AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1071360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071360 MtrunA17_Chr5g0395341 96.186 236 6 1 17 252 167 399 3.87e-165 462
Msa1071360 MtrunA17_Chr4g0039841 57.085 247 85 5 17 249 195 434 1.42e-66 213
Msa1071360 MtrunA17_Chr7g0261361 39.496 119 65 2 49 163 196 311 2.21e-17 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1071360 AT5G16880.4 61.694 248 76 7 17 252 167 407 1.89e-81 250
Msa1071360 AT5G16880.1 61.694 248 76 7 17 252 167 407 1.89e-81 250
Msa1071360 AT5G16880.2 61.694 248 76 7 17 252 167 407 1.89e-81 250
Msa1071360 AT5G16880.3 69.355 124 29 3 17 135 167 286 1.48e-50 167
Msa1071360 AT1G06210.1 43.038 79 45 0 83 161 229 307 7.37e-17 79.3

Find 67 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAATTTATGTTTGAAATA+TGG 0.212757 7_2:-67875698 Msa1071360:three_prime_UTR
GAATTTCATCATTAACATTC+AGG 0.240701 7_2:+67876158 None:intergenic
GTTTGAGATCAAGGGGTATT+AGG 0.265335 7_2:-67877729 Msa1071360:CDS
TCTTCATGATTTCAGATTGC+TGG 0.295914 7_2:-67875756 Msa1071360:three_prime_UTR
TATTAGTAGTGCAGCTTAGA+AGG 0.297112 7_2:+67875841 None:intergenic
GATCGAGGAGGAGTGAAAAT+TGG 0.348941 7_2:+67877676 None:intergenic
TCAAGGGGTATTAGGTTTCC+TGG 0.364649 7_2:-67877721 Msa1071360:CDS
TCAGCAGGATGTTCCTGTGC+AGG 0.429125 7_2:-67877605 Msa1071360:CDS
GTTTGCAGAGTTTGAGATCA+AGG 0.430814 7_2:-67877738 Msa1071360:CDS
TGGATCAAGACCTGGTGTCC+AGG 0.433352 7_2:-67875984 Msa1071360:CDS
ACAGGTATCATAGCTGGTTC+AGG 0.438254 7_2:+67876079 None:intergenic
TCAGGTTGAAGTGGAGCAAC+TGG 0.438563 7_2:+67876097 None:intergenic
AGATGCCGAGGTGACTCATC+TGG 0.439471 7_2:+67876046 None:intergenic
TCATCTGGCTCGACAGCAAC+AGG 0.445296 7_2:+67876061 None:intergenic
GTTATCATCTTCACCGCAAC+AGG 0.446688 7_2:-67877512 Msa1071360:CDS
CAGCGTATTGTTGAAACTGC+TGG 0.453044 7_2:-67876208 Msa1071360:CDS
AAAGGTTCTTACCAAGTATG+AGG 0.458529 7_2:-67876134 Msa1071360:CDS
TCCAGCTGGCTTTCTAATCA+AGG 0.459682 7_2:+67876003 None:intergenic
AATTTCATCATTAACATTCA+GGG 0.462722 7_2:+67876159 None:intergenic
CTTGTTAGCAGTTGTTTATG+AGG 0.468072 7_2:-67877773 Msa1071360:CDS
TGTCATCATTGTTCCCTCCC+TGG 0.472644 7_2:+67875966 None:intergenic
TGTTAATGATGAAATTCTAA+AGG 0.474583 7_2:-67876152 Msa1071360:CDS
TGGTTTCAACTCCTCATACT+TGG 0.475462 7_2:+67876123 None:intergenic
ATAATTAATAATAACAATCA+TGG 0.478181 7_2:+67875731 None:intergenic
TTGTTCCCTCCCTGGACACC+AGG 0.478367 7_2:+67875974 None:intergenic
AGCGTATTGTTGAAACTGCT+GGG 0.485271 7_2:-67876207 Msa1071360:CDS
TCATCCACATGAGGTGGCTC+TGG 0.486821 7_2:+67877643 None:intergenic
ATAAGTTCTTGACAAGGTAT+AGG 0.493125 7_2:-67875672 Msa1071360:three_prime_UTR
TGAAGTGGAGCAACTGGAGG+TGG 0.494688 7_2:+67876103 None:intergenic
GAGATATCTGAAGAAACAAT+GGG 0.523525 7_2:-67875645 Msa1071360:three_prime_UTR
CAGCAGGATGTTCCTGTGCA+GGG 0.534177 7_2:-67877604 Msa1071360:CDS
GCATCTTGATGATGCTAAAG+AGG 0.537875 7_2:-67876029 Msa1071360:CDS
ACTATTTCTCGCAACATCAA+AGG 0.544546 7_2:+67877555 None:intergenic
ACACCAGGTCTTGATCCAGC+TGG 0.545281 7_2:+67875989 None:intergenic
TTTGCAGAGTTTGAGATCAA+GGG 0.548552 7_2:-67877737 Msa1071360:CDS
TGAGATATCTGAAGAAACAA+TGG 0.555134 7_2:-67875646 Msa1071360:three_prime_UTR
ACAGCAACAGGTATCATAGC+TGG 0.557428 7_2:+67876073 None:intergenic
GGATCAAGACCTGGTGTCCA+GGG 0.564963 7_2:-67875983 Msa1071360:CDS
TGGTCGTGATAATGAAAGCT+TGG 0.574597 7_2:-67877701 Msa1071360:CDS
TCCTTGATTAGAAAGCCAGC+TGG 0.580335 7_2:-67876004 Msa1071360:CDS
TATTCCGCGTCAATTTCAGC+AGG 0.583193 7_2:-67877620 Msa1071360:CDS
GCACTACTAATAATCGACCT+TGG 0.587122 7_2:-67875830 Msa1071360:three_prime_UTR
ATAGCTGGTTCAGGTTGAAG+TGG 0.593332 7_2:+67876088 None:intergenic
AAGCTTTCATTATCACGACC+AGG 0.599613 7_2:+67877703 None:intergenic
CAAGACCTGGTGTCCAGGGA+GGG 0.606209 7_2:-67875979 Msa1071360:CDS
TTGCAGAGTTTGAGATCAAG+GGG 0.612482 7_2:-67877736 Msa1071360:CDS
TGTGCCAGAGCCACCTCATG+TGG 0.617389 7_2:-67877647 Msa1071360:CDS
AGGGAACAATGATGACATGA+TGG 0.620276 7_2:-67875960 Msa1071360:CDS
AGTACGTTAAAGATAGTCCA+AGG 0.629686 7_2:+67875813 None:intergenic
TCTTCTGTATAACCCTGCAC+AGG 0.636308 7_2:+67877592 None:intergenic
AAGCCAGCTGGATCAAGACC+TGG 0.644482 7_2:-67875992 Msa1071360:CDS
TCAAGACCTGGTGTCCAGGG+AGG 0.644753 7_2:-67875980 Msa1071360:CDS
ACGACACTGCTGTACAAGTG+TGG 0.646490 7_2:+67876249 None:intergenic
GGAATATCATCCACATGAGG+TGG 0.649969 7_2:+67877637 None:intergenic
CAGCAGTTTCAACAATACGC+TGG 0.650943 7_2:+67876209 None:intergenic
GGTTGAAGTGGAGCAACTGG+AGG 0.659537 7_2:+67876100 None:intergenic
ACCTGCAAAACATCCTGTTG+CGG 0.661120 7_2:+67877499 None:intergenic
