCTCTTGCCAAAACCT+CGG | 0.619602 | 5_3:-12055365 | None:intergenic |
| AAATGAAGATGGTGAAATGA+CGG | 0.622155 | 5_3:-12054656 | None:intergenic |
| GTATAAATTGAATTTATGTG+TGG | 0.628850 | 5_3:+12058970 | Msa0799000:three_prime_UTR |
| CGATGGGCTTCCAACGACGA+CGG | 0.632047 | 5_3:+12054963 | Msa0799000:CDS |
| TCCACCTCCTATCCAATCCA+CGG | 0.641814 | 5_3:+12055487 | Msa0799000:CDS |
| TCGGAAATGAAGGATGACGA+TGG | 0.646801 | 5_3:+12054946 | Msa0799000:exon |
| ACCACTCTAGGAGCAGTCAA+GGG | 0.647727 | 5_3:+12058656 | Msa0799000:three_prime_UTR |
| AAAAGATTGCGAAGAAACAG+TGG | 0.656108 | 5_3:+12058705 | Msa0799000:three_prime_UTR |
| GTGTGTAGGAAATGGAGGAG+AGG | 0.656261 | 5_3:+12055285 | Msa0799000:intron |
| GATTGCGAAGAAACAGTGGT+GGG | 0.658478 | 5_3:+12058709 | Msa0799000:three_prime_UTR |
| AGATTGCGAAGAAACAGTGG+TGG | 0.662809 | 5_3:+12058708 | Msa0799000:three_prime_UTR |
| AATTTGTACGACAACAAACG+TGG | 0.674259 | 5_3:-12058844 | None:intergenic |
| CGTCGTGAATCGGAGTATCG+AGG | 0.677291 | 5_3:-12055146 | None:intergenic |
| ATAGCATCATCTCTAACACC+AGG | 0.678366 | 5_3:-12055422 | None:intergenic |
| TTGTTGTGGTAGATGAACAA+CGG | 0.682741 | 5_3:-12054806 | None:intergenic |
| ATGTGTACACCAACAGCCGT+AGG | 0.683663 | 5_3:+12055333 | Msa0799000:CDS |
| ATGTGAATGTGAGACACCAC+CGG | 0.707275 | 5_3:-12054732 | None:intergenic |
| ACAAAGGAAAAGAAGCGATG+CGG | 0.741207 | 5_3:+12058622 | Msa0799000:CDS |
| ATAATAATAAATCAATAACG+CGG | 0.770001 | 5_3:+12054707 | Msa0799000:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTATTTTTAATAAA+GGG | - | chr5_3:12057708-12057727 | None:intergenic | 0.0% |
| !!! | TTTATTTTTATTTTTAATAA+AGG | - | chr5_3:12057709-12057728 | None:intergenic | 0.0% |
| !!! | ATTATATTTTAATTATTATT+TGG | + | chr5_3:12058926-12058945 | Msa0799000:three_prime_UTR | 0.0% |
| !! | TAAATATTTAAGTAATATCT+TGG | - | chr5_3:12055245-12055264 | None:intergenic | 10.0% |
| !! | ATAAATCTTTATATGTTTAT+AGG | - | chr5_3:12056141-12056160 | None:intergenic | 10.0% |
| !! | ATAATAATAAATCAATAACG+CGG | + | chr5_3:12054707-12054726 | Msa0799000:five_prime_UTR | 15.0% |
| !!! | TATTATTATTATTGTTGTTG+TGG | - | chr5_3:12054823-12054842 | None:intergenic | 15.0% |
| !! | ATTATTGTAGATTATTAGAT+CGG | + | chr5_3:12054927-12054946 | Msa0799000:five_prime_UTR | 15.0% |
| !! | TTAAATATGAATGAGATTAA+AGG | - | chr5_3:12055200-12055219 | None:intergenic | 15.0% |
| !!! | TTTACAATTTGTATGTTTTT+TGG | + | chr5_3:12056500-12056519 | Msa0799000:intron | 15.0% |
| !!! | AGATGATTATGTATTTTAAT+AGG | + | chr5_3:12058768-12058787 | Msa0799000:three_prime_UTR | 15.0% |
| !!! | TTGGTAAACAAATATTTTAT+TGG | + | chr5_3:12058945-12058964 | Msa0799000:three_prime_UTR | 15.0% |
| !!! | TGGTAAACAAATATTTTATT+GGG | + | chr5_3:12058946-12058965 | Msa0799000:three_prime_UTR | 15.0% |
| !!! | ACTCATTGTTAATTTGTTAT+TGG | + | chr5_3:12055592-12055611 | Msa0799000:intron | 20.0% |
| !! | ATAATATTGCACAAGAAATT+TGG | + | chr5_3:12055646-12055665 | Msa0799000:intron | 20.0% |
| !! | TAACAAAAGATAAAATAAGG+TGG | - | chr5_3:12055880-12055899 | None:intergenic | 20.0% |
| !! | AGCTAACAAAAGATAAAATA+AGG | - | chr5_3:12055883-12055902 | None:intergenic | 20.0% |
| !!! | TTTTTAAATGTTGTTTCGTT+TGG | + | chr5_3:12056101-12056120 | Msa0799000:intron | 20.0% |
| !! | TATATGTTTATAGGTGTTTA+TGG | - | chr5_3:12056132-12056151 | None:intergenic | 20.0% |
