Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071470 | XP_003610864.1 | 94.737 | 608 | 29 | 3 | 3 | 608 | 1 | 607 | 0.0 | 1187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071470 | sp|Q501D1|Y1490_ARATH | 57.194 | 556 | 227 | 6 | 58 | 607 | 21 | 571 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071470 | G7K6I4 | 94.737 | 608 | 29 | 3 | 3 | 608 | 1 | 607 | 0.0 | 1187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0368370 | Msa1071470 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
| Msa1071470 | Msa1381710 | 0.991601 | 1.606217e-188 | -8.615850e-47 |
| Msa1071470 | Msa1428560 | 0.808413 | 3.135851e-50 | -8.615850e-47 |
| Msa0243820 | Msa1071470 | 0.810724 | 9.998794e-51 | -8.615850e-47 |
| Msa0282500 | Msa1071470 | 0.814021 | 1.904527e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071470 | MtrunA17_Chr5g0395701 | 94.737 | 608 | 29 | 3 | 3 | 608 | 1 | 607 | 0.0 | 1187 |
| Msa1071470 | MtrunA17_Chr4g0039581 | 67.128 | 578 | 180 | 7 | 32 | 608 | 1 | 569 | 0.0 | 788 |
| Msa1071470 | MtrunA17_Chr1g0190341 | 57.455 | 550 | 222 | 4 | 58 | 606 | 20 | 558 | 0.0 | 665 |
| Msa1071470 | MtrunA17_Chr1g0190371 | 57.455 | 550 | 222 | 4 | 58 | 606 | 20 | 558 | 0.0 | 665 |
| Msa1071470 | MtrunA17_Chr2g0310081 | 45.486 | 587 | 289 | 8 | 23 | 606 | 20 | 578 | 1.75e-175 | 510 |
| Msa1071470 | MtrunA17_Chr2g0309191 | 46.112 | 553 | 270 | 9 | 57 | 606 | 25 | 552 | 3.67e-170 | 495 |
| Msa1071470 | MtrunA17_Chr2g0309181 | 44.946 | 554 | 274 | 9 | 60 | 606 | 56 | 585 | 2.53e-163 | 479 |
| Msa1071470 | MtrunA17_Chr4g0074491 | 43.009 | 565 | 289 | 10 | 53 | 606 | 4 | 546 | 2.97e-154 | 454 |
| Msa1071470 | MtrunA17_Chr2g0309171 | 42.237 | 599 | 287 | 13 | 19 | 606 | 601 | 1151 | 2.59e-150 | 462 |
| Msa1071470 | MtrunA17_Chr2g0309171 | 43.438 | 541 | 270 | 10 | 73 | 602 | 14 | 529 | 6.46e-143 | 443 |
| Msa1071470 | MtrunA17_Chr2g0309131 | 41.084 | 572 | 245 | 9 | 42 | 607 | 1 | 486 | 1.51e-142 | 422 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071470 | AT5G43950.1 | 57.739 | 575 | 226 | 6 | 39 | 608 | 4 | 566 | 0.0 | 669 |
| Msa1071470 | AT1G04090.1 | 57.194 | 556 | 227 | 6 | 58 | 607 | 21 | 571 | 0.0 | 661 |
| Msa1071470 | AT3G04350.1 | 54.878 | 574 | 241 | 5 | 39 | 606 | 4 | 565 | 0.0 | 649 |
| Msa1071470 | AT5G18490.1 | 54.895 | 572 | 231 | 8 | 39 | 606 | 3 | 551 | 0.0 | 644 |
| Msa1071470 | AT3G04350.2 | 55.741 | 540 | 221 | 5 | 73 | 606 | 16 | 543 | 0.0 | 625 |
| Msa1071470 | AT2G44230.1 | 45.242 | 557 | 271 | 9 | 55 | 606 | 14 | 541 | 4.69e-162 | 474 |
| Msa1071470 | AT2G44260.1 | 44.118 | 578 | 284 | 12 | 40 | 606 | 3 | 552 | 1.90e-160 | 471 |
| Msa1071470 | AT2G44260.2 | 44.917 | 541 | 264 | 10 | 72 | 606 | 70 | 582 | 1.48e-155 | 459 |
| Msa1071470 | AT3G01870.1 | 42.707 | 569 | 272 | 12 | 55 | 606 | 52 | 583 | 2.19e-142 | 426 |
| Msa1071470 | AT3G01880.1 | 41.958 | 572 | 278 | 13 | 55 | 608 | 56 | 591 | 9.33e-138 | 414 |
Find 152 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCACGAATTTCCATTT+TGG | 0.139701 | 7_2:+68000586 | Msa1071470:CDS |
| GAACAAATGATGGGGAATTT+TGG | 0.167237 | 7_2:+68000940 | Msa1071470:CDS |
| AACCTAGCTACAAGCCTTTA+TGG | 0.169684 | 7_2:+68000250 | Msa1071470:CDS |
| GGACCTTCTACTCTCAAATT+TGG | 0.175428 | 7_2:+68001104 | Msa1071470:CDS |
| CAACTAATTTCATCTAAATT+AGG | 0.185035 | 7_2:-68000501 | None:intergenic |
| AATGAACTTCTAAGCCTTAA+AGG | 0.224297 | 7_2:-68001566 | None:intergenic |
| CACAGCACAGTGGTGGTAAA+TGG | 0.225044 | 7_2:+68001234 | Msa1071470:CDS |
| TTGTACCGAAAGGGTGTTTC+TGG | 0.228534 | 7_2:+68000873 | Msa1071470:CDS |
| TTATTCATTCATCACAATAT+AGG | 0.252294 | 7_2:+68001790 | Msa1071470:three_prime_UTR |
| ACTTGCCTTCTTCTGTTGAT+TGG | 0.274633 | 7_2:+68000829 | Msa1071470:CDS |
| ATTTATCAAACACGGGGATT+TGG | 0.281262 | 7_2:+68000995 | Msa1071470:CDS |
| CTCAAACTCCAAACCCAAAA+TGG | 0.284220 | 7_2:-68000600 | None:intergenic |
| GCTCTATAAGCGCATGTATT+TGG | 0.287269 | 7_2:-68000767 | None:intergenic |
| TATTCATTCATCACAATATA+GGG | 0.289124 | 7_2:+68001791 | Msa1071470:three_prime_UTR |
| TTGATTCTGCTGCTTACTTT+TGG | 0.308078 | 7_2:+68000415 | Msa1071470:CDS |
| CCCTGTGACCGTGGTATGTT+AGG | 0.309045 | 7_2:+68000624 | Msa1071470:CDS |
| CCAAAGCTGGTAATTTGTTA+TGG | 0.310652 | 7_2:-68000326 | None:intergenic |
| ACGGTAAGGTTCACATTTAT+CGG | 0.312398 | 7_2:-68000541 | None:intergenic |
| CTAGTATGGTGCACTAATTC+AGG | 0.318499 | 7_2:+68000369 | Msa1071470:CDS |
| TTCCAAATGATAAAAGTAGA+AGG | 0.333241 | 7_2:+68000970 | Msa1071470:CDS |