CGCGGAATATCATCCACATG+AGG 0.664035 7_2:+67877634 None:intergenic
TTAGCATCATCAAGATGCCG+AGG 0.665571 7_2:+67876034 None:intergenic
GCGTATTGTTGAAACTGCTG+GGG 0.671775 7_2:-67876206 Msa1071360:CDS
TCTGGCACAGTAGCTGATCG+AGG 0.677519 7_2:+67877661 None:intergenic
GGCACAGTAGCTGATCGAGG+AGG 0.687542 7_2:+67877664 None:intergenic
TCGAGCCAGATGAGTCACCT+CGG 0.688154 7_2:-67876051 Msa1071360:CDS
TTATACAGAAGAACAGACGA+AGG 0.689917 7_2:-67877581 Msa1071360:CDS
TGGTATATAAGTTCTTGACA+AGG 0.698923 7_2:-67875678 Msa1071360:three_prime_UTR
ACACTGCTGTACAAGTGTGG+CGG 0.710445 7_2:+67876252 None:intergenic
ACATCCTGCTGAAATTGACG+CGG 0.718477 7_2:+67877616 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATATAGTTTTGAAAAT+TGG - chr7_2:67876569-67876588 Msa1071360:intron 10.0%
!! ATAATTAATAATAACAATCA+TGG + chr7_2:67877688-67877707 None:intergenic 10.0%
!!! TAAAATATAGTTTTGAAAAT+TGG - chr7_2:67876569-67876588 Msa1071360:intron 10.0%
!! ATAATTAATAATAACAATCA+TGG + chr7_2:67877688-67877707 None:intergenic 10.0%
!! TTATACATATTCTAATGTTT+GGG - chr7_2:67876484-67876503 Msa1071360:intron 15.0%
!! ATTATATGGGATATAATAAT+GGG - chr7_2:67876776-67876795 Msa1071360:intron 15.0%
!! TTATACATATTCTAATGTTT+GGG - chr7_2:67876484-67876503 Msa1071360:intron 15.0%
!! ATTATATGGGATATAATAAT+GGG - chr7_2:67876776-67876795 Msa1071360:intron 15.0%
!! GTTATACATATTCTAATGTT+TGG - chr7_2:67876483-67876502 Msa1071360:intron 20.0%
!!! AGTGAAATTGATATTTTCTA+TGG - chr7_2:67876615-67876634 Msa1071360:intron 20.0%
!!! GTGAAATTGATATTTTCTAT+GGG - chr7_2:67876616-67876635 Msa1071360:intron 20.0%
!!! AGCTAATGTAGATTTTTTTT+TGG - chr7_2:67876668-67876687 Msa1071360:intron 20.0%
!!! TTTATATGGGTTGATTATAT+GGG - chr7_2:67876763-67876782 Msa1071360:intron 20.0%
!! GATTATATGGGATATAATAA+TGG - chr7_2:67876775-67876794 Msa1071360:intron 20.0%
!!! ATGTGCTATTTATACTTAAT+TGG - chr7_2:67876819-67876838 Msa1071360:intron 20.0%
!! ATTATCAGTCAATTTCAAAT+CGG - chr7_2:67876893-67876912 Msa1071360:intron 20.0%
!! AATTTATGTATTCCTCATTT+GGG + chr7_2:67877044-67877063 None:intergenic 20.0%
!! AAATTTATGTATTCCTCATT+TGG + chr7_2:67877045-67877064 None:intergenic 20.0%
!!! AATGAGGAATACATAAATTT+TGG - chr7_2:67877045-67877064 Msa1071360:intron 20.0%
!! AATTTCATCATTAACATTCA+GGG + chr7_2:67877260-67877279 None:intergenic 20.0%
!! TGTTAATGATGAAATTCTAA+AGG - chr7_2:67877264-67877283 Msa1071360:intron 20.0%
!!! ATCTTGATGAAATGATTTTT+GGG - chr7_2:67877482-67877501 Msa1071360:intron 20.0%
!!! TGCAATTTATGTTTGAAATA+TGG - chr7_2:67877718-67877737 Msa1071360:CDS 20.0%
!! GTTATACATATTCTAATGTT+TGG - chr7_2:67876483-67876502 Msa1071360:intron 20.0%
!!! AGTGAAATTGATATTTTCTA+TGG - chr7_2:67876615-67876634 Msa1071360:intron 20.0%
!!! GTGAAATTGATATTTTCTAT+GGG - chr7_2:67876616-67876635 Msa1071360:intron 20.0%
!!! AGCTAATGTAGATTTTTTTT+TGG - chr7_2:67876668-67876687 Msa1071360:intron 20.0%
!!! TTTATATGGGTTGATTATAT+GGG - chr7_2:67876763-67876782 Msa1071360:intron 20.0%
!! GATTATATGGGATATAATAA+TGG - chr7_2:67876775-67876794 Msa1071360:intron 20.0%
!!! ATGTGCTATTTATACTTAAT+TGG - chr7_2:67876819-67876838 Msa1071360:intron 20.0%
!! ATTATCAGTCAATTTCAAAT+CGG - chr7_2:67876893-67876912 Msa1071360:intron 20.0%
!! AATTTATGTATTCCTCATTT+GGG + chr7_2:67877044-67877063 None:intergenic 20.0%
!! AAATTTATGTATTCCTCATT+TGG + chr7_2:67877045-67877064 None:intergenic 20.0%
!!! AATGAGGAATACATAAATTT+TGG - chr7_2:67877045-67877064 Msa1071360:intron 20.0%
!! AATTTCATCATTAACATTCA+GGG + chr7_2:67877260-67877279 None:intergenic 20.0%
!! TGTTAATGATGAAATTCTAA+AGG - chr7_2:67877264-67877283 Msa1071360:intron 20.0%
!!! ATCTTGATGAAATGATTTTT+GGG - chr7_2:67877482-67877501 Msa1071360:intron 20.0%
!!! TGCAATTTATGTTTGAAATA+TGG - chr7_2:67877718-67877737 Msa1071360:CDS 20.0%
!! TTTGATGCACTCTTTTTATT+TGG - chr7_2:67875999-67876018 Msa1071360:CDS 25.0%
!!! TGGTTTTTGTCTTTGTTTTT+AGG - chr7_2:67876111-67876130 Msa1071360:CDS 25.0%
!!! GGTTTTTGTCTTTGTTTTTA+GGG - chr7_2:67876112-67876131 Msa1071360:CDS 25.0%
!!! TTTGTTTTTAGGGATTGTTT+AGG - chr7_2:67876122-67876141 Msa1071360:CDS 25.0%
! TTCCATAAAACAAGTAAAAC+AGG - chr7_2:67876282-67876301 Msa1071360:intron 25.0%
! TCCATAAAACAAGTAAAACA+GGG - chr7_2:67876283-67876302 Msa1071360:intron 25.0%
!! TATTCTAATGTTTGGGTTAT+TGG - chr7_2:67876491-67876510 Msa1071360:intron 25.0%
! AATTCACTTTCTTTAGATTC+TGG - chr7_2:67876694-67876713 Msa1071360:intron 25.0%
!!! GTTTATATGGGTTGATTATA+TGG - chr7_2:67876762-67876781 Msa1071360:intron 25.0%
!! TTTTCACAACTAAACATAGT+AGG + chr7_2:67876868-67876887 None:intergenic 25.0%