| !! | TGTAAGTAAATAGACAAAAA+AGG | - | chr5_3:12056782-12056801 | None:intergenic | 20.0% |
| !! | GATATTGTTAGTTAGATAAA+AGG | + | chr5_3:12056991-12057010 | Msa0799000:intron | 20.0% |
| !!! | TTCATATTTGATAGTTTAAC+TGG | + | chr5_3:12057030-12057049 | Msa0799000:intron | 20.0% |
| !!! | AAAAAATCAATTTTAGATGG+AGG | - | chr5_3:12057588-12057607 | None:intergenic | 20.0% |
| !!! | CACAAAAAATCAATTTTAGA+TGG | - | chr5_3:12057591-12057610 | None:intergenic | 20.0% |
| !!! | TGTTTATGTCAATGATTTTA+AGG | + | chr5_3:12057639-12057658 | Msa0799000:intron | 20.0% |
| !!! | GTTTATGTCAATGATTTTAA+GGG | + | chr5_3:12057640-12057659 | Msa0799000:intron | 20.0% |
| !! | TAAAATGAATGTTTGAATAG+AGG | - | chr5_3:12058009-12058028 | None:intergenic | 20.0% |
| !!! | ATCATTTTGGAAACATTTTA+AGG | + | chr5_3:12058088-12058107 | Msa0799000:intron | 20.0% |
| !!! | TCATTTTGGAAACATTTTAA+GGG | + | chr5_3:12058089-12058108 | Msa0799000:intron | 20.0% |
| !! | TAATCTAAATTAACTGAGAA+TGG | - | chr5_3:12058234-12058253 | None:intergenic | 20.0% |
| !!! | ACATTTCTTTTTTGACAAAA+AGG | - | chr5_3:12058330-12058349 | None:intergenic | 20.0% |
| !!! | TTTTGTCAAAAAAGAAATGT+AGG | + | chr5_3:12058330-12058349 | Msa0799000:intron | 20.0% |
| !! | TCATACTAGAGTATATATTA+TGG | + | chr5_3:12058533-12058552 | Msa0799000:intron | 20.0% |
| !!! | TTATGTATTTTAATAGGTTG+TGG | + | chr5_3:12058774-12058793 | Msa0799000:three_prime_UTR | 20.0% |
| !! | GTATAAATTGAATTTATGTG+TGG | + | chr5_3:12058970-12058989 | Msa0799000:three_prime_UTR | 20.0% |
| ! | GATTAACAAAAAGGAAAACA+TGG | + | chr5_3:12054990-12055009 | Msa0799000:CDS | 25.0% |
| !!! | AAAAGGAAGGTACAAATTTT+GGG | + | chr5_3:12055029-12055048 | Msa0799000:CDS | 25.0% |
| ! | TGAATGAGATTAAAGGAAAA+TGG | - | chr5_3:12055193-12055212 | None:intergenic | 25.0% |
| !! | TTCATCATTTCAAGTAAGTA+TGG | - | chr5_3:12055565-12055584 | None:intergenic | 25.0% |
| !!! | TTGTTAATTTGTTATTGGTC+TGG | + | chr5_3:12055597-12055616 | Msa0799000:intron | 25.0% |
| !!! | TTTTTTGTCAAGTCTTTTTG+TGG | - | chr5_3:12055988-12056007 | None:intergenic | 25.0% |
| ! | CAGACTAATTTCAACTAATA+CGG | - | chr5_3:12056072-12056091 | None:intergenic | 25.0% |
| !!! | TCTTGTTGATTGGTTTTATT+TGG | + | chr5_3:12056236-12056255 | Msa0799000:intron | 25.0% |
| ! | TATGTTTGCAATTTGCAAAT+GGG | + | chr5_3:12056288-12056307 | Msa0799000:intron | 25.0% |
| !! | CATTATTTAAAGCATTTCCT+GGG | + | chr5_3:12056340-12056359 | Msa0799000:intron | 25.0% |
| !!! | TCTTTGTTGTTTGCATAATA+CGG | + | chr5_3:12056545-12056564 | Msa0799000:intron | 25.0% |
| ! | TGAAATCAGTTTACATTACA+AGG | + | chr5_3:12056579-12056598 | Msa0799000:intron | 25.0% |
| !! | ATTCAACTTTAAAAGTGATG+TGG | - | chr5_3:12056722-12056741 | None:intergenic | 25.0% |
| !!! | CATCACTTTTAAAGTTGAAT+TGG | + | chr5_3:12056722-12056741 | Msa0799000:intron | 25.0% |
| ! | CAATTACATGGTAGAAATAA+TGG | + | chr5_3:12056856-12056875 | Msa0799000:intron | 25.0% |
| !! | TCCAATTTGCATAAACTTTT+AGG | + | chr5_3:12056901-12056920 | Msa0799000:intron | 25.0% |
| ! | TCCTAAAAGTTTATGCAAAT+TGG | - | chr5_3:12056905-12056924 | None:intergenic | 25.0% |
| ! | TTAAGTGAACAAGAATTAGA+AGG | + | chr5_3:12057153-12057172 | Msa0799000:intron | 25.0% |
| !! | CTTAAAAGTATAGTTAGAGA+GGG | - | chr5_3:12057218-12057237 | None:intergenic | 25.0% |