| ACCTAGCTACAAGCCTTTAT+GGG | 0.339309 | 7_2:+68000251 | Msa1071470:CDS |
| TCACAAAGTTTGAGACTGTT+TGG | 0.349310 | 7_2:+68000133 | Msa1071470:CDS |
| CAAAACTTGGAATTGGTATC+AGG | 0.354205 | 7_2:+68001366 | Msa1071470:CDS |
| ATTCCAAATTTGAGAGTAGA+AGG | 0.364392 | 7_2:-68001107 | None:intergenic |
| CCATAACAAATTACCAGCTT+TGG | 0.368639 | 7_2:+68000326 | Msa1071470:CDS |
| TTAAGGCTTAGAAGTTCATT+TGG | 0.371438 | 7_2:+68001569 | Msa1071470:CDS |
| CCAAGAGCCTTGTAACCTTC+AGG | 0.373592 | 7_2:-68000450 | None:intergenic |
| TTACAAGGCTCTTGGCTACT+TGG | 0.375921 | 7_2:+68000458 | Msa1071470:CDS |
| CTCTTGATTATACACTAGTA+TGG | 0.389244 | 7_2:+68000355 | Msa1071470:CDS |
| CCCGGTGGAGGAACAAATGA+TGG | 0.402458 | 7_2:+68000930 | Msa1071470:CDS |
| TCTGAGGAACCAAGTGTTAC+GGG | 0.402750 | 7_2:+67998995 | Msa1071470:CDS |
| CCCATCATTTGTTCCTCCAC+CGG | 0.404728 | 7_2:-68000931 | None:intergenic |
| CATGCGCTTATAGAGCATTA+TGG | 0.407024 | 7_2:+68000774 | Msa1071470:CDS |
| GGATCGTCAAAACTTGGAAT+TGG | 0.408909 | 7_2:+68001359 | Msa1071470:CDS |
| CATCTAAATTAGGCTTCTTA+CGG | 0.416993 | 7_2:-68000491 | None:intergenic |
| AAACACCCTTTCGGTACAAA+AGG | 0.418519 | 7_2:-68000869 | None:intergenic |
| CGCCTCCAGAAACACCCTTT+CGG | 0.419938 | 7_2:-68000878 | None:intergenic |
| AAGGTTCACATTTATCGGTT+AGG | 0.425276 | 7_2:-68000536 | None:intergenic |
| AGCAAAGTTGGTGAACATAT+AGG | 0.438872 | 7_2:+68001146 | Msa1071470:CDS |
| TGCATTTGGAGCGAAGCATA+TGG | 0.440207 | 7_2:-67999058 | None:intergenic |
| TTGGTGAACATATAGGTGAT+TGG | 0.444018 | 7_2:+68001153 | Msa1071470:CDS |
| ATGATCGGATGCATTGGGTT+TGG | 0.445916 | 7_2:-67999096 | None:intergenic |
| ATTGTTGCAGCTGAGTATTT+AGG | 0.446537 | 7_2:+68001440 | Msa1071470:CDS |
| TACCGTACATTACTTGATGC+TGG | 0.447194 | 7_2:+68000558 | Msa1071470:CDS |
| CCAGATGGATTTCACATCCT+TGG | 0.449720 | 7_2:+68000216 | Msa1071470:CDS |
| TATGAATTAGAGTATATTGA+TGG | 0.450379 | 7_2:+68001266 | Msa1071470:CDS |
| CCCTAACATACCACGGTCAC+AGG | 0.451878 | 7_2:-68000625 | None:intergenic |
| TTTACTGCAGTGGTTGTTGT+TGG | 0.452580 | 7_2:+68000670 | Msa1071470:CDS |
| TATGGTGAGGAAGGTCCTAC+AGG | 0.453139 | 7_2:+68001623 | Msa1071470:CDS |
| AAATTCTTCAAACACACAAC+AGG | 0.455952 | 7_2:-68000711 | None:intergenic |
| ATACAAGGATCGTCAAAACT+TGG | 0.457651 | 7_2:+68001353 | Msa1071470:CDS |
| GCAAGTACAAAACCCCATAA+AGG | 0.458789 | 7_2:-68000264 | None:intergenic |
| GATCCTTGTATATAGGTTCC+AGG | 0.460143 | 7_2:-68001341 | None:intergenic |
| GTAACTTCACTGGAGAACTT+TGG | 0.460209 | 7_2:+68001198 | Msa1071470:CDS |
| TGGTGAACATATAGGTGATT+GGG | 0.464800 | 7_2:+68001154 | Msa1071470:CDS |
| TGTATATAGGTTCCAGGATG+AGG | 0.471629 | 7_2:-68001335 | None:intergenic |
| CCTTGAGGCCATTGAGGAAG+AGG | 0.473899 | 7_2:-67999158 | None:intergenic |
| ATCTGAGGAACCAAGTGTTA+CGG | 0.474973 | 7_2:+67998994 | Msa1071470:CDS |
| ACAGCACAGTGGTGGTAAAT+GGG | 0.478438 | 7_2:+68001235 | Msa1071470:CDS |
| GTTGCAGTATATGAGACAAT+GGG | 0.481252 | 7_2:+68001487 | Msa1071470:CDS |
| ACCGTGGTATGTTAGGGAAA+GGG | 0.483580 | 7_2:+68000631 | Msa1071470:CDS |
| GTTCATGTGAAACCAGCATT+TGG | 0.492138 | 7_2:+68001035 | Msa1071470:CDS |
| GAAGGCAAGTAAATTTCCTC+TGG | 0.494221 | 7_2:-68000816 | None:intergenic |
| TCAACACTCCTCTTCCTCAA+TGG | 0.495707 | 7_2:+67999150 | Msa1071470:CDS |
| GTGAAAGTTCCACCAAATGC+TGG | 0.501784 | 7_2:-68001047 | None:intergenic |
| CCATCATTTGTTCCTCCACC+GGG | 0.501856 | 7_2:-68000930 | None:intergenic |
| CCAAGGATGTGAAATCCATC+TGG | 0.503558 | 7_2:-68000216 | None:intergenic |
| GCTTCTGGAATTGTGAACCT+TGG | 0.503605 | 7_2:+68000090 | Msa1071470:CDS |
| TCAAGAGGGTTCTCCAAAGC+TGG | 0.506894 | 7_2:-68000339 | None:intergenic |
| AAGTAAGCAGCAGAATCAAC+CGG | 0.508782 | 7_2:-68000411 | None:intergenic |
| CACGGCATTGCTGATAGCGT+TGG | 0.508920 | 7_2:-68000738 | None:intergenic |
| CTCATATACTGCAACCATTG+AGG | 0.510301 | 7_2:-68001479 | None:intergenic |
| CCTGAAGGTTACAAGGCTCT+TGG | 0.512936 | 7_2:+68000450 | Msa1071470:CDS |
| TTAGGGAAAGGGGTTTCAGT+AGG | 0.513416 | 7_2:+68000642 | Msa1071470:CDS |
| ATGATGATGATCGGATGCAT+TGG | 0.513727 | 7_2:-67999102 | None:intergenic |
| TGATGATGATCGGATGCATT+GGG | 0.516859 | 7_2:-67999101 | None:intergenic |
| TTGTAACCTTCAGGAGGTTG+AGG | 0.516986 | 7_2:-68000441 | None:intergenic |
| TCAACCTCCTGAAGGTTACA+AGG | 0.518511 | 7_2:+68000443 | Msa1071470:CDS |
| CCGTGGTATGTTAGGGAAAG+GGG | 0.522778 | 7_2:+68000632 | Msa1071470:CDS |
| CATCCTGGAACCTATATACA+AGG | 0.523885 | 7_2:+68001338 | Msa1071470:CDS |