!!! AACAATTTTCCATTTTGGAA+GGG + chr7_2:67876989-67877008 None:intergenic 25.0%
!! AAACAATTTTCCATTTTGGA+AGG + chr7_2:67876990-67877009 None:intergenic 25.0%
!! TACGAAACAATTTTCCATTT+TGG + chr7_2:67876994-67877013 None:intergenic 25.0%
! TGGAAATAAAGATCACATTT+AGG + chr7_2:67877127-67877146 None:intergenic 25.0%
!! TAATGAAGCAATTCTTTTTG+AGG - chr7_2:67877234-67877253 Msa1071360:intron 25.0%
! GAATTTCATCATTAACATTC+AGG + chr7_2:67877261-67877280 None:intergenic 25.0%
!! GATCTTGATGAAATGATTTT+TGG - chr7_2:67877481-67877500 Msa1071360:intron 25.0%
!! TTTGATGCACTCTTTTTATT+TGG - chr7_2:67875999-67876018 Msa1071360:CDS 25.0%
!!! TGGTTTTTGTCTTTGTTTTT+AGG - chr7_2:67876111-67876130 Msa1071360:CDS 25.0%
!!! GGTTTTTGTCTTTGTTTTTA+GGG - chr7_2:67876112-67876131 Msa1071360:CDS 25.0%
!!! TTTGTTTTTAGGGATTGTTT+AGG - chr7_2:67876122-67876141 Msa1071360:CDS 25.0%
! TTCCATAAAACAAGTAAAAC+AGG - chr7_2:67876282-67876301 Msa1071360:intron 25.0%
! TCCATAAAACAAGTAAAACA+GGG - chr7_2:67876283-67876302 Msa1071360:intron 25.0%
!! TATTCTAATGTTTGGGTTAT+TGG - chr7_2:67876491-67876510 Msa1071360:intron 25.0%
! AATTCACTTTCTTTAGATTC+TGG - chr7_2:67876694-67876713 Msa1071360:intron 25.0%
!!! GTTTATATGGGTTGATTATA+TGG - chr7_2:67876762-67876781 Msa1071360:intron 25.0%
!! TTTTCACAACTAAACATAGT+AGG + chr7_2:67876868-67876887 None:intergenic 25.0%
!!! AACAATTTTCCATTTTGGAA+GGG + chr7_2:67876989-67877008 None:intergenic 25.0%
!! AAACAATTTTCCATTTTGGA+AGG + chr7_2:67876990-67877009 None:intergenic 25.0%
!! TACGAAACAATTTTCCATTT+TGG + chr7_2:67876994-67877013 None:intergenic 25.0%
! TGGAAATAAAGATCACATTT+AGG + chr7_2:67877127-67877146 None:intergenic 25.0%
!! TAATGAAGCAATTCTTTTTG+AGG - chr7_2:67877234-67877253 Msa1071360:intron 25.0%
! GAATTTCATCATTAACATTC+AGG + chr7_2:67877261-67877280 None:intergenic 25.0%
!! GATCTTGATGAAATGATTTT+TGG - chr7_2:67877481-67877500 Msa1071360:intron 25.0%
! TAAAAAGAGTGCATCAAACA+CGG + chr7_2:67875997-67876016 None:intergenic 30.0%
AAAACAAAGACAAAAACCAC+AGG + chr7_2:67876110-67876129 None:intergenic 30.0%
! GGTATATAACTTTAGAGGAA+GGG - chr7_2:67876177-67876196 Msa1071360:CDS 30.0%
TGGAATTTCCTAAAATCAGA+GGG + chr7_2:67876267-67876286 None:intergenic 30.0%
ATGGAATTTCCTAAAATCAG+AGG + chr7_2:67876268-67876287 None:intergenic 30.0%
!!! ACCCTGTTTTACTTGTTTTA+TGG + chr7_2:67876287-67876306 None:intergenic 30.0%
TATATAAATCTCTCGAGCAA+AGG - chr7_2:67876348-67876367 Msa1071360:intron 30.0%
ATATAAATCTCTCGAGCAAA+GGG - chr7_2:67876349-67876368 Msa1071360:intron 30.0%
! ATGGTTGGGTATTGTTTATA+TGG - chr7_2:67876749-67876768 Msa1071360:intron 30.0%
! TGGTTGGGTATTGTTTATAT+GGG - chr7_2:67876750-67876769 Msa1071360:intron 30.0%
CTAAGATAGTAACTTGATCA+CGG - chr7_2:67876933-67876952 Msa1071360:intron 30.0%
GAATGTACAGAAATCATACA+AGG + chr7_2:67876959-67876978 None:intergenic 30.0%
! TGATCTTTATTTCCATCTAC+AGG - chr7_2:67877132-67877151 Msa1071360:intron 30.0%
!! ATGATTTTTGGGAGTAAAGT+TGG - chr7_2:67877493-67877512 Msa1071360:intron 30.0%
!! TGATTTTTGGGAGTAAAGTT+GGG - chr7_2:67877494-67877513 Msa1071360:intron 30.0%
TGGTATATAAGTTCTTGACA+AGG - chr7_2:67877738-67877757 Msa1071360:CDS 30.0%
ATAAGTTCTTGACAAGGTAT+AGG - chr7_2:67877744-67877763 Msa1071360:CDS 30.0%
TGAGATATCTGAAGAAACAA+TGG - chr7_2:67877770-67877789 Msa1071360:CDS 30.0%
GAGATATCTGAAGAAACAAT+GGG - chr7_2:67877771-67877790 Msa1071360:CDS 30.0%
! TAAAAAGAGTGCATCAAACA+CGG + chr7_2:67875997-67876016 None:intergenic 30.0%
AAAACAAAGACAAAAACCAC+AGG + chr7_2:67876110-67876129 None:intergenic 30.0%
! GGTATATAACTTTAGAGGAA+GGG - chr7_2:67876177-67876196 Msa1071360:CDS 30.0%
TGGAATTTCCTAAAATCAGA+GGG + chr7_2:67876267-67876286 None:intergenic 30.0%
ATGGAATTTCCTAAAATCAG+AGG + chr7_2:67876268-67876287 None:intergenic 30.0%
!!! ACCCTGTTTTACTTGTTTTA+TGG + chr7_2:67876287-67876306 None:intergenic 30.0%
TATATAAATCTCTCGAGCAA+AGG - chr7_2:67876348-67876367 Msa1071360:intron 30.0%
ATATAAATCTCTCGAGCAAA+GGG - chr7_2:67876349-67876368 Msa1071360:intron 30.0%
! ATGGTTGGGTATTGTTTATA+TGG - chr7_2:67876749-67876768 Msa1071360:intron 30.0%
! TGGTTGGGTATTGTTTATAT+GGG - chr7_2:67876750-67876769 Msa1071360:intron 30.0%
CTAAGATAGTAACTTGATCA+CGG - chr7_2:67876933-67876952 Msa1071360:intron 30.0%
GAATGTACAGAAATCATACA+AGG + chr7_2:67876959-67876978 None:intergenic 30.0%
! TGATCTTTATTTCCATCTAC+AGG - chr7_2:67877132-67877151 Msa1071360:intron 30.0%
!! ATGATTTTTGGGAGTAAAGT+TGG - chr7_2:67877493-67877512 Msa1071360:intron 30.0%
!! TGATTTTTGGGAGTAAAGTT+GGG - chr7_2:67877494-67877513 Msa1071360:intron 30.0%
