AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1069670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069670 MtrunA17_Chr7g0251591 97.849 744 16 0 1 744 1 744 0.0 1483
Msa1069670 MtrunA17_Chr3g0131841 49.383 162 74 3 349 509 293 447 1.90e-35 140
Msa1069670 MtrunA17_Chr3g0131831 52.525 99 37 2 647 743 91 181 1.23e-25 104
Msa1069670 MtrunA17_Chr3g0131831 70.909 55 16 0 508 562 12 66 4.24e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069670 AT3G26890.5 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.1 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.4 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.3 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.7 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.8 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.2 41.480 757 319 24 1 743 1 647 6.31e-147 444
Msa1069670 AT3G26890.6 41.480 757 318 25 1 743 1 646 1.64e-145 441
Msa1069670 AT5G41110.1 43.049 669 227 24 93 743 89 621 5.14e-133 407
Msa1069670 AT5G41110.2 43.049 669 227 24 93 743 89 621 5.14e-133 407
Msa1069670 AT5G41110.3 42.424 429 180 16 93 509 89 462 8.27e-71 239

Find 221 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCTGGCCGGTTTGTTTC+TGG 0.108815 7_2:+65439838 Msa1069670:CDS
CTACTTGTGTAATGATTTAA+AGG 0.129935 7_2:+65442604 Msa1069670:CDS
CTTGCCGTGTTAAGTATTTC+TGG 0.145625 7_2:+65440020 Msa1069670:CDS
CAACAATGTCAATAATTTAA+TGG 0.166881 7_2:+65444421 Msa1069670:three_prime_UTR
AATGGAAGCTTCTGTGATTT+AGG 0.225625 7_2:-65440056 None:intergenic
GGGTTCTTACTCCTGCTTCC+AGG 0.259187 7_2:+65438924 Msa1069670:CDS
TTTGTTCCAGTTGCAGTTCT+TGG 0.264094 7_2:+65438198 Msa1069670:five_prime_UTR
TCGAAGTATCTTGGATCTTC+AGG 0.267708 7_2:-65444251 None:intergenic
GCAGTTATACAATGCCTTCT+TGG 0.268730 7_2:+65439245 Msa1069670:CDS
TTCTTCCTTTCATTGGTATA+CGG 0.280459 7_2:-65440226 None:intergenic
CATTTCTAATGAGGCATTCT+TGG 0.283943 7_2:-65438783 None:intergenic
TGATGAAAATGTCGAACTTT+TGG 0.288161 7_2:+65438637 Msa1069670:CDS
GCAAATCTCCATTCTTCTTT+TGG 0.289993 7_2:+65439010 Msa1069670:CDS
ATCATCCACTATGGATTGTT+TGG 0.290000 7_2:+65438142 Msa1069670:five_prime_UTR
TCGACACTAGTAACAGAAAA+TGG 0.292636 7_2:-65440074 None:intergenic
GACATTGTTGAAGTATTTAC+AGG 0.295023 7_2:-65444408 None:intergenic
AACAATGTCAATAATTTAAT+GGG 0.296411 7_2:+65444422 Msa1069670:three_prime_UTR
GATAATAAGAAGGCAAATAT+TGG 0.299727 7_2:+65439214 Msa1069670:CDS
TGTATATAGTTACATGCTAT+TGG 0.317266 7_2:+65444336 Msa1069670:three_prime_UTR
CTATTAAAATTGAACACTTA+AGG 0.322313 7_2:+65439383 Msa1069670:CDS
AAGAACCCTCCGTTCAGTTT+TGG 0.325248 7_2:-65438909 None:intergenic
AGAATTTCCCGCAAGATCTA+TGG 0.325534 7_2:-65440126 None:intergenic
TTCCAATTGTAGTTGTTAAT+AGG 0.329949 7_2:+65438348 Msa1069670:five_prime_UTR
AGCTGAATTCTTCCTTTCAT+TGG 0.332758 7_2:-65440233 None:intergenic
CGGGAAATTCTTTATCAAAC+AGG 0.333370 7_2:+65440138 Msa1069670:CDS
ATTTCCTGAAAGAATGAAAA+TGG 0.335182 7_2:+65439495 Msa1069670:CDS
GGCTTCATCTGCTGCGAGTA+TGG 0.338263 7_2:+65438164 Msa1069670:five_prime_UTR
CAGTTGATGTCGAAGTATCT+TGG 0.338633 7_2:-65444260 None:intergenic
ACTTTCAGTCAGAAGGTCTT+TGG 0.340125 7_2:+65439792 Msa1069670:CDS
CATAGATACAAACCTTAGTA+TGG 0.350741 7_2:-65439864 None:intergenic
ACATAGTATGAAGTTCTTGT+AGG 0.352298 7_2:+65438296 Msa1069670:five_prime_UTR
AGAAGATGAGATAAGGGTTA+AGG 0.354226 7_2:-65437228 None:intergenic
CCCTTCTGCAATTCAACCTT+GGG 0.355021 7_2:-65437365 None:intergenic
TATTAAAATTGAACACTTAA+GGG 0.358392 7_2:+65439384 Msa1069670:CDS
TCATCCACTATGGATTGTTT+GGG 0.364717 7_2:+65438143 Msa1069670:five_prime_UTR
ATTTCTAATGAGGCATTCTT+GGG 0.368123 7_2:-65438782 None:intergenic
TTGCCGTGTTAAGTATTTCT+GGG 0.370614 7_2:+65440021 Msa1069670:CDS
TTCATTCTTTCAGGAAATCT+AGG 0.372002 7_2:-65439490 None:intergenic
GAGAAAACATGTGATGAATC+AGG 0.378217 7_2:+65442407 Msa1069670:CDS
GTCTTTGGTTGGTTCATTTG+AGG 0.384587 7_2:+65439807 Msa1069670:CDS
GTATGAAGTTCTTGTAGGTT+TGG 0.385354 7_2:+65438301 Msa1069670:five_prime_UTR
CTGCTCAAAGCAATTTGATA+AGG 0.387117 7_2:-65439269 None:intergenic
AGATTTCTGTCCATCTTCTC+TGG 0.387579 7_2:+65439684 Msa1069670:CDS
GGAATGAAAGAAAGGAGTCT+TGG 0.390571 7_2:+65442384 Msa1069670:CDS
ATTGCAATTCTTTATCTCTT+CGG 0.393497 7_2:-65439539 None:intergenic
AATTCTTTATCAAACAGGTT+TGG 0.400272 7_2:+65440143 Msa1069670:CDS
AAAAGATCAAATTAAACAAA+AGG 0.402774 7_2:-65437316 None:intergenic
GAACCTTGCAGAATTAGAAA+TGG 0.404122 7_2:-65439752 None:intergenic
AATCTTACTTTGGTACCAAT+TGG 0.407975 7_2:-65440847 None:intergenic
ATTAAGTTCTCTTCCAGAAA+AGG 0.409105 7_2:+65442550 Msa1069670:CDS
GAAGATGAGATAAGGGTTAA+GGG 0.410652 7_2:-65437227 None:intergenic
TAGTTGTTAGCTGATGTTGT+AGG 0.410682 7_2:+65438419 Msa1069670:five_prime_UTR
ACTGACACGCTTACTAGTTT+CGG 0.413584 7_2:-65438390 None:intergenic
AATGTCTTATCAGAAACATT+TGG 0.418483 7_2:-65438806 None:intergenic
TCTTCCAGAAAAGGCTGGAT+TGG 0.420395 7_2:+65442559 Msa1069670:CDS
TACCTATTAACAACTACAAT+TGG 0.423061 7_2:-65438350 None:intergenic
GAATGAAAGAAAGGAGTCTT+GGG 0.423283 7_2:+65442385 Msa1069670:CDS
GCTTCACTTGATGGTATTTG+TGG 0.424333 7_2:-65438614 None:intergenic
TCAGTTAAACTTCCATGATC+TGG 0.425257 7_2:-65442350 None:intergenic
ATCTTGGATCTTCAGGGAAA+TGG 0.426868 7_2:-65444244 None:intergenic
ACTCCTGCTTCCAGGGTTGT+CGG 0.426874 7_2:+65438932 Msa1069670:CDS
ACAGATATTACGCCACTTTG+AGG 0.431291 7_2:-65439427 None:intergenic
ATATATCCAAGAACTGCAAC+TGG 0.431562 7_2:-65438204 None:intergenic
GACCAATGAAGTGGCAGATT+CGG 0.433702 7_2:-65439053 None:intergenic
TAGGTTTGGAATCATTTGAT+TGG 0.438295 7_2:+65438315 Msa1069670:five_prime_UTR
ACTGTTAGAACTCTTTGAAC+AGG 0.439854 7_2:-65442444 None:intergenic
AACATTTGGCATTTCTAATG+AGG 0.440023 7_2:-65438792 None:intergenic
GTCATTTCCACTGTCCAAAC+CGG 0.441003 7_2:-65442159 None:intergenic
AAACACAAAGGTTTCTAGCT+TGG 0.446488 7_2:+65442289 Msa1069670:CDS
CCTCTTTCGTTGTCACCCCT+CGG 0.447832 7_2:+65439466 Msa1069670:CDS
CTTCTGTTTCCACCTTTCAT+CGG 0.452187 7_2:+65437415 Msa1069670:five_prime_UTR
CACCGAATCTGCCACTTCAT+TGG 0.454316 7_2:+65439051 Msa1069670:CDS
TAAGCCCTCGTTTCAGAAGT+TGG 0.456282 7_2:-65440169 None:intergenic
TAGGTCTTACCGTGATCATC+TGG 0.457601 7_2:+65438438 Msa1069670:five_prime_UTR
GGTTCTTACTCCTGCTTCCA+GGG 0.461629 7_2:+65438925 Msa1069670:CDS
TCCATGATCTGGTGAGTGCT+TGG 0.461711 7_2:-65442339 None:intergenic
AGTTCTCTTCCAGAAAAGGC+TGG 0.462804 7_2:+65442554 Msa1069670:CDS
CATAGTGGATGATCAGTTCA+TGG 0.463238 7_2:-65438132 None:intergenic
CTTTCATTGGTATACGGAAA+CGG 0.463415 7_2:-65440220 None:intergenic
GGTCCTTTGCTTGAAAATAG+AGG 0.463606 7_2:+65439334 Msa1069670:CDS
AAAATGAAGAAGATGAGATA+AGG 0.466322 7_2:-65437235 None:intergenic
GTGACTTAAGTATTAGAGAT+GGG 0.470105 7_2:+65438587 Msa1069670:exon
ACCCTTCTGCAATTCAACCT+TGG 0.471155 7_2:-65437366 None:intergenic
TAATAGTTGGTGAACTACCC+TGG 0.473332 7_2:-65439366 None:intergenic
AAAGGTGATTCTCTTGACAT+AGG 0.476184 7_2:+65439127 Msa1069670:CDS
AAATGAAGAAGATGAGATAA+GGG 0.478642 7_2:-65437234 None:intergenic
AGTGATGTTGAAATGCTTTG+TGG 0.479179 7_2:+65444490 Msa1069670:three_prime_UTR
CATGAACTGATCATCCACTA+TGG 0.479524 7_2:+65438133 Msa1069670:five_prime_UTR
AAGGTGGAAACAGAAGAATC+AGG 0.480188 7_2:-65437408 None:intergenic
CGAAGTATCTTGGATCTTCA+GGG 0.483518 7_2:-65444250 None:intergenic
TCCAAGCACTCACCAGATCA+TGG 0.487462 7_2:+65442338 Msa1069670:CDS
CGCCTAGAAAATAATTCAAA+GGG 0.489033 7_2:-65444528 None:intergenic
TATGCATCCATAGATCTTGC+GGG 0.489705 7_2:+65440119 Msa1069670:CDS
TGAAAATGGCCACAGGATGC+AGG 0.490719 7_2:+65439509 Msa1069670:CDS