| GTTCCTCAGATTGATTAAAG+TGG | 0.527441 | 7_2:-67998982 | None:intergenic |
| CTTCGAATAAGTAACTTCAC+TGG | 0.528369 | 7_2:+68001188 | Msa1071470:CDS |
| AAGCTTCCTGTGGAACTGTA+TGG | 0.531076 | 7_2:+68001605 | Msa1071470:CDS |
| CCTCTTCCTCAATGGCCTCA+AGG | 0.531772 | 7_2:+67999158 | Msa1071470:CDS |
| GTTATACCTTGAGGCCATTG+AGG | 0.537258 | 7_2:-67999164 | None:intergenic |
| CCTGTGACCGTGGTATGTTA+GGG | 0.540441 | 7_2:+68000625 | Msa1071470:CDS |
| TCCAAATGATAAAAGTAGAA+GGG | 0.543171 | 7_2:+68000971 | Msa1071470:CDS |
| TAGGGAAAGGGGTTTCAGTA+GGG | 0.545626 | 7_2:+68000643 | Msa1071470:CDS |
| TGGCTACCTCAACCTCCTGA+AGG | 0.547085 | 7_2:+68000435 | Msa1071470:CDS |
| AATCCATCTGGTACTCCCAC+TGG | 0.548701 | 7_2:-68000204 | None:intergenic |
| GACCGTGGTATGTTAGGGAA+AGG | 0.549630 | 7_2:+68000630 | Msa1071470:CDS |
| AACACCCTTTCGGTACAAAA+GGG | 0.549967 | 7_2:-68000868 | None:intergenic |
| ACACAGTGACAAAGAGAGAA+AGG | 0.550607 | 7_2:+67998869 | Msa1071470:five_prime_UTR |
| CATGCAAGTTACCCTCATCC+TGG | 0.555899 | 7_2:+68001323 | Msa1071470:CDS |
| TCCTCACCATACAGTTCCAC+AGG | 0.556027 | 7_2:-68001611 | None:intergenic |
| TCTGGATGAAAGAAAACAGT+AGG | 0.556534 | 7_2:-68000798 | None:intergenic |
| AGAGTAGAAGGTCCATTGAA+AGG | 0.557117 | 7_2:-68001095 | None:intergenic |
| ATGGTTGCTAATGTTATATG+AGG | 0.557837 | 7_2:-68000307 | None:intergenic |
| AAGAAAGAAAATCGCCATGC+CGG | 0.560298 | 7_2:+68000392 | Msa1071470:CDS |
| TACCGAAAGGGTGTTTCTGG+AGG | 0.563977 | 7_2:+68000876 | Msa1071470:CDS |
| TTCCAGCATCAAGTAATGTA+CGG | 0.564801 | 7_2:-68000560 | None:intergenic |
| CCCCATAAAGGCTTGTAGCT+AGG | 0.566011 | 7_2:-68000252 | None:intergenic |
| CATGTGAAACCAGCATTTGG+TGG | 0.567022 | 7_2:+68001038 | Msa1071470:CDS |
| GCATCAAGTAATGTACGGTA+AGG | 0.567450 | 7_2:-68000555 | None:intergenic |
| TCGGATGCATTGGGTTTGGA+AGG | 0.573549 | 7_2:-67999092 | None:intergenic |
| GGTTGCAGTATATGAGACAA+TGG | 0.577104 | 7_2:+68001486 | Msa1071470:CDS |
| CCGGTGGAGGAACAAATGAT+GGG | 0.577469 | 7_2:+68000931 | Msa1071470:CDS |
| AGTAAAGAACCCGTAACACT+TGG | 0.579715 | 7_2:-67999004 | None:intergenic |
| GAAGGGAATTTATCAAACAC+GGG | 0.582141 | 7_2:+68000988 | Msa1071470:CDS |
| CCTAGCTACAAGCCTTTATG+GGG | 0.589573 | 7_2:+68000252 | Msa1071470:CDS |
| AAACCAGTGGGAGTACCAGA+TGG | 0.591413 | 7_2:+68000201 | Msa1071470:CDS |
| GTATATAGGTTCCAGGATGA+GGG | 0.595393 | 7_2:-68001334 | None:intergenic |
| AGCGAAGCATATGGAAGAGA+AGG | 0.597525 | 7_2:-67999049 | None:intergenic |
| AGAAGGGAATTTATCAAACA+CGG | 0.598533 | 7_2:+68000987 | Msa1071470:CDS |
| ATTATTTGACTAAATTCGTG+TGG | 0.598936 | 7_2:-68001708 | None:intergenic |
| AAGAAGAAGATGATGATGAT+CGG | 0.599526 | 7_2:-67999111 | None:intergenic |
| CTTTCACAGACATTGTAATG+TGG | 0.602196 | 7_2:+68001063 | Msa1071470:CDS |
| CATACTAGTGTATAATCAAG+AGG | 0.607012 | 7_2:-68000354 | None:intergenic |
| ACTGGATTGGAGATGAAAGA+TGG | 0.607537 | 7_2:+68001663 | Msa1071470:CDS |
| GGAGGCGAGACTATCGATGA+AGG | 0.612794 | 7_2:+68000894 | Msa1071470:CDS |
| TTTGTTTAGAAAGCTTCCTG+TGG | 0.616442 | 7_2:+68001595 | Msa1071470:CDS |
| CAACGCTATCAGCAATGCCG+TGG | 0.618471 | 7_2:+68000739 | Msa1071470:CDS |
| AGCAGCAGAATCAACCGGCA+TGG | 0.620057 | 7_2:-68000406 | None:intergenic |
| GCATGTATTTGGTCGATCCA+CGG | 0.622544 | 7_2:-68000756 | None:intergenic |
| CATATAATTACAAACACTTG+TGG | 0.623185 | 7_2:-68001745 | None:intergenic |
| GTGGAACTGTATGGTGAGGA+AGG | 0.624680 | 7_2:+68001614 | Msa1071470:CDS |
| CAACCACTTTAATCAATCTG+AGG | 0.628429 | 7_2:+67998979 | Msa1071470:CDS |
| CCTAACATACCACGGTCACA+GGG | 0.635491 | 7_2:-68000624 | None:intergenic |
| GGCGAGACTATCGATGAAGG+TGG | 0.637509 | 7_2:+68000897 | Msa1071470:CDS |
| TGCATACTTCAATTTCACCA+AGG | 0.639336 | 7_2:-68000107 | None:intergenic |
| CCCCTTTCCCTAACATACCA+CGG | 0.642679 | 7_2:-68000632 | None:intergenic |
| ATGGTGAGGAAGGTCCTACA+GGG | 0.644246 | 7_2:+68001624 | Msa1071470:CDS |
| AGCATATGGAAGAGAAGGTG+CGG | 0.644580 | 7_2:-67999044 | None:intergenic |
| TAGGTTGACAATAGTGACCA+AGG | 0.646845 | 7_2:-68000233 | None:intergenic |
| GTTGCATTCTATAAACCAGT+GGG | 0.653192 | 7_2:+68000189 | Msa1071470:CDS |
| CTGGATGAAAGAAAACAGTA+GGG | 0.660966 | 7_2:-68000797 | None:intergenic |
| CGGTGGAGGAACAAATGATG+GGG | 0.661232 | 7_2:+68000932 | Msa1071470:CDS |
| AGTTTGAGACCCTGTGACCG+TGG | 0.661594 | 7_2:+68000615 | Msa1071470:CDS |
| TTGGAACAGCAATGTGATGG+TGG | 0.664789 | 7_2:+68000152 | Msa1071470:CDS |
