Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071630 | XP_003624887.1 | 93.151 | 511 | 11 | 1 | 1 | 511 | 3 | 489 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071630 | G7L4U1 | 93.151 | 511 | 11 | 1 | 1 | 511 | 3 | 489 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090770 | Msa1071630 | 0.804595 | 2.003057e-49 | -8.615850e-47 |
| Msa1071630 | Msa1117520 | 0.860034 | 2.736094e-63 | -8.615850e-47 |
| Msa1071630 | Msa1161220 | 0.853413 | 2.429288e-61 | -8.615850e-47 |
| Msa1071630 | Msa1426340 | 0.943397 | 1.294460e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071630 | MtrunA17_Chr7g0255441 | 93.151 | 511 | 11 | 1 | 1 | 511 | 3 | 489 | 0.0 | 939 |
| Msa1071630 | MtrunA17_Chr2g0297561 | 37.202 | 336 | 176 | 11 | 2 | 334 | 5 | 308 | 1.29e-52 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071630 | AT3G56590.1 | 49.405 | 336 | 135 | 6 | 4 | 332 | 7 | 314 | 1.22e-89 | 283 |
| Msa1071630 | AT3G56590.2 | 49.405 | 336 | 135 | 6 | 4 | 332 | 7 | 314 | 4.70e-89 | 282 |
| Msa1071630 | AT3G10810.1 | 44.513 | 483 | 203 | 12 | 24 | 495 | 27 | 455 | 1.16e-80 | 260 |
| Msa1071630 | AT3G10810.2 | 44.513 | 483 | 203 | 12 | 24 | 495 | 27 | 455 | 1.19e-80 | 260 |
| Msa1071630 | AT1G10790.1 | 33.234 | 337 | 195 | 8 | 16 | 348 | 21 | 331 | 9.85e-36 | 136 |
Find 143 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGATTGTATTTGATAAA+TGG | 0.161202 | 7_2:-68407579 | None:intergenic |
| TTTGAAGTGTTGAAATTTAA+AGG | 0.171687 | 7_2:+68407476 | Msa1071630:CDS |
| GGCTTGAATAACACTGAATT+TGG | 0.215115 | 7_2:+68408171 | Msa1071630:CDS |
| ATCTTGCAGCACTCCCTTAA+TGG | 0.250955 | 7_2:+68408222 | Msa1071630:CDS |
| TCTGCAGCCGGTTCCCTCTT+AGG | 0.263612 | 7_2:-68408708 | None:intergenic |
| GGCCATTATCACTGCCATTA+AGG | 0.275121 | 7_2:-68408236 | None:intergenic |
| TTGTCTTTAGACCCCTTACC+TGG | 0.290967 | 7_2:+68407293 | Msa1071630:CDS |
| TCCCTTAATGGCAGTGATAA+TGG | 0.304610 | 7_2:+68408234 | Msa1071630:CDS |
| TGTTCCTCTCTGCTTTGTTT+TGG | 0.304619 | 7_2:+68405132 | Msa1071630:CDS |
| TTGGTAATCCCTAAATTTGT+AGG | 0.307525 | 7_2:-68406556 | None:intergenic |
| TTTGATTGTATTTGATAAAT+GGG | 0.307902 | 7_2:-68407578 | None:intergenic |
| ATGGCAGGCAAAGATATTTC+CGG | 0.322581 | 7_2:-68407365 | None:intergenic |
| TACGATAATTCCAAATATAA+AGG | 0.345382 | 7_2:+68405185 | Msa1071630:CDS |
| AAGATCATTATTTACGTCCT+TGG | 0.367072 | 7_2:+68407397 | Msa1071630:CDS |
| GTCTTGTTTGGCCCAGGTAA+GGG | 0.369195 | 7_2:-68407305 | None:intergenic |
| GCAGCAGGAGGGCCAACTTC+AGG | 0.372253 | 7_2:-68408426 | None:intergenic |
| TGTCTTGTTTGGCCCAGGTA+AGG | 0.388951 | 7_2:-68407306 | None:intergenic |
| GATGGTGATGATGGTGGTGG+TGG | 0.389466 | 7_2:-68408323 | None:intergenic |
| AGCATCTACCGTTGAACCTT+CGG | 0.392513 | 7_2:-68408046 | None:intergenic |
| GGTGATGATGGTGGTGGTGG+TGG | 0.392715 | 7_2:-68408320 | None:intergenic |
| GCCATTATCACTGCCATTAA+GGG | 0.401536 | 7_2:-68408235 | None:intergenic |
| TAATGATCTTATCAAACTAA+TGG | 0.408481 | 7_2:-68407384 | None:intergenic |
| GTTGCACCCTCTCCAGGTTT+AGG | 0.414542 | 7_2:-68408399 | None:intergenic |
| CTTACGAGTAAGAACATGTT+TGG | 0.414821 | 7_2:-68406575 | None:intergenic |
| TCCTCTGTTCTACTTGCGGT+TGG | 0.418884 | 7_2:+68408084 | Msa1071630:CDS |
| TTAGGCGCAGATGCAGGTAT+AGG | 0.428232 | 7_2:-68408381 | None:intergenic |
| TGGCAGGTGTTGTTCTTCTT+CGG | 0.429039 | 7_2:-68404988 | None:intergenic |
| GGCGGAGTTGCACCCTCTCC+AGG | 0.431156 | 7_2:-68408405 | None:intergenic |
| CCTCTGTTCTACTTGCGGTT+GGG | 0.431465 | 7_2:+68408085 | Msa1071630:CDS |
| TGAATAACACTGAATTTGGT+AGG | 0.435607 | 7_2:+68408175 | Msa1071630:CDS |
| TGGCAGGCAAAGATATTTCC+GGG | 0.437842 | 7_2:-68407364 | None:intergenic |
| GCATGGGCAAAAGCAACATT+TGG | 0.437945 | 7_2:-68408675 | None:intergenic |
| CCTGCATCTGCGCCTAAACC+TGG | 0.445419 | 7_2:+68408387 | Msa1071630:CDS |
| GATTGTTGTGATCTACAAAA+GGG | 0.448387 | 7_2:-68405160 | None:intergenic |
| AAAACATAGGATAAAGCAAT+TGG | 0.451008 | 7_2:+68408119 | Msa1071630:CDS |
| CAGCCGGTTCCCTCTTAGGT+GGG | 0.451322 | 7_2:-68408704 | None:intergenic |
| CAGCTCACGTCATCCTTGTT+CGG | 0.451515 | 7_2:+68407440 | Msa1071630:CDS |
| GGAAAACTGTGTGGCAGTGC+TGG | 0.455955 | 7_2:-68406535 | None:intergenic |
| CTGACAAGTCAGCTAAAGTC+TGG | 0.458421 | 7_2:+68407611 | Msa1071630:CDS |
| TTATTCAAGCCAAGATTATG+AGG | 0.460053 | 7_2:-68408159 | None:intergenic |
| CCCTCCTGCTGCTACAGAAA+GGG | 0.462319 | 7_2:+68408437 | Msa1071630:CDS |
| GGTGCAGTTCTTCTCAGATT+CGG | 0.462637 | 7_2:+68405060 | Msa1071630:CDS |
| ACAGAGGATTGAATGGTAGT+AGG | 0.463534 | 7_2:-68408069 | None:intergenic |
| CTATGCTCAAATGGACAATC+AGG | 0.465437 | 7_2:-68408495 | None:intergenic |
| AGAGATTTGACAAACCTCAT+AGG | 0.465865 | 7_2:-68407648 | None:intergenic |
| TCTCAGATTCGGAAACTCCT+TGG | 0.465973 | 7_2:+68405071 | Msa1071630:CDS |
| GCAGGAGAAGGTGACCTCGC+TGG | 0.466298 | 7_2:-68408258 | None:intergenic |
| GCCACGTGGCGTAACATCTT+CGG | 0.469673 | 7_2:+68405007 | Msa1071630:CDS |
| CGAACAAGGATGACGTGAGC+TGG | 0.470456 | 7_2:-68407439 | None:intergenic |
| ATCATGGGACCTCATAATCT+TGG | 0.470519 | 7_2:+68408150 | Msa1071630:CDS |
