Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084270 | XP_039687607.1 | 98.263 | 403 | 7 | 0 | 1 | 403 | 1 | 403 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084270 | sp|D2K8N5|TAP46_NICBE | 71.782 | 404 | 112 | 2 | 1 | 403 | 1 | 403 | 0.0 | 596 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084270 | G7J7F3 | 98.020 | 404 | 7 | 1 | 1 | 403 | 1 | 404 | 0.0 | 816 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016510 | Msa1084270 | 0.808171 | 3.531061e-50 | -8.615850e-47 |
| Msa0096700 | Msa1084270 | 0.812025 | 5.217793e-51 | -8.615850e-47 |
| Msa0098990 | Msa1084270 | 0.812211 | 4.751581e-51 | -8.615850e-47 |
| Msa0620330 | Msa1084270 | 0.812555 | 3.997040e-51 | -8.615850e-47 |
| Msa0676280 | Msa1084270 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
| Msa0726080 | Msa1084270 | 0.818917 | 1.526465e-52 | -8.615850e-47 |
| Msa0760990 | Msa1084270 | -0.809131 | 2.202336e-50 | -8.615850e-47 |
| Msa0376600 | Msa1084270 | 0.897709 | 1.080303e-76 | -8.615850e-47 |
| Msa1071360 | Msa1084270 | 0.813352 | 2.673062e-51 | -8.615850e-47 |
| Msa1084270 | Msa1178580 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa1084270 | Msa1208380 | 0.801783 | 7.650753e-49 | -8.615850e-47 |
| Msa1084270 | Msa1233850 | 0.825849 | 3.746254e-54 | -8.615850e-47 |
| Msa1084270 | Msa1276150 | 0.803367 | 3.605596e-49 | -8.615850e-47 |
| Msa1084270 | Msa1315750 | 0.828933 | 6.824796e-55 | -8.615850e-47 |
| Msa1084270 | Msa1316440 | 0.802644 | 5.086566e-49 | -8.615850e-47 |
| Msa1084270 | Msa1442790 | 0.812078 | 5.081080e-51 | -8.615850e-47 |
| Msa0284450 | Msa1084270 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0516360 | Msa1084270 | 0.848446 | 6.098850e-60 | -8.615850e-47 |
| Msa0548930 | Msa1084270 | 0.802380 | 5.766944e-49 | -8.615850e-47 |
| Msa0566350 | Msa1084270 | 0.804600 | 1.998216e-49 | -8.615850e-47 |
| Msa0846230 | Msa1084270 | 0.825337 | 4.952063e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084270 | MtrunA17_Chr3g0126951 | 98.020 | 404 | 7 | 1 | 1 | 403 | 1 | 404 | 0.0 | 816 |
| Msa1084270 | MtrunA17_Chr1g0171331 | 93.675 | 332 | 15 | 1 | 72 | 403 | 19 | 344 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084270 | AT5G53000.1 | 70.370 | 405 | 118 | 1 | 1 | 403 | 1 | 405 | 0.0 | 580 |
Find 130 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACACCAACCACTGATATT+TGG | 0.154577 | 7_2:-84531500 | Msa1084270:CDS |
| TAAGATTCTAACTCCTCTTT+TGG | 0.196712 | 7_2:+84532914 | None:intergenic |
| AAGAAAACATGACACCTTTC+TGG | 0.241137 | 7_2:+84532853 | None:intergenic |
| TTCCGGTGAAAGATAATAAT+TGG | 0.248157 | 7_2:+84534370 | None:intergenic |
| TGTTCAGGCATTTGATCTTC+TGG | 0.248796 | 7_2:-84532112 | Msa1084270:intron |
| AGGGGTAAGCTTCGAATTTC+CGG | 0.250990 | 7_2:+84530962 | None:intergenic |
| GATTCTGTTGGTAGTGTTTC+CGG | 0.262024 | 7_2:+84534353 | None:intergenic |
| AATGCGAAAACATGATTAAT+AGG | 0.270151 | 7_2:-84534091 | Msa1084270:CDS |
| CCACTCCTGGTTGAGCTATA+TGG | 0.287124 | 7_2:+84530684 | None:intergenic |
| CTCTGATCAGCAACAGCTTT+TGG | 0.287618 | 7_2:+84532878 | None:intergenic |
| GAGCTAGAGCTTTGGATGAT+TGG | 0.301964 | 7_2:-84531007 | Msa1084270:CDS |
| TCTTCCTCTCCTGCCTCAAC+AGG | 0.311176 | 7_2:+84532570 | None:intergenic |
| GGTTGTGCTGATATCCTCTT+TGG | 0.321034 | 7_2:+84534043 | None:intergenic |
| TTGGAATACTAGCATATCTT+TGG | 0.334027 | 7_2:-84532220 | Msa1084270:CDS |
| AACACCAACCACTGATATTT+GGG | 0.339739 | 7_2:-84531499 | Msa1084270:CDS |
| ATTGGCTTCTTCAATGAATC+TGG | 0.346117 | 7_2:+84531106 | None:intergenic |
| ATCATTGTGCCAAGATGAAT+TGG | 0.351143 | 7_2:+84531088 | None:intergenic |
| CTGCCTCAACAGGGGTGGAC+AGG | 0.380810 | 7_2:+84532580 | None:intergenic |
| GATGGAGGACATGCCGTTAC+CGG | 0.383115 | 7_2:-84534288 | Msa1084270:CDS |
| TACCTTCGCTCAAGATGTTC+TGG | 0.387841 | 7_2:-84531558 | Msa1084270:CDS |
| CATATCTTTGGCAATCTGTA+AGG | 0.394600 | 7_2:-84532208 | Msa1084270:intron |
| ATTCATCTTGGCACAATGAT+AGG | 0.398345 | 7_2:-84531085 | Msa1084270:CDS |
| GGCAGGAGAGGAAGAACTAT+TGG | 0.402541 | 7_2:-84532562 | Msa1084270:CDS |
| CTTCCATTCACAAGACTTTG+TGG | 0.409118 | 7_2:+84531476 | None:intergenic |
| GAGAGCAAGAATGGCAGCTC+AGG | 0.410453 | 7_2:-84531441 | Msa1084270:CDS |
| CCATGTTTAGGATGGGGATC+AGG | 0.419549 | 7_2:-84531690 | Msa1084270:intron |
| ATGTAGTCAGATGAATTTCC+AGG | 0.421026 | 7_2:+84530812 | None:intergenic |
| GATAAATATGTACCTATGAC+TGG | 0.430417 | 7_2:+84531409 | None:intergenic |
| ATATGGCAAATTAAACAAAC+TGG | 0.437156 | 7_2:+84530701 | None:intergenic |
| CTGTCCACCCCTGTTGAGGC+AGG | 0.437775 | 7_2:-84532579 | Msa1084270:CDS |
| AGGTCTTCCAACCCAGTCAT+AGG | 0.441903 | 7_2:-84531421 | Msa1084270:intron |
| TACAAATGAGAGAGCAAGAA+TGG | 0.443576 | 7_2:-84531450 | Msa1084270:CDS |
| TTGAAGAAGCCAATTCATCT+TGG | 0.455058 | 7_2:-84531097 | Msa1084270:CDS |
| CACGCCACCGCCACTGAGTC+CGG | 0.455804 | 7_2:-84534239 | Msa1084270:CDS |
| GCCTGGGAAGCCTTTAGAAT+CGG | 0.455958 | 7_2:+84533122 | None:intergenic |
| TCATCCTCCTCCTCTTCACC+TGG | 0.457933 | 7_2:+84531053 | None:intergenic |
