Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1072470 | XP_013631799.1 | 89.933 | 149 | 0 | 1 | 1 | 134 | 1 | 149 | 1.16e-86 | 260 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1072470 | sp|P93087|CALM_CAPAN | 89.933 | 149 | 0 | 1 | 1 | 134 | 1 | 149 | 6.97e-89 | 257 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1072470 | A0A0D3C290 | 89.933 | 149 | 0 | 1 | 1 | 134 | 1 | 149 | 5.54e-87 | 260 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1072470 | Msa1121490 | 0.815886 | 7.346533e-52 | -8.615850e-47 |
Msa1072470 | Msa1137570 | 0.811636 | 6.341687e-51 | -8.615850e-47 |
Msa1072470 | Msa1284680 | 0.804823 | 1.795112e-49 | -8.615850e-47 |
Msa0844490 | Msa1072470 | 0.816830 | 4.516178e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1072470 | MtrunA17_Chr7g0254731 | 89.933 | 149 | 0 | 1 | 1 | 134 | 1 | 149 | 3.82e-90 | 258 |
Msa1072470 | MtrunA17_Chr6g0460211 | 89.262 | 149 | 1 | 1 | 1 | 134 | 1 | 149 | 1.87e-89 | 256 |
Msa1072470 | MtrunA17_Chr5g0440931 | 88.591 | 149 | 2 | 1 | 1 | 134 | 1 | 149 | 4.82e-89 | 255 |
Msa1072470 | MtrunA17_Chr3g0093271 | 88.591 | 149 | 2 | 1 | 1 | 134 | 52 | 200 | 5.50e-89 | 256 |
Msa1072470 | MtrunA17_Chr1g0188171 | 71.622 | 148 | 27 | 1 | 1 | 133 | 1 | 148 | 1.85e-71 | 211 |
Msa1072470 | MtrunA17_Chr1g0188171 | 46.479 | 71 | 35 | 1 | 67 | 134 | 6 | 76 | 2.50e-12 | 60.1 |
Msa1072470 | MtrunA17_Chr1g0166281 | 70.946 | 148 | 28 | 1 | 1 | 133 | 1 | 148 | 8.05e-71 | 209 |
Msa1072470 | MtrunA17_Chr1g0166281 | 47.692 | 65 | 34 | 0 | 70 | 134 | 12 | 76 | 2.09e-12 | 60.5 |
Msa1072470 | MtrunA17_Chr1g0185001 | 53.741 | 147 | 52 | 2 | 1 | 132 | 1 | 146 | 5.49e-49 | 154 |
Msa1072470 | MtrunA17_Chr1g0185001 | 38.961 | 77 | 46 | 1 | 58 | 134 | 1 | 76 | 9.39e-12 | 58.5 |
Msa1072470 | MtrunA17_Chr7g0274101 | 56.081 | 148 | 50 | 1 | 1 | 133 | 1 | 148 | 1.30e-45 | 145 |
Msa1072470 | MtrunA17_Chr5g0398751 | 44.295 | 149 | 66 | 2 | 1 | 134 | 1 | 147 | 5.32e-38 | 125 |
Msa1072470 | MtrunA17_Chr3g0100541 | 47.945 | 146 | 46 | 2 | 1 | 131 | 41 | 171 | 1.27e-34 | 118 |
Msa1072470 | MtrunA17_Chr8g0366401 | 41.216 | 148 | 69 | 2 | 4 | 133 | 9 | 156 | 1.45e-33 | 115 |
Msa1072470 | MtrunA17_Chr3g0100511 | 42.759 | 145 | 53 | 2 | 1 | 130 | 41 | 170 | 2.57e-29 | 104 |
Msa1072470 | MtrunA17_Chr7g0245231 | 39.161 | 143 | 72 | 1 | 4 | 131 | 22 | 164 | 5.54e-29 | 103 |
Msa1072470 | MtrunA17_Chr7g0245231 | 48.485 | 66 | 34 | 0 | 69 | 134 | 29 | 94 | 3.80e-13 | 62.8 |
Msa1072470 | MtrunA17_Chr4g0062221 | 38.298 | 141 | 70 | 2 | 8 | 131 | 7 | 147 | 1.34e-27 | 100 |
Msa1072470 | MtrunA17_Chr3g0100561 | 42.069 | 145 | 54 | 2 | 1 | 130 | 41 | 170 | 1.63e-27 | 100 |
Msa1072470 | MtrunA17_Chr6g0450921 | 37.762 | 143 | 74 | 1 | 4 | 131 | 21 | 163 | 3.67e-27 | 99.0 |
Msa1072470 | MtrunA17_Chr6g0450921 | 44.737 | 76 | 42 | 0 | 59 | 134 | 18 | 93 | 2.09e-13 | 63.5 |
Msa1072470 | MtrunA17_Chr1g0161211 | 48.624 | 109 | 56 | 0 | 26 | 134 | 75 | 183 | 1.63e-26 | 98.2 |
Msa1072470 | MtrunA17_Chr4g0033601 | 39.855 | 138 | 66 | 2 | 11 | 131 | 4 | 141 | 4.43e-26 | 95.9 |
Msa1072470 | MtrunA17_Chr8g0368681 | 37.762 | 143 | 72 | 2 | 6 | 131 | 6 | 148 | 3.32e-25 | 94.0 |
Msa1072470 | MtrunA17_Chr5g0434951 | 38.519 | 135 | 67 | 2 | 12 | 131 | 4 | 137 | 9.36e-24 | 89.4 |
Msa1072470 | MtrunA17_Chr8g0391691 | 41.985 | 131 | 61 | 1 | 12 | 127 | 36 | 166 | 1.02e-23 | 90.9 |
Msa1072470 | MtrunA17_Chr3g0100501 | 41.860 | 129 | 37 | 2 | 1 | 129 | 41 | 131 | 4.37e-23 | 87.8 |
Msa1072470 | MtrunA17_Chr8g0392951 | 40.000 | 135 | 65 | 3 | 12 | 131 | 24 | 157 | 4.77e-23 | 88.6 |
Msa1072470 | MtrunA17_Chr7g0267751 | 39.041 | 146 | 71 | 3 | 1 | 131 | 429 | 571 | 1.65e-22 | 91.7 |
Msa1072470 | MtrunA17_Chr1g0169581 | 35.766 | 137 | 71 | 2 | 12 | 131 | 4 | 140 | 1.00e-21 | 84.3 |
Msa1072470 | MtrunA17_Chr3g0111371 | 37.778 | 135 | 65 | 2 | 12 | 131 | 5 | 135 | 2.85e-21 | 83.2 |
Msa1072470 | MtrunA17_Chr6g0482731 | 35.971 | 139 | 72 | 2 | 12 | 134 | 26 | 163 | 3.91e-21 | 83.6 |
Msa1072470 | MtrunA17_Chr7g0256701 | 37.415 | 147 | 72 | 3 | 5 | 131 | 66 | 212 | 7.11e-21 | 84.0 |
Msa1072470 | MtrunA17_Chr3g0100461 | 63.636 | 55 | 20 | 0 | 78 | 132 | 53 | 107 | 1.35e-20 | 80.9 |
Msa1072470 | MtrunA17_Chr7g0245911 | 35.172 | 145 | 70 | 3 | 11 | 131 | 46 | 190 | 3.07e-20 | 82.0 |
Msa1072470 | MtrunA17_Chr5g0444171 | 36.054 | 147 | 75 | 4 | 1 | 131 | 386 | 529 | 8.77e-20 | 84.0 |
Msa1072470 | MtrunA17_Chr8g0385341 | 34.932 | 146 | 77 | 3 | 1 | 131 | 324 | 466 | 1.11e-19 | 83.6 |