| CAGGAGAAGGTGACCTCGCT+GGG | 0.474476 | 7_2:-68408257 | None:intergenic |
| CTGCTAGGTTGTTCTGCAGC+CGG | 0.476055 | 7_2:-68408720 | None:intergenic |
| AGATTGTTGTGATCTACAAA+AGG | 0.480787 | 7_2:-68405161 | None:intergenic |
| GGAGAATGAGGCACAGGAGC+AGG | 0.482291 | 7_2:-68408276 | None:intergenic |
| CAACCTAGCAGACAGTTTCA+TGG | 0.482306 | 7_2:+68408732 | Msa1071630:CDS |
| GCCCTTTCTGTAGCAGCAGG+AGG | 0.484718 | 7_2:-68408438 | None:intergenic |
| TGTGATGGTGATGGTGATGA+TGG | 0.491864 | 7_2:-68408332 | None:intergenic |
| GGATTCCTTCATCAAAACAT+AGG | 0.492387 | 7_2:+68408106 | Msa1071630:CDS |
| TGAGAATGATGTTCAATGCT+AGG | 0.492577 | 7_2:-68408573 | None:intergenic |
| GACCTTTGTCTATGCTCAAA+TGG | 0.492585 | 7_2:-68408504 | None:intergenic |
| GGTGGTGATGATGGTGATGG+TGG | 0.493318 | 7_2:-68408302 | None:intergenic |
| GGTGCAACTCCGCCTGAAGT+TGG | 0.497452 | 7_2:+68408414 | Msa1071630:CDS |
| GCAGCCGGTTCCCTCTTAGG+TGG | 0.498899 | 7_2:-68408705 | None:intergenic |
| GCCCTCCTGCTGCTACAGAA+AGG | 0.502793 | 7_2:+68408436 | Msa1071630:CDS |
| AGCCGGTTCCCTCTTAGGTG+GGG | 0.507911 | 7_2:-68408703 | None:intergenic |
| ATTTCCGGGTGTCCACCATC+AGG | 0.508066 | 7_2:-68407350 | None:intergenic |
| GCAATTGGCACAAACCATCA+TGG | 0.508845 | 7_2:+68408134 | Msa1071630:CDS |
| ATTACGTCTGACATCCTATG+AGG | 0.515393 | 7_2:+68407634 | Msa1071630:CDS |
| GCCGGTTCCCTCTTAGGTGG+GGG | 0.515542 | 7_2:-68408702 | None:intergenic |
| GGTGCCCTTTCTGTAGCAGC+AGG | 0.515906 | 7_2:-68408441 | None:intergenic |
| TCTTGTTTGGCCCAGGTAAG+GGG | 0.516302 | 7_2:-68407304 | None:intergenic |
| AATTTGTTATCTTCTAGCAC+AGG | 0.520170 | 7_2:-68407119 | None:intergenic |
| GAGAATGATGTTCAATGCTA+GGG | 0.520653 | 7_2:-68408572 | None:intergenic |
| TCAATCCTCTGTTCTACTTG+CGG | 0.521044 | 7_2:+68408080 | Msa1071630:CDS |
| GGTGGTGGTGATGATGGTGA+TGG | 0.523129 | 7_2:-68408305 | None:intergenic |
| GGTGATGGTGATGATGGTGG+TGG | 0.523958 | 7_2:-68408326 | None:intergenic |
| ATCGAATTCCGAAGGTTCAA+CGG | 0.524363 | 7_2:+68408038 | Msa1071630:CDS |
| GCAGGTATAGGAGAAGTTGC+AGG | 0.530037 | 7_2:-68408369 | None:intergenic |
| CCAGGTTTAGGCGCAGATGC+AGG | 0.533896 | 7_2:-68408387 | None:intergenic |
| CAAGACAAAAGTGGTATTTG+CGG | 0.534592 | 7_2:+68407322 | Msa1071630:CDS |
| TTGAGCATAGACAAAGGTCT+AGG | 0.536480 | 7_2:+68408508 | Msa1071630:CDS |
| GATCTTATCAAACTAATGGC+AGG | 0.537561 | 7_2:-68407380 | None:intergenic |
| CTGAATGAGATGCATGTGTA+GGG | 0.538600 | 7_2:-68408632 | None:intergenic |
| TGAGGCACAGGAGCAGGAGA+AGG | 0.539362 | 7_2:-68408270 | None:intergenic |
| AGGTGTACTTGAGTAGCGGC+AGG | 0.539689 | 7_2:-68407179 | None:intergenic |
| CGATCCTGATGGTGGACACC+CGG | 0.542807 | 7_2:+68407346 | Msa1071630:CDS |
| GAATAACACTGAATTTGGTA+GGG | 0.544457 | 7_2:+68408176 | Msa1071630:CDS |
| CCCTTTCTGTAGCAGCAGGA+GGG | 0.545573 | 7_2:-68408437 | None:intergenic |
| AAGATGTTACGCCACGTGGC+AGG | 0.552304 | 7_2:-68405004 | None:intergenic |
| TGATGATGGTGATGGTGGTG+TGG | 0.559292 | 7_2:-68408297 | None:intergenic |
| AACCTAGCAGACAGTTTCAT+GGG | 0.559532 | 7_2:+68408733 | Msa1071630:CDS |
| CTTGTTTGCACTGTCTGCAG+AGG | 0.566318 | 7_2:-68407533 | None:intergenic |
| AAGTAGAACAGAGGATTGAA+TGG | 0.566930 | 7_2:-68408076 | None:intergenic |
| TGTCTTTAGACCCCTTACCT+GGG | 0.572432 | 7_2:+68407294 | Msa1071630:CDS |
| CGAGAATGCATCTGAAACCA+AGG | 0.573103 | 7_2:-68405088 | None:intergenic |
| TTCGGATCCACCACAAAACA+CGG | 0.579307 | 7_2:+68405025 | Msa1071630:CDS |
| CAAAGGTCTAGGCGTAGTGG+TGG | 0.580570 | 7_2:+68408519 | Msa1071630:CDS |
| GATGGTGATGGTGATGATGG+TGG | 0.581107 | 7_2:-68408329 | None:intergenic |
| AAGATTATGAGGTCCCATGA+TGG | 0.582626 | 7_2:-68408148 | None:intergenic |
| GAAGTGTTGAAATTTAAAGG+AGG | 0.585415 | 7_2:+68407479 | Msa1071630:CDS |
| CAATTGGCACAAACCATCAT+GGG | 0.587612 | 7_2:+68408135 | Msa1071630:CDS |
| ATTAAGGGAGTGCTGCAAGA+TGG | 0.595899 | 7_2:-68408220 | None:intergenic |
| GCAGGAGGGCCAACTTCAGG+CGG | 0.599889 | 7_2:-68408423 | None:intergenic |
| GTCATCTTATCGAATTCCGA+AGG | 0.601739 | 7_2:+68408030 | Msa1071630:CDS |
| GATGAGAATTGTGATGGTGA+TGG | 0.605321 | 7_2:-68408341 | None:intergenic |
| TTTGCGGTCGATCCTGATGG+TGG | 0.606445 | 7_2:+68407338 | Msa1071630:CDS |
| ACGTGAGCTGGAGAACTGAT+TGG | 0.613893 | 7_2:-68407427 | None:intergenic |
| TCTGCGCCTAAACCTGGAGA+GGG | 0.619553 | 7_2:+68408393 | Msa1071630:CDS |
| TCAATGCTAGGGGCAACAGC+AGG | 0.619563 | 7_2:-68408561 | None:intergenic |
| TGATGGTGGTGTGGAGAATG+AGG | 0.622179 | 7_2:-68408288 | None:intergenic |
| AGCCCATGAAACTGTCTGCT+AGG | 0.623594 | 7_2:-68408735 | None:intergenic |
| AGATAACAAATTGCAGCTCG+AGG | 0.623638 | 7_2:+68407130 | Msa1071630:CDS |
| GAGTTAGATGAGAATTGTGA+TGG | 0.623883 | 7_2:-68408347 | None:intergenic |
| TGGGCCAAACAAGACAAAAG+TGG | 0.624406 | 7_2:+68407313 | Msa1071630:CDS |
| ATTTGTTATCTTCTAGCACA+GGG | 0.624537 | 7_2:-68407118 | None:intergenic |
| AAAGTGGGGATCTCCGAACA+AGG | 0.624948 | 7_2:-68407453 | None:intergenic |
| TGGTGTGGAGAATGAGGCAC+AGG | 0.625178 | 7_2:-68408282 | None:intergenic |
| ATCTGCGCCTAAACCTGGAG+AGG | 0.627865 | 7_2:+68408392 | Msa1071630:CDS |
| TATTTCATCACCAAAACCAC+AGG | 0.630295 | 7_2:+68408602 | Msa1071630:CDS |