| TGCCCTGTCCACCCCTGTTG+AGG | 0.460057 | 7_2:-84532583 | Msa1084270:CDS |
| GGAAGCAGGACTAAAAGAAA+TGG | 0.466493 | 7_2:-84531159 | Msa1084270:CDS |
| GATGATAATCCGCGGGGTGC+CGG | 0.475557 | 7_2:-84530981 | Msa1084270:CDS |
| TTTAAAGGAAATCCCACTCC+TGG | 0.477352 | 7_2:+84530671 | None:intergenic |
| TGCTCATTATTCTTCAACCT+GGG | 0.489433 | 7_2:+84530916 | None:intergenic |
| CTCTCCTGCCTCAACAGGGG+TGG | 0.490362 | 7_2:+84532575 | None:intergenic |
| CAAAAGCTGTTGCTGATCAG+AGG | 0.494147 | 7_2:-84532877 | Msa1084270:CDS |
| GTCAACTCAGCAAGATAATA+CGG | 0.494833 | 7_2:+84533173 | None:intergenic |
| TCTGGAAATGATTAAGAAAG+AGG | 0.495866 | 7_2:-84532094 | Msa1084270:CDS |
| TGACGGAGAAGAAGAAAGAG+AGG | 0.495976 | 7_2:-84532535 | Msa1084270:intron |
| TTCCAATTATTATCTTTCAC+CGG | 0.497028 | 7_2:-84534372 | Msa1084270:five_prime_UTR |
| TGCCTCAACAGGGGTGGACA+GGG | 0.499117 | 7_2:+84532581 | None:intergenic |
| TAATTGAATCTATTCTTCCC+AGG | 0.501131 | 7_2:-84530933 | Msa1084270:three_prime_UTR |
| TCCGATGGGTGAGATGAAGA+TGG | 0.501968 | 7_2:-84534306 | Msa1084270:exon |
| ACCGATTCTAAAGGCTTCCC+AGG | 0.508228 | 7_2:-84533123 | Msa1084270:CDS |
| TGAAGATGACGATGCTGCAC+AGG | 0.511553 | 7_2:-84531033 | Msa1084270:CDS |
| TGTTCAGGAGCTTGTCAAGA+AGG | 0.513400 | 7_2:-84534132 | Msa1084270:intron |
| GGGCCACAAAGTCTTGTGAA+TGG | 0.518210 | 7_2:-84531479 | Msa1084270:CDS |
| GAAAACATGATTAATAGGCT+TGG | 0.519278 | 7_2:-84534086 | Msa1084270:CDS |
| GGAGATGCTTTCTGCTGTAA+AGG | 0.520685 | 7_2:-84532070 | Msa1084270:CDS |
| TTGCTCATTATTCTTCAACC+TGG | 0.521555 | 7_2:+84530915 | None:intergenic |
| AAATGGAAATTATGAATACA+TGG | 0.530525 | 7_2:-84531142 | Msa1084270:CDS |
| TGCTGATCAGAGGGCCAGAA+AGG | 0.530837 | 7_2:-84532867 | Msa1084270:intron |
| CTTCCTCTCCTGCCTCAACA+GGG | 0.530933 | 7_2:+84532571 | None:intergenic |
| AATTCGAAGCTTACCCCTTG+CGG | 0.531093 | 7_2:-84530957 | Msa1084270:CDS |
| AGAAAATAGCACATGATGAC+AGG | 0.531695 | 7_2:-84533148 | Msa1084270:CDS |
| TGCTTCCTCAATGCTCATAG+TGG | 0.531761 | 7_2:+84531175 | None:intergenic |
| ACAGGATAGAGCTAGAGCTT+TGG | 0.535946 | 7_2:-84531015 | Msa1084270:CDS |
| TAGAGCTTTGGATGATTGGA+AGG | 0.539728 | 7_2:-84531003 | Msa1084270:CDS |
| GTTCAGGAGCTTGTCAAGAA+GGG | 0.541089 | 7_2:-84534131 | Msa1084270:intron |
| GAAGTTTAAGCCAGGTGAAG+AGG | 0.541846 | 7_2:-84531063 | Msa1084270:CDS |
| CGTCTGAGATTTGATTCTGT+TGG | 0.545001 | 7_2:+84534341 | None:intergenic |
| GAAACGAAAGCGTACTTGGT+CGG | 0.545373 | 7_2:+84534214 | None:intergenic |
| TAAGCCAGGTGAAGAGGAGG+AGG | 0.545443 | 7_2:-84531057 | Msa1084270:CDS |
| GGCACCGGACTCAGTGGCGG+TGG | 0.546659 | 7_2:+84534235 | None:intergenic |
| CGGACTCAGTGGCGGTGGCG+TGG | 0.550530 | 7_2:+84534240 | None:intergenic |
| ATATGTACCTATGACTGGGT+TGG | 0.554490 | 7_2:+84531414 | None:intergenic |
| GCGAAGGTAGCACATGTGAT+TGG | 0.558292 | 7_2:+84531572 | None:intergenic |
| CACCCCTGTTGAGGCAGGAG+AGG | 0.559655 | 7_2:-84532574 | Msa1084270:CDS |
| ATAGATTCAATTAGCCGCAA+GGG | 0.564088 | 7_2:+84530943 | None:intergenic |
| CTTGCTTGTTCAAACAGCGC+CGG | 0.565472 | 7_2:+84534269 | None:intergenic |
| GCTTCCTCAATGCTCATAGT+GGG | 0.565665 | 7_2:+84531176 | None:intergenic |
| AAAGCGTACTTGGTCGGCAC+CGG | 0.566041 | 7_2:+84534220 | None:intergenic |
| GATGGAGCTGGTCCCAAAAG+AGG | 0.566346 | 7_2:-84532927 | Msa1084270:CDS |
| TCCATCTTCATCTCACCCAT+CGG | 0.567407 | 7_2:+84534305 | None:intergenic |
| TTGGAAGGATGATAATCCGC+GGG | 0.569064 | 7_2:-84530988 | Msa1084270:CDS |
| CCATATAGCTCAACCAGGAG+TGG | 0.569742 | 7_2:-84530684 | Msa1084270:three_prime_UTR |
| TGTTCAAACAGCGCCGGTAA+CGG | 0.569938 | 7_2:+84534275 | None:intergenic |
| CTCTGCTAATGAAACCAAAG+AGG | 0.570061 | 7_2:-84534057 | Msa1084270:CDS |
| GTAAAACATAGAATAAAAGA+AGG | 0.570626 | 7_2:+84530746 | None:intergenic |
| TTCCAGAACATCTTGAGCGA+AGG | 0.571431 | 7_2:+84531556 | None:intergenic |
| GCACATGTGATTGGTGGAGA+TGG | 0.572371 | 7_2:+84531581 | None:intergenic |
| CATATAGCTCAACCAGGAGT+GGG | 0.572704 | 7_2:-84530683 | Msa1084270:three_prime_UTR |
| TGACAGGATACCGATTCTAA+AGG | 0.573766 | 7_2:-84533132 | Msa1084270:CDS |
| AGTTAGAATCTTATATGCAA+GGG | 0.574858 | 7_2:-84532904 | Msa1084270:CDS |
| AAGGTAGCACATGTGATTGG+TGG | 0.577338 | 7_2:+84531575 | None:intergenic |
| CAAAATCTTTAACACAGACT+AGG | 0.577669 | 7_2:+84530839 | None:intergenic |
| GAGTTAGAATCTTATATGCA+AGG | 0.580289 | 7_2:-84532905 | Msa1084270:CDS |
| GTTAGAAATAAACGAGCGAA+AGG | 0.582445 | 7_2:-84532634 | Msa1084270:CDS |
| CGGCGCTGTTTGAACAAGCA+AGG | 0.583327 | 7_2:-84534268 | Msa1084270:CDS |
| GTTTAAGCCAGGTGAAGAGG+AGG | 0.583570 | 7_2:-84531060 | Msa1084270:CDS |
| GGCTTCCCAGGCAAAACTGA+AGG | 0.587652 | 7_2:-84533111 | Msa1084270:intron |
| TGTAAAGGATAGACAATCCA+AGG | 0.589440 | 7_2:-84532055 | Msa1084270:intron |
| TTTGTGTTCGTGTGCTTGCG+AGG | 0.589889 | 7_2:+84531520 | None:intergenic |
| AAAAGCTGTTGCTGATCAGA+GGG | 0.591137 | 7_2:-84532876 | Msa1084270:CDS |
| GGAAATGATTAAGAAAGAGG+AGG | 0.591992 | 7_2:-84532091 | Msa1084270:CDS |
| AACCGATCTCAAGTACATCC+TGG | 0.592669 | 7_2:-84534024 | Msa1084270:intron |