TGGTATATAAGTTCTTGACA+AGG - chr7_2:67877738-67877757 Msa1071360:CDS 30.0%
ATAAGTTCTTGACAAGGTAT+AGG - chr7_2:67877744-67877763 Msa1071360:CDS 30.0%
TGAGATATCTGAAGAAACAA+TGG - chr7_2:67877770-67877789 Msa1071360:CDS 30.0%
GAGATATCTGAAGAAACAAT+GGG - chr7_2:67877771-67877790 Msa1071360:CDS 30.0%
CTTGTTAGCAGTTGTTTATG+AGG - chr7_2:67875643-67875662 Msa1071360:three_prime_UTR 35.0%
! TTTGCAGAGTTTGAGATCAA+GGG - chr7_2:67875679-67875698 Msa1071360:three_prime_UTR 35.0%
TTATACAGAAGAACAGACGA+AGG - chr7_2:67875835-67875854 Msa1071360:three_prime_UTR 35.0%
! ACTATTTCTCGCAACATCAA+AGG + chr7_2:67875864-67875883 None:intergenic 35.0%
TGAAGTAGAATGTTGTGTTG+CGG - chr7_2:67876029-67876048 Msa1071360:CDS 35.0%
TTTAGGGATTGTTTAGGAGT+TGG - chr7_2:67876128-67876147 Msa1071360:CDS 35.0%
TTAGGGATTGTTTAGGAGTT+GGG - chr7_2:67876129-67876148 Msa1071360:CDS 35.0%
ATTGTTTAGGAGTTGGGATA+TGG - chr7_2:67876135-67876154 Msa1071360:CDS 35.0%
TTGTTTAGGAGTTGGGATAT+GGG - chr7_2:67876136-67876155 Msa1071360:CDS 35.0%
! GGAAGGGTATATAACTTTAG+AGG - chr7_2:67876172-67876191 Msa1071360:CDS 35.0%
! GGGTATATAACTTTAGAGGA+AGG - chr7_2:67876176-67876195 Msa1071360:CDS 35.0%
! TATAACTTTAGAGGAAGGGA+AGG - chr7_2:67876181-67876200 Msa1071360:CDS 35.0%
! ATAACTTTAGAGGAAGGGAA+GGG - chr7_2:67876182-67876201 Msa1071360:CDS 35.0%
GGAATTTCCTAAAATCAGAG+GGG + chr7_2:67876266-67876285 None:intergenic 35.0%
CTCGAGAGATTTATATAGTG+GGG + chr7_2:67876345-67876364 None:intergenic 35.0%
GCTCGAGAGATTTATATAGT+GGG + chr7_2:67876346-67876365 None:intergenic 35.0%
TGCTCGAGAGATTTATATAG+TGG + chr7_2:67876347-67876366 None:intergenic 35.0%
TGGGTTATTGGACTATTTAC+AGG - chr7_2:67876503-67876522 Msa1071360:intron 35.0%
GGGTTATTGGACTATTTACA+GGG - chr7_2:67876504-67876523 Msa1071360:intron 35.0%
TGGACTATTTACAGGGTTAT+TGG - chr7_2:67876511-67876530 Msa1071360:intron 35.0%
TCTCTCAACTATCTCAAAAG+AGG + chr7_2:67876596-67876615 None:intergenic 35.0%
AGTAGGATAAGTTCTTCTGT+GGG + chr7_2:67876851-67876870 None:intergenic 35.0%
TAGTAGGATAAGTTCTTCTG+TGG + chr7_2:67876852-67876871 None:intergenic 35.0%
!! AATTTTCCATTTTGGAAGGG+TGG + chr7_2:67876986-67877005 None:intergenic 35.0%
AATATGCTCATTCCCTAACA+TGG + chr7_2:67877083-67877102 None:intergenic 35.0%
AAAGGTTCTTACCAAGTATG+AGG - chr7_2:67877282-67877301 Msa1071360:intron 35.0%
!! GATTTTTGGGAGTAAAGTTG+GGG - chr7_2:67877495-67877514 Msa1071360:intron 35.0%
!! ATTTTTGGGAGTAAAGTTGG+GGG - chr7_2:67877496-67877515 Msa1071360:intron 35.0%
TATTAGTAGTGCAGCTTAGA+AGG + chr7_2:67877578-67877597 None:intergenic 35.0%
AGTACGTTAAAGATAGTCCA+AGG + chr7_2:67877606-67877625 None:intergenic 35.0%
TCTTCATGATTTCAGATTGC+TGG - chr7_2:67877660-67877679 Msa1071360:CDS 35.0%
CTTGTTAGCAGTTGTTTATG+AGG - chr7_2:67875643-67875662 Msa1071360:three_prime_UTR 35.0%
! TTTGCAGAGTTTGAGATCAA+GGG - chr7_2:67875679-67875698 Msa1071360:three_prime_UTR 35.0%
TTATACAGAAGAACAGACGA+AGG - chr7_2:67875835-67875854 Msa1071360:three_prime_UTR 35.0%
! ACTATTTCTCGCAACATCAA+AGG + chr7_2:67875864-67875883 None:intergenic 35.0%
TGAAGTAGAATGTTGTGTTG+CGG - chr7_2:67876029-67876048 Msa1071360:CDS 35.0%
TTTAGGGATTGTTTAGGAGT+TGG - chr7_2:67876128-67876147 Msa1071360:CDS 35.0%
TTAGGGATTGTTTAGGAGTT+GGG - chr7_2:67876129-67876148 Msa1071360:CDS 35.0%
ATTGTTTAGGAGTTGGGATA+TGG - chr7_2:67876135-67876154 Msa1071360:CDS 35.0%
TTGTTTAGGAGTTGGGATAT+GGG - chr7_2:67876136-67876155 Msa1071360:CDS 35.0%
! GGAAGGGTATATAACTTTAG+AGG - chr7_2:67876172-67876191 Msa1071360:CDS 35.0%
! GGGTATATAACTTTAGAGGA+AGG - chr7_2:67876176-67876195 Msa1071360:CDS 35.0%
! TATAACTTTAGAGGAAGGGA+AGG - chr7_2:67876181-67876200 Msa1071360:CDS 35.0%
! ATAACTTTAGAGGAAGGGAA+GGG - chr7_2:67876182-67876201 Msa1071360:CDS 35.0%
GGAATTTCCTAAAATCAGAG+GGG + chr7_2:67876266-67876285 None:intergenic 35.0%
CTCGAGAGATTTATATAGTG+GGG + chr7_2:67876345-67876364 None:intergenic 35.0%
GCTCGAGAGATTTATATAGT+GGG + chr7_2:67876346-67876365 None:intergenic 35.0%
TGCTCGAGAGATTTATATAG+TGG + chr7_2:67876347-67876366 None:intergenic 35.0%
TGGGTTATTGGACTATTTAC+AGG - chr7_2:67876503-67876522 Msa1071360:intron 35.0%
GGGTTATTGGACTATTTACA+GGG - chr7_2:67876504-67876523 Msa1071360:intron 35.0%
TGGACTATTTACAGGGTTAT+TGG - chr7_2:67876511-67876530 Msa1071360:intron 35.0%
TCTCTCAACTATCTCAAAAG+AGG + chr7_2:67876596-67876615 None:intergenic 35.0%
AGTAGGATAAGTTCTTCTGT+GGG + chr7_2:67876851-67876870 None:intergenic 35.0%
TAGTAGGATAAGTTCTTCTG+TGG + chr7_2:67876852-67876871 None:intergenic 35.0%
!! AATTTTCCATTTTGGAAGGG+TGG + chr7_2:67876986-67877005 None:intergenic 35.0%