| TTTGGCAAAGGACTCAAAGC+AGG | 0.632407 | 7_2:-68408657 | None:intergenic |
| GTATTTGCGGTCGATCCTGA+TGG | 0.632702 | 7_2:+68407335 | Msa1071630:CDS |
| GCAAAAGCAACATTTGGCAA+AGG | 0.636891 | 7_2:-68408669 | None:intergenic |
| AGACAAAGGTCTAGGCGTAG+TGG | 0.638068 | 7_2:+68408516 | Msa1071630:CDS |
| TCCGAAGATGTTACGCCACG+TGG | 0.638338 | 7_2:-68405008 | None:intergenic |
| ACTGAATGAGATGCATGTGT+AGG | 0.638798 | 7_2:-68408633 | None:intergenic |
| AACTGATTGGCGTATTACCA+AGG | 0.644789 | 7_2:-68407414 | None:intergenic |
| ATTGTTGTGATCTACAAAAG+GGG | 0.657816 | 7_2:-68405159 | None:intergenic |
| TGCTCAAATGGACAATCAGG+AGG | 0.660607 | 7_2:-68408492 | None:intergenic |
| AGAGGAAATGCATTCTGTTG+TGG | 0.663252 | 7_2:-68407515 | None:intergenic |
| AGAGAGGTGTACTTGAGTAG+CGG | 0.664531 | 7_2:-68407183 | None:intergenic |
| AAAGGTCTAGGCGTAGTGGT+GGG | 0.665741 | 7_2:+68408520 | Msa1071630:CDS |
| AGAATGATGTTCAATGCTAG+GGG | 0.670709 | 7_2:-68408571 | None:intergenic |
| GAATGAGATGCATGTGTAGG+GGG | 0.673662 | 7_2:-68408630 | None:intergenic |
| TTGTTGTGATCTACAAAAGG+GGG | 0.679856 | 7_2:-68405158 | None:intergenic |
| GTCCATTTGAGCATAGACAA+AGG | 0.679916 | 7_2:+68408502 | Msa1071630:CDS |
| TATCATTAAGCATACTCACA+TGG | 0.688242 | 7_2:-68408768 | None:intergenic |
| CCCAACCGCAAGTAGAACAG+AGG | 0.688429 | 7_2:-68408085 | None:intergenic |
| AAAACACGGAAACACAGTGT+CGG | 0.696137 | 7_2:+68405039 | Msa1071630:CDS |
| TGAATGAGATGCATGTGTAG+GGG | 0.709910 | 7_2:-68408631 | None:intergenic |
| GAAGAACAACACCTGCCACG+TGG | 0.732325 | 7_2:+68404993 | Msa1071630:CDS |
| GTAACCAAAACAAAGCAGAG+AGG | 0.763212 | 7_2:-68405136 | None:intergenic |
| GCAGTGATAATGGCCCAGCG+AGG | 0.774394 | 7_2:+68408244 | Msa1071630:CDS |
| AAATTTGTAGGAAAACTGTG+TGG | 0.783600 | 7_2:-68406544 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAGTTATATTTAATAATT+GGG | + | chr7_2:68405467-68405486 | Msa1071630:intron | 10.0% |
| !!! | GTATTTAAAATTTTAATGAT+TGG | + | chr7_2:68405489-68405508 | Msa1071630:intron | 10.0% |
| !!! | TGTATTTTTTTAAAGAAAAA+AGG | - | chr7_2:68407263-68407282 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTTAAAAAAATAC+AGG | + | chr7_2:68407262-68407281 | Msa1071630:intron | 10.0% |
| !! | AAAAAATTCACCTTTATATT+TGG | - | chr7_2:68405198-68405217 | None:intergenic | 15.0% |
| !!! | GAAAAAAGTAATAAATTTTG+TGG | + | chr7_2:68405366-68405385 | Msa1071630:intron | 15.0% |
| !!! | TGGTTTTTTGTAATTTTTTT+TGG | + | chr7_2:68405386-68405405 | Msa1071630:intron | 15.0% |
| !! | CTGAAGTTATATTTAATAAT+TGG | + | chr7_2:68405466-68405485 | Msa1071630:intron | 15.0% |
| !! | TATTAAGTATTTAAGCAATT+GGG | - | chr7_2:68406161-68406180 | None:intergenic | 15.0% |
| !! | ATATTAAGTATTTAAGCAAT+TGG | - | chr7_2:68406162-68406181 | None:intergenic | 15.0% |
| !! | CTTAAATACTTAATATCAAT+TGG | + | chr7_2:68406166-68406185 | Msa1071630:intron | 15.0% |
| !! | ATAAATAAAATGAGACATAT+AGG | - | chr7_2:68406888-68406907 | None:intergenic | 15.0% |
| !! | TTTGATTGTATTTGATAAAT+GGG | - | chr7_2:68407581-68407600 | None:intergenic | 15.0% |
| !! | ATTTGATTGTATTTGATAAA+TGG | - | chr7_2:68407582-68407601 | None:intergenic | 15.0% |
| !! | TACGATAATTCCAAATATAA+AGG | + | chr7_2:68405185-68405204 | Msa1071630:CDS | 20.0% |
| !!! | AAAGGTGAATTTTTTTTTGT+TGG | + | chr7_2:68405203-68405222 | Msa1071630:intron | 20.0% |
| !!! | TTTTTTTTTGTTGGATTTGT+CGG | + | chr7_2:68405212-68405231 | Msa1071630:intron | 20.0% |
| !! | TGTTTATTAGCTAATTAAAG+AGG | + | chr7_2:68405540-68405559 | Msa1071630:intron | 20.0% |
| !!! | CTTTATACCTATTTTTAGTA+AGG | + | chr7_2:68405622-68405641 | Msa1071630:intron | 20.0% |
| !! | ATCATAACCTTACTAAAAAT+AGG | - | chr7_2:68405632-68405651 | None:intergenic | 20.0% |
| !!! | TGTACTTTTGAAAATTGTTT+TGG | + | chr7_2:68405663-68405682 | Msa1071630:intron | 20.0% |
| !!! | GTACTTTTGAAAATTGTTTT+GGG | + | chr7_2:68405664-68405683 | Msa1071630:intron | 20.0% |
| !!! | TACTTTTGAAAATTGTTTTG+GGG | + | chr7_2:68405665-68405684 | Msa1071630:intron | 20.0% |
| !! | ATTAAGTATTTAAGCAATTG+GGG | - | chr7_2:68406160-68406179 | None:intergenic | 20.0% |
| !!! | TTAAAAGAGTTTGATTTTGT+CGG | - | chr7_2:68406996-68407015 | None:intergenic | 20.0% |
| !!! | GATAATTTTAATAACTTTGC+AGG | + | chr7_2:68407056-68407075 | Msa1071630:intron | 20.0% |
| !!! | AAGCTTTTTTGTTTATAAGT+CGG | + | chr7_2:68407094-68407113 | Msa1071630:CDS | 20.0% |
| !! | TAATGATCTTATCAAACTAA+TGG | - | chr7_2:68407387-68407406 | None:intergenic | 20.0% |
| !!! | TTTGAAGTGTTGAAATTTAA+AGG | + | chr7_2:68407476-68407495 | Msa1071630:CDS | 20.0% |
| !!! | CTTTTTTAATATGTGTGAAA+TGG | - | chr7_2:68407816-68407835 | None:intergenic | 20.0% |
| !!! | TCTGATAACATTTTAATCTT+AGG | + | chr7_2:68407955-68407974 | Msa1071630:intron | 20.0% |
| !!! | ATATAGATCTGTTTCTGTTT+TGG | + | chr7_2:68405254-68405273 | Msa1071630:intron | 25.0% |
| !!! | TATAGATCTGTTTCTGTTTT+GGG | + | chr7_2:68405255-68405274 | Msa1071630:intron | 25.0% |
| !!! | AAAGAGGTAAACTTGTTTTT+CGG | + | chr7_2:68405556-68405575 | Msa1071630:intron | 25.0% |
| ! | ACAATGTTATTCAAAATCAG+TGG | + | chr7_2:68405764-68405783 | Msa1071630:intron | 25.0% |