| GTGGCCCAAATATCAGTGGT+TGG | 0.592707 | 7_2:+84531495 | None:intergenic |
| ACTATGAGCATTGAGGAAGC+AGG | 0.594997 | 7_2:-84531173 | Msa1084270:CDS |
| TTCCTCTCCTGCCTCAACAG+GGG | 0.599086 | 7_2:+84532572 | None:intergenic |
| TACCAGGATGTACTTGAGAT+CGG | 0.603064 | 7_2:+84534022 | None:intergenic |
| AATGATAGGAAGTTTAAGCC+AGG | 0.610210 | 7_2:-84531071 | Msa1084270:CDS |
| AAATAAACGAGCGAAAGGAA+CGG | 0.614011 | 7_2:-84532629 | Msa1084270:CDS |
| AATAGATTCAATTAGCCGCA+AGG | 0.614970 | 7_2:+84530942 | None:intergenic |
| GAATAAAAGAAGGTGAGATG+AGG | 0.616605 | 7_2:+84530756 | None:intergenic |
| GAAGAACTATTGGAAGATGA+CGG | 0.618639 | 7_2:-84532552 | Msa1084270:CDS |
| ATTTGCCATATAGCTCAACC+AGG | 0.621910 | 7_2:-84530689 | Msa1084270:three_prime_UTR |
| ATAAATATGTACCTATGACT+GGG | 0.627631 | 7_2:+84531410 | None:intergenic |
| TTCGCTCAAGATGTTCTGGA+AGG | 0.633258 | 7_2:-84531554 | Msa1084270:CDS |
| GTCGGCACCGGACTCAGTGG+CGG | 0.633971 | 7_2:+84534232 | None:intergenic |
| AGGTTGAAGAATAATGAGCA+AGG | 0.634107 | 7_2:-84530913 | Msa1084270:three_prime_UTR |
| ACGAGCGAAAGGAACGGCGT+GGG | 0.637909 | 7_2:-84532623 | Msa1084270:CDS |
| GTTAGAATCTTATATGCAAG+GGG | 0.638453 | 7_2:-84532903 | Msa1084270:CDS |
| CTTTGTGGCCCAAATATCAG+TGG | 0.638531 | 7_2:+84531491 | None:intergenic |
| GGTTGAAGAATAATGAGCAA+GGG | 0.648208 | 7_2:-84530912 | Msa1084270:three_prime_UTR |
| GATGCCCACTATGAGCATTG+AGG | 0.648707 | 7_2:-84531180 | Msa1084270:CDS |
| TTGGTCGGCACCGGACTCAG+TGG | 0.649187 | 7_2:+84534229 | None:intergenic |
| TTCGAATTTCCGGCACCCCG+CGG | 0.649460 | 7_2:+84530972 | None:intergenic |
| TAGATTCAATTAGCCGCAAG+GGG | 0.654034 | 7_2:+84530944 | None:intergenic |
| AACGAGCGAAAGGAACGGCG+TGG | 0.663839 | 7_2:-84532624 | Msa1084270:CDS |
| ATTGGAAGGATGATAATCCG+CGG | 0.675321 | 7_2:-84530989 | Msa1084270:CDS |
| GCTTGTCAAGAAGGGATGCG+AGG | 0.685734 | 7_2:-84534123 | Msa1084270:CDS |
| GATGGGTGAGATGAAGATGG+AGG | 0.688122 | 7_2:-84534303 | Msa1084270:CDS |
| TGGAAGGATGATAATCCGCG+GGG | 0.769686 | 7_2:-84530987 | Msa1084270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAAATCTAGTTATTATA+AGG | - | chr7_2:84531191-84531210 | Msa1084270:intron | 15.0% |
| !! | ATAACAAAAAATTGGTAAAT+GGG | + | chr7_2:84531831-84531850 | None:intergenic | 15.0% |
| !! | TAATATTGAAGAAATTAACA+AGG | + | chr7_2:84532018-84532037 | None:intergenic | 15.0% |
| !!! | TACTGAAAAACATTTTTTTT+AGG | - | chr7_2:84532066-84532085 | Msa1084270:CDS | 15.0% |
| !! | AAATATAAGTTTAAACAAAG+TGG | + | chr7_2:84532880-84532899 | None:intergenic | 15.0% |
| !! | AATCCTAATGTGTATTAATA+TGG | - | chr7_2:84531695-84531714 | Msa1084270:intron | 20.0% |
| !! | ATCCTAATGTGTATTAATAT+GGG | - | chr7_2:84531696-84531715 | Msa1084270:intron | 20.0% |
| !! | GATAACAAAAAATTGGTAAA+TGG | + | chr7_2:84531832-84531851 | None:intergenic | 20.0% |
| !! | TTTCATAACAAGTGAATAAT+GGG | + | chr7_2:84532277-84532296 | None:intergenic | 20.0% |
| !!! | TTTTCATAACAAGTGAATAA+TGG | + | chr7_2:84532278-84532297 | None:intergenic | 20.0% |
| !! | TTATATTTCGATTATTCTCA+TGG | - | chr7_2:84532892-84532911 | Msa1084270:CDS | 20.0% |
| !!! | GTTTTATATTGCCATAATTA+TGG | - | chr7_2:84533077-84533096 | Msa1084270:intron | 20.0% |
| !! | AATGTGCATTTATTGATAAA+GGG | + | chr7_2:84533655-84533674 | None:intergenic | 20.0% |
| !! | AAATGTGCATTTATTGATAA+AGG | + | chr7_2:84533656-84533675 | None:intergenic | 20.0% |
| !! | AAATGGAAATTATGAATACA+TGG | - | chr7_2:84533896-84533915 | Msa1084270:intron | 20.0% |
| !! | GTAAAACATAGAATAAAAGA+AGG | + | chr7_2:84534295-84534314 | None:intergenic | 20.0% |
| ! | TTCCAATTATTATCTTTCAC+CGG | - | chr7_2:84530666-84530685 | Msa1084270:three_prime_UTR | 25.0% |
| ! | CAGAAACATGAAAACAAATA+AGG | + | chr7_2:84530857-84530876 | None:intergenic | 25.0% |
| ! | AATGCGAAAACATGATTAAT+AGG | - | chr7_2:84530947-84530966 | Msa1084270:exon | 25.0% |
| ! | TTCTACTAGATTTCTATGTT+TGG | + | chr7_2:84531467-84531486 | None:intergenic | 25.0% |
| ! | AATAAAACACGATTACACAA+TGG | - | chr7_2:84531506-84531525 | Msa1084270:CDS | 25.0% |
| ! | ATAAAACACGATTACACAAT+GGG | - | chr7_2:84531507-84531526 | Msa1084270:CDS | 25.0% |
| ! | TTCCCATATTAATACACATT+AGG | + | chr7_2:84531701-84531720 | None:intergenic | 25.0% |
| ! | CTTCAATATTCTGTACTTAA+AGG | + | chr7_2:84531779-84531798 | None:intergenic | 25.0% |
| ! | AGGGAATGATAACAAAAAAT+TGG | + | chr7_2:84531839-84531858 | None:intergenic | 25.0% |
| ! | TTTCAGTAAGCTTCAATAAA+AGG | + | chr7_2:84532054-84532073 | None:intergenic | 25.0% |
| ! | AGTTAGAATCTTATATGCAA+GGG | - | chr7_2:84532134-84532153 | Msa1084270:intron | 25.0% |
| ! | ACTAAATAAAGTAGCAGTAA+TGG | + | chr7_2:84532552-84532571 | None:intergenic | 25.0% |
| !!! | ATTACTGCTACTTTATTTAG+TGG | - | chr7_2:84532551-84532570 | Msa1084270:CDS | 25.0% |
| !!! | TTACTGCTACTTTATTTAGT+GGG | - | chr7_2:84532552-84532571 | Msa1084270:CDS | 25.0% |
| !!! | TTATTTTTCTTCTCCTTTTC+AGG | - | chr7_2:84532794-84532813 | Msa1084270:intron | 25.0% |
| ! | ATTATGGCAATATAAAACAG+TGG | + | chr7_2:84533075-84533094 | None:intergenic | 25.0% |