Msa1072470 | MtrunA17_Chr1g0176751 | 34.247 | 146 | 78 | 3 | 1 | 131 | 418 | 560 | 1.49e-19 | 83.6 |
Msa1072470 | MtrunA17_Chr4g0064231 | 37.908 | 153 | 62 | 4 | 12 | 131 | 64 | 216 | 1.66e-19 | 80.5 |
Msa1072470 | MtrunA17_Chr1g0200601 | 36.486 | 148 | 72 | 4 | 1 | 131 | 324 | 466 | 1.93e-19 | 82.8 |
Msa1072470 | MtrunA17_Chr7g0256171 | 40.426 | 141 | 65 | 3 | 11 | 133 | 4 | 143 | 3.78e-19 | 78.2 |
Msa1072470 | MtrunA17_Chr4g0074811 | 34.694 | 147 | 77 | 4 | 1 | 131 | 385 | 528 | 4.85e-19 | 82.0 |
Msa1072470 | MtrunA17_Chr3g0131181 | 33.562 | 146 | 79 | 3 | 1 | 131 | 323 | 465 | 7.06e-19 | 81.3 |
Msa1072470 | MtrunA17_Chr7g0242561 | 34.247 | 146 | 80 | 2 | 1 | 131 | 350 | 494 | 1.82e-18 | 80.1 |
Msa1072470 | MtrunA17_Chr7g0225921 | 31.690 | 142 | 77 | 4 | 8 | 132 | 2 | 140 | 2.91e-18 | 75.5 |
Msa1072470 | MtrunA17_Chr4g0059951 | 33.108 | 148 | 79 | 5 | 1 | 131 | 367 | 511 | 4.21e-18 | 79.3 |
Msa1072470 | MtrunA17_Chr3g0100471 | 54.667 | 75 | 19 | 1 | 1 | 60 | 41 | 115 | 4.48e-18 | 74.3 |
Msa1072470 | MtrunA17_Chr5g0397101 | 33.784 | 148 | 77 | 4 | 1 | 131 | 360 | 503 | 5.69e-18 | 79.0 |
Msa1072470 | MtrunA17_Chr1g0157131 | 33.108 | 148 | 78 | 4 | 1 | 131 | 368 | 511 | 6.00e-18 | 79.0 |
Msa1072470 | MtrunA17_Chr8g0387671 | 33.784 | 148 | 77 | 4 | 1 | 131 | 360 | 503 | 8.97e-18 | 78.2 |
Msa1072470 | MtrunA17_Chr3g0098951 | 33.553 | 152 | 79 | 3 | 1 | 131 | 377 | 527 | 1.47e-17 | 77.8 |
Msa1072470 | MtrunA17_Chr8g0351681 | 33.108 | 148 | 76 | 3 | 7 | 131 | 44 | 191 | 1.60e-17 | 74.7 |
Msa1072470 | MtrunA17_Chr1g0170281 | 32.877 | 146 | 80 | 3 | 1 | 131 | 412 | 554 | 1.73e-17 | 77.4 |
Msa1072470 | MtrunA17_Chr3g0116141 | 31.655 | 139 | 69 | 4 | 13 | 131 | 6 | 138 | 2.71e-17 | 72.8 |
Msa1072470 | MtrunA17_Chr3g0116151 | 31.655 | 139 | 69 | 4 | 13 | 131 | 7 | 139 | 2.83e-17 | 72.8 |
Msa1072470 | MtrunA17_Chr0c02g0489761 | 34.247 | 146 | 79 | 3 | 1 | 131 | 372 | 515 | 4.07e-17 | 76.3 |
Msa1072470 | MtrunA17_Chr0c02g0489761 | 38.554 | 83 | 48 | 1 | 53 | 132 | 363 | 445 | 6.90e-11 | 58.5 |
Msa1072470 | MtrunA17_Chr4g0057651 | 32.857 | 140 | 69 | 5 | 12 | 132 | 6 | 139 | 7.59e-17 | 71.6 |
Msa1072470 | MtrunA17_Chr5g0441691 | 32.877 | 146 | 81 | 3 | 1 | 131 | 362 | 505 | 1.01e-16 | 75.1 |
Msa1072470 | MtrunA17_Chr5g0448721 | 31.507 | 146 | 82 | 3 | 1 | 131 | 390 | 532 | 1.37e-16 | 74.7 |
Msa1072470 | MtrunA17_Chr1g0169621 | 30.488 | 164 | 72 | 3 | 12 | 133 | 4 | 167 | 1.91e-16 | 71.2 |
Msa1072470 | MtrunA17_Chr4g0057641 | 32.143 | 140 | 70 | 5 | 12 | 132 | 6 | 139 | 3.79e-16 | 70.1 |
Msa1072470 | MtrunA17_Chr4g0033371 | 31.973 | 147 | 82 | 4 | 1 | 132 | 366 | 509 | 5.59e-16 | 73.2 |
Msa1072470 | MtrunA17_Chr4g0074791 | 34.058 | 138 | 79 | 6 | 1 | 131 | 390 | 522 | 8.95e-16 | 72.4 |
Msa1072470 | MtrunA17_Chr4g0044961 | 35.036 | 137 | 72 | 4 | 10 | 131 | 55 | 189 | 1.46e-15 | 69.7 |
Msa1072470 | MtrunA17_Chr4g0057661 | 31.429 | 140 | 71 | 5 | 12 | 132 | 6 | 139 | 3.22e-15 | 67.4 |
Msa1072470 | MtrunA17_Chr2g0329371 | 36.429 | 140 | 70 | 3 | 11 | 131 | 63 | 202 | 4.31e-15 | 68.6 |
Msa1072470 | MtrunA17_Chr6g0459231 | 29.286 | 140 | 83 | 3 | 8 | 132 | 4 | 142 | 4.69e-15 | 67.0 |
Msa1072470 | MtrunA17_Chr5g0402331 | 35.000 | 140 | 68 | 4 | 12 | 132 | 48 | 183 | 5.13e-15 | 68.2 |
Msa1072470 | MtrunA17_Chr5g0402361 | 40.000 | 95 | 56 | 1 | 38 | 132 | 89 | 182 | 1.63e-14 | 68.6 |
Msa1072470 | MtrunA17_Chr5g0402361 | 35.000 | 140 | 68 | 4 | 12 | 132 | 220 | 355 | 3.65e-14 | 67.8 |
Msa1072470 | MtrunA17_Chr1g0173541 | 28.188 | 149 | 89 | 3 | 1 | 133 | 346 | 492 | 2.31e-14 | 68.6 |
Msa1072470 | MtrunA17_Chr5g0396261 | 34.234 | 111 | 63 | 2 | 26 | 130 | 6 | 112 | 2.43e-13 | 62.0 |
Msa1072470 | MtrunA17_Chr3g0121191 | 30.469 | 128 | 82 | 2 | 11 | 132 | 92 | 218 | 2.79e-13 | 64.3 |
Msa1072470 | MtrunA17_Chr1g0176421 | 28.090 | 178 | 78 | 4 | 1 | 131 | 455 | 629 | 2.84e-13 | 65.5 |
Msa1072470 | MtrunA17_Chr7g0257751 | 27.517 | 149 | 90 | 3 | 1 | 133 | 352 | 498 | 7.47e-13 | 64.3 |
Msa1072470 | MtrunA17_Chr5g0409441 | 27.737 | 137 | 84 | 1 | 6 | 127 | 16 | 152 | 9.33e-13 | 61.6 |
Msa1072470 | MtrunA17_Chr4g0042491 | 44.595 | 74 | 41 | 0 | 58 | 131 | 102 | 175 | 6.40e-12 | 59.7 |
Msa1072470 | MtrunA17_Chr8g0373691 | 28.889 | 135 | 79 | 3 | 13 | 131 | 54 | 187 | 6.13e-11 | 57.4 |
Msa1072470 | MtrunA17_Chr7g0252401 | 28.671 | 143 | 80 | 4 | 1 | 127 | 23 | 159 | 8.14e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1072470 | AT3G43810.2 | 89.189 | 148 | 1 | 1 | 1 | 133 | 1 | 148 | 9.67e-90 | 259 |