| TGTTGCATTCTATAAACCAG+TGG | 0.664919 | 7_2:+68000188 | Msa1071470:CDS |
| AGAGCCTTGTAACCTTCAGG+AGG | 0.667379 | 7_2:-68000447 | None:intergenic |
| ATGTTGTGAAAGAACCTCAA+TGG | 0.675895 | 7_2:+68001465 | Msa1071470:CDS |
| ATACTAGTGTATAATCAAGA+GGG | 0.679181 | 7_2:-68000353 | None:intergenic |
| TCCTGTGGAACTGTATGGTG+AGG | 0.682195 | 7_2:+68001610 | Msa1071470:CDS |
| TATTACTCACAGCACAGTGG+TGG | 0.685056 | 7_2:+68001227 | Msa1071470:CDS |
| TAGACGTAGTAATTTGCGTG+TGG | 0.689667 | 7_2:+68001397 | Msa1071470:CDS |
| AGTGGTTGTTGTTGGAACAA+CGG | 0.703604 | 7_2:+68000678 | Msa1071470:CDS |
| AAGGGAATTTATCAAACACG+GGG | 0.703962 | 7_2:+68000989 | Msa1071470:CDS |
| ATATGGAAGAGAAGGTGCGG+AGG | 0.709050 | 7_2:-67999041 | None:intergenic |
| TGTTTGGAACAGCAATGTGA+TGG | 0.709746 | 7_2:+68000149 | Msa1071470:CDS |
| TTGCAGTATATGAGACAATG+GGG | 0.725300 | 7_2:+68001488 | Msa1071470:CDS |
| ATATATTACTCACAGCACAG+TGG | 0.799299 | 7_2:+68001224 | Msa1071470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATATAATGAATAAAAAAA+TGG | - | chr7_2:67999200-67999219 | None:intergenic | 10.0% |
| !! | AATTTACTTGACTATTATTT+AGG | + | chr7_2:67999781-67999800 | Msa1071470:intron | 15.0% |
| !! | TCTTCTAATCAAATTAAATA+TGG | + | chr7_2:67999865-67999884 | Msa1071470:intron | 15.0% |
| !!! | TTTGAATCATAAACAATTTT+AGG | - | chr7_2:68001515-68001534 | None:intergenic | 15.0% |
| !! | ATTTGAGTGGTAAAAAAAAA+AGG | - | chr7_2:67999348-67999367 | None:intergenic | 20.0% |
| !! | AGTAACAAATTTCTTCTAAT+CGG | + | chr7_2:67999672-67999691 | Msa1071470:intron | 20.0% |
| !! | AGTCAAGTAAATTATAAGAA+AGG | - | chr7_2:67999774-67999793 | None:intergenic | 20.0% |
| !!! | ATTTAATTTGATTAGAAGAC+AGG | - | chr7_2:67999864-67999883 | None:intergenic | 20.0% |
| !! | GTTAATTTACCAATCAATAA+AGG | + | chr7_2:67999887-67999906 | Msa1071470:intron | 20.0% |
| !! | ACAATAACTTGATTAGAAAA+GGG | - | chr7_2:68000026-68000045 | None:intergenic | 20.0% |
| !! | AACAATAACTTGATTAGAAA+AGG | - | chr7_2:68000027-68000046 | None:intergenic | 20.0% |
| !!! | GTAATTATTTTACTGATTAC+AGG | + | chr7_2:68000057-68000076 | Msa1071470:intron | 20.0% |
| !! | CAACTAATTTCATCTAAATT+AGG | - | chr7_2:68000504-68000523 | None:intergenic | 20.0% |
| !! | TATGAATTAGAGTATATTGA+TGG | + | chr7_2:68001266-68001285 | Msa1071470:CDS | 20.0% |
| !! | TTATTCATTCATCACAATAT+AGG | + | chr7_2:68001790-68001809 | Msa1071470:three_prime_UTR | 20.0% |
| !! | TATTCATTCATCACAATATA+GGG | + | chr7_2:68001791-68001810 | Msa1071470:three_prime_UTR | 20.0% |
| !!! | AAGTATCGTTTTCAATTGAA+GGG | - | chr7_2:67998902-67998921 | None:intergenic | 25.0% |
| ! | TCTTCAAAATCAAGTTAACA+TGG | - | chr7_2:67999429-67999448 | None:intergenic | 25.0% |
| ! | GTAACAAATTTCTTCTAATC+GGG | + | chr7_2:67999673-67999692 | Msa1071470:intron | 25.0% |
| ! | TTGACTATTATTTAGGTCAT+TGG | + | chr7_2:67999788-67999807 | Msa1071470:intron | 25.0% |
| ! | AAGATGAAACCTTTATTGAT+TGG | - | chr7_2:67999899-67999918 | None:intergenic | 25.0% |
| ! | AGTTAAATTGCTTAGAAGAA+AGG | - | chr7_2:67999939-67999958 | None:intergenic | 25.0% |
| !! | TCTTCTAAGCAATTTAACTT+TGG | + | chr7_2:67999940-67999959 | Msa1071470:intron | 25.0% |
| !! | TTTAACTTTGGTTAAGTCAT+TGG | + | chr7_2:67999952-67999971 | Msa1071470:intron | 25.0% |
| ! | GATTGATATTTCTTCTTATC+TGG | + | chr7_2:67999984-68000003 | Msa1071470:intron | 25.0% |
| ! | CAAGTTATTGTTTATATGTC+TGG | + | chr7_2:68000035-68000054 | Msa1071470:intron | 25.0% |
| ! | ATACTAGTGTATAATCAAGA+GGG | - | chr7_2:68000356-68000375 | None:intergenic | 25.0% |
| !! | TAATTCACGAATTTCCATTT+TGG | + | chr7_2:68000586-68000605 | Msa1071470:CDS | 25.0% |
| !! | AATTCACGAATTTCCATTTT+GGG | + | chr7_2:68000587-68000606 | Msa1071470:CDS | 25.0% |
| ! | TTCCAAATGATAAAAGTAGA+AGG | + | chr7_2:68000970-68000989 | Msa1071470:CDS | 25.0% |
| ! | TCCAAATGATAAAAGTAGAA+GGG | + | chr7_2:68000971-68000990 | Msa1071470:CDS | 25.0% |
| ! | ATTGTATACGCATCAAAAAA+TGG | + | chr7_2:68001299-68001318 | Msa1071470:CDS | 25.0% |
| !! | TTTTAAACTCTCTTCCTTTA+AGG | + | chr7_2:68001552-68001571 | Msa1071470:CDS | 25.0% |
| !!! | ATCCAGTTATTTTTCTCTTT+TGG | - | chr7_2:68001650-68001669 | None:intergenic | 25.0% |
| ! | AAAGAGAAAAATAACTGGAT+TGG | + | chr7_2:68001650-68001669 | Msa1071470:CDS | 25.0% |
| ! | ATTATTTGACTAAATTCGTG+TGG | - | chr7_2:68001711-68001730 | None:intergenic | 25.0% |
| ! | CATATAATTACAAACACTTG+TGG | - | chr7_2:68001748-68001767 | None:intergenic | 25.0% |
| !!! | GAAGTATCGTTTTCAATTGA+AGG | - | chr7_2:67998903-67998922 | None:intergenic | 30.0% |