| ! | TAAGACGTTAAAATCAATCT+TGG | + | chr7_2:68405808-68405827 | Msa1071630:intron | 25.0% |
| ! | GGAAAACTAATTCTATTCAT+AGG | - | chr7_2:68405875-68405894 | None:intergenic | 25.0% |
| ! | ACACAAATGACAATATTTCA+GGG | - | chr7_2:68405971-68405990 | None:intergenic | 25.0% |
| ! | TAGAAAAATTGGTTGGATAT+CGG | + | chr7_2:68406017-68406036 | Msa1071630:intron | 25.0% |
| ! | ATATCAATTGGTATCAAAGT+TGG | + | chr7_2:68406178-68406197 | Msa1071630:intron | 25.0% |
| !! | ACAGTTTTCCTACAAATTTA+GGG | + | chr7_2:68406548-68406567 | Msa1071630:CDS | 25.0% |
| ! | AAATGAAATAGCAATGTAAG+TGG | + | chr7_2:68406633-68406652 | Msa1071630:intron | 25.0% |
| ! | ATGCAAGATGCATATTATTA+AGG | - | chr7_2:68406768-68406787 | None:intergenic | 25.0% |
| !! | AGTAAGCTTTTAATAGACAA+AGG | - | chr7_2:68406841-68406860 | None:intergenic | 25.0% |
| ! | ATAGAACTTTAACACTACAA+TGG | - | chr7_2:68406925-68406944 | None:intergenic | 25.0% |
| ! | AAATTGAGATAGGACATTAA+GGG | - | chr7_2:68407220-68407239 | None:intergenic | 25.0% |
| ! | AAAATTGAGATAGGACATTA+AGG | - | chr7_2:68407221-68407240 | None:intergenic | 25.0% |
| ! | CAATATGTGAAAATTGAGAT+AGG | - | chr7_2:68407230-68407249 | None:intergenic | 25.0% |
| ! | TTTCAACACTTCAAAAAAGT+GGG | - | chr7_2:68407471-68407490 | None:intergenic | 25.0% |
| ! | ATTTCAACACTTCAAAAAAG+TGG | - | chr7_2:68407472-68407491 | None:intergenic | 25.0% |
| !!! | TTCTTTTCTTACTGTTTCTA+TGG | + | chr7_2:68407674-68407693 | Msa1071630:intron | 25.0% |
| ! | TATGTGTGAAATGGTTAAAT+AGG | - | chr7_2:68407807-68407826 | None:intergenic | 25.0% |
| ! | AATATACCACTTATTGTTGT+TGG | + | chr7_2:68407917-68407936 | Msa1071630:intron | 25.0% |
| !! | ATATACCACTTATTGTTGTT+GGG | + | chr7_2:68407918-68407937 | Msa1071630:intron | 25.0% |
| !!! | TTTATCCTATGTTTTGATGA+AGG | - | chr7_2:68408114-68408133 | None:intergenic | 25.0% |
| ! | AAAACATAGGATAAAGCAAT+TGG | + | chr7_2:68408119-68408138 | Msa1071630:CDS | 25.0% |
| ATTGTTGTGATCTACAAAAG+GGG | - | chr7_2:68405162-68405181 | None:intergenic | 30.0% | |
| GATTGTTGTGATCTACAAAA+GGG | - | chr7_2:68405163-68405182 | None:intergenic | 30.0% | |
| AGATTGTTGTGATCTACAAA+AGG | - | chr7_2:68405164-68405183 | None:intergenic | 30.0% | |
| TTGATTGTGTTAATTGTGTG+TGG | + | chr7_2:68405313-68405332 | Msa1071630:intron | 30.0% | |
| ! | ATTTTGTGATGCGCTTAATA+AGG | + | chr7_2:68405418-68405437 | Msa1071630:intron | 30.0% |
| ! | TTTTGTGATGCGCTTAATAA+GGG | + | chr7_2:68405419-68405438 | Msa1071630:intron | 30.0% |
| TTTGTGTCACACTGTAAAAT+AGG | - | chr7_2:68405896-68405915 | None:intergenic | 30.0% | |
| GACACAAATGACAATATTTC+AGG | - | chr7_2:68405972-68405991 | None:intergenic | 30.0% | |
| !! | ATTTTTCTAGAGAAAGCCTA+AGG | - | chr7_2:68406006-68406025 | None:intergenic | 30.0% |
| ! | TAGGCTTTCTCTAGAAAAAT+TGG | + | chr7_2:68406006-68406025 | Msa1071630:intron | 30.0% |
| ! | CTTTCTCTAGAAAAATTGGT+TGG | + | chr7_2:68406010-68406029 | Msa1071630:intron | 30.0% |
| TTAAAAGCAAGTTATCAAGG+GGG | - | chr7_2:68406402-68406421 | None:intergenic | 30.0% | |
| CTTAAAAGCAAGTTATCAAG+GGG | - | chr7_2:68406403-68406422 | None:intergenic | 30.0% | |
| CCTTAAAAGCAAGTTATCAA+GGG | - | chr7_2:68406404-68406423 | None:intergenic | 30.0% | |
| !!! | CCTTGATAACTTGCTTTTAA+GGG | + | chr7_2:68406402-68406421 | Msa1071630:intron | 30.0% |
| TGATAAGTATTCAAGCACTT+GGG | - | chr7_2:68406435-68406454 | None:intergenic | 30.0% | |
| AAATTTGTAGGAAAACTGTG+TGG | - | chr7_2:68406547-68406566 | None:intergenic | 30.0% | |
| ! | CACAGTTTTCCTACAAATTT+AGG | + | chr7_2:68406547-68406566 | Msa1071630:CDS | 30.0% |
| ! | TTGGTAATCCCTAAATTTGT+AGG | - | chr7_2:68406559-68406578 | None:intergenic | 30.0% |
| AAATAACAAAAGCTTAAGCG+AGG | + | chr7_2:68406610-68406629 | Msa1071630:intron | 30.0% | |
| CAATGTAAGTGGTGTAATAT+TGG | + | chr7_2:68406644-68406663 | Msa1071630:intron | 30.0% | |
| TGTAATATTGGATCATGGAA+AGG | + | chr7_2:68406656-68406675 | Msa1071630:intron | 30.0% | |
| ACAAGTGGCAAATAGAAATT+TGG | + | chr7_2:68406702-68406721 | Msa1071630:intron | 30.0% | |
| TTCAGTTTCAGCTTCAATAA+AGG | + | chr7_2:68406728-68406747 | Msa1071630:intron | 30.0% | |
| !! | TATTTGTTGATTTAGTGGTG+TGG | - | chr7_2:68406973-68406992 | None:intergenic | 30.0% |
| !! | ATTTGTTATCTTCTAGCACA+GGG | - | chr7_2:68407121-68407140 | None:intergenic | 30.0% |
| !! | AATTTGTTATCTTCTAGCAC+AGG | - | chr7_2:68407122-68407141 | None:intergenic | 30.0% |
| !! | AATACCACTTTTGTCTTGTT+TGG | - | chr7_2:68407320-68407339 | None:intergenic | 30.0% |
| AAGATCATTATTTACGTCCT+TGG | + | chr7_2:68407397-68407416 | Msa1071630:CDS | 30.0% | |
| TTCAACACTTCAAAAAAGTG+GGG | - | chr7_2:68407470-68407489 | None:intergenic | 30.0% | |
| !! | GAAGTGTTGAAATTTAAAGG+AGG | + | chr7_2:68407479-68407498 | Msa1071630:CDS | 30.0% |
| ATAGGTCGATTATTGTGAAT+TGG | - | chr7_2:68407789-68407808 | None:intergenic | 30.0% | |
| ATAAGTGGTATATTACGCAA+GGG | - | chr7_2:68407911-68407930 | None:intergenic | 30.0% | |
| AATAAGTGGTATATTACGCA+AGG | - | chr7_2:68407912-68407931 | None:intergenic | 30.0% | |
| !! | TTTTGATTGGGTTTATTGGT+TGG | + | chr7_2:68407992-68408011 | Msa1071630:intron | 30.0% |