GAAATGTCGTCCAGAGAAGA+TGG 0.495083 7_2:-65439694 None:intergenic
TGCATTACTTCCCCACTACA+CGG 0.497521 7_2:-65442218 None:intergenic
CAAATTAAACAAAAGGGTGT+TGG 0.501179 7_2:-65437309 None:intergenic
TCTTTATCAAACAGGTTTGG+AGG 0.501364 7_2:+65440146 Msa1069670:CDS
TCGTTAATTATTTGATCCCA+AGG 0.502467 7_2:+65437349 Msa1069670:five_prime_UTR
TTCATGCTGCTTATAGAAGA+GGG 0.503762 7_2:-65438701 None:intergenic
TAGAAAAGATGATTCACAAA+TGG 0.504941 7_2:+65440190 Msa1069670:CDS
TGTTTCTGGAAACCATACTA+AGG 0.505232 7_2:+65439852 Msa1069670:CDS
GAAGAATGGAGATTTGCTAC+TGG 0.505944 7_2:-65439004 None:intergenic
AATAGTTGGTGAACTACCCT+GGG 0.507763 7_2:-65439365 None:intergenic
ATGTGAGAGGAATGAAAGAA+AGG 0.508447 7_2:+65442376 Msa1069670:CDS
ACAGATGTTAATGTTGTTGT+GGG 0.508480 7_2:+65437159 Msa1069670:five_prime_UTR
TATGGTTTCCAGAAACAAAC+CGG 0.508917 7_2:-65439846 None:intergenic
AGATACTACCAAAAGAAGAA+TGG 0.509004 7_2:-65439018 None:intergenic
TAATGCACATCTTACAATGC+TGG 0.509050 7_2:-65444554 None:intergenic
ATGAATAGTGTAAACACTCA+TGG 0.509594 7_2:+65438719 Msa1069670:CDS
AAAGATCAAATTAAACAAAA+GGG 0.510854 7_2:-65437315 None:intergenic
TGACTGAGGGGAAGTTGAGC+TGG 0.511860 7_2:-65442123 None:intergenic
AATCTGCCACTTCATTGGTC+AGG 0.513369 7_2:+65439056 Msa1069670:CDS
GAAGTATTTACAGGAGGAAG+AGG 0.515600 7_2:-65444399 None:intergenic
AGGACAATGGCCTCAAGTAA+AGG 0.516150 7_2:-65444359 None:intergenic
AGTGACTTAAGTATTAGAGA+TGG 0.518035 7_2:+65438586 Msa1069670:exon
AACCTTGCAGAATTAGAAAT+GGG 0.518979 7_2:-65439751 None:intergenic
GGGTGTGCTGCATGTACCCT+TGG 0.519395 7_2:+65438740 Msa1069670:CDS
TCAGTCAGAAGGTCTTTGGT+TGG 0.520387 7_2:+65439796 Msa1069670:CDS
AGATGGACAGAAATCTTTGA+AGG 0.523799 7_2:-65439677 None:intergenic
TTTCAGGAAATCTAGGACCG+AGG 0.525504 7_2:-65439483 None:intergenic
CCGCCTAGAAAATAATTCAA+AGG 0.526092 7_2:-65444529 None:intergenic
TGCCGTGTTAAGTATTTCTG+GGG 0.526820 7_2:+65440022 Msa1069670:CDS
GACAGATGTTAATGTTGTTG+TGG 0.529667 7_2:+65437158 Msa1069670:five_prime_UTR
AGAACAAGTTCTTTAACTGA+TGG 0.530111 7_2:+65438968 Msa1069670:CDS
TTCAGATGCCGACGAGGGAA+AGG 0.531155 7_2:+65442646 Msa1069670:CDS
AGTGGCAGATTCGGTGTCAT+TGG 0.531398 7_2:-65439044 None:intergenic
CCGAGGGGTGACAACGAAAG+AGG 0.532056 7_2:-65439466 None:intergenic
TGAGTGGACTTTCAGTCAGA+AGG 0.536067 7_2:+65439785 Msa1069670:CDS
ATCATGACAACCCGTGTAGT+GGG 0.536673 7_2:+65442207 Msa1069670:CDS
GATCTTCAAACTGTGGACAT+TGG 0.537193 7_2:-65438855 None:intergenic
TTCAGGAAATCTAGGACCGA+GGG 0.537725 7_2:-65439482 None:intergenic
ATGCTATTGGCCTTTACTTG+AGG 0.538301 7_2:+65444349 Msa1069670:three_prime_UTR
GGCTGGATTGGACATGGAAG+GGG 0.539426 7_2:+65442571 Msa1069670:CDS
AGGCTGGATTGGACATGGAA+GGG 0.543736 7_2:+65442570 Msa1069670:CDS
TGCTTCCAAAACTGAACGGA+GGG 0.546214 7_2:+65438904 Msa1069670:CDS
AAATAGAGGCTTCATATCCC+AGG 0.546921 7_2:+65439348 Msa1069670:CDS
CTTCTTATTATCTTGTGCAG+TGG 0.547056 7_2:-65439203 None:intergenic
AACATTATCATTCTTAACAA+GGG 0.548514 7_2:-65439173 None:intergenic
TCAAAGAGTTCTAACAGTGC+TGG 0.548643 7_2:+65442449 Msa1069670:CDS
AAACCGACAACCCTGGAAGC+AGG 0.550114 7_2:-65438935 None:intergenic
CTATGTTATGTTTATATCAG+AGG 0.550580 7_2:-65438279 None:intergenic
GATTTGAGTGACATGCCAAT+TGG 0.552113 7_2:+65440832 Msa1069670:CDS
AATTACAACATCAACTGCAT+CGG 0.553363 7_2:-65442243 None:intergenic
TTGCAAAAGAATGTGTGAAG+AGG 0.553725 7_2:-65440805 None:intergenic
CACCCATTTCTAATTCTGCA+AGG 0.554901 7_2:+65439749 Msa1069670:CDS
TTATGCATCCATAGATCTTG+CGG 0.558647 7_2:+65440118 Msa1069670:CDS
AGTTCAACCGGTTTGGACAG+TGG 0.559482 7_2:+65442152 Msa1069670:CDS
GAGGCCAACTTCTGAAACGA+GGG 0.559815 7_2:+65440165 Msa1069670:CDS
AATCATGACAACCCGTGTAG+TGG 0.559925 7_2:+65442206 Msa1069670:CDS
AAGGCTGGATTGGACATGGA+AGG 0.560734 7_2:+65442569 Msa1069670:CDS
TCCCAAGGTTGAATTGCAGA+AGG 0.561224 7_2:+65437364 Msa1069670:five_prime_UTR
AATGAAAGGAAGAATTCAGC+TGG 0.561386 7_2:+65440235 Msa1069670:CDS
AATCACCTTTGAAATGACTC+GGG 0.564625 7_2:-65439114 None:intergenic
GAATCACCTTTGAAATGACT+CGG 0.566315 7_2:-65439115 None:intergenic
CATAGGATGCAGAAATAATG+AGG 0.570164 7_2:+65439144 Msa1069670:CDS
AGAAAAGGCTGGATTGGACA+TGG 0.570456 7_2:+65442565 Msa1069670:CDS
TACCGTGATCATCTGGTGAA+AGG 0.570721 7_2:+65438445 Msa1069670:five_prime_UTR
TGAATAGTGTAAACACTCAT+GGG 0.577406 7_2:+65438720 Msa1069670:CDS
TAACATTATCATTCTTAACA+AGG 0.577731 7_2:-65439174 None:intergenic
GATTGGACATGGAAGGGGAA+CGG 0.579510 7_2:+65442576 Msa1069670:CDS
AGGTGGAAACAGAAGAATCA+GGG 0.580400 7_2:-65437407 None:intergenic
TGATTCAAAACCGACAACCC+TGG 0.581707 7_2:-65438942 None:intergenic
TGGACAGTGGAAATGACAAA+GGG 0.582026 7_2:+65442165 Msa1069670:CDS
CACTGCACAAGATAATAAGA+AGG 0.585137 7_2:+65439204 Msa1069670:CDS
AGAAAACATGTGATGAATCA+GGG 0.586761 7_2:+65442408 Msa1069670:CDS
ATTCATGCTGCTTATAGAAG+AGG 0.587032 7_2:-65438702 None:intergenic
CGTTTCCGTATACCAATGAA+AGG 0.592221 7_2:+65440221 Msa1069670:CDS
TTCCTTTCACCAGATGATCA+CGG 0.593746 7_2:-65438447 None:intergenic
TCGCTTCCTGACCAATGAAG+TGG 0.594131 7_2:-65439062 None:intergenic
CTGCTTCCAAAACTGAACGG+AGG 0.595798 7_2:+65438903 Msa1069670:CDS
TTATTGCAATGTCTCAAACA+TGG 0.596189 7_2:+65438253 Msa1069670:five_prime_UTR
TATGCATACCTTTCCCTCGT+CGG 0.599027 7_2:-65442654 None:intergenic
GAAGCCCAAACAATCCATAG+TGG 0.599274 7_2:-65438147 None:intergenic
GAAAGAATGAAAATGGCCAC+AGG 0.599520 7_2:+65439502 Msa1069670:CDS
GCATTACTTCCCCACTACAC+GGG 0.602906 7_2:-65442217 None:intergenic
GTATATCTGTAGAAAATCGA+TGG 0.605410 7_2:+65439993 Msa1069670:intron
CCCAAGGTTGAATTGCAGAA+GGG 0.607886 7_2:+65437365 Msa1069670:five_prime_UTR
AGGTTCACTAGAAGTTTGAG+TGG 0.609481 7_2:+65439769 Msa1069670:CDS
TTGAATTGATCTTCAAACTG+TGG 0.610582 7_2:-65438862 None:intergenic
TGGGTTGTTGAAATTGCAGA+AGG 0.610753 7_2:-65437266 None:intergenic
CAATTTGATAAGGACCAAGA+AGG 0.612047 7_2:-65439259 None:intergenic
TTGGACAGTGGAAATGACAA+AGG 0.613787 7_2:+65442164 Msa1069670:CDS
GTCTATTTGGCAGATGAATG+TGG 0.614657 7_2:+65444217 Msa1069670:intron
AACGAAAGAGGAGAGCTCAC+AGG 0.615548 7_2:-65439454 None:intergenic
CTCTCCCCGAGTCATTTCAA+AGG 0.616962 7_2:+65439109 Msa1069670:CDS
TCATGCTGCTTATAGAAGAG+GGG 0.617476 7_2:-65438700 None:intergenic
TTTCTGCTTCCAAAACTGAA+CGG 0.620837 7_2:+65438900 Msa1069670:CDS
AGCATGTAACTATATACAAG+AGG 0.620915 7_2:-65444331 None:intergenic
GGTGACACTCCTGCATCCTG+TGG 0.622325 7_2:-65439518 None:intergenic
AAGGGCAGATAAAGCGAAGG+TGG 0.626406 7_2:-65442490 None:intergenic
GGTGGAGAGCATAACGAAGT+GGG 0.628379 7_2:-65442472 None:intergenic
AAGTATTTACAGGAGGAAGA+GGG 0.628616 7_2:-65444398 None:intergenic
AATAGAGGCTTCATATCCCA+GGG 0.631162 7_2:+65439349 Msa1069670:CDS
ATCAATGTGATCCCTCAGCA+AGG 0.634775 7_2:-65438494 None:intergenic
ATTGTTGAAGTATTTACAGG+AGG 0.636960 7_2:-65444405 None:intergenic
TTTCTAATGAGGCATTCTTG+GGG 0.639052 7_2:-65438781 None:intergenic
GTTTAACTGATGAATGTGAG+AGG 0.640480 7_2:+65442363 Msa1069670:CDS
CGTCATTCAGATGCCGACGA+GGG 0.641258 7_2:+65442641 Msa1069670:CDS
GCGTCATTCAGATGCCGACG+AGG 0.641458 7_2:+65442640 Msa1069670:CDS
AGGTGGAGAGCATAACGAAG+TGG 0.642212 7_2:-65442473 None:intergenic
GCAAGTGGCTATGTGTGCGG+TGG 0.645936 7_2:+65437077 None:intergenic
AACATGTAAGACCTTGCTGA+GGG 0.646250 7_2:+65438483 Msa1069670:five_prime_UTR
TCATGACAACCCGTGTAGTG+GGG 0.648256 7_2:+65442208 Msa1069670:CDS
GGAGGCCAACTTCTGAAACG+AGG 0.650557 7_2:+65440164 Msa1069670:CDS
GAACATGTAAGACCTTGCTG+AGG 0.656132 7_2:+65438482 Msa1069670:five_prime_UTR
GCCGTGTTAAGTATTTCTGG+GGG 0.663682 7_2:+65440023 Msa1069670:CDS