AATATGCTCATTCCCTAACA+TGG + chr7_2:67877083-67877102 None:intergenic 35.0%
AAAGGTTCTTACCAAGTATG+AGG - chr7_2:67877282-67877301 Msa1071360:intron 35.0%
!! GATTTTTGGGAGTAAAGTTG+GGG - chr7_2:67877495-67877514 Msa1071360:intron 35.0%
!! ATTTTTGGGAGTAAAGTTGG+GGG - chr7_2:67877496-67877515 Msa1071360:intron 35.0%
TATTAGTAGTGCAGCTTAGA+AGG + chr7_2:67877578-67877597 None:intergenic 35.0%
AGTACGTTAAAGATAGTCCA+AGG + chr7_2:67877606-67877625 None:intergenic 35.0%
TCTTCATGATTTCAGATTGC+TGG - chr7_2:67877660-67877679 Msa1071360:CDS 35.0%
! GTTTGCAGAGTTTGAGATCA+AGG - chr7_2:67875678-67875697 Msa1071360:three_prime_UTR 40.0%
! TTGCAGAGTTTGAGATCAAG+GGG - chr7_2:67875680-67875699 Msa1071360:three_prime_UTR 40.0%
!! GTTTGAGATCAAGGGGTATT+AGG - chr7_2:67875687-67875706 Msa1071360:three_prime_UTR 40.0%
AAGCTTTCATTATCACGACC+AGG + chr7_2:67875716-67875735 None:intergenic 40.0%
! TGGTCGTGATAATGAAAGCT+TGG - chr7_2:67875715-67875734 Msa1071360:three_prime_UTR 40.0%
GATATGGGAGGGAAATAGAA+TGG - chr7_2:67876151-67876170 Msa1071360:CDS 40.0%
AAAAAGGGGAAGGGAAAAAG+AGG - chr7_2:67876205-67876224 Msa1071360:CDS 40.0%
! GTCAAAACCCCTCTGATTTT+AGG - chr7_2:67876256-67876275 Msa1071360:CDS 40.0%
! TATAGTGGGGAGTAGTGTTT+GGG + chr7_2:67876332-67876351 None:intergenic 40.0%
! ATATAGTGGGGAGTAGTGTT+TGG + chr7_2:67876333-67876352 None:intergenic 40.0%
! TTGCGAGAGGCATATAGTTA+TGG + chr7_2:67876384-67876403 None:intergenic 40.0%
CATATACCAAAGGCTATGTC+GGG + chr7_2:67876416-67876435 None:intergenic 40.0%
GCATATACCAAAGGCTATGT+CGG + chr7_2:67876417-67876436 None:intergenic 40.0%
CTGACAAGTGCATATACCAA+AGG + chr7_2:67876426-67876445 None:intergenic 40.0%
TTGGTATATGCACTTGTCAG+AGG - chr7_2:67876426-67876445 Msa1071360:intron 40.0%
! CATGTCTTATTGTGGTCAAG+GGG + chr7_2:67876732-67876751 None:intergenic 40.0%
! CCATGTCTTATTGTGGTCAA+GGG + chr7_2:67876733-67876752 None:intergenic 40.0%
! ACCATGTCTTATTGTGGTCA+AGG + chr7_2:67876734-67876753 None:intergenic 40.0%
TGACCACAATAAGACATGGT+TGG - chr7_2:67876734-67876753 Msa1071360:intron 40.0%
GACCACAATAAGACATGGTT+GGG - chr7_2:67876735-67876754 Msa1071360:intron 40.0%
! TACCCAACCATGTCTTATTG+TGG + chr7_2:67876740-67876759 None:intergenic 40.0%
CCAGTCAATGTTCCATGTTA+GGG - chr7_2:67877068-67877087 Msa1071360:intron 40.0%
AGCGTATTGTTGAAACTGCT+GGG - chr7_2:67877209-67877228 Msa1071360:intron 40.0%
TGGTTTCAACTCCTCATACT+TGG + chr7_2:67877296-67877315 None:intergenic 40.0%
!! GCATCTTGATGATGCTAAAG+AGG - chr7_2:67877387-67877406 Msa1071360:intron 40.0%
AGGGAACAATGATGACATGA+TGG - chr7_2:67877456-67877475 Msa1071360:intron 40.0%
GCACTACTAATAATCGACCT+TGG - chr7_2:67877586-67877605 Msa1071360:CDS 40.0%
! GTTTGCAGAGTTTGAGATCA+AGG - chr7_2:67875678-67875697 Msa1071360:three_prime_UTR 40.0%
! TTGCAGAGTTTGAGATCAAG+GGG - chr7_2:67875680-67875699 Msa1071360:three_prime_UTR 40.0%
!! GTTTGAGATCAAGGGGTATT+AGG - chr7_2:67875687-67875706 Msa1071360:three_prime_UTR 40.0%
AAGCTTTCATTATCACGACC+AGG + chr7_2:67875716-67875735 None:intergenic 40.0%
! TGGTCGTGATAATGAAAGCT+TGG - chr7_2:67875715-67875734 Msa1071360:three_prime_UTR 40.0%
GATATGGGAGGGAAATAGAA+TGG - chr7_2:67876151-67876170 Msa1071360:CDS 40.0%
AAAAAGGGGAAGGGAAAAAG+AGG - chr7_2:67876205-67876224 Msa1071360:CDS 40.0%
! GTCAAAACCCCTCTGATTTT+AGG - chr7_2:67876256-67876275 Msa1071360:CDS 40.0%
! TATAGTGGGGAGTAGTGTTT+GGG + chr7_2:67876332-67876351 None:intergenic 40.0%
! ATATAGTGGGGAGTAGTGTT+TGG + chr7_2:67876333-67876352 None:intergenic 40.0%
! TTGCGAGAGGCATATAGTTA+TGG + chr7_2:67876384-67876403 None:intergenic 40.0%
CATATACCAAAGGCTATGTC+GGG + chr7_2:67876416-67876435 None:intergenic 40.0%
GCATATACCAAAGGCTATGT+CGG + chr7_2:67876417-67876436 None:intergenic 40.0%
CTGACAAGTGCATATACCAA+AGG + chr7_2:67876426-67876445 None:intergenic 40.0%
TTGGTATATGCACTTGTCAG+AGG - chr7_2:67876426-67876445 Msa1071360:intron 40.0%
! CATGTCTTATTGTGGTCAAG+GGG + chr7_2:67876732-67876751 None:intergenic 40.0%
! CCATGTCTTATTGTGGTCAA+GGG + chr7_2:67876733-67876752 None:intergenic 40.0%
! ACCATGTCTTATTGTGGTCA+AGG + chr7_2:67876734-67876753 None:intergenic 40.0%
TGACCACAATAAGACATGGT+TGG - chr7_2:67876734-67876753 Msa1071360:intron 40.0%
GACCACAATAAGACATGGTT+GGG - chr7_2:67876735-67876754 Msa1071360:intron 40.0%
! TACCCAACCATGTCTTATTG+TGG + chr7_2:67876740-67876759 None:intergenic 40.0%
CCAGTCAATGTTCCATGTTA+GGG - chr7_2:67877068-67877087 Msa1071360:intron 40.0%
AGCGTATTGTTGAAACTGCT+GGG - chr7_2:67877209-67877228 Msa1071360:intron 40.0%
TGGTTTCAACTCCTCATACT+TGG + chr7_2:67877296-67877315 None:intergenic 40.0%