| TTATTCAAGCCAAGATTATG+AGG | - | chr7_2:68408162-68408181 | None:intergenic | 30.0% | |
| TGAATAACACTGAATTTGGT+AGG | + | chr7_2:68408175-68408194 | Msa1071630:CDS | 30.0% | |
| GAATAACACTGAATTTGGTA+GGG | + | chr7_2:68408176-68408195 | Msa1071630:CDS | 30.0% | |
| TTGTTGTGATCTACAAAAGG+GGG | - | chr7_2:68405161-68405180 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTTGGATTTGTCGG+TGG | + | chr7_2:68405215-68405234 | Msa1071630:intron | 35.0% |
| ! | TGCTTGATGGAGTATTTAAG+TGG | + | chr7_2:68406131-68406150 | Msa1071630:intron | 35.0% |
| ! | AAAGTTGGTTGTTAGTAGCT+CGG | + | chr7_2:68406193-68406212 | Msa1071630:intron | 35.0% |
| ! | ACGCTTTGCTTAATCTTTTC+CGG | - | chr7_2:68406244-68406263 | None:intergenic | 35.0% |
| TAAAAGCAAGTTATCAAGGG+GGG | - | chr7_2:68406401-68406420 | None:intergenic | 35.0% | |
| !!! | CCCTTGATAACTTGCTTTTA+AGG | + | chr7_2:68406401-68406420 | Msa1071630:intron | 35.0% |
| CCCTTAAAAGCAAGTTATCA+AGG | - | chr7_2:68406405-68406424 | None:intergenic | 35.0% | |
| !!! | TGATAACTTGCTTTTAAGGG+AGG | + | chr7_2:68406405-68406424 | Msa1071630:intron | 35.0% |
| GATAAGTATTCAAGCACTTG+GGG | - | chr7_2:68406434-68406453 | None:intergenic | 35.0% | |
| CTGATAAGTATTCAAGCACT+TGG | - | chr7_2:68406436-68406455 | None:intergenic | 35.0% | |
| CTAATAACAATGAGAGCTAG+CGG | - | chr7_2:68406501-68406520 | None:intergenic | 35.0% | |
| CTTACGAGTAAGAACATGTT+TGG | - | chr7_2:68406578-68406597 | None:intergenic | 35.0% | |
| AGTGGTGTAATATTGGATCA+TGG | + | chr7_2:68406651-68406670 | Msa1071630:intron | 35.0% | |
| TGAAGTATAATGCTATGCAG+AGG | - | chr7_2:68406795-68406814 | None:intergenic | 35.0% | |
| !! | GTCGGTATTTGTTGATTTAG+TGG | - | chr7_2:68406978-68406997 | None:intergenic | 35.0% |
| AAGGGAAACTATTAAGAGAG+AGG | - | chr7_2:68407202-68407221 | None:intergenic | 35.0% | |
| CAAGACAAAAGTGGTATTTG+CGG | + | chr7_2:68407322-68407341 | Msa1071630:CDS | 35.0% | |
| GATCTTATCAAACTAATGGC+AGG | - | chr7_2:68407383-68407402 | None:intergenic | 35.0% | |
| AGAGATTTGACAAACCTCAT+AGG | - | chr7_2:68407651-68407670 | None:intergenic | 35.0% | |
| !!! | TATGCTATGCTGGTTTTGAT+TGG | + | chr7_2:68407979-68407998 | Msa1071630:intron | 35.0% |
| !!! | ATGCTATGCTGGTTTTGATT+GGG | + | chr7_2:68407980-68407999 | Msa1071630:intron | 35.0% |
| !!! | CTGGTTTTGATTGGGTTTAT+TGG | + | chr7_2:68407988-68408007 | Msa1071630:intron | 35.0% |
| AAGTAGAACAGAGGATTGAA+TGG | - | chr7_2:68408079-68408098 | None:intergenic | 35.0% | |
| GGATTCCTTCATCAAAACAT+AGG | + | chr7_2:68408106-68408125 | Msa1071630:CDS | 35.0% | |
| GGCTTGAATAACACTGAATT+TGG | + | chr7_2:68408171-68408190 | Msa1071630:CDS | 35.0% | |
| GAGTTAGATGAGAATTGTGA+TGG | - | chr7_2:68408350-68408369 | None:intergenic | 35.0% | |
| ! | TGAGAACTTTTATGTGGTGT+AGG | - | chr7_2:68408465-68408484 | None:intergenic | 35.0% |
| ! | TGAGCTTGAGAACTTTTATG+TGG | - | chr7_2:68408471-68408490 | None:intergenic | 35.0% |
| AGAATGATGTTCAATGCTAG+GGG | - | chr7_2:68408574-68408593 | None:intergenic | 35.0% | |
| GAGAATGATGTTCAATGCTA+GGG | - | chr7_2:68408575-68408594 | None:intergenic | 35.0% | |
| TGAGAATGATGTTCAATGCT+AGG | - | chr7_2:68408576-68408595 | None:intergenic | 35.0% | |
| !!! | GTGGTTTTGGTGATGAAATA+GGG | - | chr7_2:68408602-68408621 | None:intergenic | 35.0% |
| !!! | TGTGGTTTTGGTGATGAAAT+AGG | - | chr7_2:68408603-68408622 | None:intergenic | 35.0% |
| TATTTCATCACCAAAACCAC+AGG | + | chr7_2:68408602-68408621 | Msa1071630:CDS | 35.0% | |
| AAAACACGGAAACACAGTGT+CGG | + | chr7_2:68405039-68405058 | Msa1071630:CDS | 40.0% | |
| !!! | TGTTCCTCTCTGCTTTGTTT+TGG | + | chr7_2:68405132-68405151 | Msa1071630:CDS | 40.0% |
| GTAACCAAAACAAAGCAGAG+AGG | - | chr7_2:68405139-68405158 | None:intergenic | 40.0% | |
| TTGTGTGTGGTTGTGATTTG+TGG | + | chr7_2:68405326-68405345 | Msa1071630:intron | 40.0% | |
| ! | TGTGTGTGGTTGTGATTTGT+GGG | + | chr7_2:68405327-68405346 | Msa1071630:intron | 40.0% |
| ! | TTTGGGGCTGCATTACATAA+CGG | + | chr7_2:68405681-68405700 | Msa1071630:intron | 40.0% |
| TCTGCACATGAATCATCATC+AGG | + | chr7_2:68405926-68405945 | Msa1071630:intron | 40.0% | |
| !! | ATCATCAGGTGACTAGTTTG+TGG | + | chr7_2:68405940-68405959 | Msa1071630:intron | 40.0% |
| TGATAGAGACTCAGGCATTA+TGG | + | chr7_2:68406076-68406095 | Msa1071630:intron | 40.0% | |
| GATAGAGACTCAGGCATTAT+GGG | + | chr7_2:68406077-68406096 | Msa1071630:intron | 40.0% | |
| ATAGAGACTCAGGCATTATG+GGG | + | chr7_2:68406078-68406097 | Msa1071630:intron | 40.0% | |
| TGATAAAGGCTCGGGTATTA+TGG | + | chr7_2:68406309-68406328 | Msa1071630:intron | 40.0% | |
| GATAAAGGCTCGGGTATTAT+GGG | + | chr7_2:68406310-68406329 | Msa1071630:intron | 40.0% | |
| ATAAAGGCTCGGGTATTATG+GGG | + | chr7_2:68406311-68406330 | Msa1071630:intron | 40.0% | |
| ATCGAGTAGTATGAGATGCT+TGG | + | chr7_2:68406348-68406367 | Msa1071630:intron | 40.0% | |
| ! | CGCTAGCTCTCATTGTTATT+AGG | + | chr7_2:68406499-68406518 | Msa1071630:intron | 40.0% |
| ATCATGGAAAGGAGTTGTTG+AGG | + | chr7_2:68406667-68406686 | Msa1071630:intron | 40.0% | |
| ! | TATAGGAGCATACAAGCATG+AGG | - | chr7_2:68406871-68406890 | None:intergenic | 40.0% |