Msa1072470 | AT3G43810.2 | 45.455 | 77 | 41 | 1 | 58 | 134 | 1 | 76 | 3.32e-13 | 64.3 |
Msa1072470 | AT2G27030.3 | 88.591 | 149 | 2 | 1 | 1 | 134 | 1 | 149 | 2.29e-89 | 257 |
Msa1072470 | AT3G43810.1 | 89.262 | 149 | 1 | 1 | 1 | 134 | 1 | 149 | 2.59e-89 | 256 |
Msa1072470 | AT5G21274.1 | 88.591 | 149 | 2 | 1 | 1 | 134 | 1 | 149 | 7.02e-89 | 255 |
Msa1072470 | AT3G56800.1 | 88.591 | 149 | 2 | 1 | 1 | 134 | 1 | 149 | 7.84e-89 | 254 |
Msa1072470 | AT2G41110.1 | 88.591 | 149 | 2 | 1 | 1 | 134 | 1 | 149 | 7.84e-89 | 254 |
Msa1072470 | AT2G27030.1 | 88.591 | 149 | 2 | 1 | 1 | 134 | 1 | 149 | 7.84e-89 | 254 |
Msa1072470 | AT1G66410.1 | 86.577 | 149 | 5 | 1 | 1 | 134 | 1 | 149 | 1.95e-87 | 251 |
Msa1072470 | AT5G37780.1 | 86.577 | 149 | 5 | 1 | 1 | 134 | 1 | 149 | 1.95e-87 | 251 |
Msa1072470 | AT2G41110.2 | 81.988 | 161 | 2 | 1 | 1 | 134 | 1 | 161 | 1.55e-86 | 249 |
Msa1072470 | AT5G37780.2 | 78.659 | 164 | 5 | 1 | 1 | 134 | 1 | 164 | 6.12e-85 | 245 |
Msa1072470 | AT5G37780.3 | 73.714 | 175 | 5 | 1 | 1 | 134 | 1 | 175 | 3.49e-83 | 241 |
Msa1072470 | AT1G66410.2 | 81.132 | 159 | 5 | 1 | 1 | 134 | 1 | 159 | 1.53e-81 | 237 |
Msa1072470 | AT3G43810.4 | 99.083 | 109 | 1 | 0 | 26 | 134 | 5 | 113 | 6.10e-75 | 218 |
Msa1072470 | AT3G43810.3 | 99.083 | 109 | 1 | 0 | 26 | 134 | 5 | 113 | 6.10e-75 | 218 |
Msa1072470 | AT1G66410.4 | 96.330 | 109 | 4 | 0 | 26 | 134 | 5 | 113 | 1.42e-73 | 215 |
Msa1072470 | AT1G66410.3 | 96.330 | 109 | 4 | 0 | 26 | 134 | 5 | 113 | 1.42e-73 | 215 |
Msa1072470 | AT5G37780.4 | 96.330 | 109 | 4 | 0 | 26 | 134 | 28 | 136 | 1.86e-73 | 215 |
Msa1072470 | AT3G22930.1 | 70.139 | 144 | 28 | 1 | 4 | 132 | 27 | 170 | 3.81e-69 | 206 |
Msa1072470 | AT4G14640.1 | 68.531 | 143 | 30 | 1 | 5 | 132 | 6 | 148 | 7.97e-68 | 202 |
Msa1072470 | AT4G14640.2 | 74.528 | 106 | 27 | 0 | 27 | 132 | 25 | 130 | 4.68e-57 | 174 |
Msa1072470 | AT2G41090.1 | 57.047 | 149 | 46 | 2 | 1 | 134 | 1 | 146 | 5.34e-49 | 155 |
Msa1072470 | AT2G41100.7 | 50.602 | 166 | 50 | 3 | 1 | 134 | 55 | 220 | 5.24e-44 | 145 |
Msa1072470 | AT2G41100.7 | 45.082 | 122 | 51 | 2 | 26 | 131 | 6 | 127 | 6.41e-27 | 101 |
Msa1072470 | AT2G41100.7 | 52.128 | 94 | 27 | 2 | 4 | 82 | 148 | 238 | 7.49e-21 | 85.9 |
Msa1072470 | AT2G41100.6 | 50.602 | 166 | 50 | 3 | 1 | 134 | 55 | 220 | 5.24e-44 | 145 |
Msa1072470 | AT2G41100.6 | 45.082 | 122 | 51 | 2 | 26 | 131 | 6 | 127 | 6.41e-27 | 101 |
Msa1072470 | AT2G41100.6 | 52.128 | 94 | 27 | 2 | 4 | 82 | 148 | 238 | 7.49e-21 | 85.9 |
Msa1072470 | AT2G41100.3 | 50.602 | 166 | 50 | 3 | 1 | 134 | 55 | 220 | 5.24e-44 | 145 |
Msa1072470 | AT2G41100.3 | 45.082 | 122 | 51 | 2 | 26 | 131 | 6 | 127 | 6.41e-27 | 101 |
Msa1072470 | AT2G41100.3 | 52.128 | 94 | 27 | 2 | 4 | 82 | 148 | 238 | 7.49e-21 | 85.9 |
Msa1072470 | AT2G41100.4 | 50.602 | 166 | 50 | 3 | 1 | 134 | 90 | 255 | 1.48e-43 | 145 |
Msa1072470 | AT2G41100.4 | 45.062 | 162 | 58 | 3 | 1 | 131 | 1 | 162 | 1.39e-37 | 130 |
Msa1072470 | AT2G41100.4 | 52.128 | 94 | 27 | 2 | 4 | 82 | 183 | 273 | 1.35e-20 | 85.5 |
Msa1072470 | AT2G41100.1 | 50.602 | 166 | 50 | 3 | 1 | 134 | 90 | 255 | 1.48e-43 | 145 |
Msa1072470 | AT2G41100.1 | 45.062 | 162 | 58 | 3 | 1 | 131 | 1 | 162 | 1.39e-37 | 130 |
Msa1072470 | AT2G41100.1 | 52.128 | 94 | 27 | 2 | 4 | 82 | 183 | 273 | 1.35e-20 | 85.5 |
Msa1072470 | AT4G14640.3 | 64.078 | 103 | 22 | 1 | 5 | 92 | 6 | 108 | 7.69e-42 | 135 |
Msa1072470 | AT3G22930.2 | 62.857 | 105 | 24 | 1 | 4 | 93 | 27 | 131 | 1.58e-40 | 132 |
Msa1072470 | AT3G22930.2 | 46.774 | 62 | 33 | 0 | 70 | 131 | 35 | 96 | 1.61e-11 | 58.2 |
Msa1072470 | AT3G51920.1 | 45.946 | 148 | 65 | 1 | 1 | 133 | 1 | 148 | 3.64e-37 | 124 |
Msa1072470 | AT1G12310.1 | 42.857 | 147 | 67 | 2 | 3 | 134 | 4 | 148 | 3.18e-36 | 122 |
Msa1072470 | AT1G62820.1 | 42.177 | 147 | 68 | 2 | 3 | 134 | 4 | 148 | 4.00e-36 | 121 |
Msa1072470 | AT2G41100.2 | 52.381 | 126 | 43 | 2 | 26 | 134 | 5 | 130 | 7.47e-34 | 117 |
Msa1072470 | AT2G41100.2 | 52.128 | 94 | 27 | 2 | 4 | 82 | 58 | 148 | 9.58e-22 | 86.3 |
Msa1072470 | AT3G50360.1 | 42.254 | 142 | 67 | 1 | 5 | 131 | 20 | 161 | 4.49e-31 | 109 |
Msa1072470 | AT3G50360.1 | 47.143 | 70 | 37 | 0 | 65 | 134 | 22 | 91 | 6.07e-14 | 65.1 |
Msa1072470 | AT1G32250.1 | 38.158 | 152 | 73 | 2 | 1 | 131 | 5 | 156 | 1.32e-30 | 108 |
Msa1072470 | AT3G03000.1 | 38.356 | 146 | 74 | 2 | 4 | 133 | 12 | 157 | 5.31e-29 | 103 |
Msa1072470 | AT4G37010.2 | 37.324 | 142 | 74 | 1 | 5 | 131 | 24 | 165 | 1.07e-25 | 95.9 |