| ! | AAGAAGAAGATGATGATGAT+CGG | - | chr7_2:67999114-67999133 | None:intergenic | 30.0% |
| GTTGTTATAGTTATACCTTG+AGG | - | chr7_2:67999176-67999195 | None:intergenic | 30.0% | |
| CTAGAACATTAACATAGCAA+AGG | - | chr7_2:67999279-67999298 | None:intergenic | 30.0% | |
| TCGATAAGATAGTAATCATG+AGG | - | chr7_2:67999398-67999417 | None:intergenic | 30.0% | |
| AGAAACCAATCAACTTAACT+AGG | + | chr7_2:67999446-67999465 | Msa1071470:intron | 30.0% | |
| !! | GTAATCCTAGTTAAGTTGAT+TGG | - | chr7_2:67999454-67999473 | None:intergenic | 30.0% |
| TTCACTTGATTACTTTACTG+TGG | + | chr7_2:67999492-67999511 | Msa1071470:intron | 30.0% | |
| TATGTTTGTTTGATGTGAAC+TGG | + | chr7_2:67999524-67999543 | Msa1071470:intron | 30.0% | |
| ATGTTTGTTTGATGTGAACT+GGG | + | chr7_2:67999525-67999544 | Msa1071470:intron | 30.0% | |
| ! | TGATTTAACCATAGTCTTGA+GGG | - | chr7_2:67999609-67999628 | None:intergenic | 30.0% |
| ! | TTGATTTAACCATAGTCTTG+AGG | - | chr7_2:67999610-67999629 | None:intergenic | 30.0% |
| TAATCGGGTTAACTATGTTT+AGG | + | chr7_2:67999688-67999707 | Msa1071470:intron | 30.0% | |
| GTTAACTATGTTTAGGTCAT+CGG | + | chr7_2:67999695-67999714 | Msa1071470:intron | 30.0% | |
| ! | TTTAGGTCATTGGTTAACAA+AGG | + | chr7_2:67999798-67999817 | Msa1071470:intron | 30.0% |
| ACTATAGTTCATCAGATTAG+AGG | - | chr7_2:67999834-67999853 | None:intergenic | 30.0% | |
| !! | TATTTTACTGATTACAGGAC+AGG | + | chr7_2:68000062-68000081 | Msa1071470:intron | 30.0% |
| ATGGTTGCTAATGTTATATG+AGG | - | chr7_2:68000310-68000329 | None:intergenic | 30.0% | |
| CATACTAGTGTATAATCAAG+AGG | - | chr7_2:68000357-68000376 | None:intergenic | 30.0% | |
| CTCTTGATTATACACTAGTA+TGG | + | chr7_2:68000355-68000374 | Msa1071470:CDS | 30.0% | |
| CATCTAAATTAGGCTTCTTA+CGG | - | chr7_2:68000494-68000513 | None:intergenic | 30.0% | |
| AAATTCTTCAAACACACAAC+AGG | - | chr7_2:68000714-68000733 | None:intergenic | 30.0% | |
| AAAAACCAATCAACAGAAGA+AGG | - | chr7_2:68000837-68000856 | None:intergenic | 30.0% | |
| !!! | GTTGATTGGTTTTTCAACAA+TGG | + | chr7_2:68000843-68000862 | Msa1071470:CDS | 30.0% |
| !! | TCCCTTCTACTTTTATCATT+TGG | - | chr7_2:68000975-68000994 | None:intergenic | 30.0% |
| AGAAGGGAATTTATCAAACA+CGG | + | chr7_2:68000987-68001006 | Msa1071470:CDS | 30.0% | |
| !!! | TGGATTTTTTGTCCTTTCAA+TGG | + | chr7_2:68001083-68001102 | Msa1071470:CDS | 30.0% |
| ATTCCAAATTTGAGAGTAGA+AGG | - | chr7_2:68001110-68001129 | None:intergenic | 30.0% | |
| ! | TTTTGACGATCCTTGTATAT+AGG | - | chr7_2:68001351-68001370 | None:intergenic | 30.0% |
| AATGAACTTCTAAGCCTTAA+AGG | - | chr7_2:68001569-68001588 | None:intergenic | 30.0% | |
| TTAAGGCTTAGAAGTTCATT+TGG | + | chr7_2:68001569-68001588 | Msa1071470:CDS | 30.0% | |
| ! | TCGTTTTCAATTGAAGGGAA+CGG | - | chr7_2:67998897-67998916 | None:intergenic | 35.0% |
| CAACCACTTTAATCAATCTG+AGG | + | chr7_2:67998979-67998998 | Msa1071470:CDS | 35.0% | |
| GTTCCTCAGATTGATTAAAG+TGG | - | chr7_2:67998985-67999004 | None:intergenic | 35.0% | |
| AGGAAAAAAGCAGTTGCATT+TGG | - | chr7_2:67999075-67999094 | None:intergenic | 35.0% | |
| !! | GTGTTGAGAGAAAAAGTGTT+GGG | - | chr7_2:67999137-67999156 | None:intergenic | 35.0% |
| ! | AGTGTTGAGAGAAAAAGTGT+TGG | - | chr7_2:67999138-67999157 | None:intergenic | 35.0% |
| GCAGAAAAGAGAAATTTGAG+TGG | - | chr7_2:67999361-67999380 | None:intergenic | 35.0% | |
| TGCATACTTCAATTTCACCA+AGG | - | chr7_2:68000110-68000129 | None:intergenic | 35.0% | |
| ! | TCACAAAGTTTGAGACTGTT+TGG | + | chr7_2:68000133-68000152 | Msa1071470:CDS | 35.0% |
| ! | TAGAATGCAACAGCTTTTCT+TGG | - | chr7_2:68000180-68000199 | None:intergenic | 35.0% |
| TGTTGCATTCTATAAACCAG+TGG | + | chr7_2:68000188-68000207 | Msa1071470:CDS | 35.0% | |
| GTTGCATTCTATAAACCAGT+GGG | + | chr7_2:68000189-68000208 | Msa1071470:CDS | 35.0% | |
| !! | CCAAAGCTGGTAATTTGTTA+TGG | - | chr7_2:68000329-68000348 | None:intergenic | 35.0% |
| CCATAACAAATTACCAGCTT+TGG | + | chr7_2:68000326-68000345 | Msa1071470:CDS | 35.0% | |
| !! | TTGATTCTGCTGCTTACTTT+TGG | + | chr7_2:68000415-68000434 | Msa1071470:CDS | 35.0% |
| ! | AAGGTTCACATTTATCGGTT+AGG | - | chr7_2:68000539-68000558 | None:intergenic | 35.0% |
| ACGGTAAGGTTCACATTTAT+CGG | - | chr7_2:68000544-68000563 | None:intergenic | 35.0% | |
| TTCCAGCATCAAGTAATGTA+CGG | - | chr7_2:68000563-68000582 | None:intergenic | 35.0% | |
| !!! | ACGAATTTCCATTTTGGGTT+TGG | + | chr7_2:68000592-68000611 | Msa1071470:CDS | 35.0% |