CAAGTGGCTATGTGTGCGGT+GGG 0.663835 7_2:+65437078 None:intergenic
GCATGTAACTATATACAAGA+GGG 0.664324 7_2:-65444330 None:intergenic
ATCACCTTTGAAATGACTCG+GGG 0.678625 7_2:-65439113 None:intergenic
TACAAATCAGAGAAACACAA+AGG 0.679254 7_2:+65442277 Msa1069670:CDS
CTTAAGGGAATCAAGTGTTG+TGG 0.681377 7_2:+65439399 Msa1069670:CDS
GAAAAGGGCAGATAAAGCGA+AGG 0.690630 7_2:-65442493 None:intergenic
GGGGAGAGCATACTGCTCAG+TGG 0.691084 7_2:-65439094 None:intergenic
TCGGCATCTGAATGACGCTG+AGG 0.695206 7_2:-65442635 None:intergenic
GGTGTTGATTCTAGAGAACG+TGG 0.702836 7_2:-65439730 None:intergenic
AAAGCAAGTGGCTATGTGTG+CGG 0.712150 7_2:+65437074 None:intergenic
GGGTTTGCATCCGAAAACTG+AGG 0.716204 7_2:-65438680 None:intergenic
TGTGTGCGGTGGGAATGATG+AGG 0.731591 7_2:+65437088 Msa1069670:five_prime_UTR
GTTGTGGTCAGACCTCAAAG+TGG 0.734315 7_2:+65439415 Msa1069670:CDS
TCAGGAAATCTAGGACCGAG+GGG 0.735298 7_2:-65439481 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAATAATTATAATTAT+AGG - chr7_2:65441294-65441313 None:intergenic 0.0%
!!! TTTAATTTTTTCTTTATGTT+TGG + chr7_2:65437689-65437708 Msa1069670:intron 10.0%
!! AAATATTAAATCTTATTATG+GGG - chr7_2:65440960-65440979 None:intergenic 10.0%
!! TATAATTATTTATTATTGTC+AGG + chr7_2:65441299-65441318 Msa1069670:intron 10.0%
!!! AAATTATTTTTCAATCATTT+TGG - chr7_2:65443470-65443489 None:intergenic 10.0%
!! AAAATGATTGAAAAATAATT+TGG + chr7_2:65443469-65443488 Msa1069670:intron 10.0%
!!! GTTTTTTTAAACATAAACAT+TGG + chr7_2:65437136-65437155 Msa1069670:five_prime_UTR 15.0%
!!! AAAATCAATTTTTTTGTTGT+GGG - chr7_2:65437288-65437307 None:intergenic 15.0%
!!! AAAAATCAATTTTTTTGTTG+TGG - chr7_2:65437289-65437308 None:intergenic 15.0%
!! AAAGATCAAATTAAACAAAA+GGG - chr7_2:65437318-65437337 None:intergenic 15.0%
!! AAAAGATCAAATTAAACAAA+AGG - chr7_2:65437319-65437338 None:intergenic 15.0%
!!! TTTTTCTATATTTCTTTTTC+AGG + chr7_2:65437817-65437836 Msa1069670:intron 15.0%
!! TATTAAAATTGAACACTTAA+GGG + chr7_2:65439384-65439403 Msa1069670:CDS 15.0%
!!! TGTTGATAATATAAAAATGT+AGG + chr7_2:65441504-65441523 Msa1069670:intron 15.0%
!! ATACTAATTATTTAGTAGAT+AGG + chr7_2:65441530-65441549 Msa1069670:intron 15.0%
!! AAGAAAAATATGTAAAACTT+TGG - chr7_2:65442699-65442718 None:intergenic 15.0%
!! ATGATTTATGATATAACATT+TGG + chr7_2:65443845-65443864 Msa1069670:intron 15.0%
!! AACAATGTCAATAATTTAAT+GGG + chr7_2:65444422-65444441 Msa1069670:three_prime_UTR 15.0%
!!! TAGATTTTAAAAGAATGTAA+TGG + chr7_2:65444614-65444633 Msa1069670:three_prime_UTR 15.0%
!!! TAATTTGATCTTTTCTTTGT+TGG + chr7_2:65437325-65437344 Msa1069670:five_prime_UTR 20.0%
!!! AATTTGATCTTTTCTTTGTT+GGG + chr7_2:65437326-65437345 Msa1069670:five_prime_UTR 20.0%
!! AATAAATGGCATTAAACAAA+AGG - chr7_2:65437730-65437749 None:intergenic 20.0%
!! AACTTCATATTCATTAAACT+TGG - chr7_2:65437923-65437942 None:intergenic 20.0%
!!! TCTTCTTTTTTTATCGTTTT+AGG + chr7_2:65438545-65438564 Msa1069670:five_prime_UTR 20.0%
!! AACATTATCATTCTTAACAA+GGG - chr7_2:65439176-65439195 None:intergenic 20.0%
!! TAACATTATCATTCTTAACA+AGG - chr7_2:65439177-65439196 None:intergenic 20.0%
!!! AAGTGTTCAATTTTAATAGT+TGG - chr7_2:65439382-65439401 None:intergenic 20.0%
!! CTATTAAAATTGAACACTTA+AGG + chr7_2:65439383-65439402 Msa1069670:CDS 20.0%
!!! TCTAATTCATGTGATATTTT+AGG + chr7_2:65439598-65439617 Msa1069670:CDS 20.0%
!! TTACTTTGTGTAAATGTTAA+GGG - chr7_2:65440370-65440389 None:intergenic 20.0%
!!! TACTATCCTTAGATATTTTT+TGG + chr7_2:65440397-65440416 Msa1069670:intron 20.0%
!!! ACTATCCTTAGATATTTTTT+GGG + chr7_2:65440398-65440417 Msa1069670:intron 20.0%
!!! TTTTGTGAAGAAAAAAAAAG+AGG - chr7_2:65440638-65440657 None:intergenic 20.0%
!!! CCAAAGATATTTTTCTTTAT+AGG - chr7_2:65441215-65441234 None:intergenic 20.0%
!! CCTATAAAGAAAAATATCTT+TGG + chr7_2:65441212-65441231 Msa1069670:intron 20.0%
!!! TGATTTGCAGAATAAATAAA+TGG + chr7_2:65441241-65441260 Msa1069670:intron 20.0%
!! CCAAAGTAAAAAAAATAAAG+TGG - chr7_2:65441344-65441363 None:intergenic 20.0%
!!! CCACTTTATTTTTTTTACTT+TGG + chr7_2:65441341-65441360 Msa1069670:intron 20.0%
!! TTTATATTATCAACAGTACA+TGG - chr7_2:65441499-65441518 None:intergenic 20.0%
!!! TCTATAATCTTCATTTTCAA+CGG - chr7_2:65441881-65441900 None:intergenic 20.0%
!!! TAAAACTATTGAAAGCATTA+TGG + chr7_2:65442727-65442746 Msa1069670:intron 20.0%
!!! TACAAGAAAACGTATAATTT+TGG - chr7_2:65443149-65443168 None:intergenic 20.0%
!! ATTCTGATTTATAAGAACAA+TGG + chr7_2:65443345-65443364 Msa1069670:intron 20.0%
!! AAATAACTAGTGTATATTAC+AGG + chr7_2:65443984-65444003 Msa1069670:intron 20.0%
!! AATAACTAGTGTATATTACA+GGG + chr7_2:65443985-65444004 Msa1069670:intron 20.0%
!! AAAAGTTATTCAATCAATGT+TGG + chr7_2:65444012-65444031 Msa1069670:intron 20.0%
!!! AGTGTATTTTTTAGTATTGT+TGG + chr7_2:65444056-65444075 Msa1069670:intron 20.0%
!! CAACAATGTCAATAATTTAA+TGG + chr7_2:65444421-65444440 Msa1069670:three_prime_UTR 20.0%
!!! TAATGGCAAGATTTTTTAAA+AGG + chr7_2:65444631-65444650 Msa1069670:three_prime_UTR 20.0%
! AAATGAAGAAGATGAGATAA+GGG - chr7_2:65437237-65437256 None:intergenic 25.0%
! AAAATGAAGAAGATGAGATA+AGG - chr7_2:65437238-65437257 None:intergenic 25.0%
! TTGATCCTATTGAATCTTAA+TGG + chr7_2:65437447-65437466 Msa1069670:intron 25.0%
! TTAGTCCATTAAGATTCAAT+AGG - chr7_2:65437455-65437474 None:intergenic 25.0%
!!! TTCATTGATTTTGTTCTTTC+AGG + chr7_2:65437484-65437503 Msa1069670:intron 25.0%
!!! TCATTGATTTTGTTCTTTCA+GGG + chr7_2:65437485-65437504 Msa1069670:intron 25.0%
!!! TTTCTTGTTATTGCATAAAG+AGG + chr7_2:65437558-65437577 Msa1069670:intron 25.0%
!!! TTCTTGTTATTGCATAAAGA+GGG + chr7_2:65437559-65437578 Msa1069670:intron 25.0%
!!! AGAGGGTTTATAAGTTTTTT+TGG + chr7_2:65437576-65437595 Msa1069670:intron 25.0%
! GCTGAATTAAGAACAATAAA+TGG - chr7_2:65437744-65437763 None:intergenic 25.0%
!!! TCTATATTTCTTTTTCAGGT+AGG + chr7_2:65437821-65437840 Msa1069670:intron 25.0%
! CAATCAAATTGAAGAAAATG+TGG - chr7_2:65437874-65437893 None:intergenic 25.0%
!!! TGAACTTTTGTTTCACTTTT+AGG + chr7_2:65438109-65438128 Msa1069670:intron 25.0%
!! CAATAATCATTTCTTTTGCA+GGG - chr7_2:65438239-65438258 None:intergenic 25.0%
! CTATGTTATGTTTATATCAG+AGG - chr7_2:65438282-65438301 None:intergenic 25.0%
! TTCCAATTGTAGTTGTTAAT+AGG + chr7_2:65438348-65438367 Msa1069670:five_prime_UTR 25.0%
! TACCTATTAACAACTACAAT+TGG - chr7_2:65438353-65438372 None:intergenic 25.0%
! AATGTCTTATCAGAAACATT+TGG - chr7_2:65438809-65438828 None:intergenic 25.0%
!! GTTTCTGATAAGACATTTTA+TGG + chr7_2:65438812-65438831 Msa1069670:CDS 25.0%
! GATAATAAGAAGGCAAATAT+TGG + chr7_2:65439214-65439233 Msa1069670:CDS 25.0%
! ATTTCCTGAAAGAATGAAAA+TGG + chr7_2:65439495-65439514 Msa1069670:CDS 25.0%
! ATTGCAATTCTTTATCTCTT+CGG - chr7_2:65439542-65439561 None:intergenic 25.0%
! AATTCTTTATCAAACAGGTT+TGG + chr7_2:65440143-65440162 Msa1069670:CDS 25.0%
! TAGAAAAGATGATTCACAAA+TGG + chr7_2:65440190-65440209 Msa1069670:CDS 25.0%
! CTTACTTTGTGTAAATGTTA+AGG - chr7_2:65440371-65440390 None:intergenic 25.0%
! CTTAACATTTACACAAAGTA+AGG + chr7_2:65440369-65440388 Msa1069670:intron 25.0%
! TTTCACCCAAAAAATATCTA+AGG - chr7_2:65440406-65440425 None:intergenic 25.0%
! TAACTAAAAGTTCATTCTCT+TGG - chr7_2:65440450-65440469 None:intergenic 25.0%
! TATGTTTAGTGAGAAAGTTT+GGG + chr7_2:65440547-65440566 Msa1069670:intron 25.0%
! AATCTCTGACTAAATTGATA+TGG + chr7_2:65440884-65440903 Msa1069670:intron 25.0%
! TTTATGACATGATTTCCATT+TGG - chr7_2:65441033-65441052 None:intergenic 25.0%
!!! TATATTTCTTTTTTCGTGAG+AGG - chr7_2:65441107-65441126 None:intergenic 25.0%