| ! | TTATATTGCCATAATTATGG+TGG | - | chr7_2:84533080-84533099 | Msa1084270:intron | 25.0% |
| ! | AATAAAAGTTAAGTTCTACC+AGG | + | chr7_2:84533161-84533180 | None:intergenic | 25.0% |
| !! | CACATTTCACTTGATAATTA+TGG | - | chr7_2:84533195-84533214 | Msa1084270:intron | 25.0% |
| !! | ACTTGATAATTATGGAATAC+CGG | - | chr7_2:84533203-84533222 | Msa1084270:intron | 25.0% |
| ! | ATAAATATGTACCTATGACT+GGG | + | chr7_2:84533631-84533650 | None:intergenic | 25.0% |
| ! | ATGTGCATTTATTGATAAAG+GGG | + | chr7_2:84533654-84533673 | None:intergenic | 25.0% |
| !! | ATTGAACTTCATTTTCTTTC+AGG | + | chr7_2:84533740-84533759 | None:intergenic | 25.0% |
| !!! | TGAGTTGAATATTTTGTTGA+AGG | - | chr7_2:84533836-84533855 | Msa1084270:intron | 25.0% |
| !! | TGTTAAAGATTTTGTATACC+TGG | - | chr7_2:84534208-84534227 | Msa1084270:intron | 25.0% |
| ! | ATATGGCAAATTAAACAAAC+TGG | + | chr7_2:84534340-84534359 | None:intergenic | 25.0% |
| TTCCGGTGAAAGATAATAAT+TGG | + | chr7_2:84530671-84530690 | None:intergenic | 30.0% | |
| ! | ACGTTAATTTTCTTTTCCGA+TGG | - | chr7_2:84530717-84530736 | Msa1084270:three_prime_UTR | 30.0% |
| ! | CGTTAATTTTCTTTTCCGAT+GGG | - | chr7_2:84530718-84530737 | Msa1084270:three_prime_UTR | 30.0% |
| GAAAACATGATTAATAGGCT+TGG | - | chr7_2:84530952-84530971 | Msa1084270:exon | 30.0% | |
| GGAATGAGTATAAAAATCCA+AGG | - | chr7_2:84531241-84531260 | Msa1084270:intron | 30.0% | |
| CTGTGCAATTTATTGTAATG+CGG | - | chr7_2:84531359-84531378 | Msa1084270:intron | 30.0% | |
| TTGTGTTCTTAAGAGATGTT+TGG | - | chr7_2:84531395-84531414 | Msa1084270:intron | 30.0% | |
| TTCATGATTGTGATAGAAAC+TGG | - | chr7_2:84531439-84531458 | Msa1084270:CDS | 30.0% | |
| ! | TAAATTTTTCCAGTCTCACT+CGG | + | chr7_2:84531578-84531597 | None:intergenic | 30.0% |
| ACTAGTTGTTGCACATATTT+AGG | + | chr7_2:84531615-84531634 | None:intergenic | 30.0% | |
| ! | TGTGCATATAGTGTTGAATT+GGG | + | chr7_2:84531993-84532012 | None:intergenic | 30.0% |
| ! | TTGTGCATATAGTGTTGAAT+TGG | + | chr7_2:84531994-84532013 | None:intergenic | 30.0% |
| ! | GGAATTTATCTCATTTTGTG+AGG | - | chr7_2:84532087-84532106 | Msa1084270:CDS | 30.0% |
| ! | AAGATTCTAACTCCTCTTTT+GGG | + | chr7_2:84532126-84532145 | None:intergenic | 30.0% |
| ! | TAAGATTCTAACTCCTCTTT+TGG | + | chr7_2:84532127-84532146 | None:intergenic | 30.0% |
| GAGTTAGAATCTTATATGCA+AGG | - | chr7_2:84532133-84532152 | Msa1084270:intron | 30.0% | |
| GTTAGAATCTTATATGCAAG+GGG | - | chr7_2:84532135-84532154 | Msa1084270:intron | 30.0% | |
| AAGCTAGTCCAATAATATGT+AGG | + | chr7_2:84532680-84532699 | None:intergenic | 30.0% | |
| ! | CTAGCTTGTGATTTATGAAA+TGG | - | chr7_2:84532693-84532712 | Msa1084270:intron | 30.0% |
| GGAGAAGAAAAATAAGTGAA+TGG | + | chr7_2:84532789-84532808 | None:intergenic | 30.0% | |
| TTGGAATACTAGCATATCTT+TGG | - | chr7_2:84532818-84532837 | Msa1084270:intron | 30.0% | |
| TCTGGAAATGATTAAGAAAG+AGG | - | chr7_2:84532944-84532963 | Msa1084270:CDS | 30.0% | |
| ! | TACTAAGCATTTTACTACCT+TGG | + | chr7_2:84533003-84533022 | None:intergenic | 30.0% |
| AAAGATCTCAACCACAATAA+TGG | + | chr7_2:84533044-84533063 | None:intergenic | 30.0% | |
| AAAGATCTCCACCATAATTA+TGG | + | chr7_2:84533091-84533110 | None:intergenic | 30.0% | |
| ! | AATTATGGTGGAGATCTTTA+TGG | - | chr7_2:84533092-84533111 | Msa1084270:intron | 30.0% |
| ! | ATTATGGTGGAGATCTTTAT+GGG | - | chr7_2:84533093-84533112 | Msa1084270:intron | 30.0% |
| CTTAAAGAACTGTTATAACC+TGG | - | chr7_2:84533140-84533159 | Msa1084270:CDS | 30.0% | |
| ! | CTTGATAATTATGGAATACC+GGG | - | chr7_2:84533204-84533223 | Msa1084270:intron | 30.0% |
| !! | TTCTTCTTTAAAGCAGAACA+TGG | + | chr7_2:84533265-84533284 | None:intergenic | 30.0% |
| !! | TGTTCTGCTTTAAAGAAGAA+TGG | - | chr7_2:84533265-84533284 | Msa1084270:intron | 30.0% |
| !! | GTTCTGCTTTAAAGAAGAAT+GGG | - | chr7_2:84533266-84533285 | Msa1084270:intron | 30.0% |
| !!! | GGGAAATTGTTTTTTTTCTG+CGG | - | chr7_2:84533286-84533305 | Msa1084270:intron | 30.0% |
| !!! | GGAAATTGTTTTTTTTCTGC+GGG | - | chr7_2:84533287-84533306 | Msa1084270:intron | 30.0% |
| ! | CTTGTAATTTTGCCATGTTT+AGG | - | chr7_2:84533336-84533355 | Msa1084270:intron | 30.0% |
| ! | TAATTTTGCCATGTTTAGGA+TGG | - | chr7_2:84533340-84533359 | Msa1084270:intron | 30.0% |
| !! | AATTTTGCCATGTTTAGGAT+GGG | - | chr7_2:84533341-84533360 | Msa1084270:intron | 30.0% |
| !! | GGAGTTTTCTAAGGATATTA+TGG | - | chr7_2:84533369-84533388 | Msa1084270:intron | 30.0% |
| GATAAATATGTACCTATGAC+TGG | + | chr7_2:84533632-84533651 | None:intergenic | 30.0% | |
| AATGCACATTTCTTAGCTAA+TGG | - | chr7_2:84533665-84533684 | Msa1084270:intron | 30.0% | |
| !! | TAATGGAAAGCTTTGGAATA+GGG | - | chr7_2:84533682-84533701 | Msa1084270:intron | 30.0% |
| TTAGAACAACAAAACTGCAA+GGG | + | chr7_2:84533764-84533783 | None:intergenic | 30.0% | |
| TAATTGAATCTATTCTTCCC+AGG | - | chr7_2:84534105-84534124 | Msa1084270:CDS | 30.0% | |
| CAAAATCTTTAACACAGACT+AGG | + | chr7_2:84534202-84534221 | None:intergenic | 30.0% | |