| CTGGATGAAAGAAAACAGTA+GGG | - | chr7_2:68000800-68000819 | None:intergenic | 35.0% | |
| TCTGGATGAAAGAAAACAGT+AGG | - | chr7_2:68000801-68000820 | None:intergenic | 35.0% | |
| ! | TACTGTTTTCTTTCATCCAG+AGG | + | chr7_2:68000800-68000819 | Msa1071470:CDS | 35.0% |
| !! | GAACAAATGATGGGGAATTT+TGG | + | chr7_2:68000940-68000959 | Msa1071470:CDS | 35.0% |
| GAAGGGAATTTATCAAACAC+GGG | + | chr7_2:68000988-68001007 | Msa1071470:CDS | 35.0% | |
| AAGGGAATTTATCAAACACG+GGG | + | chr7_2:68000989-68001008 | Msa1071470:CDS | 35.0% | |
| ATTTATCAAACACGGGGATT+TGG | + | chr7_2:68000995-68001014 | Msa1071470:CDS | 35.0% | |
| CTTTCACAGACATTGTAATG+TGG | + | chr7_2:68001063-68001082 | Msa1071470:CDS | 35.0% | |
| ! | AGCATGTCTTTTAGCAAAGT+TGG | + | chr7_2:68001134-68001153 | Msa1071470:CDS | 35.0% |
| !! | AGCAAAGTTGGTGAACATAT+AGG | + | chr7_2:68001146-68001165 | Msa1071470:CDS | 35.0% |
| TTGGTGAACATATAGGTGAT+TGG | + | chr7_2:68001153-68001172 | Msa1071470:CDS | 35.0% | |
| TGGTGAACATATAGGTGATT+GGG | + | chr7_2:68001154-68001173 | Msa1071470:CDS | 35.0% | |
| CTTCGAATAAGTAACTTCAC+TGG | + | chr7_2:68001188-68001207 | Msa1071470:CDS | 35.0% | |
| ATATATTACTCACAGCACAG+TGG | + | chr7_2:68001224-68001243 | Msa1071470:CDS | 35.0% | |
| ATACAAGGATCGTCAAAACT+TGG | + | chr7_2:68001353-68001372 | Msa1071470:CDS | 35.0% | |
| CAAAACTTGGAATTGGTATC+AGG | + | chr7_2:68001366-68001385 | Msa1071470:CDS | 35.0% | |
| ATTGTTGCAGCTGAGTATTT+AGG | + | chr7_2:68001440-68001459 | Msa1071470:CDS | 35.0% | |
| ATGTTGTGAAAGAACCTCAA+TGG | + | chr7_2:68001465-68001484 | Msa1071470:CDS | 35.0% | |
| GTTGCAGTATATGAGACAAT+GGG | + | chr7_2:68001487-68001506 | Msa1071470:CDS | 35.0% | |
| TTGCAGTATATGAGACAATG+GGG | + | chr7_2:68001488-68001507 | Msa1071470:CDS | 35.0% | |
| TTTGTTTAGAAAGCTTCCTG+TGG | + | chr7_2:68001595-68001614 | Msa1071470:CDS | 35.0% | |
| GGCCAAAAGAGAAAAATAAC+TGG | + | chr7_2:68001645-68001664 | Msa1071470:CDS | 35.0% | |
| ACACAGTGACAAAGAGAGAA+AGG | + | chr7_2:67998869-67998888 | Msa1071470:five_prime_UTR | 40.0% | |
| ! | CGTTTTCAATTGAAGGGAAC+GGG | - | chr7_2:67998896-67998915 | None:intergenic | 40.0% |
| ATCTGAGGAACCAAGTGTTA+CGG | + | chr7_2:67998994-67999013 | Msa1071470:CDS | 40.0% | |
| AGTAAAGAACCCGTAACACT+TGG | - | chr7_2:67999007-67999026 | None:intergenic | 40.0% | |
| ! | TGATGATGATCGGATGCATT+GGG | - | chr7_2:67999104-67999123 | None:intergenic | 40.0% |
| ! | ATGATGATGATCGGATGCAT+TGG | - | chr7_2:67999105-67999124 | None:intergenic | 40.0% |
| ! | TGTTTGGAACAGCAATGTGA+TGG | + | chr7_2:68000149-68000168 | Msa1071470:CDS | 40.0% |
| ! | TAGGTTGACAATAGTGACCA+AGG | - | chr7_2:68000236-68000255 | None:intergenic | 40.0% |
| AACCTAGCTACAAGCCTTTA+TGG | + | chr7_2:68000250-68000269 | Msa1071470:CDS | 40.0% | |
| ACCTAGCTACAAGCCTTTAT+GGG | + | chr7_2:68000251-68000270 | Msa1071470:CDS | 40.0% | |
| GCAAGTACAAAACCCCATAA+AGG | - | chr7_2:68000267-68000286 | None:intergenic | 40.0% | |
| CTAGTATGGTGCACTAATTC+AGG | + | chr7_2:68000369-68000388 | Msa1071470:CDS | 40.0% | |
| AAGAAAGAAAATCGCCATGC+CGG | + | chr7_2:68000392-68000411 | Msa1071470:CDS | 40.0% | |
| AAGTAAGCAGCAGAATCAAC+CGG | - | chr7_2:68000414-68000433 | None:intergenic | 40.0% | |
| GCATCAAGTAATGTACGGTA+AGG | - | chr7_2:68000558-68000577 | None:intergenic | 40.0% | |
| TACCGTACATTACTTGATGC+TGG | + | chr7_2:68000558-68000577 | Msa1071470:CDS | 40.0% | |
| CTCAAACTCCAAACCCAAAA+TGG | - | chr7_2:68000603-68000622 | None:intergenic | 40.0% | |
| TTTACTGCAGTGGTTGTTGT+TGG | + | chr7_2:68000670-68000689 | Msa1071470:CDS | 40.0% | |
| ! | AGTGGTTGTTGTTGGAACAA+CGG | + | chr7_2:68000678-68000697 | Msa1071470:CDS | 40.0% |
| GCTCTATAAGCGCATGTATT+TGG | - | chr7_2:68000770-68000789 | None:intergenic | 40.0% | |
| ! | CATGCGCTTATAGAGCATTA+TGG | + | chr7_2:68000774-68000793 | Msa1071470:CDS | 40.0% |
| GAAGGCAAGTAAATTTCCTC+TGG | - | chr7_2:68000819-68000838 | None:intergenic | 40.0% | |
| ACTTGCCTTCTTCTGTTGAT+TGG | + | chr7_2:68000829-68000848 | Msa1071470:CDS | 40.0% | |
| AACACCCTTTCGGTACAAAA+GGG | - | chr7_2:68000871-68000890 | None:intergenic | 40.0% | |
| AAACACCCTTTCGGTACAAA+AGG | - | chr7_2:68000872-68000891 | None:intergenic | 40.0% | |
| ! | GAAGGTGGATCAAATTTTCC+CGG | + | chr7_2:68000912-68000931 | Msa1071470:CDS | 40.0% |
| GTTCATGTGAAACCAGCATT+TGG | + | chr7_2:68001035-68001054 | Msa1071470:CDS | 40.0% | |
| AGAGTAGAAGGTCCATTGAA+AGG | - | chr7_2:68001098-68001117 | None:intergenic | 40.0% | |