! TAAAGAAAAATATCTTTGGC+AGG + chr7_2:65441216-65441235 Msa1069670:intron 25.0%
! CTAATTATTTAGTAGATAGG+AGG + chr7_2:65441533-65441552 Msa1069670:intron 25.0%
!!! AATACTTTGGAGTTCAAAAA+TGG - chr7_2:65441749-65441768 None:intergenic 25.0%
!! TTTCTTTTGTACAGCATAAT+TGG - chr7_2:65441816-65441835 None:intergenic 25.0%
! TATGCTGTACAAAAGAAAAA+TGG + chr7_2:65441818-65441837 Msa1069670:intron 25.0%
!! TATAATCTTCATTTTCAACG+GGG - chr7_2:65441879-65441898 None:intergenic 25.0%
!! CTATAATCTTCATTTTCAAC+GGG - chr7_2:65441880-65441899 None:intergenic 25.0%
! AATGAAGATTATAGACTTCA+CGG + chr7_2:65441886-65441905 Msa1069670:intron 25.0%
! AAAGTCATATTGCATTTACT+TGG + chr7_2:65442026-65442045 Msa1069670:intron 25.0%
!!! TTGAACTATTTTTTGACTGA+GGG - chr7_2:65442139-65442158 None:intergenic 25.0%
! CTACTTGTGTAATGATTTAA+AGG + chr7_2:65442604-65442623 Msa1069670:CDS 25.0%
! ACATTAAACCAAAACTGAAA+AGG - chr7_2:65442791-65442810 None:intergenic 25.0%
! CGAAAACAAACAGTTTATAA+TGG - chr7_2:65442837-65442856 None:intergenic 25.0%
! TGCATCAAATGAAATTTCAA+AGG - chr7_2:65442932-65442951 None:intergenic 25.0%
! AGCATAAGAGAATTAAACTT+AGG + chr7_2:65443388-65443407 Msa1069670:intron 25.0%
! TAGGAGCTATACTAAAATTA+TGG + chr7_2:65443407-65443426 Msa1069670:intron 25.0%
! AGGAGCTATACTAAAATTAT+GGG + chr7_2:65443408-65443427 Msa1069670:intron 25.0%
! TATACTAAAATTATGGGGAA+GGG + chr7_2:65443414-65443433 Msa1069670:intron 25.0%
!!! AAATAATTTGGTTTTATGCC+TGG + chr7_2:65443481-65443500 Msa1069670:intron 25.0%
!!! AATAATTTGGTTTTATGCCT+GGG + chr7_2:65443482-65443501 Msa1069670:intron 25.0%
! TTAACATAAAACCTATGTTG+GGG - chr7_2:65443596-65443615 None:intergenic 25.0%
! CTTAACATAAAACCTATGTT+GGG - chr7_2:65443597-65443616 None:intergenic 25.0%
! ATCCTTAACAGCTAAAATAT+AGG - chr7_2:65443647-65443666 None:intergenic 25.0%
! AACTATAGGCAAAACTATTA+AGG + chr7_2:65443795-65443814 Msa1069670:intron 25.0%
! AATATGGTTCATGTATTACA+GGG - chr7_2:65443875-65443894 None:intergenic 25.0%
! TCTAAAGACTAAAACCAATA+TGG - chr7_2:65443891-65443910 None:intergenic 25.0%
! AGAAACAACCTTTATATTTC+AGG + chr7_2:65443956-65443975 Msa1069670:intron 25.0%
! GAAACAACCTTTATATTTCA+GGG + chr7_2:65443957-65443976 Msa1069670:intron 25.0%
! AAACAACCTTTATATTTCAG+GGG + chr7_2:65443958-65443977 Msa1069670:intron 25.0%
! TCTATATTTGAACAGAATGT+TGG + chr7_2:65444094-65444113 Msa1069670:intron 25.0%
! ATATATTAGTGTGCATTGTT+TGG + chr7_2:65444161-65444180 Msa1069670:intron 25.0%
! TGTATATAGTTACATGCTAT+TGG + chr7_2:65444336-65444355 Msa1069670:three_prime_UTR 25.0%
ACAGATGTTAATGTTGTTGT+GGG + chr7_2:65437159-65437178 Msa1069670:five_prime_UTR 30.0%
! CAAATTAAACAAAAGGGTGT+TGG - chr7_2:65437312-65437331 None:intergenic 30.0%
TCGTTAATTATTTGATCCCA+AGG + chr7_2:65437349-65437368 Msa1069670:five_prime_UTR 30.0%
TTTGTTCTTTCAGGGTTTAA+AGG + chr7_2:65437493-65437512 Msa1069670:intron 30.0%
TTGTTCTTTCAGGGTTTAAA+GGG + chr7_2:65437494-65437513 Msa1069670:intron 30.0%
! GCAATAATCATTTCTTTTGC+AGG - chr7_2:65438240-65438259 None:intergenic 30.0%
TTATTGCAATGTCTCAAACA+TGG + chr7_2:65438253-65438272 Msa1069670:five_prime_UTR 30.0%
ACATAGTATGAAGTTCTTGT+AGG + chr7_2:65438296-65438315 Msa1069670:five_prime_UTR 30.0%
! TAGGTTTGGAATCATTTGAT+TGG + chr7_2:65438315-65438334 Msa1069670:five_prime_UTR 30.0%
AGTGACTTAAGTATTAGAGA+TGG + chr7_2:65438586-65438605 Msa1069670:exon 30.0%
GTGACTTAAGTATTAGAGAT+GGG + chr7_2:65438587-65438606 Msa1069670:exon 30.0%
! TGATGAAAATGTCGAACTTT+TGG + chr7_2:65438637-65438656 Msa1069670:CDS 30.0%
! GATGAAAATGTCGAACTTTT+GGG + chr7_2:65438638-65438657 Msa1069670:CDS 30.0%
ATGAATAGTGTAAACACTCA+TGG + chr7_2:65438719-65438738 Msa1069670:CDS 30.0%
TGAATAGTGTAAACACTCAT+GGG + chr7_2:65438720-65438739 Msa1069670:CDS 30.0%
! ATTTTCAAATGAGGATCCAA+GGG - chr7_2:65438759-65438778 None:intergenic 30.0%
! AATTTTCAAATGAGGATCCA+AGG - chr7_2:65438760-65438779 None:intergenic 30.0%
! ATTTCTAATGAGGCATTCTT+GGG - chr7_2:65438785-65438804 None:intergenic 30.0%
AACATTTGGCATTTCTAATG+AGG - chr7_2:65438795-65438814 None:intergenic 30.0%
TTGAATTGATCTTCAAACTG+TGG - chr7_2:65438865-65438884 None:intergenic 30.0%
AGAACAAGTTCTTTAACTGA+TGG + chr7_2:65438968-65438987 Msa1069670:CDS 30.0%
AGATACTACCAAAAGAAGAA+TGG - chr7_2:65439021-65439040 None:intergenic 30.0%
!! GAATCCATTTTTCAAACTGA+TGG + chr7_2:65439313-65439332 Msa1069670:CDS 30.0%
TTCATTCTTTCAGGAAATCT+AGG - chr7_2:65439493-65439512 None:intergenic 30.0%
AACCTTGCAGAATTAGAAAT+GGG - chr7_2:65439754-65439773 None:intergenic 30.0%
CATAGATACAAACCTTAGTA+TGG - chr7_2:65439867-65439886 None:intergenic 30.0%
TTGTGCATGATTCTTTACTT+TGG + chr7_2:65439918-65439937 Msa1069670:intron 30.0%
GTATATCTGTAGAAAATCGA+TGG + chr7_2:65439993-65440012 Msa1069670:intron 30.0%
TTCTTCCTTTCATTGGTATA+CGG - chr7_2:65440229-65440248 None:intergenic 30.0%
CAAACTTTCTCACTAAACAT+AGG - chr7_2:65440548-65440567 None:intergenic 30.0%
CTATGTTTAGTGAGAAAGTT+TGG + chr7_2:65440546-65440565 Msa1069670:intron 30.0%
AAGGAAAGGTTTGATGTAAT+TGG + chr7_2:65440580-65440599 Msa1069670:intron 30.0%
AGGAAAGGTTTGATGTAATT+GGG + chr7_2:65440581-65440600 Msa1069670:intron 30.0%
AGTAATCAAAGGAAAGAGTA+AGG - chr7_2:65440753-65440772 None:intergenic 30.0%
AATCTTACTTTGGTACCAAT+TGG - chr7_2:65440850-65440869 None:intergenic 30.0%
ATTGGTACCAAAGTAAGATT+TGG + chr7_2:65440850-65440869 Msa1069670:intron 30.0%
CATATTGCCAAATCTTACTT+TGG - chr7_2:65440860-65440879 None:intergenic 30.0%
CAAAGTAAGATTTGGCAATA+TGG + chr7_2:65440858-65440877 Msa1069670:intron 30.0%
! ATTATGGGGTTCTACATTTT+TGG - chr7_2:65440946-65440965 None:intergenic 30.0%
TGACTGTAAATGTAATGACA+AGG + chr7_2:65441130-65441149 Msa1069670:intron 30.0%
GACTGTAAATGTAATGACAA+GGG + chr7_2:65441131-65441150 Msa1069670:intron 30.0%
ACTGTAAATGTAATGACAAG+GGG + chr7_2:65441132-65441151 Msa1069670:intron 30.0%
!!! TGTTCTACTGCTATTTCTTT+TGG + chr7_2:65441155-65441174 Msa1069670:intron 30.0%
TCTCATATGAGTGTTAATGA+GGG + chr7_2:65441366-65441385 Msa1069670:intron 30.0%
TTCTAACACTGATAAACAGA+GGG - chr7_2:65441774-65441793 None:intergenic 30.0%
!! AAAAATGGCTTTAGAATTGC+TGG + chr7_2:65441833-65441852 Msa1069670:intron 30.0%
!!! TGAACTATTTTTTGACTGAG+GGG - chr7_2:65442138-65442157 None:intergenic 30.0%
!!! GTTGAACTATTTTTTGACTG+AGG - chr7_2:65442140-65442159 None:intergenic 30.0%
CAGTCAAAAAATAGTTCAAC+CGG + chr7_2:65442140-65442159 Msa1069670:CDS 30.0%
AAAAAATAGTTCAACCGGTT+TGG + chr7_2:65442145-65442164 Msa1069670:CDS 30.0%
! TCATGATTCTTTTGTACTGT+TGG - chr7_2:65442194-65442213 None:intergenic 30.0%
AATTACAACATCAACTGCAT+CGG - chr7_2:65442246-65442265 None:intergenic 30.0%
TACAAATCAGAGAAACACAA+AGG + chr7_2:65442277-65442296 Msa1069670:CDS 30.0%
! GGAGAATTTTCTAAACAAAG+AGG + chr7_2:65442310-65442329 Msa1069670:CDS 30.0%
AGAAAACATGTGATGAATCA+GGG + chr7_2:65442408-65442427 Msa1069670:CDS 30.0%
!!! TACTGGTCTTTTTAGGAAAA+GGG - chr7_2:65442511-65442530 None:intergenic 30.0%
ATTAAGTTCTCTTCCAGAAA+AGG + chr7_2:65442550-65442569 Msa1069670:CDS 30.0%
GTATGCATATGCTTATATTG+TGG + chr7_2:65442668-65442687 Msa1069670:intron 30.0%
!!! ATGCTTTCAATAGTTTTAGC+AGG - chr7_2:65442725-65442744 None:intergenic 30.0%
! TACTTGATCCTTTTCAGTTT+TGG + chr7_2:65442780-65442799 Msa1069670:intron 30.0%
!!! TTTTTTCTGTTTACTTCCAC+TGG - chr7_2:65442863-65442882 None:intergenic 30.0%
GAAAAAACTTATTGCTCCTT+GGG - chr7_2:65443040-65443059 None:intergenic 30.0%
AGAAAAAACTTATTGCTCCT+TGG - chr7_2:65443041-65443060 None:intergenic 30.0%
GCAATGAATACCAAGTATAA+TGG + chr7_2:65443179-65443198 Msa1069670:intron 30.0%