Msa1072470 | AT4G37010.1 | 37.324 | 142 | 74 | 1 | 5 | 131 | 20 | 161 | 1.14e-25 | 95.5 |
Msa1072470 | AT2G41100.5 | 51.546 | 97 | 29 | 2 | 1 | 82 | 1 | 94 | 1.21e-24 | 92.4 |
Msa1072470 | AT2G41100.5 | 50.649 | 77 | 37 | 1 | 58 | 134 | 1 | 76 | 6.92e-18 | 75.1 |
Msa1072470 | AT1G66400.1 | 39.130 | 138 | 67 | 2 | 12 | 132 | 15 | 152 | 1.42e-24 | 92.4 |
Msa1072470 | AT1G18530.1 | 37.241 | 145 | 68 | 3 | 7 | 131 | 2 | 143 | 1.53e-24 | 92.4 |
Msa1072470 | AT5G37770.1 | 40.288 | 139 | 64 | 3 | 12 | 131 | 17 | 155 | 1.54e-24 | 92.4 |
Msa1072470 | AT5G37770.2 | 40.288 | 139 | 64 | 3 | 12 | 131 | 17 | 155 | 1.54e-24 | 92.4 |
Msa1072470 | AT3G25600.1 | 36.424 | 151 | 73 | 3 | 1 | 131 | 1 | 148 | 6.13e-24 | 90.9 |
Msa1072470 | AT2G43290.1 | 40.278 | 144 | 62 | 5 | 11 | 131 | 64 | 206 | 3.52e-23 | 90.5 |
Msa1072470 | AT1G18210.2 | 37.037 | 135 | 66 | 2 | 12 | 131 | 23 | 153 | 9.84e-23 | 88.2 |
Msa1072470 | AT1G18210.1 | 37.037 | 135 | 66 | 2 | 12 | 131 | 23 | 153 | 9.84e-23 | 88.2 |
Msa1072470 | AT1G24620.1 | 39.286 | 140 | 69 | 2 | 9 | 133 | 34 | 172 | 1.89e-22 | 87.8 |
Msa1072470 | AT4G03290.1 | 39.007 | 141 | 66 | 3 | 11 | 131 | 4 | 144 | 1.96e-22 | 87.0 |
Msa1072470 | AT1G76040.1 | 36.301 | 146 | 76 | 3 | 1 | 131 | 167 | 310 | 9.00e-22 | 88.6 |
Msa1072470 | AT1G76040.4 | 36.301 | 146 | 76 | 3 | 1 | 131 | 167 | 310 | 9.00e-22 | 88.6 |
Msa1072470 | AT3G59440.1 | 39.855 | 138 | 63 | 4 | 12 | 131 | 51 | 186 | 1.03e-21 | 86.3 |
Msa1072470 | AT1G05990.1 | 39.568 | 139 | 66 | 3 | 11 | 131 | 4 | 142 | 2.60e-21 | 84.0 |
Msa1072470 | AT1G76040.2 | 36.301 | 146 | 76 | 3 | 1 | 131 | 405 | 548 | 3.21e-21 | 88.6 |
Msa1072470 | AT1G73630.1 | 34.307 | 137 | 71 | 2 | 12 | 133 | 20 | 152 | 3.12e-20 | 81.6 |
Msa1072470 | AT5G23580.1 | 34.932 | 146 | 77 | 3 | 1 | 131 | 316 | 458 | 2.25e-19 | 83.2 |
Msa1072470 | AT3G10660.2 | 33.562 | 146 | 79 | 3 | 1 | 131 | 480 | 622 | 2.68e-19 | 83.2 |
Msa1072470 | AT3G10660.1 | 33.562 | 146 | 79 | 3 | 1 | 131 | 480 | 622 | 2.68e-19 | 83.2 |
Msa1072470 | AT4G12860.1 | 36.957 | 138 | 70 | 2 | 11 | 131 | 4 | 141 | 3.32e-19 | 78.6 |
Msa1072470 | AT5G12180.1 | 36.735 | 147 | 74 | 4 | 1 | 131 | 367 | 510 | 5.11e-19 | 82.0 |
Msa1072470 | AT3G07490.1 | 38.849 | 139 | 66 | 3 | 11 | 131 | 4 | 141 | 6.34e-19 | 77.8 |
Msa1072470 | AT1G35670.1 | 34.247 | 146 | 78 | 3 | 1 | 131 | 320 | 462 | 6.51e-19 | 82.0 |
Msa1072470 | AT4G21940.1 | 34.899 | 149 | 78 | 4 | 1 | 133 | 395 | 540 | 6.61e-19 | 82.0 |
Msa1072470 | AT4G21940.2 | 34.899 | 149 | 78 | 4 | 1 | 133 | 395 | 540 | 6.90e-19 | 82.0 |
Msa1072470 | AT4G09570.1 | 35.135 | 148 | 74 | 4 | 1 | 131 | 319 | 461 | 1.12e-18 | 81.3 |
Msa1072470 | AT5G19360.1 | 36.054 | 147 | 75 | 4 | 1 | 131 | 362 | 505 | 1.59e-18 | 80.9 |
Msa1072470 | AT5G04870.1 | 32.877 | 146 | 80 | 3 | 1 | 131 | 444 | 586 | 2.57e-18 | 80.1 |
Msa1072470 | AT2G15680.1 | 33.099 | 142 | 78 | 3 | 5 | 131 | 43 | 182 | 2.96e-18 | 77.0 |
Msa1072470 | AT1G74740.1 | 33.557 | 149 | 81 | 4 | 1 | 133 | 353 | 499 | 6.81e-18 | 79.0 |
Msa1072470 | AT4G38230.2 | 32.877 | 146 | 80 | 3 | 1 | 131 | 348 | 490 | 1.25e-17 | 78.2 |
Msa1072470 | AT4G38230.1 | 32.877 | 146 | 80 | 3 | 1 | 131 | 174 | 316 | 1.25e-17 | 77.8 |
Msa1072470 | AT4G23650.1 | 33.784 | 148 | 77 | 4 | 1 | 131 | 372 | 515 | 1.30e-17 | 78.2 |
Msa1072470 | AT4G23650.1 | 43.478 | 69 | 36 | 1 | 67 | 132 | 377 | 445 | 3.28e-11 | 59.7 |
Msa1072470 | AT4G38230.4 | 32.877 | 146 | 80 | 3 | 1 | 131 | 318 | 460 | 1.37e-17 | 78.2 |
Msa1072470 | AT4G38230.3 | 32.877 | 146 | 80 | 3 | 1 | 131 | 318 | 460 | 1.37e-17 | 78.2 |
Msa1072470 | AT3G10190.1 | 37.956 | 137 | 67 | 4 | 12 | 131 | 70 | 205 | 1.57e-17 | 75.5 |
Msa1072470 | AT3G03400.1 | 41.837 | 98 | 54 | 2 | 29 | 124 | 38 | 134 | 2.06e-17 | 73.6 |
Msa1072470 | AT1G61950.1 | 41.667 | 108 | 57 | 3 | 26 | 131 | 433 | 536 | 2.39e-17 | 77.4 |
Msa1072470 | AT3G03410.1 | 35.556 | 135 | 63 | 3 | 14 | 133 | 4 | 129 | 3.02e-17 | 72.8 |
Msa1072470 | AT2G38910.1 | 32.192 | 146 | 81 | 3 | 1 | 131 | 428 | 570 | 3.52e-17 | 77.0 |
Msa1072470 | AT5G17470.1 | 36.765 | 136 | 76 | 4 | 2 | 133 | 10 | 139 | 3.74e-17 | 73.2 |
Msa1072470 | AT5G42380.1 | 37.209 | 129 | 73 | 3 | 6 | 131 | 61 | 184 | 6.14e-17 | 73.6 |
Msa1072470 | AT2G41410.1 | 34.014 | 147 | 79 | 3 | 4 | 132 | 62 | 208 | 6.20e-17 | 73.9 |
Msa1072470 | AT4G04720.2 | 32.886 | 149 | 81 | 4 | 1 | 133 | 373 | 518 | 7.58e-17 | 75.9 |
Msa1072470 | AT4G04720.1 | 32.886 | 149 | 81 | 4 | 1 | 133 | 373 | 518 | 7.58e-17 | 75.9 |