| AGATAACAAATTGCAGCTCG+AGG | + | chr7_2:68407130-68407149 | Msa1071630:CDS | 40.0% | |
| ATGGCAGGCAAAGATATTTC+CGG | - | chr7_2:68407368-68407387 | None:intergenic | 40.0% | |
| AACTGATTGGCGTATTACCA+AGG | - | chr7_2:68407417-68407436 | None:intergenic | 40.0% | |
| AGAGGAAATGCATTCTGTTG+TGG | - | chr7_2:68407518-68407537 | None:intergenic | 40.0% | |
| ATTACGTCTGACATCCTATG+AGG | + | chr7_2:68407634-68407653 | Msa1071630:CDS | 40.0% | |
| GGTCGATTATTGTGAATTGG+AGG | - | chr7_2:68407786-68407805 | None:intergenic | 40.0% | |
| CAAGTCCCAACAACAATAAG+TGG | - | chr7_2:68407926-68407945 | None:intergenic | 40.0% | |
| AATCTTAGGCTATGCTATGC+TGG | + | chr7_2:68407969-68407988 | Msa1071630:intron | 40.0% | |
| GTCATCTTATCGAATTCCGA+AGG | + | chr7_2:68408030-68408049 | Msa1071630:CDS | 40.0% | |
| ATCGAATTCCGAAGGTTCAA+CGG | + | chr7_2:68408038-68408057 | Msa1071630:CDS | 40.0% | |
| ACAGAGGATTGAATGGTAGT+AGG | - | chr7_2:68408072-68408091 | None:intergenic | 40.0% | |
| TCAATCCTCTGTTCTACTTG+CGG | + | chr7_2:68408080-68408099 | Msa1071630:CDS | 40.0% | |
| CAATTGGCACAAACCATCAT+GGG | + | chr7_2:68408135-68408154 | Msa1071630:CDS | 40.0% | |
| AAGATTATGAGGTCCCATGA+TGG | - | chr7_2:68408151-68408170 | None:intergenic | 40.0% | |
| ATCATGGGACCTCATAATCT+TGG | + | chr7_2:68408150-68408169 | Msa1071630:CDS | 40.0% | |
| TCCCTTAATGGCAGTGATAA+TGG | + | chr7_2:68408234-68408253 | Msa1071630:CDS | 40.0% | |
| GCCATTATCACTGCCATTAA+GGG | - | chr7_2:68408238-68408257 | None:intergenic | 40.0% | |
| ! | GATGAGAATTGTGATGGTGA+TGG | - | chr7_2:68408344-68408363 | None:intergenic | 40.0% |
| CTATGCTCAAATGGACAATC+AGG | - | chr7_2:68408498-68408517 | None:intergenic | 40.0% | |
| GTCCATTTGAGCATAGACAA+AGG | + | chr7_2:68408502-68408521 | Msa1071630:CDS | 40.0% | |
| GACCTTTGTCTATGCTCAAA+TGG | - | chr7_2:68408507-68408526 | None:intergenic | 40.0% | |
| TTGAGCATAGACAAAGGTCT+AGG | + | chr7_2:68408508-68408527 | Msa1071630:CDS | 40.0% | |
| TGAATGAGATGCATGTGTAG+GGG | - | chr7_2:68408634-68408653 | None:intergenic | 40.0% | |
| CTGAATGAGATGCATGTGTA+GGG | - | chr7_2:68408635-68408654 | None:intergenic | 40.0% | |
| ACTGAATGAGATGCATGTGT+AGG | - | chr7_2:68408636-68408655 | None:intergenic | 40.0% | |
| GCAAAAGCAACATTTGGCAA+AGG | - | chr7_2:68408672-68408691 | None:intergenic | 40.0% | |
| AACCTAGCAGACAGTTTCAT+GGG | + | chr7_2:68408733-68408752 | Msa1071630:CDS | 40.0% | |
| !! | TGGCAGGTGTTGTTCTTCTT+CGG | - | chr7_2:68404991-68405010 | None:intergenic | 45.0% |
| TTCGGATCCACCACAAAACA+CGG | + | chr7_2:68405025-68405044 | Msa1071630:CDS | 45.0% | |
| ! | TGTGTTTCCGTGTTTTGTGG+TGG | - | chr7_2:68405035-68405054 | None:intergenic | 45.0% |
| ! | CACTGTGTTTCCGTGTTTTG+TGG | - | chr7_2:68405038-68405057 | None:intergenic | 45.0% |
| GGTGCAGTTCTTCTCAGATT+CGG | + | chr7_2:68405060-68405079 | Msa1071630:CDS | 45.0% | |
| TCTCAGATTCGGAAACTCCT+TGG | + | chr7_2:68405071-68405090 | Msa1071630:CDS | 45.0% | |
| ! | CGAGAATGCATCTGAAACCA+AGG | - | chr7_2:68405091-68405110 | None:intergenic | 45.0% |
| !! | CTGCATTACATAACGGATGG+AGG | + | chr7_2:68405688-68405707 | Msa1071630:intron | 45.0% |
| GATGAGTCTGATAGAGACTC+AGG | + | chr7_2:68406068-68406087 | Msa1071630:intron | 45.0% | |
| CATCTCATACGACTCAGTGT+TGG | - | chr7_2:68406113-68406132 | None:intergenic | 45.0% | |
| GAGTCGTATGAGATGCTTGA+TGG | + | chr7_2:68406118-68406137 | Msa1071630:intron | 45.0% | |
| GCATCTCATACTACTCGATG+TGG | - | chr7_2:68406347-68406366 | None:intergenic | 45.0% | |
| GAGTAGTATGAGATGCTTGG+TGG | + | chr7_2:68406351-68406370 | Msa1071630:intron | 45.0% | |
| ATAACAATGAGAGCTAGCGG+TGG | - | chr7_2:68406498-68406517 | None:intergenic | 45.0% | |
| ATGGAAAGGAGTTGTTGAGG+TGG | + | chr7_2:68406670-68406689 | Msa1071630:intron | 45.0% | |
| TGGAAAGGAGTTGTTGAGGT+GGG | + | chr7_2:68406671-68406690 | Msa1071630:intron | 45.0% | |
| AGGTGGGGATAATCAACAAG+TGG | + | chr7_2:68406687-68406706 | Msa1071630:intron | 45.0% | |
| GATTTAGTGGTGTGGCATAC+TGG | - | chr7_2:68406965-68406984 | None:intergenic | 45.0% | |
| ! | AGAGAGGTGTACTTGAGTAG+CGG | - | chr7_2:68407186-68407205 | None:intergenic | 45.0% |
| TTGTCTTTAGACCCCTTACC+TGG | + | chr7_2:68407293-68407312 | Msa1071630:CDS | 45.0% | |
| TGTCTTTAGACCCCTTACCT+GGG | + | chr7_2:68407294-68407313 | Msa1071630:CDS | 45.0% | |
| !!! | ACTTTTGTCTTGTTTGGCCC+AGG | - | chr7_2:68407314-68407333 | None:intergenic | 45.0% |
| TGGGCCAAACAAGACAAAAG+TGG | + | chr7_2:68407313-68407332 | Msa1071630:CDS | 45.0% | |
| TGGCAGGCAAAGATATTTCC+GGG | - | chr7_2:68407367-68407386 | None:intergenic | 45.0% | |
| CTGACAAGTCAGCTAAAGTC+TGG | + | chr7_2:68407611-68407630 | Msa1071630:CDS | 45.0% | |
| AGCATCTACCGTTGAACCTT+CGG | - | chr7_2:68408049-68408068 | None:intergenic | 45.0% | |
| GCAATTGGCACAAACCATCA+TGG | + | chr7_2:68408134-68408153 | Msa1071630:CDS | 45.0% | |
| !! | ATTAAGGGAGTGCTGCAAGA+TGG | - | chr7_2:68408223-68408242 | None:intergenic | 45.0% |
| ATCTTGCAGCACTCCCTTAA+TGG | + | chr7_2:68408222-68408241 | Msa1071630:CDS | 45.0% | |
| GGCCATTATCACTGCCATTA+AGG | - | chr7_2:68408239-68408258 | None:intergenic | 45.0% | |