!! GCATCTTGATGATGCTAAAG+AGG - chr7_2:67877387-67877406 Msa1071360:intron 40.0%
AGGGAACAATGATGACATGA+TGG - chr7_2:67877456-67877475 Msa1071360:intron 40.0%
GCACTACTAATAATCGACCT+TGG - chr7_2:67877586-67877605 Msa1071360:CDS 40.0%
!! TCAAGGGGTATTAGGTTTCC+TGG - chr7_2:67875695-67875714 Msa1071360:three_prime_UTR 45.0%
GATCGAGGAGGAGTGAAAAT+TGG + chr7_2:67875743-67875762 None:intergenic 45.0%
GGAATATCATCCACATGAGG+TGG + chr7_2:67875782-67875801 None:intergenic 45.0%
TATTCCGCGTCAATTTCAGC+AGG - chr7_2:67875796-67875815 Msa1071360:three_prime_UTR 45.0%
ACATCCTGCTGAAATTGACG+CGG + chr7_2:67875803-67875822 None:intergenic 45.0%
TCTTCTGTATAACCCTGCAC+AGG + chr7_2:67875827-67875846 None:intergenic 45.0%
GTTATCATCTTCACCGCAAC+AGG - chr7_2:67875904-67875923 Msa1071360:CDS 45.0%
ACCTGCAAAACATCCTGTTG+CGG + chr7_2:67875920-67875939 None:intergenic 45.0%
GTTGTGTTGCGGATAGATCA+TGG - chr7_2:67876040-67876059 Msa1071360:CDS 45.0%
TGTTGCGGATAGATCATGGT+AGG - chr7_2:67876044-67876063 Msa1071360:CDS 45.0%
! ATTGACCGCGACAACTGTTT+TGG - chr7_2:67876084-67876103 Msa1071360:CDS 45.0%
TTTAGGAGTTGGGATATGGG+AGG - chr7_2:67876139-67876158 Msa1071360:CDS 45.0%
TTAGGAGTTGGGATATGGGA+GGG - chr7_2:67876140-67876159 Msa1071360:CDS 45.0%
TGGGAGGGAAATAGAATGGA+AGG - chr7_2:67876155-67876174 Msa1071360:CDS 45.0%
GGGAGGGAAATAGAATGGAA+GGG - chr7_2:67876156-67876175 Msa1071360:CDS 45.0%
TAGAGGAAGGGAAGGGAAAA+AGG - chr7_2:67876189-67876208 Msa1071360:CDS 45.0%
AGAGGAAGGGAAGGGAAAAA+GGG - chr7_2:67876190-67876209 Msa1071360:CDS 45.0%
!!! GGGGTTTTGACTTGCAAACA+AGG + chr7_2:67876247-67876266 None:intergenic 45.0%
CCCTTGACCACAATAAGACA+TGG - chr7_2:67876730-67876749 Msa1071360:intron 45.0%
TCATCTCCACCCTTCCAAAA+TGG - chr7_2:67876977-67876996 Msa1071360:intron 45.0%
CCTCATTTGGGAAGCTTACA+AGG + chr7_2:67877032-67877051 None:intergenic 45.0%
CCTTGTAAGCTTCCCAAATG+AGG - chr7_2:67877029-67877048 Msa1071360:intron 45.0%
GCCAGTCAATGTTCCATGTT+AGG - chr7_2:67877067-67877086 Msa1071360:intron 45.0%
CCCTAACATGGAACATTGAC+TGG + chr7_2:67877071-67877090 None:intergenic 45.0%
GGGAATGAGCATATTGTACC+AGG - chr7_2:67877088-67877107 Msa1071360:intron 45.0%
TTAGGTAACTCACAGATGCC+TGG + chr7_2:67877109-67877128 None:intergenic 45.0%
CGGTCAAATCATCCTGTAGA+TGG + chr7_2:67877147-67877166 None:intergenic 45.0%
CAGCAGTTTCAACAATACGC+TGG + chr7_2:67877210-67877229 None:intergenic 45.0%
CAGCGTATTGTTGAAACTGC+TGG - chr7_2:67877208-67877227 Msa1071360:intron 45.0%
GCGTATTGTTGAAACTGCTG+GGG - chr7_2:67877210-67877229 Msa1071360:intron 45.0%
!! ATAGCTGGTTCAGGTTGAAG+TGG + chr7_2:67877331-67877350 None:intergenic 45.0%
! ACAGGTATCATAGCTGGTTC+AGG + chr7_2:67877340-67877359 None:intergenic 45.0%
ACAGCAACAGGTATCATAGC+TGG + chr7_2:67877346-67877365 None:intergenic 45.0%
TTAGCATCATCAAGATGCCG+AGG + chr7_2:67877385-67877404 None:intergenic 45.0%
TCCTTGATTAGAAAGCCAGC+TGG - chr7_2:67877412-67877431 Msa1071360:intron 45.0%
!! TCCAGCTGGCTTTCTAATCA+AGG + chr7_2:67877416-67877435 None:intergenic 45.0%
!! TCAAGGGGTATTAGGTTTCC+TGG - chr7_2:67875695-67875714 Msa1071360:three_prime_UTR 45.0%
GATCGAGGAGGAGTGAAAAT+TGG + chr7_2:67875743-67875762 None:intergenic 45.0%
GGAATATCATCCACATGAGG+TGG + chr7_2:67875782-67875801 None:intergenic 45.0%
TATTCCGCGTCAATTTCAGC+AGG - chr7_2:67875796-67875815 Msa1071360:three_prime_UTR 45.0%
ACATCCTGCTGAAATTGACG+CGG + chr7_2:67875803-67875822 None:intergenic 45.0%
TCTTCTGTATAACCCTGCAC+AGG + chr7_2:67875827-67875846 None:intergenic 45.0%
GTTATCATCTTCACCGCAAC+AGG - chr7_2:67875904-67875923 Msa1071360:CDS 45.0%
ACCTGCAAAACATCCTGTTG+CGG + chr7_2:67875920-67875939 None:intergenic 45.0%
GTTGTGTTGCGGATAGATCA+TGG - chr7_2:67876040-67876059 Msa1071360:CDS 45.0%
TGTTGCGGATAGATCATGGT+AGG - chr7_2:67876044-67876063 Msa1071360:CDS 45.0%
! ATTGACCGCGACAACTGTTT+TGG - chr7_2:67876084-67876103 Msa1071360:CDS 45.0%
TTTAGGAGTTGGGATATGGG+AGG - chr7_2:67876139-67876158 Msa1071360:CDS 45.0%
TTAGGAGTTGGGATATGGGA+GGG - chr7_2:67876140-67876159 Msa1071360:CDS 45.0%
TGGGAGGGAAATAGAATGGA+AGG - chr7_2:67876155-67876174 Msa1071360:CDS 45.0%
GGGAGGGAAATAGAATGGAA+GGG - chr7_2:67876156-67876175 Msa1071360:CDS 45.0%
TAGAGGAAGGGAAGGGAAAA+AGG - chr7_2:67876189-67876208 Msa1071360:CDS 45.0%
AGAGGAAGGGAAGGGAAAAA+GGG - chr7_2:67876190-67876209 Msa1071360:CDS 45.0%
!!! GGGGTTTTGACTTGCAAACA+AGG + chr7_2:67876247-67876266 None:intergenic 45.0%
CCCTTGACCACAATAAGACA+TGG - chr7_2:67876730-67876749 Msa1071360:intron 45.0%
TCATCTCCACCCTTCCAAAA+TGG - chr7_2:67876977-67876996 Msa1071360:intron 45.0%