Msa1072470 | AT3G50770.1 | 32.857 | 140 | 74 | 3 | 12 | 131 | 64 | 203 | 9.16e-17 | 73.6 |
Msa1072470 | AT3G50770.1 | 42.647 | 68 | 39 | 0 | 67 | 134 | 61 | 128 | 2.19e-12 | 61.6 |
Msa1072470 | AT2G36180.1 | 41.129 | 124 | 64 | 4 | 12 | 132 | 20 | 137 | 1.05e-16 | 72.0 |
Msa1072470 | AT1G50700.1 | 37.736 | 106 | 64 | 2 | 26 | 131 | 407 | 510 | 1.90e-16 | 74.7 |
Msa1072470 | AT3G20410.2 | 37.736 | 106 | 64 | 2 | 26 | 131 | 425 | 528 | 2.56e-16 | 74.3 |
Msa1072470 | AT3G20410.1 | 37.736 | 106 | 64 | 2 | 26 | 131 | 425 | 528 | 2.56e-16 | 74.3 |
Msa1072470 | AT4G04740.4 | 39.806 | 103 | 58 | 3 | 30 | 131 | 406 | 505 | 3.73e-16 | 73.9 |
Msa1072470 | AT4G04740.6 | 39.806 | 103 | 58 | 3 | 30 | 131 | 406 | 505 | 3.73e-16 | 73.9 |
Msa1072470 | AT4G04740.5 | 39.806 | 103 | 58 | 3 | 30 | 131 | 406 | 505 | 3.73e-16 | 73.9 |
Msa1072470 | AT4G04740.3 | 39.806 | 103 | 58 | 3 | 30 | 131 | 406 | 505 | 3.73e-16 | 73.9 |
Msa1072470 | AT4G04740.1 | 39.806 | 103 | 58 | 3 | 30 | 131 | 406 | 505 | 3.73e-16 | 73.9 |
Msa1072470 | AT4G04740.7 | 39.806 | 103 | 58 | 3 | 30 | 131 | 406 | 505 | 3.73e-16 | 73.9 |
Msa1072470 | AT1G18890.1 | 35.333 | 150 | 77 | 6 | 1 | 133 | 357 | 503 | 1.12e-15 | 72.8 |
Msa1072470 | AT2G17290.1 | 30.822 | 146 | 83 | 3 | 1 | 131 | 379 | 521 | 1.42e-15 | 72.4 |
Msa1072470 | AT2G17290.2 | 30.822 | 146 | 83 | 3 | 1 | 131 | 379 | 521 | 1.42e-15 | 72.4 |
Msa1072470 | AT4G35310.2 | 30.822 | 146 | 83 | 3 | 1 | 131 | 391 | 533 | 1.53e-15 | 72.4 |
Msa1072470 | AT4G35310.1 | 30.822 | 146 | 83 | 3 | 1 | 131 | 391 | 533 | 1.53e-15 | 72.4 |
Msa1072470 | AT5G12480.1 | 30.872 | 149 | 86 | 4 | 1 | 133 | 353 | 500 | 2.28e-15 | 71.6 |
Msa1072470 | AT5G12480.2 | 32.215 | 149 | 84 | 4 | 1 | 133 | 259 | 406 | 2.63e-15 | 71.6 |
Msa1072470 | AT3G57530.1 | 31.293 | 147 | 82 | 4 | 1 | 131 | 357 | 500 | 1.17e-14 | 69.7 |
Msa1072470 | AT1G50700.2 | 32.090 | 134 | 85 | 4 | 1 | 131 | 406 | 536 | 2.43e-14 | 68.9 |
Msa1072470 | AT4G04695.1 | 30.872 | 149 | 84 | 4 | 1 | 133 | 325 | 470 | 2.82e-14 | 68.6 |
Msa1072470 | AT5G19450.2 | 28.188 | 149 | 90 | 2 | 1 | 133 | 351 | 498 | 4.36e-14 | 68.2 |
Msa1072470 | AT5G19450.1 | 28.188 | 149 | 90 | 2 | 1 | 133 | 351 | 498 | 4.36e-14 | 68.2 |
Msa1072470 | AT4G04700.1 | 32.653 | 147 | 80 | 4 | 1 | 131 | 325 | 468 | 5.09e-14 | 67.8 |
Msa1072470 | AT3G51850.1 | 30.137 | 146 | 86 | 2 | 1 | 131 | 348 | 492 | 8.24e-14 | 67.4 |
Msa1072470 | AT4G04710.2 | 30.612 | 147 | 83 | 4 | 1 | 131 | 326 | 469 | 8.85e-13 | 64.3 |
Msa1072470 | AT4G04710.3 | 35.514 | 107 | 65 | 3 | 26 | 131 | 352 | 455 | 1.04e-12 | 64.3 |
Msa1072470 | AT4G04710.1 | 35.514 | 107 | 65 | 3 | 26 | 131 | 379 | 482 | 1.09e-12 | 63.9 |
Msa1072470 | AT2G31500.1 | 31.788 | 151 | 81 | 6 | 1 | 132 | 360 | 507 | 3.61e-12 | 62.8 |
Msa1072470 | AT2G41860.1 | 28.767 | 146 | 88 | 3 | 1 | 131 | 348 | 492 | 7.85e-12 | 61.6 |
Msa1072470 | AT2G41860.2 | 28.767 | 146 | 88 | 3 | 1 | 131 | 348 | 492 | 7.85e-12 | 61.6 |
Msa1072470 | AT4G04710.4 | 30.872 | 149 | 82 | 5 | 1 | 131 | 339 | 484 | 1.34e-11 | 60.8 |
Msa1072470 | AT1G76650.2 | 33.582 | 134 | 75 | 4 | 7 | 131 | 38 | 166 | 8.28e-11 | 57.0 |
Msa1072470 | AT2G17890.1 | 26.974 | 152 | 84 | 6 | 1 | 131 | 404 | 549 | 9.81e-11 | 58.5 |
Find 23 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGCTCTTTCTTTGAAAA+TGG | 0.158851 | 7_2:+69552772 | None:intergenic |
TGCCATAAGGTTTAGAAATT+CGG | 0.219955 | 7_2:+69551477 | None:intergenic |
TCCCGAATTTCTAAACCTTA+TGG | 0.275599 | 7_2:-69551479 | Msa1072470:CDS |
GCCATAAGGTTTAGAAATTC+GGG | 0.288696 | 7_2:+69551478 | None:intergenic |
GCTCTGCCTCTGTTGGATTC+TGG | 0.298067 | 7_2:+69551554 | None:intergenic |
CACCAAGGTTGGTCATTACA+TGG | 0.419223 | 7_2:+69551356 | None:intergenic |
TAATTATGATGAGTTTGTTA+AGG | 0.424704 | 7_2:-69551266 | Msa1072470:CDS |
TTTAGCTTGTTTGATAAAGA+TGG | 0.429618 | 7_2:-69552695 | Msa1072470:CDS |
TCTTGTAGCTCTGCCTCTGT+TGG | 0.445696 | 7_2:+69551547 | None:intergenic |
AGAAAGAGCAACATATCAAA+TGG | 0.475236 | 7_2:-69552762 | Msa1072470:exon |
TGAGTTTGTTAAGGTTATGA+TGG | 0.514750 | 7_2:-69551257 | Msa1072470:CDS |
GTTTGATAATTAATTTCACT+TGG | 0.515900 | 7_2:+69551234 | None:intergenic |
ATTCGAGAGGCTGATGTTGA+TGG | 0.520102 | 7_2:-69551301 | Msa1072470:CDS |
GAAGTAGATGCTGACGGTAA+TGG | 0.522185 | 7_2:-69551514 | Msa1072470:CDS |
CGCCATGTAATGACCAACCT+TGG | 0.550381 | 7_2:-69551358 | Msa1072470:CDS |
AATTTCTAAACCTTATGGCA+AGG | 0.564830 | 7_2:-69551474 | Msa1072470:CDS |
GTGTTCGACAAGGATCAGAA+TGG | 0.579017 | 7_2:-69551403 | Msa1072470:CDS |