| !! | TGTGATGGTGATGGTGATGA+TGG | - | chr7_2:68408335-68408354 | None:intergenic | 45.0% |
| TGCTCAAATGGACAATCAGG+AGG | - | chr7_2:68408495-68408514 | None:intergenic | 45.0% | |
| GAATGAGATGCATGTGTAGG+GGG | - | chr7_2:68408633-68408652 | None:intergenic | 45.0% | |
| TTTGGCAAAGGACTCAAAGC+AGG | - | chr7_2:68408660-68408679 | None:intergenic | 45.0% | |
| GCATGGGCAAAAGCAACATT+TGG | - | chr7_2:68408678-68408697 | None:intergenic | 45.0% | |
| CAACCTAGCAGACAGTTTCA+TGG | + | chr7_2:68408732-68408751 | Msa1071630:CDS | 45.0% | |
| !!! | TTTATTTATTTTTTCTATTT+TGG | + | chr7_2:68405589-68405608 | Msa1071630:intron | 5.0% |
| !!! | TTTTTTACATTTAATTTATT+TGG | + | chr7_2:68405728-68405747 | Msa1071630:intron | 5.0% |
| !! | TCGGTGGCTGCATTGTTTTG+TGG | + | chr7_2:68405231-68405250 | Msa1071630:intron | 50.0% |
| ! | GGGCTGCATTACATAACGGA+TGG | + | chr7_2:68405685-68405704 | Msa1071630:intron | 50.0% |
| TGGTTGTTAGTAGCTCGGAG+AGG | + | chr7_2:68406198-68406217 | Msa1071630:intron | 50.0% | |
| GGTTGTTAGTAGCTCGGAGA+GGG | + | chr7_2:68406199-68406218 | Msa1071630:intron | 50.0% | |
| ! | CAAAGCGTCATAGAGTGCAG+CGG | + | chr7_2:68406256-68406275 | Msa1071630:intron | 50.0% |
| !! | CTGTGGCGGTGCTATGATAA+AGG | + | chr7_2:68406295-68406314 | Msa1071630:intron | 50.0% |
| !! | GCGGTGCTATGATAAAGGCT+CGG | + | chr7_2:68406300-68406319 | Msa1071630:intron | 50.0% |
| !! | CGGTGCTATGATAAAGGCTC+GGG | + | chr7_2:68406301-68406320 | Msa1071630:intron | 50.0% |
| AGAGCTAGCGGTGGATCATA+TGG | - | chr7_2:68406489-68406508 | None:intergenic | 50.0% | |
| GGAAAGGAGTTGTTGAGGTG+GGG | + | chr7_2:68406672-68406691 | Msa1071630:intron | 50.0% | |
| ! | TCTTGTTTGGCCCAGGTAAG+GGG | - | chr7_2:68407307-68407326 | None:intergenic | 50.0% |
| !! | GTCTTGTTTGGCCCAGGTAA+GGG | - | chr7_2:68407308-68407327 | None:intergenic | 50.0% |
| !! | TGTCTTGTTTGGCCCAGGTA+AGG | - | chr7_2:68407309-68407328 | None:intergenic | 50.0% |
| GTATTTGCGGTCGATCCTGA+TGG | + | chr7_2:68407335-68407354 | Msa1071630:CDS | 50.0% | |
| ACGTGAGCTGGAGAACTGAT+TGG | - | chr7_2:68407430-68407449 | None:intergenic | 50.0% | |
| CAGCTCACGTCATCCTTGTT+CGG | + | chr7_2:68407440-68407459 | Msa1071630:CDS | 50.0% | |
| AAAGTGGGGATCTCCGAACA+AGG | - | chr7_2:68407456-68407475 | None:intergenic | 50.0% | |
| CTTGTTTGCACTGTCTGCAG+AGG | - | chr7_2:68407536-68407555 | None:intergenic | 50.0% | |
| TCCTCTGTTCTACTTGCGGT+TGG | + | chr7_2:68408084-68408103 | Msa1071630:CDS | 50.0% | |
| CCTCTGTTCTACTTGCGGTT+GGG | + | chr7_2:68408085-68408104 | Msa1071630:CDS | 50.0% | |
| !! | TGATGGTGGTGTGGAGAATG+AGG | - | chr7_2:68408291-68408310 | None:intergenic | 50.0% |
| !! | TGATGATGGTGATGGTGGTG+TGG | - | chr7_2:68408300-68408319 | None:intergenic | 50.0% |
| !! | GATGGTGATGGTGATGATGG+TGG | - | chr7_2:68408332-68408351 | None:intergenic | 50.0% |
| GCAGGTATAGGAGAAGTTGC+AGG | - | chr7_2:68408372-68408391 | None:intergenic | 50.0% | |
| TTAGGCGCAGATGCAGGTAT+AGG | - | chr7_2:68408384-68408403 | None:intergenic | 50.0% | |
| AGACAAAGGTCTAGGCGTAG+TGG | + | chr7_2:68408516-68408535 | Msa1071630:CDS | 50.0% | |
| AAAGGTCTAGGCGTAGTGGT+GGG | + | chr7_2:68408520-68408539 | Msa1071630:CDS | 50.0% | |
| AGCCCATGAAACTGTCTGCT+AGG | - | chr7_2:68408738-68408757 | None:intergenic | 50.0% | |
| GAAGAACAACACCTGCCACG+TGG | + | chr7_2:68404993-68405012 | Msa1071630:CDS | 55.0% | |
| AAGATGTTACGCCACGTGGC+AGG | - | chr7_2:68405007-68405026 | None:intergenic | 55.0% | |
| GCCACGTGGCGTAACATCTT+CGG | + | chr7_2:68405007-68405026 | Msa1071630:CDS | 55.0% | |
| TCCGAAGATGTTACGCCACG+TGG | - | chr7_2:68405011-68405030 | None:intergenic | 55.0% | |
| GTGTCGTGTCTCGTAGCCTT+AGG | + | chr7_2:68405987-68406006 | Msa1071630:intron | 55.0% | |
| AGCTCGGAGAGGGCTAACAA+TGG | + | chr7_2:68406209-68406228 | Msa1071630:intron | 55.0% | |
| TCGGAGAGGGCTAACAATGG+AGG | + | chr7_2:68406212-68406231 | Msa1071630:intron | 55.0% | |
| CGGAGAGGGCTAACAATGGA+GGG | + | chr7_2:68406213-68406232 | Msa1071630:intron | 55.0% | |
| GGAGAGGGCTAACAATGGAG+GGG | + | chr7_2:68406214-68406233 | Msa1071630:intron | 55.0% | |
| CTAACAATGGAGGGGCTGAC+CGG | + | chr7_2:68406222-68406241 | Msa1071630:intron | 55.0% | |
| GCCACAGAGAGCTAACGTCT+CGG | - | chr7_2:68406282-68406301 | None:intergenic | 55.0% | |
| ! | GAGACGTTAGCTCTCTGTGG+CGG | + | chr7_2:68406281-68406300 | Msa1071630:intron | 55.0% |
| CAGAGCACGCACAACAGTTG+CGG | + | chr7_2:68406453-68406472 | Msa1071630:intron | 55.0% | |
| GGAAAACTGTGTGGCAGTGC+TGG | - | chr7_2:68406538-68406557 | None:intergenic | 55.0% | |
| AGGTGTACTTGAGTAGCGGC+AGG | - | chr7_2:68407182-68407201 | None:intergenic | 55.0% | |
| TTTGCGGTCGATCCTGATGG+TGG | + | chr7_2:68407338-68407357 | Msa1071630:CDS | 55.0% | |
| ATTTCCGGGTGTCCACCATC+AGG | - | chr7_2:68407353-68407372 | None:intergenic | 55.0% | |
| CGAACAAGGATGACGTGAGC+TGG | - | chr7_2:68407442-68407461 | None:intergenic | 55.0% | |
| CCCAACCGCAAGTAGAACAG+AGG | - | chr7_2:68408088-68408107 | None:intergenic | 55.0% | |
| TGGTGTGGAGAATGAGGCAC+AGG | - | chr7_2:68408285-68408304 | None:intergenic | 55.0% | |
| !! | GGTGGTGATGATGGTGATGG+TGG | - | chr7_2:68408305-68408324 | None:intergenic | 55.0% |