| GGACCTTCTACTCTCAAATT+TGG | + | chr7_2:68001104-68001123 | Msa1071470:CDS | 40.0% | |
| GTAACTTCACTGGAGAACTT+TGG | + | chr7_2:68001198-68001217 | Msa1071470:CDS | 40.0% | |
| GTATATAGGTTCCAGGATGA+GGG | - | chr7_2:68001337-68001356 | None:intergenic | 40.0% | |
| TGTATATAGGTTCCAGGATG+AGG | - | chr7_2:68001338-68001357 | None:intergenic | 40.0% | |
| CATCCTGGAACCTATATACA+AGG | + | chr7_2:68001338-68001357 | Msa1071470:CDS | 40.0% | |
| GATCCTTGTATATAGGTTCC+AGG | - | chr7_2:68001344-68001363 | None:intergenic | 40.0% | |
| GGATCGTCAAAACTTGGAAT+TGG | + | chr7_2:68001359-68001378 | Msa1071470:CDS | 40.0% | |
| ! | TAGACGTAGTAATTTGCGTG+TGG | + | chr7_2:68001397-68001416 | Msa1071470:CDS | 40.0% |
| CTCATATACTGCAACCATTG+AGG | - | chr7_2:68001482-68001501 | None:intergenic | 40.0% | |
| GGTTGCAGTATATGAGACAA+TGG | + | chr7_2:68001486-68001505 | Msa1071470:CDS | 40.0% | |
| ! | TTTTTCTCTTTTGGCCCTGT+AGG | - | chr7_2:68001641-68001660 | None:intergenic | 40.0% |
| ! | ACTGGATTGGAGATGAAAGA+TGG | + | chr7_2:68001663-68001682 | Msa1071470:CDS | 40.0% |
| TCTGAGGAACCAAGTGTTAC+GGG | + | chr7_2:67998995-67999014 | Msa1071470:CDS | 45.0% | |
| AGCATATGGAAGAGAAGGTG+CGG | - | chr7_2:67999047-67999066 | None:intergenic | 45.0% | |
| AGCGAAGCATATGGAAGAGA+AGG | - | chr7_2:67999052-67999071 | None:intergenic | 45.0% | |
| ! | TGCATTTGGAGCGAAGCATA+TGG | - | chr7_2:67999061-67999080 | None:intergenic | 45.0% |
| ATGATCGGATGCATTGGGTT+TGG | - | chr7_2:67999099-67999118 | None:intergenic | 45.0% | |
| TCAACACTCCTCTTCCTCAA+TGG | + | chr7_2:67999150-67999169 | Msa1071470:CDS | 45.0% | |
| GTTATACCTTGAGGCCATTG+AGG | - | chr7_2:67999167-67999186 | None:intergenic | 45.0% | |
| AATGTTGTGTCTGACACGCA+TGG | - | chr7_2:67999238-67999257 | None:intergenic | 45.0% | |
| GTCTCTACAGTTGCATGCAA+AGG | - | chr7_2:67999554-67999573 | None:intergenic | 45.0% | |
| CTGTAGAGACTAATCGCTTG+AGG | + | chr7_2:67999564-67999583 | Msa1071470:intron | 45.0% | |
| AGACTAATCGCTTGAGGTAG+TGG | + | chr7_2:67999570-67999589 | Msa1071470:intron | 45.0% | |
| GACTAATCGCTTGAGGTAGT+GGG | + | chr7_2:67999571-67999590 | Msa1071470:intron | 45.0% | |
| AAAGCTCTCCCTCAAGACTA+TGG | + | chr7_2:67999598-67999617 | Msa1071470:intron | 45.0% | |
| ! | ACAGGACAGGATTTTGCTTC+TGG | + | chr7_2:68000075-68000094 | Msa1071470:intron | 45.0% |
| !! | GCTTCTGGAATTGTGAACCT+TGG | + | chr7_2:68000090-68000109 | Msa1071470:CDS | 45.0% |
| TTGGAACAGCAATGTGATGG+TGG | + | chr7_2:68000152-68000171 | Msa1071470:CDS | 45.0% | |
| CCAAGGATGTGAAATCCATC+TGG | - | chr7_2:68000219-68000238 | None:intergenic | 45.0% | |
| ! | CCAGATGGATTTCACATCCT+TGG | + | chr7_2:68000216-68000235 | Msa1071470:CDS | 45.0% |
| CCTAGCTACAAGCCTTTATG+GGG | + | chr7_2:68000252-68000271 | Msa1071470:CDS | 45.0% | |
| TTGTAACCTTCAGGAGGTTG+AGG | - | chr7_2:68000444-68000463 | None:intergenic | 45.0% | |
| TCAACCTCCTGAAGGTTACA+AGG | + | chr7_2:68000443-68000462 | Msa1071470:CDS | 45.0% | |
| TTACAAGGCTCTTGGCTACT+TGG | + | chr7_2:68000458-68000477 | Msa1071470:CDS | 45.0% | |
| ACCGTGGTATGTTAGGGAAA+GGG | + | chr7_2:68000631-68000650 | Msa1071470:CDS | 45.0% | |
| TTAGGGAAAGGGGTTTCAGT+AGG | + | chr7_2:68000642-68000661 | Msa1071470:CDS | 45.0% | |
| TAGGGAAAGGGGTTTCAGTA+GGG | + | chr7_2:68000643-68000662 | Msa1071470:CDS | 45.0% | |
| ! | GTAGGGACTTTTTACTGCAG+TGG | + | chr7_2:68000660-68000679 | Msa1071470:CDS | 45.0% |
| GCATGTATTTGGTCGATCCA+CGG | - | chr7_2:68000759-68000778 | None:intergenic | 45.0% | |
| !! | TTGTACCGAAAGGGTGTTTC+TGG | + | chr7_2:68000873-68000892 | Msa1071470:CDS | 45.0% |
| CATGTGAAACCAGCATTTGG+TGG | + | chr7_2:68001038-68001057 | Msa1071470:CDS | 45.0% | |
| GTGAAAGTTCCACCAAATGC+TGG | - | chr7_2:68001050-68001069 | None:intergenic | 45.0% | |
| TATTACTCACAGCACAGTGG+TGG | + | chr7_2:68001227-68001246 | Msa1071470:CDS | 45.0% | |
| ACAGCACAGTGGTGGTAAAT+GGG | + | chr7_2:68001235-68001254 | Msa1071470:CDS | 45.0% | |
| AAGCTTCCTGTGGAACTGTA+TGG | + | chr7_2:68001605-68001624 | Msa1071470:CDS | 45.0% | |
| ! | ATATGGAAGAGAAGGTGCGG+AGG | - | chr7_2:67999044-67999063 | None:intergenic | 50.0% |
| TCGGATGCATTGGGTTTGGA+AGG | - | chr7_2:67999095-67999114 | None:intergenic | 50.0% | |
| !! | TAATCGCTTGAGGTAGTGGG+TGG | + | chr7_2:67999574-67999593 | Msa1071470:intron | 50.0% |
| !! | AAACCAGTGGGAGTACCAGA+TGG | + | chr7_2:68000201-68000220 | Msa1071470:CDS | 50.0% |
| AATCCATCTGGTACTCCCAC+TGG | - | chr7_2:68000207-68000226 | None:intergenic | 50.0% | |