!! ATACCAAGTATAATGGATTG+TGG + chr7_2:65443186-65443205 Msa1069670:intron 30.0%
ATAAAATGTCGAGTGAATAG+AGG + chr7_2:65443310-65443329 Msa1069670:intron 30.0%
TAAAATGTCGAGTGAATAGA+GGG + chr7_2:65443311-65443330 Msa1069670:intron 30.0%
GGAGCTATACTAAAATTATG+GGG + chr7_2:65443409-65443428 Msa1069670:intron 30.0%
CTATACTAAAATTATGGGGA+AGG + chr7_2:65443413-65443432 Msa1069670:intron 30.0%
GCTTAACATAAAACCTATGT+TGG - chr7_2:65443598-65443617 None:intergenic 30.0%
!!! TGCCTATATTTTAGCTGTTA+AGG + chr7_2:65443642-65443661 Msa1069670:intron 30.0%
AAAACTATTAAGGAAGACTG+AGG + chr7_2:65443805-65443824 Msa1069670:intron 30.0%
CAATATGGTTCATGTATTAC+AGG - chr7_2:65443876-65443895 None:intergenic 30.0%
CTGTAATACATGAACCATAT+TGG + chr7_2:65443874-65443893 Msa1069670:intron 30.0%
! TTTTAGCCCCTGAAATATAA+AGG - chr7_2:65443967-65443986 None:intergenic 30.0%
CTTGTTAGTCCTGATAATTT+CGG - chr7_2:65444038-65444057 None:intergenic 30.0%
GCATGTAACTATATACAAGA+GGG - chr7_2:65444333-65444352 None:intergenic 30.0%
AGCATGTAACTATATACAAG+AGG - chr7_2:65444334-65444353 None:intergenic 30.0%
! ATTGTTGAAGTATTTACAGG+AGG - chr7_2:65444408-65444427 None:intergenic 30.0%
! GACATTGTTGAAGTATTTAC+AGG - chr7_2:65444411-65444430 None:intergenic 30.0%
! CACCCTTTGAATTATTTTCT+AGG + chr7_2:65444526-65444545 Msa1069670:three_prime_UTR 30.0%
CGCCTAGAAAATAATTCAAA+GGG - chr7_2:65444531-65444550 None:intergenic 30.0%
! CCTTTGAATTATTTTCTAGG+CGG + chr7_2:65444529-65444548 Msa1069670:three_prime_UTR 30.0%
GACAGATGTTAATGTTGTTG+TGG + chr7_2:65437158-65437177 Msa1069670:five_prime_UTR 35.0%
GAAGATGAGATAAGGGTTAA+GGG - chr7_2:65437230-65437249 None:intergenic 35.0%
AGAAGATGAGATAAGGGTTA+AGG - chr7_2:65437231-65437250 None:intergenic 35.0%
TAGATGATAGCTACAGTTTG+AGG + chr7_2:65437640-65437659 Msa1069670:intron 35.0%
AGATGATAGCTACAGTTTGA+GGG + chr7_2:65437641-65437660 Msa1069670:intron 35.0%
TCCTTCTGAATTTGTGATCT+CGG + chr7_2:65438069-65438088 Msa1069670:intron 35.0%
! ATCATCCACTATGGATTGTT+TGG + chr7_2:65438142-65438161 Msa1069670:five_prime_UTR 35.0%
! TCATCCACTATGGATTGTTT+GGG + chr7_2:65438143-65438162 Msa1069670:five_prime_UTR 35.0%
ATATATCCAAGAACTGCAAC+TGG - chr7_2:65438207-65438226 None:intergenic 35.0%
GTATGAAGTTCTTGTAGGTT+TGG + chr7_2:65438301-65438320 Msa1069670:five_prime_UTR 35.0%
TAGTTGTTAGCTGATGTTGT+AGG + chr7_2:65438419-65438438 Msa1069670:five_prime_UTR 35.0%
! TTTTCATCAGCTTCACTTGA+TGG - chr7_2:65438626-65438645 None:intergenic 35.0%
! TTCATGCTGCTTATAGAAGA+GGG - chr7_2:65438704-65438723 None:intergenic 35.0%
! ATTCATGCTGCTTATAGAAG+AGG - chr7_2:65438705-65438724 None:intergenic 35.0%
! CTTGGGGAAATTTTCAAATG+AGG - chr7_2:65438768-65438787 None:intergenic 35.0%
! TTTCTAATGAGGCATTCTTG+GGG - chr7_2:65438784-65438803 None:intergenic 35.0%
! CATTTCTAATGAGGCATTCT+TGG - chr7_2:65438786-65438805 None:intergenic 35.0%
TTTCTGCTTCCAAAACTGAA+CGG + chr7_2:65438900-65438919 Msa1069670:CDS 35.0%
! GCAAATCTCCATTCTTCTTT+TGG + chr7_2:65439010-65439029 Msa1069670:CDS 35.0%
!! AATCACCTTTGAAATGACTC+GGG - chr7_2:65439117-65439136 None:intergenic 35.0%
!! GAATCACCTTTGAAATGACT+CGG - chr7_2:65439118-65439137 None:intergenic 35.0%
AAAGGTGATTCTCTTGACAT+AGG + chr7_2:65439127-65439146 Msa1069670:CDS 35.0%
CATAGGATGCAGAAATAATG+AGG + chr7_2:65439144-65439163 Msa1069670:CDS 35.0%
CTTCTTATTATCTTGTGCAG+TGG - chr7_2:65439206-65439225 None:intergenic 35.0%
CACTGCACAAGATAATAAGA+AGG + chr7_2:65439204-65439223 Msa1069670:CDS 35.0%
CAATTTGATAAGGACCAAGA+AGG - chr7_2:65439262-65439281 None:intergenic 35.0%
CTGCTCAAAGCAATTTGATA+AGG - chr7_2:65439272-65439291 None:intergenic 35.0%
! TTGCTTTGAGCAGAAAAACA+TGG + chr7_2:65439279-65439298 Msa1069670:CDS 35.0%
AGGACCATCAGTTTGAAAAA+TGG - chr7_2:65439320-65439339 None:intergenic 35.0%
!! AAGCCTCTATTTTCAAGCAA+AGG - chr7_2:65439340-65439359 None:intergenic 35.0%
AGATGGACAGAAATCTTTGA+AGG - chr7_2:65439680-65439699 None:intergenic 35.0%
GAACCTTGCAGAATTAGAAA+TGG - chr7_2:65439755-65439774 None:intergenic 35.0%
! TTTGAGGAGTCTCTTTTATC+TGG + chr7_2:65439823-65439842 Msa1069670:CDS 35.0%
TATGGTTTCCAGAAACAAAC+CGG - chr7_2:65439849-65439868 None:intergenic 35.0%
!! TGTTTCTGGAAACCATACTA+AGG + chr7_2:65439852-65439871 Msa1069670:CDS 35.0%
GAAAAGAAACAAGTATCCGT+AGG - chr7_2:65439971-65439990 None:intergenic 35.0%
TTGCCGTGTTAAGTATTTCT+GGG + chr7_2:65440021-65440040 Msa1069670:CDS 35.0%
AATGGAAGCTTCTGTGATTT+AGG - chr7_2:65440059-65440078 None:intergenic 35.0%
TCGACACTAGTAACAGAAAA+TGG - chr7_2:65440077-65440096 None:intergenic 35.0%
!! TTTTCTGTTACTAGTGTCGA+TGG + chr7_2:65440077-65440096 Msa1069670:CDS 35.0%
TTATGCATCCATAGATCTTG+CGG + chr7_2:65440118-65440137 Msa1069670:CDS 35.0%
CGGGAAATTCTTTATCAAAC+AGG + chr7_2:65440138-65440157 Msa1069670:CDS 35.0%
TCTTTATCAAACAGGTTTGG+AGG + chr7_2:65440146-65440165 Msa1069670:CDS 35.0%
CTTTCATTGGTATACGGAAA+CGG - chr7_2:65440223-65440242 None:intergenic 35.0%
AGCTGAATTCTTCCTTTCAT+TGG - chr7_2:65440236-65440255 None:intergenic 35.0%
AATGAAAGGAAGAATTCAGC+TGG + chr7_2:65440235-65440254 Msa1069670:CDS 35.0%
GACATTCATGTCAGATACAA+GGG - chr7_2:65440295-65440314 None:intergenic 35.0%
AGACATTCATGTCAGATACA+AGG - chr7_2:65440296-65440315 None:intergenic 35.0%
TCCATACAGATATAAGACGA+AGG - chr7_2:65440338-65440357 None:intergenic 35.0%
CACTAATATGTTTGGAAGAC+GGG - chr7_2:65440662-65440681 None:intergenic 35.0%
CCACTAATATGTTTGGAAGA+CGG - chr7_2:65440663-65440682 None:intergenic 35.0%
! TGAAGCACCACTAATATGTT+TGG - chr7_2:65440670-65440689 None:intergenic 35.0%
TTGCAAAAGAATGTGTGAAG+AGG - chr7_2:65440808-65440827 None:intergenic 35.0%
TTGGCATGTCAGAACATTTA+TGG - chr7_2:65440927-65440946 None:intergenic 35.0%
!!! TCTACTGCTATTTCTTTTGG+TGG + chr7_2:65441158-65441177 Msa1069670:intron 35.0%
!!! TATTTCTTTTGGTGGTGAGA+GGG + chr7_2:65441166-65441185 Msa1069670:intron 35.0%
CTCATTAACACTCATATGAG+AGG - chr7_2:65441367-65441386 None:intergenic 35.0%
CTCTCATATGAGTGTTAATG+AGG + chr7_2:65441365-65441384 Msa1069670:intron 35.0%
! TCTGAATGCTTTTGTAGATC+TGG + chr7_2:65441470-65441489 Msa1069670:intron 35.0%
!!! TGCTAGTTCTACTTTTTAGC+TGG + chr7_2:65441593-65441612 Msa1069670:intron 35.0%
!!! GCTAGTTCTACTTTTTAGCT+GGG + chr7_2:65441594-65441613 Msa1069670:intron 35.0%
!!! CTAGTTCTACTTTTTAGCTG+GGG + chr7_2:65441595-65441614 Msa1069670:intron 35.0%
ACATTGTATAAACCACAGAC+AGG - chr7_2:65441628-65441647 None:intergenic 35.0%
TAAACAGAGGGTCAATACTT+TGG - chr7_2:65441762-65441781 None:intergenic 35.0%
GTTCTAACACTGATAAACAG+AGG - chr7_2:65441775-65441794 None:intergenic 35.0%
CCAAACAAATCTAATCGACT+GGG - chr7_2:65441983-65442002 None:intergenic 35.0%
TCCAAACAAATCTAATCGAC+TGG - chr7_2:65441984-65442003 None:intergenic 35.0%
! AAGACTCGAGAGTAATTTTC+TGG - chr7_2:65442103-65442122 None:intergenic 35.0%
!! AAACACAAAGGTTTCTAGCT+TGG + chr7_2:65442289-65442308 Msa1069670:CDS 35.0%
TCAGTTAAACTTCCATGATC+TGG - chr7_2:65442353-65442372 None:intergenic 35.0%
GTTTAACTGATGAATGTGAG+AGG + chr7_2:65442363-65442382 Msa1069670:CDS 35.0%
ATGTGAGAGGAATGAAAGAA+AGG + chr7_2:65442376-65442395 Msa1069670:CDS 35.0%
GAATGAAAGAAAGGAGTCTT+GGG + chr7_2:65442385-65442404 Msa1069670:CDS 35.0%
GAGAAAACATGTGATGAATC+AGG + chr7_2:65442407-65442426 Msa1069670:CDS 35.0%
ACTGTTAGAACTCTTTGAAC+AGG - chr7_2:65442447-65442466 None:intergenic 35.0%
!!! CTACTGGTCTTTTTAGGAAA+AGG - chr7_2:65442512-65442531 None:intergenic 35.0%
TCCTAAAAAGACCAGTAGAT+CGG + chr7_2:65442514-65442533 Msa1069670:CDS 35.0%