| !! | GGTGGTGGTGATGATGGTGA+TGG | - | chr7_2:68408308-68408327 | None:intergenic | 55.0% |
| !! | GATGGTGATGATGGTGGTGG+TGG | - | chr7_2:68408326-68408345 | None:intergenic | 55.0% |
| !! | GGTGATGGTGATGATGGTGG+TGG | - | chr7_2:68408329-68408348 | None:intergenic | 55.0% |
| ATCTGCGCCTAAACCTGGAG+AGG | + | chr7_2:68408392-68408411 | Msa1071630:CDS | 55.0% | |
| TCTGCGCCTAAACCTGGAGA+GGG | + | chr7_2:68408393-68408412 | Msa1071630:CDS | 55.0% | |
| GTTGCACCCTCTCCAGGTTT+AGG | - | chr7_2:68408402-68408421 | None:intergenic | 55.0% | |
| CCCTTTCTGTAGCAGCAGGA+GGG | - | chr7_2:68408440-68408459 | None:intergenic | 55.0% | |
| CCCTCCTGCTGCTACAGAAA+GGG | + | chr7_2:68408437-68408456 | Msa1071630:CDS | 55.0% | |
| CAAAGGTCTAGGCGTAGTGG+TGG | + | chr7_2:68408519-68408538 | Msa1071630:CDS | 55.0% | |
| TCAATGCTAGGGGCAACAGC+AGG | - | chr7_2:68408564-68408583 | None:intergenic | 55.0% | |
| CTGCTAGGTTGTTCTGCAGC+CGG | - | chr7_2:68408723-68408742 | None:intergenic | 55.0% | |
| ! | GCCGAGACGTTAGCTCTCTG+TGG | + | chr7_2:68406278-68406297 | Msa1071630:intron | 60.0% |
| !! | CGATCCTGATGGTGGACACC+CGG | + | chr7_2:68407346-68407365 | Msa1071630:CDS | 60.0% |
| !! | GCAGTGATAATGGCCCAGCG+AGG | + | chr7_2:68408244-68408263 | Msa1071630:CDS | 60.0% |
| CAGGAGAAGGTGACCTCGCT+GGG | - | chr7_2:68408260-68408279 | None:intergenic | 60.0% | |
| TGAGGCACAGGAGCAGGAGA+AGG | - | chr7_2:68408273-68408292 | None:intergenic | 60.0% | |
| GGAGAATGAGGCACAGGAGC+AGG | - | chr7_2:68408279-68408298 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGTGGTGATGA+TGG | - | chr7_2:68408314-68408333 | None:intergenic | 60.0% |
| !! | GGTGATGATGGTGGTGGTGG+TGG | - | chr7_2:68408323-68408342 | None:intergenic | 60.0% |
| CCAGGTTTAGGCGCAGATGC+AGG | - | chr7_2:68408390-68408409 | None:intergenic | 60.0% | |
| CCTGCATCTGCGCCTAAACC+TGG | + | chr7_2:68408387-68408406 | Msa1071630:CDS | 60.0% | |
| GGTGCAACTCCGCCTGAAGT+TGG | + | chr7_2:68408414-68408433 | Msa1071630:CDS | 60.0% | |
| GCCCTCCTGCTGCTACAGAA+AGG | + | chr7_2:68408436-68408455 | Msa1071630:CDS | 60.0% | |
| GCCCTTTCTGTAGCAGCAGG+AGG | - | chr7_2:68408441-68408460 | None:intergenic | 60.0% | |
| GGTGCCCTTTCTGTAGCAGC+AGG | - | chr7_2:68408444-68408463 | None:intergenic | 60.0% | |
| ! | GGGGGTTCAGCCTGTGGTTT+TGG | - | chr7_2:68408615-68408634 | None:intergenic | 60.0% |
| TGTGTAGGGGGTTCAGCCTG+TGG | - | chr7_2:68408621-68408640 | None:intergenic | 60.0% | |
| CTTAGGTGGGGGCTCAGCAT+GGG | - | chr7_2:68408694-68408713 | None:intergenic | 60.0% | |
| TCTTAGGTGGGGGCTCAGCA+TGG | - | chr7_2:68408695-68408714 | None:intergenic | 60.0% | |
| ATGCTGAGCCCCCACCTAAG+AGG | + | chr7_2:68408694-68408713 | Msa1071630:CDS | 60.0% | |
| TGCTGAGCCCCCACCTAAGA+GGG | + | chr7_2:68408695-68408714 | Msa1071630:CDS | 60.0% | |
| ! | AGCCGGTTCCCTCTTAGGTG+GGG | - | chr7_2:68408706-68408725 | None:intergenic | 60.0% |
| ! | CAGCCGGTTCCCTCTTAGGT+GGG | - | chr7_2:68408707-68408726 | None:intergenic | 60.0% |
| ! | TCTGCAGCCGGTTCCCTCTT+AGG | - | chr7_2:68408711-68408730 | None:intergenic | 60.0% |
| GCAGGAGAAGGTGACCTCGC+TGG | - | chr7_2:68408261-68408280 | None:intergenic | 65.0% | |
| GCAGGAGGGCCAACTTCAGG+CGG | - | chr7_2:68408426-68408445 | None:intergenic | 65.0% | |
| GCAGCAGGAGGGCCAACTTC+AGG | - | chr7_2:68408429-68408448 | None:intergenic | 65.0% | |
| GCCCCCACCTAAGAGGGAAC+CGG | + | chr7_2:68408701-68408720 | Msa1071630:CDS | 65.0% | |
| ! | GCCGGTTCCCTCTTAGGTGG+GGG | - | chr7_2:68408705-68408724 | None:intergenic | 65.0% |
| ! | GCAGCCGGTTCCCTCTTAGG+TGG | - | chr7_2:68408708-68408727 | None:intergenic | 65.0% |
| GGCGGAGTTGCACCCTCTCC+AGG | - | chr7_2:68408408-68408427 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 68404984 | 68408785 | 68404984 | ID=Msa1071630;Name=Msa1071630 |
| chr7_2 | mRNA | 68404984 | 68408785 | 68404984 | ID=Msa1071630-mRNA-1;Parent=Msa1071630;Name=Msa1071630-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.5|0.6|0.8|1|1|5|0|515 |
| chr7_2 | exon | 68404984 | 68405206 | 68404984 | ID=Msa1071630-mRNA-1:exon:14981;Parent=Msa1071630-mRNA-1 |
| chr7_2 | exon | 68406521 | 68406592 | 68406521 | ID=Msa1071630-mRNA-1:exon:14982;Parent=Msa1071630-mRNA-1 |
| chr7_2 | exon | 68407078 | 68407193 | 68407078 | ID=Msa1071630-mRNA-1:exon:14983;Parent=Msa1071630-mRNA-1 |
| chr7_2 | exon | 68407284 | 68407655 | 68407284 | ID=Msa1071630-mRNA-1:exon:14984;Parent=Msa1071630-mRNA-1 |
| chr7_2 | exon | 68408021 | 68408785 | 68408021 | ID=Msa1071630-mRNA-1:exon:14985;Parent=Msa1071630-mRNA-1 |
| chr7_2 | CDS | 68404984 | 68405206 | 68404984 | ID=Msa1071630-mRNA-1:cds;Parent=Msa1071630-mRNA-1 |
| chr7_2 | CDS | 68406521 | 68406592 | 68406521 | ID=Msa1071630-mRNA-1:cds;Parent=Msa1071630-mRNA-1 |
| chr7_2 | CDS | 68407078 | 68407193 | 68407078 | ID=Msa1071630-mRNA-1:cds;Parent=Msa1071630-mRNA-1 |
| chr7_2 | CDS | 68407284 | 68407655 | 68407284 | ID=Msa1071630-mRNA-1:cds;Parent=Msa1071630-mRNA-1 |
| chr7_2 | CDS | 68408021 | 68408785 | 68408021 | ID=Msa1071630-mRNA-1:cds;Parent=Msa1071630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