| CCCCATAAAGGCTTGTAGCT+AGG | - | chr7_2:68000255-68000274 | None:intergenic | 50.0% | |
| TCAAGAGGGTTCTCCAAAGC+TGG | - | chr7_2:68000342-68000361 | None:intergenic | 50.0% | |
| ! | AGAGCCTTGTAACCTTCAGG+AGG | - | chr7_2:68000450-68000469 | None:intergenic | 50.0% |
| ! | CCAAGAGCCTTGTAACCTTC+AGG | - | chr7_2:68000453-68000472 | None:intergenic | 50.0% |
| CCTGAAGGTTACAAGGCTCT+TGG | + | chr7_2:68000450-68000469 | Msa1071470:CDS | 50.0% | |
| CCTAACATACCACGGTCACA+GGG | - | chr7_2:68000627-68000646 | None:intergenic | 50.0% | |
| CCTGTGACCGTGGTATGTTA+GGG | + | chr7_2:68000625-68000644 | Msa1071470:CDS | 50.0% | |
| GACCGTGGTATGTTAGGGAA+AGG | + | chr7_2:68000630-68000649 | Msa1071470:CDS | 50.0% | |
| CCCCTTTCCCTAACATACCA+CGG | - | chr7_2:68000635-68000654 | None:intergenic | 50.0% | |
| CCGTGGTATGTTAGGGAAAG+GGG | + | chr7_2:68000632-68000651 | Msa1071470:CDS | 50.0% | |
| ! | TGGAGCCCTTTTGTACCGAA+AGG | + | chr7_2:68000863-68000882 | Msa1071470:CDS | 50.0% |
| ! | GGAGCCCTTTTGTACCGAAA+GGG | + | chr7_2:68000864-68000883 | Msa1071470:CDS | 50.0% |
| !! | TACCGAAAGGGTGTTTCTGG+AGG | + | chr7_2:68000876-68000895 | Msa1071470:CDS | 50.0% |
| ! | GGTGGATCAAATTTTCCCGG+TGG | + | chr7_2:68000915-68000934 | Msa1071470:CDS | 50.0% |
| ! | GGATCAAATTTTCCCGGTGG+AGG | + | chr7_2:68000918-68000937 | Msa1071470:CDS | 50.0% |
| CCATCATTTGTTCCTCCACC+GGG | - | chr7_2:68000933-68000952 | None:intergenic | 50.0% | |
| CCCATCATTTGTTCCTCCAC+CGG | - | chr7_2:68000934-68000953 | None:intergenic | 50.0% | |
| CCGGTGGAGGAACAAATGAT+GGG | + | chr7_2:68000931-68000950 | Msa1071470:CDS | 50.0% | |
| CGGTGGAGGAACAAATGATG+GGG | + | chr7_2:68000932-68000951 | Msa1071470:CDS | 50.0% | |
| CACAGCACAGTGGTGGTAAA+TGG | + | chr7_2:68001234-68001253 | Msa1071470:CDS | 50.0% | |
| CATGCAAGTTACCCTCATCC+TGG | + | chr7_2:68001323-68001342 | Msa1071470:CDS | 50.0% | |
| TCCTGTGGAACTGTATGGTG+AGG | + | chr7_2:68001610-68001629 | Msa1071470:CDS | 50.0% | |
| TCCTCACCATACAGTTCCAC+AGG | - | chr7_2:68001614-68001633 | None:intergenic | 50.0% | |
| GTGGAACTGTATGGTGAGGA+AGG | + | chr7_2:68001614-68001633 | Msa1071470:CDS | 50.0% | |
| TATGGTGAGGAAGGTCCTAC+AGG | + | chr7_2:68001623-68001642 | Msa1071470:CDS | 50.0% | |
| ATGGTGAGGAAGGTCCTACA+GGG | + | chr7_2:68001624-68001643 | Msa1071470:CDS | 50.0% | |
| CCTTGAGGCCATTGAGGAAG+AGG | - | chr7_2:67999161-67999180 | None:intergenic | 55.0% | |
| CCTCTTCCTCAATGGCCTCA+AGG | + | chr7_2:67999158-67999177 | Msa1071470:CDS | 55.0% | |
| AGCAGCAGAATCAACCGGCA+TGG | - | chr7_2:68000409-68000428 | None:intergenic | 55.0% | |
| TGGCTACCTCAACCTCCTGA+AGG | + | chr7_2:68000435-68000454 | Msa1071470:CDS | 55.0% | |
| ! | AGTTTGAGACCCTGTGACCG+TGG | + | chr7_2:68000615-68000634 | Msa1071470:CDS | 55.0% |
| CCCTGTGACCGTGGTATGTT+AGG | + | chr7_2:68000624-68000643 | Msa1071470:CDS | 55.0% | |
| CCCTAACATACCACGGTCAC+AGG | - | chr7_2:68000628-68000647 | None:intergenic | 55.0% | |
| ! | CACGGCATTGCTGATAGCGT+TGG | - | chr7_2:68000741-68000760 | None:intergenic | 55.0% |
| CAACGCTATCAGCAATGCCG+TGG | + | chr7_2:68000739-68000758 | Msa1071470:CDS | 55.0% | |
| CGCCTCCAGAAACACCCTTT+CGG | - | chr7_2:68000881-68000900 | None:intergenic | 55.0% | |
| GGAGGCGAGACTATCGATGA+AGG | + | chr7_2:68000894-68000913 | Msa1071470:CDS | 55.0% | |
| GGCGAGACTATCGATGAAGG+TGG | + | chr7_2:68000897-68000916 | Msa1071470:CDS | 55.0% | |
| CCCGGTGGAGGAACAAATGA+TGG | + | chr7_2:68000930-68000949 | Msa1071470:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 67998868 | 68001822 | 67998868 | ID=Msa1071470;Name=Msa1071470 |
| chr7_2 | mRNA | 67998868 | 68001822 | 67998868 | ID=Msa1071470-mRNA-1;Parent=Msa1071470;Name=Msa1071470-mRNA-1;_AED=0.01;_eAED=0.01;_QI=95|1|1|1|1|1|2|134|608 |
| chr7_2 | exon | 67998868 | 67999179 | 67998868 | ID=Msa1071470-mRNA-1:exon:14827;Parent=Msa1071470-mRNA-1 |
| chr7_2 | exon | 68000079 | 68001822 | 68000079 | ID=Msa1071470-mRNA-1:exon:14828;Parent=Msa1071470-mRNA-1 |
| chr7_2 | five_prime_UTR | 67998868 | 67998962 | 67998868 | ID=Msa1071470-mRNA-1:five_prime_utr;Parent=Msa1071470-mRNA-1 |
| chr7_2 | CDS | 67998963 | 67999179 | 67998963 | ID=Msa1071470-mRNA-1:cds;Parent=Msa1071470-mRNA-1 |
| chr7_2 | CDS | 68000079 | 68001688 | 68000079 | ID=Msa1071470-mRNA-1:cds;Parent=Msa1071470-mRNA-1 |
| chr7_2 | three_prime_UTR | 68001689 | 68001822 | 68001689 | ID=Msa1071470-mRNA-1:three_prime_utr;Parent=Msa1071470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