| !!! | TAAAAGTTGAGCCTTTTTTA+GGG | - | chr5_3:12057522-12057541 | None:intergenic | 25.0% |
| !!! | AATGATTTTAAGGGACAATA+TGG | + | chr5_3:12057649-12057668 | Msa0799000:intron | 25.0% |
| ! | AAGTTTAGAAACTATTCTCA+AGG | - | chr5_3:12057842-12057861 | None:intergenic | 25.0% |
| ! | TTGAGAATAGTTTCTAAACT+TGG | + | chr5_3:12057841-12057860 | Msa0799000:intron | 25.0% |
| !! | TAAACTTGGCATTTTTGTAT+TGG | + | chr5_3:12057855-12057874 | Msa0799000:intron | 25.0% |
| !!! | TGTTTAGTTTTGTTTTCCAA+GGG | - | chr5_3:12057949-12057968 | None:intergenic | 25.0% |
| !!! | ATGTTTAGTTTTGTTTTCCA+AGG | - | chr5_3:12057950-12057969 | None:intergenic | 25.0% |
| ! | AAAGTAGAAAGAGATGTTAT+TGG | + | chr5_3:12058123-12058142 | Msa0799000:intron | 25.0% |
| ! | GAAAGACTAATTAAAACAAC+AGG | - | chr5_3:12058202-12058221 | None:intergenic | 25.0% |
| ! | TTCTAAGCTCAATTATTTGA+AGG | + | chr5_3:12058399-12058418 | Msa0799000:intron | 25.0% |
| ! | TCTAAGCTCAATTATTTGAA+GGG | + | chr5_3:12058400-12058419 | Msa0799000:intron | 25.0% |
| ! | ATACATAATCATCTTGCTTA+TGG | - | chr5_3:12058762-12058781 | None:intergenic | 25.0% |
| AAATGAAGATGGTGAAATGA+CGG | - | chr5_3:12054659-12054678 | None:intergenic | 30.0% | |
| CTTCATTTACACAATCAGAT+CGG | + | chr5_3:12054763-12054782 | Msa0799000:five_prime_UTR | 30.0% | |
| GATTATTAGATCGGAAATGA+AGG | + | chr5_3:12054936-12054955 | Msa0799000:exon | 30.0% | |
| AAAAAGGAAAACATGGATTC+AGG | + | chr5_3:12054997-12055016 | Msa0799000:CDS | 30.0% | |
| !! | GAAAAGGAAGGTACAAATTT+TGG | + | chr5_3:12055028-12055047 | Msa0799000:CDS | 30.0% |
| ! | TAGATGTAATTTGTGTGTGT+AGG | + | chr5_3:12055271-12055290 | Msa0799000:intron | 30.0% |
| ! | TAATTTGTGTGTGTAGGAAA+TGG | + | chr5_3:12055277-12055296 | Msa0799000:intron | 30.0% |
| ATATTGCTGATCAAACTCAA+TGG | + | chr5_3:12055716-12055735 | Msa0799000:intron | 30.0% | |
| TACGAAAATAAGCTGAAAAC+AGG | - | chr5_3:12055833-12055852 | None:intergenic | 30.0% | |
| GGAGAAATTTAACTCATGTT+TGG | - | chr5_3:12055967-12055986 | None:intergenic | 30.0% | |
| !!! | GATTGGTTTTATTTGGAATG+TGG | + | chr5_3:12056243-12056262 | Msa0799000:intron | 30.0% |
| CTATGTTTGCAATTTGCAAA+TGG | + | chr5_3:12056287-12056306 | Msa0799000:intron | 30.0% | |
| ATGTTTGCAATTTGCAAATG+GGG | + | chr5_3:12056289-12056308 | Msa0799000:intron | 30.0% | |
| ! | GCATTATTTAAAGCATTTCC+TGG | + | chr5_3:12056339-12056358 | Msa0799000:intron | 30.0% |
| AATTGTAAACCAACGAATCT+CGG | - | chr5_3:12056489-12056508 | None:intergenic | 30.0% | |
| !!! | GAGATCTTGTTTTCTTTGAA+AGG | + | chr5_3:12056679-12056698 | Msa0799000:intron | 30.0% |
| AAAAACTTATAAGTGCGTGT+AGG | - | chr5_3:12056758-12056777 | None:intergenic | 30.0% | |
| TGTCTATTTACTTACACTGT+TGG | + | chr5_3:12056786-12056805 | Msa0799000:intron | 30.0% | |
| !! | TGCATAAACTTTTAGGAAGA+TGG | + | chr5_3:12056908-12056927 | Msa0799000:intron | 30.0% |
| ATATGAAGAACATTGCAACA+GGG | - | chr5_3:12057017-12057036 | None:intergenic | 30.0% | |
| AATATGAAGAACATTGCAAC+AGG | - | chr5_3:12057018-12057037 | None:intergenic | 30.0% | |
| TCTTCTTTCCTTGAATCTTT+GGG | - | chr5_3:12057078-12057097 | None:intergenic | 30.0% | |
| TTCTTCTTTCCTTGAATCTT+TGG | - | chr5_3:12057079-12057098 | None:intergenic | 30.0% | |
| TAGCATCTTGGATCAATTAA+AGG | - | chr5_3:12057118-12057137 | None:intergenic | 30.0% | |