| ! | CTATGTTTTACATCTTCACA+TGG | - | chr7_2:84534304-84534323 | Msa1084270:CDS | 30.0% |
| !! | GAGTTGTGTGTAATTTGTTC+AGG | - | chr7_2:84530891-84530910 | Msa1084270:three_prime_UTR | 35.0% |
| AATCAATCAATCGAAAAGCG+TGG | + | chr7_2:84531065-84531084 | None:intergenic | 35.0% | |
| ! | AATTTTACATGCACCGAAGA+TGG | + | chr7_2:84531275-84531294 | None:intergenic | 35.0% |
| CTATCACAATCATGAACCAT+TGG | + | chr7_2:84531435-84531454 | None:intergenic | 35.0% | |
| TGCAAGCATGAATGATGTTT+GGG | + | chr7_2:84531535-84531554 | None:intergenic | 35.0% | |
| TTGCAAGCATGAATGATGTT+TGG | + | chr7_2:84531536-84531555 | None:intergenic | 35.0% | |
| GTGTATTAATATGGGAAAGC+TGG | - | chr7_2:84531704-84531723 | Msa1084270:intron | 35.0% | |
| TAAAGGTCACATGGGAATAT+GGG | + | chr7_2:84531762-84531781 | None:intergenic | 35.0% | |
| TTAAAGGTCACATGGGAATA+TGG | + | chr7_2:84531763-84531782 | None:intergenic | 35.0% | |
| TCTGTACTTAAAGGTCACAT+GGG | + | chr7_2:84531770-84531789 | None:intergenic | 35.0% | |
| TTCTGTACTTAAAGGTCACA+TGG | + | chr7_2:84531771-84531790 | None:intergenic | 35.0% | |
| GTCAACTCAGCAAGATAATA+CGG | + | chr7_2:84531868-84531887 | None:intergenic | 35.0% | |
| !!! | GTCATCATGTGCTATTTTCT+CGG | + | chr7_2:84531890-84531909 | None:intergenic | 35.0% |
| AGAAAATAGCACATGATGAC+AGG | - | chr7_2:84531890-84531909 | Msa1084270:intron | 35.0% | |
| ! | ATAGTGTTGAATTGGGTGTT+GGG | + | chr7_2:84531986-84532005 | None:intergenic | 35.0% |
| ! | TATAGTGTTGAATTGGGTGT+TGG | + | chr7_2:84531987-84532006 | None:intergenic | 35.0% |
| AAGAAAACATGACACCTTTC+TGG | + | chr7_2:84532188-84532207 | None:intergenic | 35.0% | |
| GTTAGAAATAAACGAGCGAA+AGG | - | chr7_2:84532404-84532423 | Msa1084270:intron | 35.0% | |
| AAATAAACGAGCGAAAGGAA+CGG | - | chr7_2:84532409-84532428 | Msa1084270:intron | 35.0% | |
| GAAGAACTATTGGAAGATGA+CGG | - | chr7_2:84532486-84532505 | Msa1084270:intron | 35.0% | |
| !! | AAAACACATTTTCAGGGAAG+CGG | + | chr7_2:84532594-84532613 | None:intergenic | 35.0% |
| ! | CAGGCAAAAACACATTTTCA+GGG | + | chr7_2:84532600-84532619 | None:intergenic | 35.0% |
| TGGATTTATCGACCATTAGA+TGG | - | chr7_2:84532621-84532640 | Msa1084270:CDS | 35.0% | |
| GGATTTATCGACCATTAGAT+GGG | - | chr7_2:84532622-84532641 | Msa1084270:CDS | 35.0% | |
| !! | CTACTTTTAAGCCCATCTAA+TGG | + | chr7_2:84532636-84532655 | None:intergenic | 35.0% |
| ! | CATTAGATGGGCTTAAAAGT+AGG | - | chr7_2:84532634-84532653 | Msa1084270:CDS | 35.0% |
| ATAATATGTAGGACTGCTGT+AGG | + | chr7_2:84532669-84532688 | None:intergenic | 35.0% | |
| ACAGCAGTCCTACATATTAT+TGG | - | chr7_2:84532669-84532688 | Msa1084270:CDS | 35.0% | |
| ! | GTGATTTATGAAATGGACTC+TGG | - | chr7_2:84532700-84532719 | Msa1084270:intron | 35.0% |
| CATATCTTTGGCAATCTGTA+AGG | - | chr7_2:84532830-84532849 | Msa1084270:intron | 35.0% | |
| ATGGTTGTCTTGAAATGTTC+AGG | - | chr7_2:84532911-84532930 | Msa1084270:CDS | 35.0% | |
| GGAAATGATTAAGAAAGAGG+AGG | - | chr7_2:84532947-84532966 | Msa1084270:CDS | 35.0% | |
| TGTAAAGGATAGACAATCCA+AGG | - | chr7_2:84532983-84533002 | Msa1084270:intron | 35.0% | |
| ACAATAATGGTACTTCGGTA+AGG | + | chr7_2:84533031-84533050 | None:intergenic | 35.0% | |
| ! | TTACCGAAGTACCATTATTG+TGG | - | chr7_2:84533030-84533049 | Msa1084270:intron | 35.0% |
| CAACCACAATAATGGTACTT+CGG | + | chr7_2:84533036-84533055 | None:intergenic | 35.0% | |
| !! | ATTTTGCCATGTTTAGGATG+GGG | - | chr7_2:84533342-84533361 | Msa1084270:intron | 35.0% |
| AAACACCAACCACTGATATT+TGG | - | chr7_2:84533538-84533557 | Msa1084270:intron | 35.0% | |
| AACACCAACCACTGATATTT+GGG | - | chr7_2:84533539-84533558 | Msa1084270:intron | 35.0% | |
| TACAAATGAGAGAGCAAGAA+TGG | - | chr7_2:84533588-84533607 | Msa1084270:intron | 35.0% | |
| TCTTAGCTAATGGAAAGCTT+TGG | - | chr7_2:84533675-84533694 | Msa1084270:intron | 35.0% | |
| !! | CTAATGGAAAGCTTTGGAAT+AGG | - | chr7_2:84533681-84533700 | Msa1084270:intron | 35.0% |
| ! | TCAGGCATAAAGTCTTTTGA+TGG | + | chr7_2:84533722-84533741 | None:intergenic | 35.0% |
| GTTAGAACAACAAAACTGCA+AGG | + | chr7_2:84533765-84533784 | None:intergenic | 35.0% | |
| !!! | CAGTTTTGTTGTTCTAACCT+AGG | - | chr7_2:84533767-84533786 | Msa1084270:intron | 35.0% |
| TTCTAACCTAGGAATGATAG+AGG | - | chr7_2:84533778-84533797 | Msa1084270:intron | 35.0% | |
| ATTGATCCTCTATCATTCCT+AGG | + | chr7_2:84533787-84533806 | None:intergenic | 35.0% | |
| ! | ATTGGCTTCTTCAATGAATC+TGG | + | chr7_2:84533935-84533954 | None:intergenic | 35.0% |
| TTGAAGAAGCCAATTCATCT+TGG | - | chr7_2:84533941-84533960 | Msa1084270:intron | 35.0% | |
| ATCATTGTGCCAAGATGAAT+TGG | + | chr7_2:84533953-84533972 | None:intergenic | 35.0% | |
| ATTCATCTTGGCACAATGAT+AGG | - | chr7_2:84533953-84533972 | Msa1084270:intron | 35.0% | |
| AATGATAGGAAGTTTAAGCC+AGG | - | chr7_2:84533967-84533986 | Msa1084270:intron | 35.0% | |
| ATAGATTCAATTAGCCGCAA+GGG | + | chr7_2:84534098-84534117 | None:intergenic | 35.0% | |
| AATAGATTCAATTAGCCGCA+AGG | + | chr7_2:84534099-84534118 | None:intergenic | 35.0% | |
| TGCTCATTATTCTTCAACCT+GGG | + | chr7_2:84534125-84534144 | None:intergenic | 35.0% | |