CCTCATTTGGGAAGCTTACA+AGG + chr7_2:67877032-67877051 None:intergenic 45.0%
CCTTGTAAGCTTCCCAAATG+AGG - chr7_2:67877029-67877048 Msa1071360:intron 45.0%
GCCAGTCAATGTTCCATGTT+AGG - chr7_2:67877067-67877086 Msa1071360:intron 45.0%
CCCTAACATGGAACATTGAC+TGG + chr7_2:67877071-67877090 None:intergenic 45.0%
GGGAATGAGCATATTGTACC+AGG - chr7_2:67877088-67877107 Msa1071360:intron 45.0%
TTAGGTAACTCACAGATGCC+TGG + chr7_2:67877109-67877128 None:intergenic 45.0%
CGGTCAAATCATCCTGTAGA+TGG + chr7_2:67877147-67877166 None:intergenic 45.0%
CAGCAGTTTCAACAATACGC+TGG + chr7_2:67877210-67877229 None:intergenic 45.0%
CAGCGTATTGTTGAAACTGC+TGG - chr7_2:67877208-67877227 Msa1071360:intron 45.0%
GCGTATTGTTGAAACTGCTG+GGG - chr7_2:67877210-67877229 Msa1071360:intron 45.0%
!! ATAGCTGGTTCAGGTTGAAG+TGG + chr7_2:67877331-67877350 None:intergenic 45.0%
! ACAGGTATCATAGCTGGTTC+AGG + chr7_2:67877340-67877359 None:intergenic 45.0%
ACAGCAACAGGTATCATAGC+TGG + chr7_2:67877346-67877365 None:intergenic 45.0%
TTAGCATCATCAAGATGCCG+AGG + chr7_2:67877385-67877404 None:intergenic 45.0%
TCCTTGATTAGAAAGCCAGC+TGG - chr7_2:67877412-67877431 Msa1071360:intron 45.0%
!! TCCAGCTGGCTTTCTAATCA+AGG + chr7_2:67877416-67877435 None:intergenic 45.0%
CGCGGAATATCATCCACATG+AGG + chr7_2:67875785-67875804 None:intergenic 50.0%
! ACCGCAACAGGATGTTTTGC+AGG - chr7_2:67875916-67875935 Msa1071360:CDS 50.0%
ACAGGCCAAAACAGTTGTCG+CGG + chr7_2:67876092-67876111 None:intergenic 50.0%
GAGGAAGGGAAGGGAAAAAG+GGG - chr7_2:67876191-67876210 Msa1071360:CDS 50.0%
AAGGGAAGGGAAAAAGGGGA+AGG - chr7_2:67876195-67876214 Msa1071360:CDS 50.0%
AGGGAAGGGAAAAAGGGGAA+GGG - chr7_2:67876196-67876215 Msa1071360:CDS 50.0%
AGGGGAAGGGAAAAAGAGGA+AGG - chr7_2:67876209-67876228 Msa1071360:CDS 50.0%
GGGGAAGGGAAAAAGAGGAA+GGG - chr7_2:67876210-67876229 Msa1071360:CDS 50.0%
ACACTGCTGTACAAGTGTGG+CGG + chr7_2:67877167-67877186 None:intergenic 50.0%
ACGACACTGCTGTACAAGTG+TGG + chr7_2:67877170-67877189 None:intergenic 50.0%
!! TCAGGTTGAAGTGGAGCAAC+TGG + chr7_2:67877322-67877341 None:intergenic 50.0%
TGTCATCATTGTTCCCTCCC+TGG + chr7_2:67877453-67877472 None:intergenic 50.0%
CGCGGAATATCATCCACATG+AGG + chr7_2:67875785-67875804 None:intergenic 50.0%
! ACCGCAACAGGATGTTTTGC+AGG - chr7_2:67875916-67875935 Msa1071360:CDS 50.0%
ACAGGCCAAAACAGTTGTCG+CGG + chr7_2:67876092-67876111 None:intergenic 50.0%
GAGGAAGGGAAGGGAAAAAG+GGG - chr7_2:67876191-67876210 Msa1071360:CDS 50.0%
AAGGGAAGGGAAAAAGGGGA+AGG - chr7_2:67876195-67876214 Msa1071360:CDS 50.0%
AGGGAAGGGAAAAAGGGGAA+GGG - chr7_2:67876196-67876215 Msa1071360:CDS 50.0%
AGGGGAAGGGAAAAAGAGGA+AGG - chr7_2:67876209-67876228 Msa1071360:CDS 50.0%
GGGGAAGGGAAAAAGAGGAA+GGG - chr7_2:67876210-67876229 Msa1071360:CDS 50.0%
ACACTGCTGTACAAGTGTGG+CGG + chr7_2:67877167-67877186 None:intergenic 50.0%
ACGACACTGCTGTACAAGTG+TGG + chr7_2:67877170-67877189 None:intergenic 50.0%
!! TCAGGTTGAAGTGGAGCAAC+TGG + chr7_2:67877322-67877341 None:intergenic 50.0%
TGTCATCATTGTTCCCTCCC+TGG + chr7_2:67877453-67877472 None:intergenic 50.0%
TCTGGCACAGTAGCTGATCG+AGG + chr7_2:67875758-67875777 None:intergenic 55.0%
TCATCCACATGAGGTGGCTC+TGG + chr7_2:67875776-67875795 None:intergenic 55.0%
TCAGCAGGATGTTCCTGTGC+AGG - chr7_2:67875811-67875830 Msa1071360:three_prime_UTR 55.0%
CAGCAGGATGTTCCTGTGCA+GGG - chr7_2:67875812-67875831 Msa1071360:three_prime_UTR 55.0%
!!! GCGACAACTGTTTTGGCCTG+TGG - chr7_2:67876091-67876110 Msa1071360:CDS 55.0%
AAAGGCTATGTCGGGCGAAG+GGG + chr7_2:67876408-67876427 None:intergenic 55.0%
CAAAGGCTATGTCGGGCGAA+GGG + chr7_2:67876409-67876428 None:intergenic 55.0%
TGAAGTGGAGCAACTGGAGG+TGG + chr7_2:67877316-67877335 None:intergenic 55.0%
GGTTGAAGTGGAGCAACTGG+AGG + chr7_2:67877319-67877338 None:intergenic 55.0%
! TCATCTGGCTCGACAGCAAC+AGG + chr7_2:67877358-67877377 None:intergenic 55.0%
TCGAGCCAGATGAGTCACCT+CGG - chr7_2:67877365-67877384 Msa1071360:intron 55.0%
AGATGCCGAGGTGACTCATC+TGG + chr7_2:67877373-67877392 None:intergenic 55.0%
AAGCCAGCTGGATCAAGACC+TGG - chr7_2:67877424-67877443 Msa1071360:intron 55.0%
ACACCAGGTCTTGATCCAGC+TGG + chr7_2:67877430-67877449 None:intergenic 55.0%
TGGATCAAGACCTGGTGTCC+AGG - chr7_2:67877432-67877451 Msa1071360:intron 55.0%
GGATCAAGACCTGGTGTCCA+GGG - chr7_2:67877433-67877452 Msa1071360:intron 55.0%
! AAAGTTGGGGGCGCATCAGA+TGG - chr7_2:67877508-67877527 Msa1071360:CDS 55.0%
TCTGGCACAGTAGCTGATCG+AGG + chr7_2:67875758-67875777 None:intergenic 55.0%
TCATCCACATGAGGTGGCTC+TGG + chr7_2:67875776-67875795 None:intergenic 55.0%