| TTAATTGATCCAAGATGCTA+AGG | + | chr5_3:12057118-12057137 | Msa0799000:intron | 30.0% | |
| GAATTTCCTGTACTAAATAG+AGG | - | chr5_3:12057182-12057201 | None:intergenic | 30.0% | |
| ! | CCTTAAAAGTATAGTTAGAG+AGG | - | chr5_3:12057219-12057238 | None:intergenic | 30.0% |
| ! | CCTCTCTAACTATACTTTTA+AGG | + | chr5_3:12057216-12057235 | Msa0799000:intron | 30.0% |
| TAATTGGTGAAGATCCATTA+TGG | + | chr5_3:12057462-12057481 | Msa0799000:intron | 30.0% | |
| ! | AGAAAATACAGGTTCTAGTT+TGG | + | chr5_3:12057495-12057514 | Msa0799000:intron | 30.0% |
| !!! | CTAAAAGTTGAGCCTTTTTT+AGG | - | chr5_3:12057523-12057542 | None:intergenic | 30.0% |
| ! | ATCAATTTTAGATGGAGGTT+GGG | - | chr5_3:12057583-12057602 | None:intergenic | 30.0% |
| ! | AATCAATTTTAGATGGAGGT+TGG | - | chr5_3:12057584-12057603 | None:intergenic | 30.0% |
| GATGCAATCTAGGAATTTAA+AGG | - | chr5_3:12057741-12057760 | None:intergenic | 30.0% | |
| AGTCTTCAAGAAAGATAAAC+TGG | + | chr5_3:12057972-12057991 | Msa0799000:intron | 30.0% | |
| GTCTTCAAGAAAGATAAACT+GGG | + | chr5_3:12057973-12057992 | Msa0799000:intron | 30.0% | |
| CTTATGTGAAAAAAACGAGT+TGG | + | chr5_3:12058445-12058464 | Msa0799000:intron | 30.0% | |
| ! | TTGAATTTAAGACTGAGCTA+AGG | - | chr5_3:12058507-12058526 | None:intergenic | 30.0% |
| TATGATGCAGTAAATACATC+AGG | - | chr5_3:12058559-12058578 | None:intergenic | 30.0% | |
| AACTGACTATATGTTCTTGT+AGG | + | chr5_3:12058868-12058887 | Msa0799000:three_prime_UTR | 30.0% | |
| CGATCTGATTGTGTAAATGA+AGG | - | chr5_3:12054765-12054784 | None:intergenic | 35.0% | |
| TTGTTGTGGTAGATGAACAA+CGG | - | chr5_3:12054809-12054828 | None:intergenic | 35.0% | |
| ! | AACATGGATTCAGGTTTGTT+TGG | + | chr5_3:12055006-12055025 | Msa0799000:CDS | 35.0% |
| ! | GATTCAGGTTTGTTTGGAAA+AGG | + | chr5_3:12055012-12055031 | Msa0799000:CDS | 35.0% |
| ! | AGTTTTCCTTTCTCAATCCA+TGG | + | chr5_3:12055512-12055531 | Msa0799000:intron | 35.0% |
| CAAGTAGTTAGTTATGTCAG+TGG | - | chr5_3:12055772-12055791 | None:intergenic | 35.0% | |
| AAAACCAATCAACAAGACTC+AGG | - | chr5_3:12056233-12056252 | None:intergenic | 35.0% | |
| AATTTGCAAATGGGGTTGTT+TGG | + | chr5_3:12056297-12056316 | Msa0799000:intron | 35.0% | |
| ! | TTTTCCTACATAAGTCTCAC+AGG | - | chr5_3:12056425-12056444 | None:intergenic | 35.0% |
| ATTGTAAACCAACGAATCTC+GGG | - | chr5_3:12056488-12056507 | None:intergenic | 35.0% | |
| ATAGTTTAACTGGAAGTTCC+TGG | + | chr5_3:12057040-12057059 | Msa0799000:intron | 35.0% | |
| TACAATCACCCAAAGATTCA+AGG | + | chr5_3:12057067-12057086 | Msa0799000:intron | 35.0% | |
| GATCAATTAAAGGACACTCT+GGG | - | chr5_3:12057108-12057127 | None:intergenic | 35.0% | |
| CAATTATGACCTTAGCATCT+TGG | - | chr5_3:12057130-12057149 | None:intergenic | 35.0% | |
| AGGTTTCCTCTATTTAGTAC+AGG | + | chr5_3:12057173-12057192 | Msa0799000:intron | 35.0% | |
| CTTCGTCTTGGATCAATTAA+AGG | - | chr5_3:12057248-12057267 | None:intergenic | 35.0% | |
| CAAACTTGTGACGAATTAGA+TGG | + | chr5_3:12057283-12057302 | Msa0799000:intron | 35.0% | |
| GTCATGTCAAGTCATAAGTA+TGG | + | chr5_3:12057318-12057337 | Msa0799000:intron | 35.0% | |
| !! | CCACACTATTTCTGCATTAT+CGG | - | chr5_3:12057416-12057435 | None:intergenic | 35.0% |
| AATGCAGAAATAGTGTGGTT+AGG | + | chr5_3:12057418-12057437 | Msa0799000:intron | 35.0% | |
| ! | TCTAGTTTGGTCCCTAAAAA+AGG | + | chr5_3:12057508-12057527 | Msa0799000:intron | 35.0% |