! AGCAAGAACAAAACTTGCTT+TGG - chr7_2:65442908-65442927 None:intergenic 35.0%
ATCACGTGTTTATACTCCTT+GGG - chr7_2:65442985-65443004 None:intergenic 35.0%
TACTCATGAATAAGCAAGAG+TGG - chr7_2:65443097-65443116 None:intergenic 35.0%
TTGCCACAATCCATTATACT+TGG - chr7_2:65443192-65443211 None:intergenic 35.0%
AGATTCTTTCATACCTCAAG+AGG - chr7_2:65443237-65443256 None:intergenic 35.0%
CTTGAGGTATGAAAGAATCT+AGG + chr7_2:65443237-65443256 Msa1069670:intron 35.0%
TAGGAGATAGAGACATTAGT+TGG + chr7_2:65443256-65443275 Msa1069670:intron 35.0%
!! CAGGTTTTAACGAGATTATG+AGG + chr7_2:65443283-65443302 Msa1069670:intron 35.0%
AAAATGTCGAGTGAATAGAG+GGG + chr7_2:65443312-65443331 Msa1069670:intron 35.0%
! GAAGCAATTTACTTGCTACT+CGG + chr7_2:65443516-65443535 Msa1069670:intron 35.0%
! GCACATGTCTTTCATTGATT+TGG + chr7_2:65443552-65443571 Msa1069670:intron 35.0%
!! GTCTTTCATTGATTTGGAGA+AGG + chr7_2:65443558-65443577 Msa1069670:intron 35.0%
AGGATATCCATGATAGTTTG+AGG + chr7_2:65443662-65443681 Msa1069670:intron 35.0%
GGATATCCATGATAGTTTGA+GGG + chr7_2:65443663-65443682 Msa1069670:intron 35.0%
GATATCCATGATAGTTTGAG+GGG + chr7_2:65443664-65443683 Msa1069670:intron 35.0%
ACTGTTCTCACTCTAATCAT+GGG - chr7_2:65443690-65443709 None:intergenic 35.0%
CTGATCTACTCTCTATACTA+TGG - chr7_2:65443733-65443752 None:intergenic 35.0%
!! TAGTTTTGCCTATAGTTCCA+CGG - chr7_2:65443792-65443811 None:intergenic 35.0%
GAAGATGACATGAATATCAC+TGG + chr7_2:65443909-65443928 Msa1069670:intron 35.0%
!! TGTTTCTAGTCCTCAATCTT+CGG - chr7_2:65443943-65443962 None:intergenic 35.0%
AACAGAATGTTGGACATGAT+AGG + chr7_2:65444104-65444123 Msa1069670:intron 35.0%
!!! AGGTTTTGTTGTGGTCTATT+TGG + chr7_2:65444204-65444223 Msa1069670:intron 35.0%
!! AAGCATCATGCTTTTGAAGA+GGG - chr7_2:65444303-65444322 None:intergenic 35.0%
!! AAAGCATCATGCTTTTGAAG+AGG - chr7_2:65444304-65444323 None:intergenic 35.0%
!!! GTGCTATTTTTCAAGGACAA+TGG - chr7_2:65444375-65444394 None:intergenic 35.0%
AAGTATTTACAGGAGGAAGA+GGG - chr7_2:65444401-65444420 None:intergenic 35.0%
AGTGATGTTGAAATGCTTTG+TGG + chr7_2:65444490-65444509 Msa1069670:three_prime_UTR 35.0%
CCGCCTAGAAAATAATTCAA+AGG - chr7_2:65444532-65444551 None:intergenic 35.0%
TAATGCACATCTTACAATGC+TGG - chr7_2:65444557-65444576 None:intergenic 35.0%
TGGGTTGTTGAAATTGCAGA+AGG - chr7_2:65437269-65437288 None:intergenic 40.0%
AGGTGGAAACAGAAGAATCA+GGG - chr7_2:65437410-65437429 None:intergenic 40.0%
AAGGTGGAAACAGAAGAATC+AGG - chr7_2:65437411-65437430 None:intergenic 40.0%
CTTCTGTTTCCACCTTTCAT+CGG + chr7_2:65437415-65437434 Msa1069670:five_prime_UTR 40.0%
! CAAAAAAACGCACCGATGAA+AGG - chr7_2:65437430-65437449 None:intergenic 40.0%
GATGATAGCTACAGTTTGAG+GGG + chr7_2:65437642-65437661 Msa1069670:intron 40.0%
TCCGAGATCACAAATTCAGA+AGG - chr7_2:65438073-65438092 None:intergenic 40.0%
!! CATAGTGGATGATCAGTTCA+TGG - chr7_2:65438135-65438154 None:intergenic 40.0%
CATGAACTGATCATCCACTA+TGG + chr7_2:65438133-65438152 Msa1069670:five_prime_UTR 40.0%
TTTGTTCCAGTTGCAGTTCT+TGG + chr7_2:65438198-65438217 Msa1069670:five_prime_UTR 40.0%
! ACTGACACGCTTACTAGTTT+CGG - chr7_2:65438393-65438412 None:intergenic 40.0%
TTCCTTTCACCAGATGATCA+CGG - chr7_2:65438450-65438469 None:intergenic 40.0%
AACATGTAAGACCTTGCTGA+GGG + chr7_2:65438483-65438502 Msa1069670:five_prime_UTR 40.0%
! GCTTCACTTGATGGTATTTG+TGG - chr7_2:65438617-65438636 None:intergenic 40.0%
!! AAATGTCGAACTTTTGGGTG+TGG + chr7_2:65438643-65438662 Msa1069670:CDS 40.0%
! TCATGCTGCTTATAGAAGAG+GGG - chr7_2:65438703-65438722 None:intergenic 40.0%
! GACATTTTATGGAAGAGCGA+TGG + chr7_2:65438823-65438842 Msa1069670:CDS 40.0%
GATCTTCAAACTGTGGACAT+TGG - chr7_2:65438858-65438877 None:intergenic 40.0%
!! GAAGAATGGAGATTTGCTAC+TGG - chr7_2:65439007-65439026 None:intergenic 40.0%
!! ATCACCTTTGAAATGACTCG+GGG - chr7_2:65439116-65439135 None:intergenic 40.0%
GCAGTTATACAATGCCTTCT+TGG + chr7_2:65439245-65439264 Msa1069670:CDS 40.0%
GGTCCTTTGCTTGAAAATAG+AGG + chr7_2:65439334-65439353 Msa1069670:CDS 40.0%
AAATAGAGGCTTCATATCCC+AGG + chr7_2:65439348-65439367 Msa1069670:CDS 40.0%
AATAGAGGCTTCATATCCCA+GGG + chr7_2:65439349-65439368 Msa1069670:CDS 40.0%
!! AATAGTTGGTGAACTACCCT+GGG - chr7_2:65439368-65439387 None:intergenic 40.0%
!! TAATAGTTGGTGAACTACCC+TGG - chr7_2:65439369-65439388 None:intergenic 40.0%
! CTTAAGGGAATCAAGTGTTG+TGG + chr7_2:65439399-65439418 Msa1069670:CDS 40.0%
! ACAGATATTACGCCACTTTG+AGG - chr7_2:65439430-65439449 None:intergenic 40.0%
!! GTGGCCATTTTCATTCTTTC+AGG - chr7_2:65439502-65439521 None:intergenic 40.0%
GAAAGAATGAAAATGGCCAC+AGG + chr7_2:65439502-65439521 Msa1069670:CDS 40.0%
AGATTTCTGTCCATCTTCTC+TGG + chr7_2:65439684-65439703 Msa1069670:CDS 40.0%
CACCCATTTCTAATTCTGCA+AGG + chr7_2:65439749-65439768 Msa1069670:CDS 40.0%
AGGTTCACTAGAAGTTTGAG+TGG + chr7_2:65439769-65439788 Msa1069670:CDS 40.0%
ACTTTCAGTCAGAAGGTCTT+TGG + chr7_2:65439792-65439811 Msa1069670:CDS 40.0%
! GTCTTTGGTTGGTTCATTTG+AGG + chr7_2:65439807-65439826 Msa1069670:CDS 40.0%
! TTTTGACCGAATCTGACCTA+CGG + chr7_2:65439952-65439971 Msa1069670:intron 40.0%
AAGTATCCGTAGGTCAGATT+CGG - chr7_2:65439961-65439980 None:intergenic 40.0%
CTTGCCGTGTTAAGTATTTC+TGG + chr7_2:65440020-65440039 Msa1069670:CDS 40.0%
! TGCCGTGTTAAGTATTTCTG+GGG + chr7_2:65440022-65440041 Msa1069670:CDS 40.0%
TCCCCCAGAAATACTTAACA+CGG - chr7_2:65440027-65440046 None:intergenic 40.0%
TATGCATCCATAGATCTTGC+GGG + chr7_2:65440119-65440138 Msa1069670:CDS 40.0%
AGAATTTCCCGCAAGATCTA+TGG - chr7_2:65440129-65440148 None:intergenic 40.0%
CGTTTCCGTATACCAATGAA+AGG + chr7_2:65440221-65440240 Msa1069670:CDS 40.0%
! TATAAGACGAAGGCTCTAAC+AGG - chr7_2:65440328-65440347 None:intergenic 40.0%
GCCTTCGTCTTATATCTGTA+TGG + chr7_2:65440334-65440353 Msa1069670:intron 40.0%
GTTTAGTGAGAAAGTTTGGG+AGG + chr7_2:65440550-65440569 Msa1069670:intron 40.0%
AAGTTTGGGAGGAAAGAGAA+AGG + chr7_2:65440561-65440580 Msa1069670:intron 40.0%
CCGTCTTCCAAACATATTAG+TGG + chr7_2:65440660-65440679 Msa1069670:intron 40.0%
TTCCTTTGATTACTCTCTGC+AGG + chr7_2:65440759-65440778 Msa1069670:intron 40.0%
GATTTGAGTGACATGCCAAT+TGG + chr7_2:65440832-65440851 Msa1069670:CDS 40.0%
AGTATTGTTGCACAGCCAAA+TGG + chr7_2:65441015-65441034 Msa1069670:intron 40.0%
!!! CTATTTCTTTTGGTGGTGAG+AGG + chr7_2:65441165-65441184 Msa1069670:intron 40.0%
TAATGAGGGTCTGATAAGAG+TGG + chr7_2:65441380-65441399 Msa1069670:intron 40.0%
GAGGACAACTTGAAAAAGTG+AGG + chr7_2:65441552-65441571 Msa1069670:intron 40.0%
CTTGAAAAAGTGAGGTTCAG+AGG + chr7_2:65441560-65441579 Msa1069670:intron 40.0%
TTCAACGGGGAAAAAAAGTC+TGG - chr7_2:65441866-65441885 None:intergenic 40.0%
! CCCAGTCGATTAGATTTGTT+TGG + chr7_2:65441980-65441999 Msa1069670:intron 40.0%
TTGGACAGTGGAAATGACAA+AGG + chr7_2:65442164-65442183 Msa1069670:CDS 40.0%
TGGACAGTGGAAATGACAAA+GGG + chr7_2:65442165-65442184 Msa1069670:CDS 40.0%
GGAATGAAAGAAAGGAGTCT+TGG + chr7_2:65442384-65442403 Msa1069670:CDS 40.0%
! TCAAAGAGTTCTAACAGTGC+TGG + chr7_2:65442449-65442468 Msa1069670:CDS 40.0%
!! CTGTTTGTTTTCGATTCCAG+TGG + chr7_2:65442844-65442863 Msa1069670:intron 40.0%
GATCACGTGTTTATACTCCT+TGG - chr7_2:65442986-65443005 None:intergenic 40.0%
AATGATCACGCGTTAAGGAT+AGG - chr7_2:65443012-65443031 None:intergenic 40.0%
!! ATAATGGATTGTGGCAAGAC+AGG + chr7_2:65443195-65443214 Msa1069670:intron 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG + chr7_2:65443485-65443504 Msa1069670:intron 40.0%
! ATTTGGAGAAGGCATACGAT+AGG + chr7_2:65443569-65443588 Msa1069670:intron 40.0%