| TTGCTCATTATTCTTCAACC+TGG | + | chr7_2:84534126-84534145 | None:intergenic | 35.0% | |
| AGGTTGAAGAATAATGAGCA+AGG | - | chr7_2:84534125-84534144 | Msa1084270:CDS | 35.0% | |
| GGTTGAAGAATAATGAGCAA+GGG | - | chr7_2:84534126-84534145 | Msa1084270:CDS | 35.0% | |
| ATGTAGTCAGATGAATTTCC+AGG | + | chr7_2:84534229-84534248 | None:intergenic | 35.0% | |
| !!! | ATATTTTTTGAGTGCAGCGT+AGG | - | chr7_2:84534253-84534272 | Msa1084270:CDS | 35.0% |
| !!! | TATTTTTTGAGTGCAGCGTA+GGG | - | chr7_2:84534254-84534273 | Msa1084270:CDS | 35.0% |
| GAATAAAAGAAGGTGAGATG+AGG | + | chr7_2:84534285-84534304 | None:intergenic | 35.0% | |
| !! | GATTCTGTTGGTAGTGTTTC+CGG | + | chr7_2:84530688-84530707 | None:intergenic | 40.0% |
| ! | CGTCTGAGATTTGATTCTGT+TGG | + | chr7_2:84530700-84530719 | None:intergenic | 40.0% |
| ! | AAGAGAAACGAAAGCGTACT+TGG | + | chr7_2:84530831-84530850 | None:intergenic | 40.0% |
| CTCTGCTAATGAAACCAAAG+AGG | - | chr7_2:84530981-84531000 | Msa1084270:CDS | 40.0% | |
| TACCAGGATGTACTTGAGAT+CGG | + | chr7_2:84531019-84531038 | None:intergenic | 40.0% | |
| !! | GAAGCATAAGAAGAAGTACC+AGG | + | chr7_2:84531035-84531054 | None:intergenic | 40.0% |
| TTATTGTAATGCGGTCACTG+TGG | - | chr7_2:84531368-84531387 | Msa1084270:intron | 40.0% | |
| !! | ATCATGAACCATTGGTTCCA+TGG | + | chr7_2:84531427-84531446 | None:intergenic | 40.0% |
| TTAAGTAAACCGAGTGAGAC+TGG | - | chr7_2:84531566-84531585 | Msa1084270:CDS | 40.0% | |
| ATTAATATGGGAAAGCTGGC+TGG | - | chr7_2:84531708-84531727 | Msa1084270:intron | 40.0% | |
| CAAGATAATACGGCATCTGA+GGG | + | chr7_2:84531858-84531877 | None:intergenic | 40.0% | |
| !! | TGACAGGATACCGATTCTAA+AGG | - | chr7_2:84531906-84531925 | Msa1084270:intron | 40.0% |
| ! | TAGTGTTGAATTGGGTGTTG+GGG | + | chr7_2:84531985-84532004 | None:intergenic | 40.0% |
| ! | TATCTCATTTTGTGAGGCGA+TGG | - | chr7_2:84532093-84532112 | Msa1084270:CDS | 40.0% |
| AAAAGCTGTTGCTGATCAGA+GGG | - | chr7_2:84532162-84532181 | Msa1084270:intron | 40.0% | |
| ! | CCAGGCAAAAACACATTTTC+AGG | + | chr7_2:84532601-84532620 | None:intergenic | 40.0% |
| !! | CCTGAAAATGTGTTTTTGCC+TGG | - | chr7_2:84532598-84532617 | Msa1084270:CDS | 40.0% |
| !! | GAAAATGTGTTTTTGCCTGG+TGG | - | chr7_2:84532601-84532620 | Msa1084270:CDS | 40.0% |
| TAATGGTCGATAAATCCACC+AGG | + | chr7_2:84532619-84532638 | None:intergenic | 40.0% | |
| TGGGCTTAAAAGTAGGTTTG+TGG | - | chr7_2:84532641-84532660 | Msa1084270:CDS | 40.0% | |
| GGGCTTAAAAGTAGGTTTGT+GGG | - | chr7_2:84532642-84532661 | Msa1084270:CDS | 40.0% | |
| !! | TTTCTTCTCCTTTTCAGGCT+TGG | - | chr7_2:84532799-84532818 | Msa1084270:intron | 40.0% |
| CTAGTATTCCAAGCCTGAAA+AGG | + | chr7_2:84532810-84532829 | None:intergenic | 40.0% | |
| TGTTCAGGCATTTGATCTTC+TGG | - | chr7_2:84532926-84532945 | Msa1084270:CDS | 40.0% | |
| TAATGGTACTTCGGTAAGGA+AGG | + | chr7_2:84533027-84533046 | None:intergenic | 40.0% | |
| CATCTATATGTCTCAAAGCC+CGG | + | chr7_2:84533225-84533244 | None:intergenic | 40.0% | |
| !!! | ATGCCAAGCTTCTGCTTTTT+TGG | + | chr7_2:84533404-84533423 | None:intergenic | 40.0% |
| CTTCCATTCACAAGACTTTG+TGG | + | chr7_2:84533565-84533584 | None:intergenic | 40.0% | |
| ATATGTACCTATGACTGGGT+TGG | + | chr7_2:84533627-84533646 | None:intergenic | 40.0% | |
| GGAAGCAGGACTAAAAGAAA+TGG | - | chr7_2:84533879-84533898 | Msa1084270:intron | 40.0% | |
| !! | TAGAGCTTTGGATGATTGGA+AGG | - | chr7_2:84534035-84534054 | Msa1084270:CDS | 40.0% |
| ATTGGAAGGATGATAATCCG+CGG | - | chr7_2:84534049-84534068 | Msa1084270:CDS | 40.0% | |
| TAGATTCAATTAGCCGCAAG+GGG | + | chr7_2:84534097-84534116 | None:intergenic | 40.0% | |
| ATTTGCCATATAGCTCAACC+AGG | - | chr7_2:84534349-84534368 | Msa1084270:five_prime_UTR | 40.0% | |
| TTTAAAGGAAATCCCACTCC+TGG | + | chr7_2:84534370-84534389 | None:intergenic | 40.0% | |
| TCCATCTTCATCTCACCCAT+CGG | + | chr7_2:84530736-84530755 | None:intergenic | 45.0% | |
| ! | GAAACGAAAGCGTACTTGGT+CGG | + | chr7_2:84530827-84530846 | None:intergenic | 45.0% |
| TGTTCAGGAGCTTGTCAAGA+AGG | - | chr7_2:84530906-84530925 | Msa1084270:three_prime_UTR | 45.0% | |
| GTTCAGGAGCTTGTCAAGAA+GGG | - | chr7_2:84530907-84530926 | Msa1084270:three_prime_UTR | 45.0% | |
| ! | GGTTGTGCTGATATCCTCTT+TGG | + | chr7_2:84530998-84531017 | None:intergenic | 45.0% |
| AACCGATCTCAAGTACATCC+TGG | - | chr7_2:84531014-84531033 | Msa1084270:CDS | 45.0% | |
| !! | TTGTTTTGCTGATAGCCGCA+CGG | - | chr7_2:84531214-84531233 | Msa1084270:intron | 45.0% |
| AGAAACCGAATGCTGAAGCT+TGG | - | chr7_2:84531309-84531328 | Msa1084270:intron | 45.0% | |
| GAAACCGAATGCTGAAGCTT+GGG | - | chr7_2:84531310-84531329 | Msa1084270:intron | 45.0% | |
| AAACCGAATGCTGAAGCTTG+GGG | - | chr7_2:84531311-84531330 | Msa1084270:intron | 45.0% | |
| ! | GAGATGTTTGGTAGCTTCCA+TGG | - | chr7_2:84531407-84531426 | Msa1084270:intron | 45.0% |
| GCAAGATAATACGGCATCTG+AGG | + | chr7_2:84531859-84531878 | None:intergenic | 45.0% | |
| ! | TCTCACCTTCAGTTTTGCCT+GGG | + | chr7_2:84531935-84531954 | None:intergenic | 45.0% |