| AATGTTTGAATAGAGGACTC+AGG | - | chr5_3:12058002-12058021 | None:intergenic | 35.0% | |
| TTTCCAAAATGATGACACAG+TGG | - | chr5_3:12058081-12058100 | None:intergenic | 35.0% | |
| AGATAATCACTTGACTCTCA+AGG | + | chr5_3:12058256-12058275 | Msa0799000:intron | 35.0% | |
| GATAATCACTTGACTCTCAA+GGG | + | chr5_3:12058257-12058276 | Msa0799000:intron | 35.0% | |
| AAAAGATTGCGAAGAAACAG+TGG | + | chr5_3:12058705-12058724 | Msa0799000:three_prime_UTR | 35.0% | |
| GAAGCATGAAAATCTGAGTA+GGG | - | chr5_3:12058740-12058759 | None:intergenic | 35.0% | |
| AATTTGTACGACAACAAACG+TGG | - | chr5_3:12058847-12058866 | None:intergenic | 35.0% | |
| ACTTGTGCATTTAGCATAGT+TGG | - | chr5_3:12058899-12058918 | None:intergenic | 35.0% | |
| GCTGTGATGCAAAATGAAGA+TGG | - | chr5_3:12054670-12054689 | None:intergenic | 40.0% | |
| ATAAATCAATAACGCGGTGC+CGG | + | chr5_3:12054713-12054732 | Msa0799000:five_prime_UTR | 40.0% | |
| TGTTGTGGTAGATGAACAAC+GGG | - | chr5_3:12054808-12054827 | None:intergenic | 40.0% | |
| ! | CAGGTTTGTTTGGAAAAGGA+AGG | + | chr5_3:12055016-12055035 | Msa0799000:CDS | 40.0% |
| !! | CGATTTTGCTTCTCGCTTTT+TGG | + | chr5_3:12055061-12055080 | Msa0799000:CDS | 40.0% |
| !! | GCTTTTTGGTCCATGTTTAC+TGG | + | chr5_3:12055075-12055094 | Msa0799000:CDS | 40.0% |
| AGAAACGGTACCAGTAAACA+TGG | - | chr5_3:12055088-12055107 | None:intergenic | 40.0% | |
| TTTGTGTGTGTAGGAAATGG+AGG | + | chr5_3:12055280-12055299 | Msa0799000:intron | 40.0% | |
| GAATTGACAAGTGATGTTCC+TGG | + | chr5_3:12055404-12055423 | Msa0799000:CDS | 40.0% | |
| ATAGCATCATCTCTAACACC+AGG | - | chr5_3:12055425-12055444 | None:intergenic | 40.0% | |
| !! | AAACTAACCGTGGATTGGAT+AGG | - | chr5_3:12055497-12055516 | None:intergenic | 40.0% |
| AAGGAAAACTAACCGTGGAT+TGG | - | chr5_3:12055502-12055521 | None:intergenic | 40.0% | |
| TGAGAAAGGAAAACTAACCG+TGG | - | chr5_3:12055507-12055526 | None:intergenic | 40.0% | |
| AACATTAACTAACTGCGCCA+TGG | - | chr5_3:12055532-12055551 | None:intergenic | 40.0% | |
| TCAAACTCAATGGTCCTGTT+TGG | + | chr5_3:12055726-12055745 | Msa0799000:intron | 40.0% | |
| TCAATGGTCCTGTTTGGATT+GGG | + | chr5_3:12055732-12055751 | Msa0799000:intron | 40.0% | |
| TCGTATAACCCAATCCAAAC+AGG | - | chr5_3:12055743-12055762 | None:intergenic | 40.0% | |
| ! | AGACTCTTTGAGAGAGCTTA+TGG | + | chr5_3:12055794-12055813 | Msa0799000:intron | 40.0% |
| GGTGGCTTCATAAACTATCT+CGG | - | chr5_3:12055862-12055881 | None:intergenic | 40.0% | |
| TTTGCCTGTGAGACTTATGT+AGG | + | chr5_3:12056418-12056437 | Msa0799000:intron | 40.0% | |
| GTGATGTGGATGCATAAAGA+GGG | - | chr5_3:12056708-12056727 | None:intergenic | 40.0% | |
| AGTGATGTGGATGCATAAAG+AGG | - | chr5_3:12056709-12056728 | None:intergenic | 40.0% | |
| GTGTCATCACGAGTTAGTAA+AGG | - | chr5_3:12056832-12056851 | None:intergenic | 40.0% | |
| GATGACACGACTCAATTACA+TGG | + | chr5_3:12056844-12056863 | Msa0799000:intron | 40.0% | |
| GGATCAATTAAAGGACACTC+TGG | - | chr5_3:12057109-12057128 | None:intergenic | 40.0% | |
| ! | ATGAACTGTTAGCTTCGTCT+TGG | - | chr5_3:12057260-12057279 | None:intergenic | 40.0% |
| CCGATAATGCAGAAATAGTG+TGG | + | chr5_3:12057413-12057432 | Msa0799000:intron | 40.0% | |
| AAGATCCATTATGGTCACTG+AGG | + | chr5_3:12057471-12057490 | Msa0799000:intron | 40.0% | |
| TTCTTCCTCAGTGACCATAA+TGG | - | chr5_3:12057479-12057498 | None:intergenic | 40.0% | |