! TTTGGAGAAGGCATACGATA+GGG + chr7_2:65443570-65443589 Msa1069670:intron 40.0%
CACTGTTCTCACTCTAATCA+TGG - chr7_2:65443691-65443710 None:intergenic 40.0%
CATGATTAGAGTGAGAACAG+TGG + chr7_2:65443689-65443708 Msa1069670:intron 40.0%
GAAGACTGAGGTCAATGATT+TGG + chr7_2:65443817-65443836 Msa1069670:intron 40.0%
CAATGTTGGCCGAAATTATC+AGG + chr7_2:65444026-65444045 Msa1069670:intron 40.0%
AAAACCTTGTGAGACACTAC+AGG - chr7_2:65444191-65444210 None:intergenic 40.0%
!!! TGTCTCACAAGGTTTTGTTG+TGG + chr7_2:65444195-65444214 Msa1069670:intron 40.0%
GTCTATTTGGCAGATGAATG+TGG + chr7_2:65444217-65444236 Msa1069670:intron 40.0%
ATCTTGGATCTTCAGGGAAA+TGG - chr7_2:65444247-65444266 None:intergenic 40.0%
! CGAAGTATCTTGGATCTTCA+GGG - chr7_2:65444253-65444272 None:intergenic 40.0%
! TCGAAGTATCTTGGATCTTC+AGG - chr7_2:65444254-65444273 None:intergenic 40.0%
! CAGTTGATGTCGAAGTATCT+TGG - chr7_2:65444263-65444282 None:intergenic 40.0%
!! AGCATCATGCTTTTGAAGAG+GGG - chr7_2:65444302-65444321 None:intergenic 40.0%
!! ATGCTATTGGCCTTTACTTG+AGG + chr7_2:65444349-65444368 Msa1069670:three_prime_UTR 40.0%
!!! AGGGTCAGTGCTATTTTTCA+AGG - chr7_2:65444382-65444401 None:intergenic 40.0%
! GAAGTATTTACAGGAGGAAG+AGG - chr7_2:65444402-65444421 None:intergenic 40.0%
TCCCAAGGTTGAATTGCAGA+AGG + chr7_2:65437364-65437383 Msa1069670:five_prime_UTR 45.0%
CCCTTCTGCAATTCAACCTT+GGG - chr7_2:65437368-65437387 None:intergenic 45.0%
CCCAAGGTTGAATTGCAGAA+GGG + chr7_2:65437365-65437384 Msa1069670:five_prime_UTR 45.0%
ACCCTTCTGCAATTCAACCT+TGG - chr7_2:65437369-65437388 None:intergenic 45.0%
! AAAAACGCACCGATGAAAGG+TGG - chr7_2:65437427-65437446 None:intergenic 45.0%
GAAGCCCAAACAATCCATAG+TGG - chr7_2:65438150-65438169 None:intergenic 45.0%
TAGGTCTTACCGTGATCATC+TGG + chr7_2:65438438-65438457 Msa1069670:five_prime_UTR 45.0%
TACCGTGATCATCTGGTGAA+AGG + chr7_2:65438445-65438464 Msa1069670:five_prime_UTR 45.0%
GAACATGTAAGACCTTGCTG+AGG + chr7_2:65438482-65438501 Msa1069670:five_prime_UTR 45.0%
ATCAATGTGATCCCTCAGCA+AGG - chr7_2:65438497-65438516 None:intergenic 45.0%
!! CTTTTGGGTGTGGTTTCAAG+CGG + chr7_2:65438653-65438672 Msa1069670:CDS 45.0%
TGCTTCCAAAACTGAACGGA+GGG + chr7_2:65438904-65438923 Msa1069670:CDS 45.0%
! AAGAACCCTCCGTTCAGTTT+TGG - chr7_2:65438912-65438931 None:intergenic 45.0%
TGATTCAAAACCGACAACCC+TGG - chr7_2:65438945-65438964 None:intergenic 45.0%
!!! AGGGTTGTCGGTTTTGAATC+AGG + chr7_2:65438944-65438963 Msa1069670:CDS 45.0%
GACCAATGAAGTGGCAGATT+CGG - chr7_2:65439056-65439075 None:intergenic 45.0%
! AATCTGCCACTTCATTGGTC+AGG + chr7_2:65439056-65439075 Msa1069670:CDS 45.0%
! TTCAGGAAATCTAGGACCGA+GGG - chr7_2:65439485-65439504 None:intergenic 45.0%
! TTTCAGGAAATCTAGGACCG+AGG - chr7_2:65439486-65439505 None:intergenic 45.0%
GAAATGTCGTCCAGAGAAGA+TGG - chr7_2:65439697-65439716 None:intergenic 45.0%
!! GGTGTTGATTCTAGAGAACG+TGG - chr7_2:65439733-65439752 None:intergenic 45.0%
! TGAGTGGACTTTCAGTCAGA+AGG + chr7_2:65439785-65439804 Msa1069670:CDS 45.0%
TCAGTCAGAAGGTCTTTGGT+TGG + chr7_2:65439796-65439815 Msa1069670:CDS 45.0%
! AGGAGTCTCTTTTATCTGGC+CGG + chr7_2:65439827-65439846 Msa1069670:CDS 45.0%
!! TTATCTGGCCGGTTTGTTTC+TGG + chr7_2:65439838-65439857 Msa1069670:CDS 45.0%
!! GCCGTGTTAAGTATTTCTGG+GGG + chr7_2:65440023-65440042 Msa1069670:CDS 45.0%
TAAGCCCTCGTTTCAGAAGT+TGG - chr7_2:65440172-65440191 None:intergenic 45.0%
TGGGAGGAAAGAGAAAGGAA+AGG + chr7_2:65440566-65440585 Msa1069670:intron 45.0%
CACCTGCAGAGAGTAATCAA+AGG - chr7_2:65440764-65440783 None:intergenic 45.0%
! GTGTGAAGAGGAGTCTTTTC+TGG - chr7_2:65440796-65440815 None:intergenic 45.0%
CAAGTACGTCAATGACGCTA+AGG - chr7_2:65440990-65441009 None:intergenic 45.0%
TGAGAGGGTGGATGAAACTA+AGG + chr7_2:65441181-65441200 Msa1069670:intron 45.0%
GTCATTTCCACTGTCCAAAC+CGG - chr7_2:65442162-65442181 None:intergenic 45.0%
AATCATGACAACCCGTGTAG+TGG + chr7_2:65442206-65442225 Msa1069670:CDS 45.0%
ATCATGACAACCCGTGTAGT+GGG + chr7_2:65442207-65442226 Msa1069670:CDS 45.0%
TGCATTACTTCCCCACTACA+CGG - chr7_2:65442221-65442240 None:intergenic 45.0%
GAAAAGGGCAGATAAAGCGA+AGG - chr7_2:65442496-65442515 None:intergenic 45.0%
!!! GCCGATCTACTGGTCTTTTT+AGG - chr7_2:65442518-65442537 None:intergenic 45.0%
!! GCATTTTTGAGCCGATCTAC+TGG - chr7_2:65442528-65442547 None:intergenic 45.0%
AGTTCTCTTCCAGAAAAGGC+TGG + chr7_2:65442554-65442573 Msa1069670:CDS 45.0%
TCTTCCAGAAAAGGCTGGAT+TGG + chr7_2:65442559-65442578 Msa1069670:CDS 45.0%
! ATGTCCAATCCAGCCTTTTC+TGG - chr7_2:65442566-65442585 None:intergenic 45.0%
! AGAAAAGGCTGGATTGGACA+TGG + chr7_2:65442565-65442584 Msa1069670:CDS 45.0%
TATGCATACCTTTCCCTCGT+CGG - chr7_2:65442657-65442676 None:intergenic 45.0%
AACAAACCTTCTGCTACCCA+AGG + chr7_2:65442966-65442985 Msa1069670:intron 45.0%
TATACTCCTTGGGTAGCAGA+AGG - chr7_2:65442975-65442994 None:intergenic 45.0%
ACAGGAATGATCACGCGTTA+AGG - chr7_2:65443017-65443036 None:intergenic 45.0%
AACTTATTGCTCCTTGGGAC+AGG - chr7_2:65443035-65443054 None:intergenic 45.0%
ACCAGACAATGTACCTCTTG+AGG + chr7_2:65443221-65443240 Msa1069670:intron 45.0%
! ACCTCAAGAGGTACATTGTC+TGG - chr7_2:65443225-65443244 None:intergenic 45.0%
! AGAGACATTAGTTGGCTCAC+AGG + chr7_2:65443264-65443283 Msa1069670:intron 45.0%
GGTAGTTGAACCGAAGATTG+AGG + chr7_2:65443930-65443949 Msa1069670:intron 45.0%
!! CATCATGCTTTTGAAGAGGG+GGG - chr7_2:65444300-65444319 None:intergenic 45.0%
!! GCATCATGCTTTTGAAGAGG+GGG - chr7_2:65444301-65444320 None:intergenic 45.0%
AGGACAATGGCCTCAAGTAA+AGG - chr7_2:65444362-65444381 None:intergenic 45.0%
!! TAAATATTAAATCTTATTAT+GGG - chr7_2:65440961-65440980 None:intergenic 5.0%
!! TTAAATATTAAATCTTATTA+TGG - chr7_2:65440962-65440981 None:intergenic 5.0%
!!! ATAATTTTAAAAGATTATAT+TGG + chr7_2:65444576-65444595 Msa1069670:three_prime_UTR 5.0%
GGGTTTGCATCCGAAAACTG+AGG - chr7_2:65438683-65438702 None:intergenic 50.0%
CTGCTTCCAAAACTGAACGG+AGG + chr7_2:65438903-65438922 Msa1069670:CDS 50.0%
GGTTCTTACTCCTGCTTCCA+GGG + chr7_2:65438925-65438944 Msa1069670:CDS 50.0%
!! AGTGGCAGATTCGGTGTCAT+TGG - chr7_2:65439047-65439066 None:intergenic 50.0%
! CACCGAATCTGCCACTTCAT+TGG + chr7_2:65439051-65439070 Msa1069670:CDS 50.0%
TCGCTTCCTGACCAATGAAG+TGG - chr7_2:65439065-65439084 None:intergenic 50.0%
CTCTCCCCGAGTCATTTCAA+AGG + chr7_2:65439109-65439128 Msa1069670:CDS 50.0%
GTTGTGGTCAGACCTCAAAG+TGG + chr7_2:65439415-65439434 Msa1069670:CDS 50.0%
AACGAAAGAGGAGAGCTCAC+AGG - chr7_2:65439457-65439476 None:intergenic 50.0%
! TCAGGAAATCTAGGACCGAG+GGG - chr7_2:65439484-65439503 None:intergenic 50.0%
TGAAAATGGCCACAGGATGC+AGG + chr7_2:65439509-65439528 Msa1069670:CDS 50.0%
!! GAGGCCAACTTCTGAAACGA+GGG + chr7_2:65440165-65440184 Msa1069670:CDS 50.0%
!! GAGAGCATTGAGAGTGTGCA+TGG - chr7_2:65440616-65440635 None:intergenic 50.0%
!!! TTCTTTTGGTGGTGAGAGGG+TGG + chr7_2:65441169-65441188 Msa1069670:intron 50.0%
TAGCATGTACTGCCACATCC+AGG + chr7_2:65441435-65441454 Msa1069670:intron 50.0%
AGCATGTACTGCCACATCCA+GGG + chr7_2:65441436-65441455 Msa1069670:intron 50.0%
TTCAGAAATCTCTCAGCCCC+TGG - chr7_2:65441456-65441475 None:intergenic 50.0%
TGGGGATTGATACCTGTCTG+TGG + chr7_2:65441613-65441632 Msa1069670:intron 50.0%
!! AGTTCAACCGGTTTGGACAG+TGG + chr7_2:65442152-65442171 Msa1069670:CDS 50.0%
TCATGACAACCCGTGTAGTG+GGG + chr7_2:65442208-65442227 Msa1069670:CDS 50.0%
GCATTACTTCCCCACTACAC+GGG - chr7_2:65442220-65442239 None:intergenic 50.0%
TCCAAGCACTCACCAGATCA+TGG + chr7_2:65442338-65442357 Msa1069670:CDS 50.0%