| GTGAGAGCTGATCTGTTGAA+AGG | - | chr7_2:84531949-84531968 | Msa1084270:intron | 45.0% | |
| !! | AGTGTTGAATTGGGTGTTGG+GGG | + | chr7_2:84531984-84532003 | None:intergenic | 45.0% |
| ! | CTCTGATCAGCAACAGCTTT+TGG | + | chr7_2:84532163-84532182 | None:intergenic | 45.0% |
| CAAAAGCTGTTGCTGATCAG+AGG | - | chr7_2:84532161-84532180 | Msa1084270:intron | 45.0% | |
| TGACGGAGAAGAAGAAAGAG+AGG | - | chr7_2:84532503-84532522 | Msa1084270:intron | 45.0% | |
| GGAGATGCTTTCTGCTGTAA+AGG | - | chr7_2:84532968-84532987 | Msa1084270:intron | 45.0% | |
| ! | TGGGGATCAGGAGTTTTCTA+AGG | - | chr7_2:84533360-84533379 | Msa1084270:intron | 45.0% |
| GTGCCAAAAAAGCAGAAGCT+TGG | - | chr7_2:84533398-84533417 | Msa1084270:intron | 45.0% | |
| AAGGTAGCACATGTGATTGG+TGG | + | chr7_2:84533466-84533485 | None:intergenic | 45.0% | |
| TACCTTCGCTCAAGATGTTC+TGG | - | chr7_2:84533480-84533499 | Msa1084270:intron | 45.0% | |
| TTCCAGAACATCTTGAGCGA+AGG | + | chr7_2:84533485-84533504 | None:intergenic | 45.0% | |
| ! | TTCGCTCAAGATGTTCTGGA+AGG | - | chr7_2:84533484-84533503 | Msa1084270:intron | 45.0% |
| CTTTGTGGCCCAAATATCAG+TGG | + | chr7_2:84533550-84533569 | None:intergenic | 45.0% | |
| GCTTCCTCAATGCTCATAGT+GGG | + | chr7_2:84533865-84533884 | None:intergenic | 45.0% | |
| TGCTTCCTCAATGCTCATAG+TGG | + | chr7_2:84533866-84533885 | None:intergenic | 45.0% | |
| !! | ACTATGAGCATTGAGGAAGC+AGG | - | chr7_2:84533865-84533884 | Msa1084270:intron | 45.0% |
| GAAGTTTAAGCCAGGTGAAG+AGG | - | chr7_2:84533975-84533994 | Msa1084270:intron | 45.0% | |
| ACAGGATAGAGCTAGAGCTT+TGG | - | chr7_2:84534023-84534042 | Msa1084270:intron | 45.0% | |
| !! | GAGCTAGAGCTTTGGATGAT+TGG | - | chr7_2:84534031-84534050 | Msa1084270:CDS | 45.0% |
| TTGGAAGGATGATAATCCGC+GGG | - | chr7_2:84534050-84534069 | Msa1084270:CDS | 45.0% | |
| AGGGGTAAGCTTCGAATTTC+CGG | + | chr7_2:84534079-84534098 | None:intergenic | 45.0% | |
| AATTCGAAGCTTACCCCTTG+CGG | - | chr7_2:84534081-84534100 | Msa1084270:CDS | 45.0% | |
| CATATAGCTCAACCAGGAGT+GGG | - | chr7_2:84534355-84534374 | Msa1084270:five_prime_UTR | 45.0% | |
| TCCGATGGGTGAGATGAAGA+TGG | - | chr7_2:84530732-84530751 | Msa1084270:three_prime_UTR | 50.0% | |
| GATGGGTGAGATGAAGATGG+AGG | - | chr7_2:84530735-84530754 | Msa1084270:three_prime_UTR | 50.0% | |
| !! | TGTTCAAACAGCGCCGGTAA+CGG | + | chr7_2:84530766-84530785 | None:intergenic | 50.0% |
| CTTGCTTGTTCAAACAGCGC+CGG | + | chr7_2:84530772-84530791 | None:intergenic | 50.0% | |
| ! | TGTTTTGCTGATAGCCGCAC+GGG | - | chr7_2:84531215-84531234 | Msa1084270:intron | 50.0% |
| ATACTCATTCCCAACCCGTG+CGG | + | chr7_2:84531232-84531251 | None:intergenic | 50.0% | |
| CAAGGCTGTGACACCATCTT+CGG | - | chr7_2:84531259-84531278 | Msa1084270:intron | 50.0% | |
| CAACCCCAAGCTTCAGCATT+CGG | + | chr7_2:84531317-84531336 | None:intergenic | 50.0% | |
| GGTAGCTTCCATGGAACCAA+TGG | - | chr7_2:84531416-84531435 | Msa1084270:intron | 50.0% | |
| ! | ACCGATTCTAAAGGCTTCCC+AGG | - | chr7_2:84531915-84531934 | Msa1084270:intron | 50.0% |
| !! | GCCTGGGAAGCCTTTAGAAT+CGG | + | chr7_2:84531919-84531938 | None:intergenic | 50.0% |
| ! | CTCTCACCTTCAGTTTTGCC+TGG | + | chr7_2:84531936-84531955 | None:intergenic | 50.0% |
| !! | TTGAATTGGGTGTTGGGGGA+AGG | + | chr7_2:84531980-84531999 | None:intergenic | 50.0% |
| ! | ATTTTGTGAGGCGATGGAGC+TGG | - | chr7_2:84532099-84532118 | Msa1084270:CDS | 50.0% |
| GGCAGGAGAGGAAGAACTAT+TGG | - | chr7_2:84532476-84532495 | Msa1084270:intron | 50.0% | |
| !! | TGGCATGATGAGCATTGAGC+AGG | + | chr7_2:84532769-84532788 | None:intergenic | 50.0% |
| CCTGATCCCCATCCTAAACA+TGG | + | chr7_2:84533351-84533370 | None:intergenic | 50.0% | |
| ! | CCATGTTTAGGATGGGGATC+AGG | - | chr7_2:84533348-84533367 | Msa1084270:intron | 50.0% |
| GCACATGTGATTGGTGGAGA+TGG | + | chr7_2:84533460-84533479 | None:intergenic | 50.0% | |
| GCGAAGGTAGCACATGTGAT+TGG | + | chr7_2:84533469-84533488 | None:intergenic | 50.0% | |
| TTTGTGTTCGTGTGCTTGCG+AGG | + | chr7_2:84533521-84533540 | None:intergenic | 50.0% | |
| GTGGCCCAAATATCAGTGGT+TGG | + | chr7_2:84533546-84533565 | None:intergenic | 50.0% | |
| ! | GGGCCACAAAGTCTTGTGAA+TGG | - | chr7_2:84533559-84533578 | Msa1084270:intron | 50.0% |
| AGGTCTTCCAACCCAGTCAT+AGG | - | chr7_2:84533617-84533636 | Msa1084270:intron | 50.0% | |
| ! | GATGCCCACTATGAGCATTG+AGG | - | chr7_2:84533858-84533877 | Msa1084270:intron | 50.0% |
| GTTTAAGCCAGGTGAAGAGG+AGG | - | chr7_2:84533978-84533997 | Msa1084270:intron | 50.0% | |
| TGAAGATGACGATGCTGCAC+AGG | - | chr7_2:84534005-84534024 | Msa1084270:intron | 50.0% | |
| TGGAAGGATGATAATCCGCG+GGG | - | chr7_2:84534051-84534070 | Msa1084270:CDS | 50.0% | |
| CCACTCCTGGTTGAGCTATA+TGG | + | chr7_2:84534357-84534376 | None:intergenic | 50.0% | |
| CCATATAGCTCAACCAGGAG+TGG | - | chr7_2:84534354-84534373 | Msa1084270:five_prime_UTR | 50.0% | |
| GATGGAGGACATGCCGTTAC+CGG | - | chr7_2:84530750-84530769 | Msa1084270:three_prime_UTR | 55.0% | |
| CGGCGCTGTTTGAACAAGCA+AGG | - | chr7_2:84530770-84530789 | Msa1084270:three_prime_UTR | 55.0% | |