| GTCACTGAGGAAGAAAATAC+AGG | + | chr5_3:12057484-12057503 | Msa0799000:intron | 40.0% | |
| GTCCTCGCAACAAATAAACT+AGG | + | chr5_3:12057542-12057561 | Msa0799000:intron | 40.0% | |
| ! | GTCCTAGTTTATTTGTTGCG+AGG | - | chr5_3:12057547-12057566 | None:intergenic | 40.0% |
| TCAGTCTGTAGTCATTGTCA+GGG | - | chr5_3:12057676-12057695 | None:intergenic | 40.0% | |
| TCAGGAAGAAGATGCAATCT+AGG | - | chr5_3:12057751-12057770 | None:intergenic | 40.0% | |
| CTATTCTCAAGGACCAGAAT+AGG | - | chr5_3:12057831-12057850 | None:intergenic | 40.0% | |
| TGCTCCTTGAGAAAAAAACC+TGG | + | chr5_3:12057910-12057929 | Msa0799000:intron | 40.0% | |
| GCTCCTTGAGAAAAAAACCT+GGG | + | chr5_3:12057911-12057930 | Msa0799000:intron | 40.0% | |
| !!! | GTTCCCAGGTTTTTTTCTCA+AGG | - | chr5_3:12057917-12057936 | None:intergenic | 40.0% |
| AAAAAACCTGGGAACCAGTT+TGG | + | chr5_3:12057922-12057941 | Msa0799000:intron | 40.0% | |
| ! | TGTCCACTGTGTCATCATTT+TGG | + | chr5_3:12058075-12058094 | Msa0799000:intron | 40.0% |
| ACAGGAATGCAAATGTGAAG+AGG | - | chr5_3:12058184-12058203 | None:intergenic | 40.0% | |
| GGAATTTAGCGAAAGTAGAG+AGG | + | chr5_3:12058278-12058297 | Msa0799000:intron | 40.0% | |
| ! | CATCATATTTCAGAGAGCAC+AGG | + | chr5_3:12058572-12058591 | Msa0799000:intron | 40.0% |
| ! | TTCCTTTGTCAGCTTGCTTA+AGG | - | chr5_3:12058611-12058630 | None:intergenic | 40.0% |
| ACAAAGGAAAAGAAGCGATG+CGG | + | chr5_3:12058622-12058641 | Msa0799000:CDS | 40.0% | |
| ! | GGAAGCATGAAAATCTGAGT+AGG | - | chr5_3:12058741-12058760 | None:intergenic | 40.0% |
| ATGTGAATGTGAGACACCAC+CGG | - | chr5_3:12054735-12054754 | None:intergenic | 45.0% | |
| TCGGAAATGAAGGATGACGA+TGG | + | chr5_3:12054946-12054965 | Msa0799000:exon | 45.0% | |
| CGGAAATGAAGGATGACGAT+GGG | + | chr5_3:12054947-12054966 | Msa0799000:exon | 45.0% | |
| ACCAGACCAACGAAGAGAAA+CGG | - | chr5_3:12055103-12055122 | None:intergenic | 45.0% | |
| ! | AGTATCGAGGTCACTGGATA+AGG | - | chr5_3:12055136-12055155 | None:intergenic | 45.0% |
| ACATCGAGATCGTCGTGAAT+CGG | - | chr5_3:12055159-12055178 | None:intergenic | 45.0% | |
| TGTGTAGGAAATGGAGGAGA+GGG | + | chr5_3:12055286-12055305 | Msa0799000:intron | 45.0% | |
| AGAAAGTGGTGAGGCATATG+TGG | + | chr5_3:12055309-12055328 | Msa0799000:CDS | 45.0% | |
| GAAAGTGGTGAGGCATATGT+GGG | + | chr5_3:12055310-12055329 | Msa0799000:CDS | 45.0% | |
| AAAGCCTCTTGCCAAAACCT+CGG | - | chr5_3:12055368-12055387 | None:intergenic | 45.0% | |
| !! | GTTTTGGCAAGAGGCTTTTG+AGG | + | chr5_3:12055370-12055389 | Msa0799000:CDS | 45.0% |
| CTCAATGGTCCTGTTTGGAT+TGG | + | chr5_3:12055731-12055750 | Msa0799000:intron | 45.0% | |
| CCAATCAACAAGACTCAGGT+TGG | - | chr5_3:12056229-12056248 | None:intergenic | 45.0% | |
| !! | CCAACCTGAGTCTTGTTGAT+TGG | + | chr5_3:12056226-12056245 | Msa0799000:intron | 45.0% |
| TGCAAATGGGGTTGTTTGGT+TGG | + | chr5_3:12056301-12056320 | Msa0799000:intron | 45.0% | |
| GCAAATGGGGTTGTTTGGTT+GGG | + | chr5_3:12056302-12056321 | Msa0799000:intron | 45.0% | |
| CAAATGGGGTTGTTTGGTTG+GGG | + | chr5_3:12056303-12056322 | Msa0799000:intron | 45.0% | |
| GTTTAACTGGAAGTTCCTGG+TGG | + | chr5_3:12057043-12057062 | Msa0799000:intron | 45.0% | |
| ATGAAGCAAAGCTGTCTGTC+TGG | + | chr5_3:12057378-12057397 | Msa0799000:intron | 45.0% | |