TCCATGATCTGGTGAGTGCT+TGG - chr7_2:65442342-65442361 None:intergenic 50.0%
! GGTGGAGAGCATAACGAAGT+GGG - chr7_2:65442475-65442494 None:intergenic 50.0%
! AGGTGGAGAGCATAACGAAG+TGG - chr7_2:65442476-65442495 None:intergenic 50.0%
AAGGGCAGATAAAGCGAAGG+TGG - chr7_2:65442493-65442512 None:intergenic 50.0%
! AAGGCTGGATTGGACATGGA+AGG + chr7_2:65442569-65442588 Msa1069670:CDS 50.0%
! AGGCTGGATTGGACATGGAA+GGG + chr7_2:65442570-65442589 Msa1069670:CDS 50.0%
GATTGGACATGGAAGGGGAA+CGG + chr7_2:65442576-65442595 Msa1069670:CDS 50.0%
TGCTTCATGATCAACCTCCC+AGG - chr7_2:65443502-65443521 None:intergenic 50.0%
ATACGATAGGGCCCCAACAT+AGG + chr7_2:65443582-65443601 Msa1069670:intron 50.0%
ATGGGCCCCTCAAACTATCA+TGG - chr7_2:65443672-65443691 None:intergenic 50.0%
GTGGAAAGCCGTGGAACTAT+AGG + chr7_2:65443781-65443800 Msa1069670:intron 50.0%
TCTGCCTGTAGTGTCTCACA+AGG + chr7_2:65444184-65444203 Msa1069670:intron 50.0%
TGTGTGCGGTGGGAATGATG+AGG + chr7_2:65437088-65437107 Msa1069670:five_prime_UTR 55.0%
GGCTTCATCTGCTGCGAGTA+TGG + chr7_2:65438164-65438183 Msa1069670:five_prime_UTR 55.0%
! AAGCGGCTCGCCTCAGTTTT+CGG + chr7_2:65438670-65438689 Msa1069670:CDS 55.0%
GGGTTCTTACTCCTGCTTCC+AGG + chr7_2:65438924-65438943 Msa1069670:CDS 55.0%
ACTCCTGCTTCCAGGGTTGT+CGG + chr7_2:65438932-65438951 Msa1069670:CDS 55.0%
AAACCGACAACCCTGGAAGC+AGG - chr7_2:65438938-65438957 None:intergenic 55.0%
CCTCTTTCGTTGTCACCCCT+CGG + chr7_2:65439466-65439485 Msa1069670:CDS 55.0%
!! GGAGGCCAACTTCTGAAACG+AGG + chr7_2:65440164-65440183 Msa1069670:CDS 55.0%
GCATGTACTGCCACATCCAG+GGG + chr7_2:65441437-65441456 Msa1069670:intron 55.0%
AATCTCTCAGCCCCTGGATG+TGG - chr7_2:65441450-65441469 None:intergenic 55.0%
TGACTGAGGGGAAGTTGAGC+TGG - chr7_2:65442126-65442145 None:intergenic 55.0%
! GGCTGGATTGGACATGGAAG+GGG + chr7_2:65442571-65442590 Msa1069670:CDS 55.0%
TCGGCATCTGAATGACGCTG+AGG - chr7_2:65442638-65442657 None:intergenic 55.0%
CGTCATTCAGATGCCGACGA+GGG + chr7_2:65442641-65442660 Msa1069670:CDS 55.0%
TTCAGATGCCGACGAGGGAA+AGG + chr7_2:65442646-65442665 Msa1069670:CDS 55.0%
GCGTGATCATTCCTGTCCCA+AGG + chr7_2:65443021-65443040 Msa1069670:intron 55.0%
TCGAGCAGCTCTATTGCTCG+AGG + chr7_2:65443756-65443775 Msa1069670:intron 55.0%
AGCTCTATTGCTCGAGGCAG+TGG + chr7_2:65443762-65443781 Msa1069670:intron 55.0%
GGGTGTGCTGCATGTACCCT+TGG + chr7_2:65438740-65438759 Msa1069670:CDS 60.0%
! GGGGAGAGCATACTGCTCAG+TGG - chr7_2:65439097-65439116 None:intergenic 60.0%
CCGAGGGGTGACAACGAAAG+AGG - chr7_2:65439469-65439488 None:intergenic 60.0%
GGTGACACTCCTGCATCCTG+TGG - chr7_2:65439521-65439540 None:intergenic 60.0%
GCGTCATTCAGATGCCGACG+AGG + chr7_2:65442640-65442659 Msa1069670:CDS 60.0%
CTCGAGGCAGTGGAAAGCCG+TGG + chr7_2:65443772-65443791 Msa1069670:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 65437082 65444666 65437082 ID=Msa1069670;Name=Msa1069670
chr7_2 mRNA 65437082 65444666 65437082 ID=Msa1069670-mRNA-1;Parent=Msa1069670;Name=Msa1069670-mRNA-1;_AED=0.08;_eAED=0.08;_QI=829|1|1|1|0.8|0.66|6|383|744
chr7_2 exon 65437082 65437436 65437082 ID=Msa1069670-mRNA-1:exon:13772;Parent=Msa1069670-mRNA-1
chr7_2 exon 65438131 65439873 65438131 ID=Msa1069670-mRNA-1:exon:13773;Parent=Msa1069670-mRNA-1
chr7_2 exon 65440005 65440256 65440005 ID=Msa1069670-mRNA-1:exon:13774;Parent=Msa1069670-mRNA-1
chr7_2 exon 65440781 65440861 65440781 ID=Msa1069670-mRNA-1:exon:13775;Parent=Msa1069670-mRNA-1
chr7_2 exon 65442089 65442667 65442089 ID=Msa1069670-mRNA-1:exon:13776;Parent=Msa1069670-mRNA-1
chr7_2 exon 65444230 65444666 65444230 ID=Msa1069670-mRNA-1:exon:13777;Parent=Msa1069670-mRNA-1
chr7_2 five_prime_UTR 65437082 65437436 65437082 ID=Msa1069670-mRNA-1:five_prime_utr;Parent=Msa1069670-mRNA-1
chr7_2 five_prime_UTR 65438131 65438604 65438131 ID=Msa1069670-mRNA-1:five_prime_utr;Parent=Msa1069670-mRNA-1
chr7_2 CDS 65438605 65439873 65438605 ID=Msa1069670-mRNA-1:cds;Parent=Msa1069670-mRNA-1
chr7_2 CDS 65440005 65440256 65440005 ID=Msa1069670-mRNA-1:cds;Parent=Msa1069670-mRNA-1
chr7_2 CDS 65440781 65440861 65440781 ID=Msa1069670-mRNA-1:cds;Parent=Msa1069670-mRNA-1
chr7_2 CDS 65442089 65442667 65442089 ID=Msa1069670-mRNA-1:cds;Parent=Msa1069670-mRNA-1
chr7_2 CDS 65444230 65444283 65444230 ID=Msa1069670-mRNA-1:cds;Parent=Msa1069670-mRNA-1
chr7_2 three_prime_UTR 65444284 65444666 65444284 ID=Msa1069670-mRNA-1:three_prime_utr;Parent=Msa1069670-mRNA-1
Gene Sequence

>Msa1069670

ATGGGTTTGCCACAAATACCATCAAGTGAAGCTGATGAAAATGTCGAACTTTTGGGTGTGGTTTCAAGCGGCTCGCCTCAGTTTTCGGATGCAAACCCCTCTTCTATAAGCAGCATGAATAGTGTAAACACTCATGGGTGTGCTGCATGTACCCTTGGATCCTCATTTGAAAATTTCCCCAAGAATGCCTCATTAGAAATGCCAAATGTTTCTGATAAGACATTTTATGGAAGAGCGATGGAAGTCACTTCCAATGTCCACAGTTTGAAGATCAATTCAACAGATAGAAGTAATCTTTCTGCTTCCAAAACTGAACGGAGGGTTCTTACTCCTGCTTCCAGGGTTGTCGGTTTTGAATCAGGCAGAACAAGTTCTTTAACTGATGGAATCGCTGAAGTTCCAGTAGCAAATCTCCATTCTTCTTTTGGTAGTATCTCAGCCAATGACACCGAATCTGCCACTTCATTGGTCAGGAAGCGACTTTTATCTCCACTGAGCAGTATGCTCTCCCCGAGTCATTTCAAAGGTGATTCTCTTGACATAGGATGCAGAAATAATGAGGCTTTCTCCCTTGTTAAGAATGATAATGTTAGAAAGTCCACTGCACAAGATAATAAGAAGGCAAATATTGGATGTAAAAGCAGTTATACAATGCCTTCTTGGTCCTTATCAAATTGCTTTGAGCAGAAAAACATGGCACAGAGTAGAGAATCCATTTTTCAAACTGATGGTCCTTTGCTTGAAAATAGAGGCTTCATATCCCAGGGTAGTTCACCAACTATTAAAATTGAACACTTAAGGGAATCAAGTGTTGTGGTCAGACCTCAAAGTGGCGTAATATCTGTATCACCTGTGAGCTCTCCTCTTTCGTTGTCACCCCTCGGTCCTAGATTTCCTGAAAGAATGAAAATGGCCACAGGATGCAGGAGTGTCACCGAAGAGATAAAGAATTGCAATATAACTTTAAGCAGTATAGAAGAATCACTAGAGAATTCTAATTCATGTGATATTTTAGGTCATAAAGATGATGATTTAAAATTTTCACGTAAATCTTTTGAAGATGTTGAATTCTCCTTCAAAGATTTCTGTCCATCTTCTCTGGACGACATTTCTTACATGAATTGTCCACGTTCTCTAGAATCAACACCCATTTCTAATTCTGCAAGGTTCACTAGAAGTTTGAGTGGACTTTCAGTCAGAAGGTCTTTGGTTGGTTCATTTGAGGAGTCTCTTTTATCTGGCCGGTTTGTTTCTGGAAACCATACTAAGAAAATCGATGGTTTTCTTGCCGTGTTAAGTATTTCTGGGGGAAACTTCTCTCCTAAATCACAGAAGCTTCCATTTTCTGTTACTAGTGTCGATGGAGATTGCTATCTATTGTATTATGCATCCATAGATCTTGCGGGAAATTCTTTATCAAACAGGTTTGGAGGCCAACTTCTGAAACGAGGGCTTAGAAAAGATGATTCACAAATGGTCAAAAGCCGTTTCCGTATACCAATGAAAGGAAGAATTCAGCTGGTGCTAAGCAATCCAGAAAAGACTCCTCTTCACACATTCTTTTGCAACTATGATTTGAGTGACATGCCAATTGGTACCAAAACATTCTTGCGCCAGAAAATTACTCTCGAGTCTTCCAGCTCAACTTCCCCTCAGTCAAAAAATAGTTCAACCGGTTTGGACAGTGGAAATGACAAAGGGATTCCAACAGTACAAAAGAATCATGACAACCCGTGTAGTGGGGAAGTAATGCACACCGATGCAGTTGATGTTGTAATTAAAACAAAATCTACAAATCAGAGAAACACAAAGGTTTCTAGCTTGGAGAATTTTCTAAACAAAGAGGATTCTTCCAAGCACTCACCAGATCATGGAAGTTTAACTGATGAATGTGAGAGGAATGAAAGAAAGGAGTCTTGGGAGAAAACATGTGATGAATCAGGGAAATCATTAAATTCCTGTTCAAAGAGTTCTAACAGTGCTGGCCCACTTCGTTATGCTCTCCACCTTCGCTTTATCTGCCCTTTTCCTAAAAAGACCAGTAGATCGGCTCAAAAATGCAAATTAAGTTCTCTTCCAGAAAAGGCTGGATTGGACATGGAAGGGGAACGGAGATTCTACTTGTGTAATGATTTAAAGGTTGTGTTTCCTCAGCGTCATTCAGATGCCGACGAGGGAAAGATGAATGTGGAATACCATTTCCCTGAAGATCCAAGATACTTCGACATCAACTGA
Protein sequence

>Msa1069670

MGLPQIPSSEADENVELLGVVSSGSPQFSDANPSSISSMNSVNTHGCAACTLGSSFENFPKNASLEMPNVSDKTFYGRAMEVTSNVHSLKINSTDRSNLSASKTERRVLTPASRVVGFESGRTSSLTDGIAEVPVANLHSSFGSISANDTESATSLVRKRLLSPLSSMLSPSHFKGDSLDIGCRNNEAFSLVKNDNVRKSTAQDNKKANIGCKSSYTMPSWSLSNCFEQKNMAQSRESIFQTDGPLLENRGFISQGSSPTIKIEHLRESSVVVRPQSGVISVSPVSSPLSLSPLGPRFPERMKMATGCRSVTEEIKNCNITLSSIEESLENSNSCDILGHKDDDLKFSRKSFEDVEFSFKDFCPSSLDDISYMNCPRSLESTPISNSARFTRSLSGLSVRRSLVGSFEESLLSGRFVSGNHTKKIDGFLAVLSISGGNFSPKSQKLPFSVTSVDGDCYLLYYASIDLAGNSLSNRFGGQLLKRGLRKDDSQMVKSRFRIPMKGRIQLVLSNPEKTPLHTFFCNYDLSDMPIGTKTFLRQKITLESSSSTSPQSKNSSTGLDSGNDKGIPTVQKNHDNPCSGEVMHTDAVDVVIKTKSTNQRNTKVSSLENFLNKEDSSKHSPDHGSLTDECERNERKESWEKTCDESGKSLNSCSKSSNSAGPLRYALHLRFICPFPKKTSRSAQKCKLSSLPEKAGLDMEGERRFYLCNDLKVVFPQRHSDADEGKMNVEYHFPEDPRYFDIN*