GAGGCTGATGTTGATGGTGA+TGG | 0.590807 | 7_2:-69551295 | Msa1072470:CDS |
TTGTTTGATAAAGATGGTGA+TGG | 0.635455 | 7_2:-69552689 | Msa1072470:intron |
AGTTGATGAAATGATTCGAG+AGG | 0.653094 | 7_2:-69551314 | Msa1072470:CDS |
ATAAACGAAGTAGATGCTGA+CGG | 0.684480 | 7_2:-69551520 | Msa1072470:CDS |
AGCGTTTAGAGTGTTCGACA+AGG | 0.713515 | 7_2:-69551413 | Msa1072470:CDS |
ATTAGGCCAGAATCCAACAG+AGG | 0.733821 | 7_2:-69551560 | Msa1072470:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAACAAAAGATATTAT+GGG | + | chr7_2:69551471-69551490 | None:intergenic | 10.0% |
!! | ATTAAAAACAAAAGATATTA+TGG | + | chr7_2:69551472-69551491 | None:intergenic | 10.0% |
!! | ATAATTTCAAAAACTATAAT+TGG | + | chr7_2:69552150-69552169 | None:intergenic | 10.0% |
!!! | AATTATAGTTTTTGAAATTA+TGG | - | chr7_2:69552149-69552168 | Msa1072470:intron | 10.0% |
!! | ATTTGTATATTACAAATAAA+TGG | - | chr7_2:69552199-69552218 | Msa1072470:intron | 10.0% |
!! | TTAAAAACAAAAGATATTAT+GGG | + | chr7_2:69551471-69551490 | None:intergenic | 10.0% |
!! | ATTAAAAACAAAAGATATTA+TGG | + | chr7_2:69551472-69551491 | None:intergenic | 10.0% |
!! | ATAATTTCAAAAACTATAAT+TGG | + | chr7_2:69552150-69552169 | None:intergenic | 10.0% |
!!! | AATTATAGTTTTTGAAATTA+TGG | - | chr7_2:69552149-69552168 | Msa1072470:intron | 10.0% |
!! | ATTTGTATATTACAAATAAA+TGG | - | chr7_2:69552199-69552218 | Msa1072470:intron | 10.0% |
!! | TATATTGAAAAATGTCTAAT+CGG | + | chr7_2:69551545-69551564 | None:intergenic | 15.0% |
!!! | ATTAGACATTTTTCAATATA+GGG | - | chr7_2:69551545-69551564 | Msa1072470:CDS | 15.0% |
!! | TATATTGAAAAATGTCTAAT+CGG | + | chr7_2:69551545-69551564 | None:intergenic | 15.0% |
!!! | ATTAGACATTTTTCAATATA+GGG | - | chr7_2:69551545-69551564 | Msa1072470:CDS | 15.0% |
!! | TGATAATATGCAATAAAAGA+GGG | + | chr7_2:69551429-69551448 | None:intergenic | 20.0% |
!! | ATGATAATATGCAATAAAAG+AGG | + | chr7_2:69551430-69551449 | None:intergenic | 20.0% |
!!! | GATTAGACATTTTTCAATAT+AGG | - | chr7_2:69551544-69551563 | Msa1072470:CDS | 20.0% |
!! | ATAACATTATATGACTTTGA+AGG | - | chr7_2:69552424-69552443 | Msa1072470:intron | 20.0% |
!!! | TAATTATGATGAGTTTGTTA+AGG | - | chr7_2:69552780-69552799 | Msa1072470:five_prime_UTR | 20.0% |
!! | TGATAATATGCAATAAAAGA+GGG | + | chr7_2:69551429-69551448 | None:intergenic | 20.0% |
!! | ATGATAATATGCAATAAAAG+AGG | + | chr7_2:69551430-69551449 | None:intergenic | 20.0% |
!!! | GATTAGACATTTTTCAATAT+AGG | - | chr7_2:69551544-69551563 | Msa1072470:CDS | 20.0% |
!! | ATAACATTATATGACTTTGA+AGG | - | chr7_2:69552424-69552443 | Msa1072470:intron | 20.0% |
!!! | TAATTATGATGAGTTTGTTA+AGG | - | chr7_2:69552780-69552799 | Msa1072470:five_prime_UTR | 20.0% |
!!! | TTTAGCTTGTTTGATAAAGA+TGG | - | chr7_2:69551351-69551370 | Msa1072470:CDS | 25.0% |
! | AAACAAAAGATATTATGGGA+GGG | + | chr7_2:69551467-69551486 | None:intergenic | 25.0% |
! | AAAACAAAAGATATTATGGG+AGG | + | chr7_2:69551468-69551487 | None:intergenic | 25.0% |
! | ACTAATGTAATCATATGTGT+TGG | + | chr7_2:69551600-69551619 | None:intergenic | 25.0% |
!!! | ATCTAATTTTTTTGTGAGGA+GGG | + | chr7_2:69552059-69552078 | None:intergenic | 25.0% |
!!! | AGACATCTAATTTTTTTGTG+AGG | + | chr7_2:69552063-69552082 | None:intergenic | 25.0% |
! | ATAATTGTATCTCCATTCAT+GGG | + | chr7_2:69552116-69552135 | None:intergenic | 25.0% |
! | TATAATTGTATCTCCATTCA+TGG | + | chr7_2:69552117-69552136 | None:intergenic | 25.0% |
!!! | TTTAGCTTGTTTGATAAAGA+TGG | - | chr7_2:69551351-69551370 | Msa1072470:CDS | 25.0% |
! | AAACAAAAGATATTATGGGA+GGG | + | chr7_2:69551467-69551486 | None:intergenic | 25.0% |
! | AAAACAAAAGATATTATGGG+AGG | + | chr7_2:69551468-69551487 | None:intergenic | 25.0% |
! | ACTAATGTAATCATATGTGT+TGG | + | chr7_2:69551600-69551619 | None:intergenic | 25.0% |
!!! | ATCTAATTTTTTTGTGAGGA+GGG | + | chr7_2:69552059-69552078 | None:intergenic | 25.0% |
!!! | AGACATCTAATTTTTTTGTG+AGG | + | chr7_2:69552063-69552082 | None:intergenic | 25.0% |
! | ATAATTGTATCTCCATTCAT+GGG | + | chr7_2:69552116-69552135 | None:intergenic | 25.0% |
! | TATAATTGTATCTCCATTCA+TGG | + | chr7_2:69552117-69552136 | None:intergenic | 25.0% |
! | TGTTGCTCTTTCTTTGAAAA+TGG | + | chr7_2:69551277-69551296 | None:intergenic | 30.0% |
AGAAAGAGCAACATATCAAA+TGG | - | chr7_2:69551284-69551303 | Msa1072470:CDS | 30.0% | |
TTGTTTGATAAAGATGGTGA+TGG | - | chr7_2:69551357-69551376 | Msa1072470:CDS | 30.0% | |
TAATATGCAATAAAAGAGGG+AGG | + | chr7_2:69551426-69551445 | None:intergenic | 30.0% | |