| GCAGAAATAGTGTGGTTAGG+AGG | + | chr5_3:12057421-12057440 | Msa0799000:intron | 45.0% | |
| TTTAGATGGAGGTTGGGAGA+GGG | - | chr5_3:12057577-12057596 | None:intergenic | 45.0% | |
| ! | TTTTAGATGGAGGTTGGGAG+AGG | - | chr5_3:12057578-12057597 | None:intergenic | 45.0% |
| GTCAGTCTGTAGTCATTGTC+AGG | - | chr5_3:12057677-12057696 | None:intergenic | 45.0% | |
| ATAACGTCCAGGACGAAGAA+AGG | - | chr5_3:12057778-12057797 | None:intergenic | 45.0% | |
| TTCGTCCTGGACGTTATTGA+AGG | + | chr5_3:12057781-12057800 | Msa0799000:intron | 45.0% | |
| AAGGTCCTTCAATAACGTCC+AGG | - | chr5_3:12057789-12057808 | None:intergenic | 45.0% | |
| TGGACGTTATTGAAGGACCT+TGG | + | chr5_3:12057788-12057807 | Msa0799000:intron | 45.0% | |
| ATTGAAGGACCTTGGAGAAC+TGG | + | chr5_3:12057796-12057815 | Msa0799000:intron | 45.0% | |
| TCTTGAACACCAGTTCTCCA+AGG | - | chr5_3:12057808-12057827 | None:intergenic | 45.0% | |
| CTGGTGTTCAAGACCTATTC+TGG | + | chr5_3:12057815-12057834 | Msa0799000:intron | 45.0% | |
| ! | TGTTTTCCAAGGGACCAAAC+TGG | - | chr5_3:12057939-12057958 | None:intergenic | 45.0% |
| AATGTGAAGAGGCTCAGATG+CGG | - | chr5_3:12058173-12058192 | None:intergenic | 45.0% | |
| GGCTTCTTCGCATATGTTAC+TGG | - | chr5_3:12058486-12058505 | None:intergenic | 45.0% | |
| AGCCTTAAGCAAGCTGACAA+AGG | + | chr5_3:12058606-12058625 | Msa0799000:CDS | 45.0% | |
| AGATTGCGAAGAAACAGTGG+TGG | + | chr5_3:12058708-12058727 | Msa0799000:three_prime_UTR | 45.0% | |
| GATTGCGAAGAAACAGTGGT+GGG | + | chr5_3:12058709-12058728 | Msa0799000:three_prime_UTR | 45.0% | |
| !! | TTTAAAAGTTAAATAATAAT+TGG | + | chr5_3:12057446-12057465 | Msa0799000:intron | 5.0% |
| GACGGCGGCGATTAACAAAA+AGG | + | chr5_3:12054981-12055000 | Msa0799000:CDS | 50.0% | |
| CTGGTACCGTTTCTCTTCGT+TGG | + | chr5_3:12055094-12055113 | Msa0799000:CDS | 50.0% | |
| ACCGTTTCTCTTCGTTGGTC+TGG | + | chr5_3:12055099-12055118 | Msa0799000:CDS | 50.0% | |
| !! | AATCGGAGTATCGAGGTCAC+TGG | - | chr5_3:12055142-12055161 | None:intergenic | 50.0% |
| GTGTGTAGGAAATGGAGGAG+AGG | + | chr5_3:12055285-12055304 | Msa0799000:intron | 50.0% | |
| AATGGAGGAGAGGGAGAAAG+TGG | + | chr5_3:12055295-12055314 | Msa0799000:CDS | 50.0% | |
| ATGTGTACACCAACAGCCGT+AGG | + | chr5_3:12055333-12055352 | Msa0799000:CDS | 50.0% | |
| TCCACCTCCTATCCAATCCA+CGG | + | chr5_3:12055487-12055506 | Msa0799000:CDS | 50.0% | |
| !! | CTAACCGTGGATTGGATAGG+AGG | - | chr5_3:12055494-12055513 | None:intergenic | 50.0% |
| ! | ACTGCGCCATGGATTGAGAA+AGG | - | chr5_3:12055521-12055540 | None:intergenic | 50.0% |
| TTGCATGAGACTTCGTACCC+AGG | - | chr5_3:12056360-12056379 | None:intergenic | 50.0% | |
| TCATGCTTCCCGAGATTCGT+TGG | + | chr5_3:12056477-12056496 | Msa0799000:intron | 50.0% | |
| TTTGGGTGATTGTAGCCACC+AGG | - | chr5_3:12057061-12057080 | None:intergenic | 50.0% | |
| !! | AGGACGAAGAAAGGCGTTTC+AGG | - | chr5_3:12057769-12057788 | None:intergenic | 50.0% |
| TGAAACGCCTTTCTTCGTCC+TGG | + | chr5_3:12057768-12057787 | Msa0799000:intron | 50.0% | |
| GCGTGCTTAAAGACCACTCT+AGG | + | chr5_3:12058644-12058663 | Msa0799000:exon | 50.0% | |
| ! | ACCACTCTAGGAGCAGTCAA+GGG | + | chr5_3:12058656-12058675 | Msa0799000:three_prime_UTR | 50.0% |
| ! | AATCAATAACGCGGTGCCGG+TGG | + | chr5_3:12054716-12054735 | Msa0799000:five_prime_UTR | 55.0% |
| !! | CGTCGTGAATCGGAGTATCG+AGG | - | chr5_3:12055149-12055168 | None:intergenic | 55.0% |