| AAAGCGTACTTGGTCGGCAC+CGG | + | chr7_2:84530821-84530840 | None:intergenic | 55.0% | |
| GCTTGTCAAGAAGGGATGCG+AGG | - | chr7_2:84530915-84530934 | Msa1084270:three_prime_UTR | 55.0% | |
| !! | CGAAGATGGTGTCACAGCCT+TGG | + | chr7_2:84531261-84531280 | None:intergenic | 55.0% |
| GGCTTCCCAGGCAAAACTGA+AGG | - | chr7_2:84531927-84531946 | Msa1084270:intron | 55.0% | |
| GATGGAGCTGGTCCCAAAAG+AGG | - | chr7_2:84532111-84532130 | Msa1084270:intron | 55.0% | |
| TGCTGATCAGAGGGCCAGAA+AGG | - | chr7_2:84532171-84532190 | Msa1084270:intron | 55.0% | |
| TTCCTCTCCTGCCTCAACAG+GGG | + | chr7_2:84532469-84532488 | None:intergenic | 55.0% | |
| CTTCCTCTCCTGCCTCAACA+GGG | + | chr7_2:84532470-84532489 | None:intergenic | 55.0% | |
| TCTTCCTCTCCTGCCTCAAC+AGG | + | chr7_2:84532471-84532490 | None:intergenic | 55.0% | |
| GAGAGCAAGAATGGCAGCTC+AGG | - | chr7_2:84533597-84533616 | Msa1084270:intron | 55.0% | |
| TAAGCCAGGTGAAGAGGAGG+AGG | - | chr7_2:84533981-84534000 | Msa1084270:intron | 55.0% | |
| TCATCCTCCTCCTCTTCACC+TGG | + | chr7_2:84533988-84534007 | None:intergenic | 55.0% | |
| TTGCTGATAGCCGCACGGGT+TGG | - | chr7_2:84531219-84531238 | Msa1084270:intron | 60.0% | |
| TGCTGATAGCCGCACGGGTT+GGG | - | chr7_2:84531220-84531239 | Msa1084270:intron | 60.0% | |
| AACGAGCGAAAGGAACGGCG+TGG | - | chr7_2:84532414-84532433 | Msa1084270:intron | 60.0% | |
| ACGAGCGAAAGGAACGGCGT+GGG | - | chr7_2:84532415-84532434 | Msa1084270:intron | 60.0% | |
| TGCCTCAACAGGGGTGGACA+GGG | + | chr7_2:84532460-84532479 | None:intergenic | 60.0% | |
| GATGATAATCCGCGGGGTGC+CGG | - | chr7_2:84534057-84534076 | Msa1084270:CDS | 60.0% | |
| TTCGAATTTCCGGCACCCCG+CGG | + | chr7_2:84534069-84534088 | None:intergenic | 60.0% | |
| ! | TTGGTCGGCACCGGACTCAG+TGG | + | chr7_2:84530812-84530831 | None:intergenic | 65.0% |
| TGCCCTGTCCACCCCTGTTG+AGG | - | chr7_2:84532455-84532474 | Msa1084270:intron | 65.0% | |
| CTGCCTCAACAGGGGTGGAC+AGG | + | chr7_2:84532461-84532480 | None:intergenic | 65.0% | |
| CTGTCCACCCCTGTTGAGGC+AGG | - | chr7_2:84532459-84532478 | Msa1084270:intron | 65.0% | |
| CTCTCCTGCCTCAACAGGGG+TGG | + | chr7_2:84532466-84532485 | None:intergenic | 65.0% | |
| CACCCCTGTTGAGGCAGGAG+AGG | - | chr7_2:84532464-84532483 | Msa1084270:intron | 65.0% | |
| CACGCCACCGCCACTGAGTC+CGG | - | chr7_2:84530799-84530818 | Msa1084270:three_prime_UTR | 70.0% | |
| ! | GTCGGCACCGGACTCAGTGG+CGG | + | chr7_2:84530809-84530828 | None:intergenic | 70.0% |
| CGGACTCAGTGGCGGTGGCG+TGG | + | chr7_2:84530801-84530820 | None:intergenic | 75.0% | |
| ! | GGCACCGGACTCAGTGGCGG+TGG | + | chr7_2:84530806-84530825 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84530660 | 84534400 | 84530660 | ID=Msa1084270;Name=Msa1084270 |
| chr7_2 | mRNA | 84530660 | 84534400 | 84530660 | ID=Msa1084270-mRNA-1;Parent=Msa1084270;Name=Msa1084270-mRNA-1;_AED=0.12;_eAED=0.12;_QI=76|1|1|1|1|1|9|293|403 |
| chr7_2 | exon | 84530660 | 84531202 | 84530660 | ID=Msa1084270-mRNA-1:exon:22634;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84531422 | 84531702 | 84531422 | ID=Msa1084270-mRNA-1:exon:22633;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84532056 | 84532127 | 84532056 | ID=Msa1084270-mRNA-1:exon:22632;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84532209 | 84532244 | 84532209 | ID=Msa1084270-mRNA-1:exon:22631;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84532536 | 84532697 | 84532536 | ID=Msa1084270-mRNA-1:exon:22630;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84532868 | 84532972 | 84532868 | ID=Msa1084270-mRNA-1:exon:22629;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84533112 | 84533198 | 84533112 | ID=Msa1084270-mRNA-1:exon:22628;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84534025 | 84534147 | 84534025 | ID=Msa1084270-mRNA-1:exon:22627;Parent=Msa1084270-mRNA-1 |
| chr7_2 | exon | 84534229 | 84534400 | 84534229 | ID=Msa1084270-mRNA-1:exon:22626;Parent=Msa1084270-mRNA-1 |
| chr7_2 | five_prime_UTR | 84534325 | 84534400 | 84534325 | ID=Msa1084270-mRNA-1:five_prime_utr;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84534229 | 84534324 | 84534229 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84534025 | 84534147 | 84534025 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84533112 | 84533198 | 84533112 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84532868 | 84532972 | 84532868 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84532536 | 84532697 | 84532536 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84532209 | 84532244 | 84532209 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84532056 | 84532127 | 84532056 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84531422 | 84531702 | 84531422 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | CDS | 84530953 | 84531202 | 84530953 | ID=Msa1084270-mRNA-1:cds;Parent=Msa1084270-mRNA-1 |
| chr7_2 | three_prime_UTR | 84530660 | 84530952 | 84530660 | ID=Msa1084270-mRNA-1:three_prime_utr;Parent=Msa1084270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