GTCTCAAAAGAGAAGTTTAA+AGG | - | chr7_2:69551796-69551815 | Msa1072470:intron | 30.0% | |
! | TCGAATATAAGACTTTTGCT+TGG | + | chr7_2:69551960-69551979 | None:intergenic | 30.0% |
!!! | CATCTAATTTTTTTGTGAGG+AGG | + | chr7_2:69552060-69552079 | None:intergenic | 30.0% |
TGTAAAAAATTGCCCATGAA+TGG | - | chr7_2:69552101-69552120 | Msa1072470:intron | 30.0% | |
! | ACATCTTCAATTTGAAGTGT+TGG | + | chr7_2:69552251-69552270 | None:intergenic | 30.0% |
CACTTCAAATTGAAGATGTA+TGG | - | chr7_2:69552252-69552271 | Msa1072470:intron | 30.0% | |
ATTTAGTGTCATGTATGTGT+CGG | + | chr7_2:69552285-69552304 | None:intergenic | 30.0% | |
ATACATGACACTAAATCATG+CGG | - | chr7_2:69552289-69552308 | Msa1072470:intron | 30.0% | |
TGCCATAAGGTTTAGAAATT+CGG | + | chr7_2:69552572-69552591 | None:intergenic | 30.0% | |
AATTTCTAAACCTTATGGCA+AGG | - | chr7_2:69552572-69552591 | Msa1072470:intron | 30.0% | |
!! | TGAGTTTGTTAAGGTTATGA+TGG | - | chr7_2:69552789-69552808 | Msa1072470:five_prime_UTR | 30.0% |
! | TGTTGCTCTTTCTTTGAAAA+TGG | + | chr7_2:69551277-69551296 | None:intergenic | 30.0% |
AGAAAGAGCAACATATCAAA+TGG | - | chr7_2:69551284-69551303 | Msa1072470:CDS | 30.0% | |
TTGTTTGATAAAGATGGTGA+TGG | - | chr7_2:69551357-69551376 | Msa1072470:CDS | 30.0% | |
TAATATGCAATAAAAGAGGG+AGG | + | chr7_2:69551426-69551445 | None:intergenic | 30.0% | |
GTCTCAAAAGAGAAGTTTAA+AGG | - | chr7_2:69551796-69551815 | Msa1072470:intron | 30.0% | |
! | TCGAATATAAGACTTTTGCT+TGG | + | chr7_2:69551960-69551979 | None:intergenic | 30.0% |
!!! | CATCTAATTTTTTTGTGAGG+AGG | + | chr7_2:69552060-69552079 | None:intergenic | 30.0% |
TGTAAAAAATTGCCCATGAA+TGG | - | chr7_2:69552101-69552120 | Msa1072470:intron | 30.0% | |
! | ACATCTTCAATTTGAAGTGT+TGG | + | chr7_2:69552251-69552270 | None:intergenic | 30.0% |
CACTTCAAATTGAAGATGTA+TGG | - | chr7_2:69552252-69552271 | Msa1072470:intron | 30.0% | |
ATTTAGTGTCATGTATGTGT+CGG | + | chr7_2:69552285-69552304 | None:intergenic | 30.0% | |
ATACATGACACTAAATCATG+CGG | - | chr7_2:69552289-69552308 | Msa1072470:intron | 30.0% | |
TGCCATAAGGTTTAGAAATT+CGG | + | chr7_2:69552572-69552591 | None:intergenic | 30.0% | |
AATTTCTAAACCTTATGGCA+AGG | - | chr7_2:69552572-69552591 | Msa1072470:intron | 30.0% | |
!! | TGAGTTTGTTAAGGTTATGA+TGG | - | chr7_2:69552789-69552808 | Msa1072470:five_prime_UTR | 30.0% |
AAAGAGGGAGGAAAAATGAA+CGG | + | chr7_2:69551414-69551433 | None:intergenic | 35.0% | |
ACATACTCTGACATAGAAAC+CGG | + | chr7_2:69551686-69551705 | None:intergenic | 35.0% | |
!! | CTTCAATTTGAAGTGTTGGT+CGG | + | chr7_2:69552247-69552266 | None:intergenic | 35.0% |
TCAAATTGAAGATGTATGGC+CGG | - | chr7_2:69552256-69552275 | Msa1072470:intron | 35.0% | |
ATAAACGAAGTAGATGCTGA+CGG | - | chr7_2:69552526-69552545 | Msa1072470:intron | 35.0% | |
TCCCGAATTTCTAAACCTTA+TGG | - | chr7_2:69552567-69552586 | Msa1072470:intron | 35.0% | |
GCCATAAGGTTTAGAAATTC+GGG | + | chr7_2:69552571-69552590 | None:intergenic | 35.0% | |
! | CTTTCATTTTCCTTGCCATA+AGG | + | chr7_2:69552585-69552604 | None:intergenic | 35.0% |
!! | AGTTGATGAAATGATTCGAG+AGG | - | chr7_2:69552732-69552751 | Msa1072470:CDS | 35.0% |
AAAGAGGGAGGAAAAATGAA+CGG | + | chr7_2:69551414-69551433 | None:intergenic | 35.0% | |
ACATACTCTGACATAGAAAC+CGG | + | chr7_2:69551686-69551705 | None:intergenic | 35.0% | |
!! | CTTCAATTTGAAGTGTTGGT+CGG | + | chr7_2:69552247-69552266 | None:intergenic | 35.0% |
TCAAATTGAAGATGTATGGC+CGG | - | chr7_2:69552256-69552275 | Msa1072470:intron | 35.0% | |
ATAAACGAAGTAGATGCTGA+CGG | - | chr7_2:69552526-69552545 | Msa1072470:intron | 35.0% | |
TCCCGAATTTCTAAACCTTA+TGG | - | chr7_2:69552567-69552586 | Msa1072470:intron | 35.0% | |
GCCATAAGGTTTAGAAATTC+GGG | + | chr7_2:69552571-69552590 | None:intergenic | 35.0% | |
! | CTTTCATTTTCCTTGCCATA+AGG | + | chr7_2:69552585-69552604 | None:intergenic | 35.0% |
!! | AGTTGATGAAATGATTCGAG+AGG | - | chr7_2:69552732-69552751 | Msa1072470:CDS | 35.0% |
TCAGAGTATGTACGTCAATG+CGG | - | chr7_2:69551695-69551714 | Msa1072470:intron | 40.0% | |
TCCAGTGTTCTTGATTGTGT+CGG | - | chr7_2:69552377-69552396 | Msa1072470:intron | 40.0% | |
TGAAGGTTCCATCACAACAA+AGG | - | chr7_2:69552441-69552460 | Msa1072470:intron | 40.0% | |
! | AGTAAGCTTTTCACCAAGGT+TGG | + | chr7_2:69552704-69552723 | None:intergenic | 40.0% |
TCAGAGTATGTACGTCAATG+CGG | - | chr7_2:69551695-69551714 | Msa1072470:intron | 40.0% | |
TCCAGTGTTCTTGATTGTGT+CGG | - | chr7_2:69552377-69552396 | Msa1072470:intron | 40.0% | |
TGAAGGTTCCATCACAACAA+AGG | - | chr7_2:69552441-69552460 | Msa1072470:intron | 40.0% | |