TCAGCAGGATGTTCCTGTGC+AGG - chr7_2:67875811-67875830 Msa1071360:three_prime_UTR 55.0%
CAGCAGGATGTTCCTGTGCA+GGG - chr7_2:67875812-67875831 Msa1071360:three_prime_UTR 55.0%
!!! GCGACAACTGTTTTGGCCTG+TGG - chr7_2:67876091-67876110 Msa1071360:CDS 55.0%
AAAGGCTATGTCGGGCGAAG+GGG + chr7_2:67876408-67876427 None:intergenic 55.0%
CAAAGGCTATGTCGGGCGAA+GGG + chr7_2:67876409-67876428 None:intergenic 55.0%
TGAAGTGGAGCAACTGGAGG+TGG + chr7_2:67877316-67877335 None:intergenic 55.0%
GGTTGAAGTGGAGCAACTGG+AGG + chr7_2:67877319-67877338 None:intergenic 55.0%
! TCATCTGGCTCGACAGCAAC+AGG + chr7_2:67877358-67877377 None:intergenic 55.0%
TCGAGCCAGATGAGTCACCT+CGG - chr7_2:67877365-67877384 Msa1071360:intron 55.0%
AGATGCCGAGGTGACTCATC+TGG + chr7_2:67877373-67877392 None:intergenic 55.0%
AAGCCAGCTGGATCAAGACC+TGG - chr7_2:67877424-67877443 Msa1071360:intron 55.0%
ACACCAGGTCTTGATCCAGC+TGG + chr7_2:67877430-67877449 None:intergenic 55.0%
TGGATCAAGACCTGGTGTCC+AGG - chr7_2:67877432-67877451 Msa1071360:intron 55.0%
GGATCAAGACCTGGTGTCCA+GGG - chr7_2:67877433-67877452 Msa1071360:intron 55.0%
! AAAGTTGGGGGCGCATCAGA+TGG - chr7_2:67877508-67877527 Msa1071360:CDS 55.0%
GGCACAGTAGCTGATCGAGG+AGG + chr7_2:67875755-67875774 None:intergenic 60.0%
TGTGCCAGAGCCACCTCATG+TGG - chr7_2:67875769-67875788 Msa1071360:three_prime_UTR 60.0%
AAGGCTATGTCGGGCGAAGG+GGG + chr7_2:67876407-67876426 None:intergenic 60.0%
CCAAAGGCTATGTCGGGCGA+AGG + chr7_2:67876410-67876429 None:intergenic 60.0%
CCTTCGCCCGACATAGCCTT+TGG - chr7_2:67876407-67876426 Msa1071360:intron 60.0%
TCAAGACCTGGTGTCCAGGG+AGG - chr7_2:67877436-67877455 Msa1071360:intron 60.0%
CAAGACCTGGTGTCCAGGGA+GGG - chr7_2:67877437-67877456 Msa1071360:intron 60.0%
TTGTTCCCTCCCTGGACACC+AGG + chr7_2:67877445-67877464 None:intergenic 60.0%
GGCACAGTAGCTGATCGAGG+AGG + chr7_2:67875755-67875774 None:intergenic 60.0%
TGTGCCAGAGCCACCTCATG+TGG - chr7_2:67875769-67875788 Msa1071360:three_prime_UTR 60.0%
AAGGCTATGTCGGGCGAAGG+GGG + chr7_2:67876407-67876426 None:intergenic 60.0%
CCAAAGGCTATGTCGGGCGA+AGG + chr7_2:67876410-67876429 None:intergenic 60.0%
CCTTCGCCCGACATAGCCTT+TGG - chr7_2:67876407-67876426 Msa1071360:intron 60.0%
TCAAGACCTGGTGTCCAGGG+AGG - chr7_2:67877436-67877455 Msa1071360:intron 60.0%
CAAGACCTGGTGTCCAGGGA+GGG - chr7_2:67877437-67877456 Msa1071360:intron 60.0%
TTGTTCCCTCCCTGGACACC+AGG + chr7_2:67877445-67877464 None:intergenic 60.0%
! GTTGGGGGCGCATCAGATGG+AGG - chr7_2:67877511-67877530 Msa1071360:CDS 65.0%
! GTTGGGGGCGCATCAGATGG+AGG - chr7_2:67877511-67877530 Msa1071360:CDS 65.0%
CGGGCGAAGGGGGTTGCGAG+AGG + chr7_2:67876397-67876416 None:intergenic 75.0%
CGGGCGAAGGGGGTTGCGAG+AGG + chr7_2:67876397-67876416 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 67875608 67877830 67875608 ID=Msa1071360;Name=Msa1071360
chr7_2 mRNA 67875608 67877830 67875608 ID=Msa1071360-mRNA-1;Parent=Msa1071360;Name=Msa1071360-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.5|1|1|1|2|248|252
chr7_2 exon 67875608 67876284 67875608 ID=Msa1071360-mRNA-1:exon:14742;Parent=Msa1071360-mRNA-1
chr7_2 exon 67877501 67877830 67877501 ID=Msa1071360-mRNA-1:exon:14741;Parent=Msa1071360-mRNA-1
chr7_2 CDS 67877501 67877830 67877501 ID=Msa1071360-mRNA-1:cds;Parent=Msa1071360-mRNA-1
chr7_2 CDS 67875856 67876284 67875856 ID=Msa1071360-mRNA-1:cds;Parent=Msa1071360-mRNA-1
chr7_2 three_prime_UTR 67875608 67875855 67875608 ID=Msa1071360-mRNA-1:three_prime_utr;Parent=Msa1071360-mRNA-1
Gene Sequence

>Msa1071360

ATGCTAATAGTGTTATGTGTAATTGAATTTCTATTCTTGTTAGCAGTTGTTTATGAGGATGATTTTTTTTGTTTGCAGAGTTTGAGATCAAGGGGTATTAGGTTTCCTGGTCGTGATAATGAAAGCTTGGCTCCAATTTTCACTCCTCCTCGATCAGCTACTGTGCCAGAGCCACCTCATGTGGATGATATTCCGCGTCAATTTCAGCAGGATGTTCCTGTGCAGGGTTATACAGAAGAACAGACGAAGGAAGCCTTTGATGTTGCGAGAAATAGTATTGAGCTTCTTTCTACTGTGTTATCATCTTCACCGCAACAGGATGTTTTGCAGGATGATTTGACCGCCACACTTGTACAGCAGTGTCGTCGCTCTCAAATTACTGTCCAGCGTATTGTTGAAACTGCTGGGGATAATGAAGCAATTCTTTTTGAGGCCCTGAATGTTAATGATGAAATTCTAAAGGTTCTTACCAAGTATGAGGAGTTGAAACCACCTCCAGTTGCTCCACTTCAACCTGAACCAGCTATGATACCTGTTGCTGTCGAGCCAGATGAGTCACCTCGGCATCTTGATGATGCTAAAGAGGACTCCTTGATTAGAAAGCCAGCTGGATCAAGACCTGGTGTCCAGGGAGGGAACAATGATGACATGATGGATGATCTTGATGAAATGATTTTTGGGAGTAAAGTTGGGGGCGCATCAGATGGAGGACATGACACAAAAAAACAATCTTCTAAAGATGATCTCATCTCCTTCTAA
Protein sequence

>Msa1071360

MLIVLCVIEFLFLLAVVYEDDFFCLQSLRSRGIRFPGRDNESLAPIFTPPRSATVPEPPHVDDIPRQFQQDVPVQGYTEEQTKEAFDVARNSIELLSTVLSSSPQQDVLQDDLTATLVQQCRRSQITVQRIVETAGDNEAILFEALNVNDEILKVLTKYEELKPPPVAPLQPEPAMIPVAVEPDESPRHLDDAKEDSLIRKPAGSRPGVQGGNNDDMMDDLDEMIFGSKVGGASDGGHDTKKQSSKDDLISF*