| AGGAGAGGGAGAAAGTGGTG+AGG | + | chr5_3:12055300-12055319 | Msa0799000:CDS | 55.0% | |
| ACACCAACAGCCGTAGGATC+AGG | + | chr5_3:12055339-12055358 | Msa0799000:CDS | 55.0% | |
| CAACCTGATCCTACGGCTGT+TGG | - | chr5_3:12055345-12055364 | None:intergenic | 55.0% | |
| ACCTCGGCAACCTGATCCTA+CGG | - | chr5_3:12055352-12055371 | None:intergenic | 55.0% | |
| !! | GGATCAGGTTGCCGAGGTTT+TGG | + | chr5_3:12055354-12055373 | Msa0799000:CDS | 55.0% |
| !! | GTTGCCGAGGTTTTGGCAAG+AGG | + | chr5_3:12055361-12055380 | Msa0799000:CDS | 55.0% |
| !! | ACCGTGGATTGGATAGGAGG+TGG | - | chr5_3:12055491-12055510 | None:intergenic | 55.0% |
| GGCTGTGTCAGCAAACAGAG+AGG | + | chr5_3:12056877-12056896 | Msa0799000:intron | 55.0% | |
| ! | AAGGGACCAAACTGGTTCCC+AGG | - | chr5_3:12057931-12057950 | None:intergenic | 55.0% |
| TGGGAACCAGTTTGGTCCCT+TGG | + | chr5_3:12057930-12057949 | Msa0799000:intron | 55.0% | |
| GGTCCTAGACCTAGTGTTGC+CGG | + | chr5_3:12058144-12058163 | Msa0799000:intron | 55.0% | |
| GTCCTAGACCTAGTGTTGCC+GGG | + | chr5_3:12058145-12058164 | Msa0799000:intron | 55.0% | |
| ! | GACCACTCTAGGAGCAGTCA+AGG | + | chr5_3:12058655-12058674 | Msa0799000:three_prime_UTR | 55.0% |
| ACCCTTGACTGCTCCTAGAG+TGG | - | chr5_3:12058660-12058679 | None:intergenic | 55.0% | |
| TCTAGGAGCAGTCAAGGGTC+TGG | + | chr5_3:12058661-12058680 | Msa0799000:three_prime_UTR | 55.0% | |
| ! | TCAAGGGTCTGGCTTGTGCT+TGG | + | chr5_3:12058672-12058691 | Msa0799000:three_prime_UTR | 55.0% |
| ! | CGATGGGCTTCCAACGACGA+CGG | + | chr5_3:12054963-12054982 | Msa0799000:CDS | 60.0% |
| TTAATCGCCGCCGTCGTCGT+TGG | - | chr5_3:12054976-12054995 | None:intergenic | 60.0% | |
| CACCCGGCAACACTAGGTCT+AGG | - | chr5_3:12058150-12058169 | None:intergenic | 60.0% | |
| TGGGCTTCCAACGACGACGG+CGG | + | chr5_3:12054966-12054985 | Msa0799000:CDS | 65.0% | |
| ! | GCCGTAGGATCAGGTTGCCG+AGG | + | chr5_3:12055348-12055367 | Msa0799000:CDS | 65.0% |
| ATGCGGCACCCGGCAACACT+AGG | - | chr5_3:12058156-12058175 | None:intergenic | 65.0% | |
| AGAGGCTCAGATGCGGCACC+CGG | - | chr5_3:12058166-12058185 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 12054656 | 12059025 | 12054656 | ID=Msa0799000;Name=Msa0799000 |
| chr5_3 | mRNA | 12054656 | 12059025 | 12054656 | ID=Msa0799000-mRNA-1;Parent=Msa0799000;Name=Msa0799000-mRNA-1;_AED=0.02;_eAED=0.02;_QI=296|1|1|1|1|1|3|372|171 |
| chr5_3 | exon | 12054656 | 12055182 | 12054656 | ID=Msa0799000-mRNA-1:exon:4894;Parent=Msa0799000-mRNA-1 |
| chr5_3 | exon | 12055293 | 12055508 | 12055293 | ID=Msa0799000-mRNA-1:exon:4895;Parent=Msa0799000-mRNA-1 |
| chr5_3 | exon | 12058585 | 12059025 | 12058585 | ID=Msa0799000-mRNA-1:exon:4896;Parent=Msa0799000-mRNA-1 |
| chr5_3 | five_prime_UTR | 12054656 | 12054951 | 12054656 | ID=Msa0799000-mRNA-1:five_prime_utr;Parent=Msa0799000-mRNA-1 |
| chr5_3 | CDS | 12054952 | 12055182 | 12054952 | ID=Msa0799000-mRNA-1:cds;Parent=Msa0799000-mRNA-1 |
| chr5_3 | CDS | 12055293 | 12055508 | 12055293 | ID=Msa0799000-mRNA-1:cds;Parent=Msa0799000-mRNA-1 |
| chr5_3 | CDS | 12058585 | 12058653 | 12058585 | ID=Msa0799000-mRNA-1:cds;Parent=Msa0799000-mRNA-1 |
| chr5_3 | three_prime_UTR | 12058654 | 12059025 | 12058654 | ID=Msa0799000-mRNA-1:three_prime_utr;Parent=Msa0799000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