! | AGTAAGCTTTTCACCAAGGT+TGG | + | chr7_2:69552704-69552723 | None:intergenic | 40.0% |
! | TCAATGTCGTGACTTGTGAC+CGG | - | chr7_2:69551664-69551683 | Msa1072470:intron | 45.0% |
TCCGACACAATCAAGAACAC+TGG | + | chr7_2:69552381-69552400 | None:intergenic | 45.0% | |
TCCATCACAACAAAGGAGCT+TGG | - | chr7_2:69552448-69552467 | Msa1072470:intron | 45.0% | |
! | TCCAAGCTCCTTTGTTGTGA+TGG | + | chr7_2:69552452-69552471 | None:intergenic | 45.0% |
ATTAGGCCAGAATCCAACAG+AGG | - | chr7_2:69552486-69552505 | Msa1072470:intron | 45.0% | |
GAAGTAGATGCTGACGGTAA+TGG | - | chr7_2:69552532-69552551 | Msa1072470:intron | 45.0% | |
! | AGCGTTTAGAGTGTTCGACA+AGG | - | chr7_2:69552633-69552652 | Msa1072470:intron | 45.0% |
GTGTTCGACAAGGATCAGAA+TGG | - | chr7_2:69552643-69552662 | Msa1072470:intron | 45.0% | |
! | CACCAAGGTTGGTCATTACA+TGG | + | chr7_2:69552693-69552712 | None:intergenic | 45.0% |
! | CGTCAGTAAGCTTTTCACCA+AGG | + | chr7_2:69552708-69552727 | None:intergenic | 45.0% |
ATTCGAGAGGCTGATGTTGA+TGG | - | chr7_2:69552745-69552764 | Msa1072470:CDS | 45.0% | |
! | TCAATGTCGTGACTTGTGAC+CGG | - | chr7_2:69551664-69551683 | Msa1072470:intron | 45.0% |
TCCGACACAATCAAGAACAC+TGG | + | chr7_2:69552381-69552400 | None:intergenic | 45.0% | |
TCCATCACAACAAAGGAGCT+TGG | - | chr7_2:69552448-69552467 | Msa1072470:intron | 45.0% | |
! | TCCAAGCTCCTTTGTTGTGA+TGG | + | chr7_2:69552452-69552471 | None:intergenic | 45.0% |
ATTAGGCCAGAATCCAACAG+AGG | - | chr7_2:69552486-69552505 | Msa1072470:intron | 45.0% | |
GAAGTAGATGCTGACGGTAA+TGG | - | chr7_2:69552532-69552551 | Msa1072470:intron | 45.0% | |
! | AGCGTTTAGAGTGTTCGACA+AGG | - | chr7_2:69552633-69552652 | Msa1072470:intron | 45.0% |
GTGTTCGACAAGGATCAGAA+TGG | - | chr7_2:69552643-69552662 | Msa1072470:intron | 45.0% | |
! | CACCAAGGTTGGTCATTACA+TGG | + | chr7_2:69552693-69552712 | None:intergenic | 45.0% |
! | CGTCAGTAAGCTTTTCACCA+AGG | + | chr7_2:69552708-69552727 | None:intergenic | 45.0% |
ATTCGAGAGGCTGATGTTGA+TGG | - | chr7_2:69552745-69552764 | Msa1072470:CDS | 45.0% | |
GGTTGCACTAGCATTGCGAT+TGG | - | chr7_2:69552170-69552189 | Msa1072470:intron | 50.0% | |
GTCATGTATGTGTCGGACAC+CGG | + | chr7_2:69552278-69552297 | None:intergenic | 50.0% | |
GGAACCGTGATGAGGTCATT+AGG | - | chr7_2:69552469-69552488 | Msa1072470:intron | 50.0% | |
CTGGCCTAATGACCTCATCA+CGG | + | chr7_2:69552476-69552495 | None:intergenic | 50.0% | |
! | TCTTGTAGCTCTGCCTCTGT+TGG | + | chr7_2:69552502-69552521 | None:intergenic | 50.0% |
CGCCATGTAATGACCAACCT+TGG | - | chr7_2:69552688-69552707 | Msa1072470:intron | 50.0% | |
!! | GAGGCTGATGTTGATGGTGA+TGG | - | chr7_2:69552751-69552770 | Msa1072470:exon | 50.0% |
GGTTGCACTAGCATTGCGAT+TGG | - | chr7_2:69552170-69552189 | Msa1072470:intron | 50.0% | |
GTCATGTATGTGTCGGACAC+CGG | + | chr7_2:69552278-69552297 | None:intergenic | 50.0% | |
GGAACCGTGATGAGGTCATT+AGG | - | chr7_2:69552469-69552488 | Msa1072470:intron | 50.0% | |
CTGGCCTAATGACCTCATCA+CGG | + | chr7_2:69552476-69552495 | None:intergenic | 50.0% | |
! | TCTTGTAGCTCTGCCTCTGT+TGG | + | chr7_2:69552502-69552521 | None:intergenic | 50.0% |
CGCCATGTAATGACCAACCT+TGG | - | chr7_2:69552688-69552707 | Msa1072470:intron | 50.0% | |
!! | GAGGCTGATGTTGATGGTGA+TGG | - | chr7_2:69552751-69552770 | Msa1072470:exon | 50.0% |
AGGAGCTTGGAACCGTGATG+AGG | - | chr7_2:69552461-69552480 | Msa1072470:intron | 55.0% | |
GCTCTGCCTCTGTTGGATTC+TGG | + | chr7_2:69552495-69552514 | None:intergenic | 55.0% | |
AGGAGCTTGGAACCGTGATG+AGG | - | chr7_2:69552461-69552480 | Msa1072470:intron | 55.0% | |
GCTCTGCCTCTGTTGGATTC+TGG | + | chr7_2:69552495-69552514 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 69551249 | 69552819 | 69551249 | ID=Msa1072470;Name=Msa1072470 |
chr7_2 | mRNA | 69551249 | 69552819 | 69551249 | ID=Msa1072470-mRNA-1;Parent=Msa1072470;Name=Msa1072470-mRNA-1;_AED=0.12;_eAED=0.13;_QI=54|0|0.5|1|1|1|2|0|134 |
chr7_2 | exon | 69551249 | 69551577 | 69551249 | ID=Msa1072470-mRNA-1:exon:15480;Parent=Msa1072470-mRNA-1 |
chr7_2 | exon | 69552690 | 69552819 | 69552690 | ID=Msa1072470-mRNA-1:exon:15479;Parent=Msa1072470-mRNA-1 |
chr7_2 | five_prime_UTR | 69552766 | 69552819 | 69552766 | ID=Msa1072470-mRNA-1:five_prime_utr;Parent=Msa1072470-mRNA-1 |
chr7_2 | CDS | 69552690 | 69552765 | 69552690 | ID=Msa1072470-mRNA-1:cds;Parent=Msa1072470-mRNA-1 |
chr7_2 | CDS | 69551249 | 69551577 | 69551249 | ID=Msa1072470-mRNA-1:cds;Parent=Msa1072470-mRNA-1 |
Gene Sequence |
Protein sequence |