Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0468050 | Msa1073430 | -0.806465 | 8.119419e-50 | -8.615850e-47 |
Msa1033500 | Msa1073430 | 0.940901 | 1.052950e-100 | -8.615850e-47 |
Msa1073430 | Msa1160340 | 0.819028 | 1.439930e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 156 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGATGACCTTATCATTTC+TGG | 0.104924 | 7_2:-70963487 | Msa1073430:three_prime_UTR |
CTAGAGGTATTTGCATAAAT+TGG | 0.110428 | 7_2:+70963137 | None:intergenic |
TACCGATACTGTCGAAAATT+TGG | 0.129844 | 7_2:-70964175 | Msa1073430:three_prime_UTR |
CAAAGAACTTGAAGCTTCTT+TGG | 0.134487 | 7_2:-70967056 | Msa1073430:CDS |
CTTTGCTTCGGTTGTGAAAA+TGG | 0.159217 | 7_2:-70963824 | Msa1073430:three_prime_UTR |
CAACTTGATAGAAGCAATTT+TGG | 0.167888 | 7_2:+70964137 | None:intergenic |
AACTGCTGAACCTTGGGGTT+GGG | 0.173713 | 7_2:-70962528 | Msa1073430:three_prime_UTR |
CTGCAGCATGTATGCTTCTA+TGG | 0.184833 | 7_2:+70962652 | None:intergenic |
TGAAATTACCTCCCGGTTTC+AGG | 0.188693 | 7_2:-70963693 | Msa1073430:three_prime_UTR |
CTCACAAATATATATACTTA+TGG | 0.229255 | 7_2:+70962618 | None:intergenic |
ATCAAGTTCACCATGTAAAA+AGG | 0.245252 | 7_2:+70963729 | None:intergenic |
TTTGATGCAGAATAGCTATT+TGG | 0.255258 | 7_2:-70965177 | Msa1073430:intron |
TCAAACGTTCATACTGAAAT+AGG | 0.265836 | 7_2:+70965005 | None:intergenic |
CACTCTGAAGGAAGGTAATC+TGG | 0.290757 | 7_2:+70966968 | None:intergenic |
AAGATGATGGTTCTGATCTA+AGG | 0.298246 | 7_2:+70963276 | None:intergenic |
AATTGCTTCTATCAAGTTGC+AGG | 0.332604 | 7_2:-70964133 | Msa1073430:three_prime_UTR |
ATAAATGGCACAGAAAATTA+AGG | 0.333731 | 7_2:-70965409 | Msa1073430:intron |
GTATGAACGTTTGATGGTTC+AGG | 0.334072 | 7_2:-70964996 | Msa1073430:intron |
TATTCCAATTGTATCTCCTT+TGG | 0.334438 | 7_2:-70964261 | Msa1073430:three_prime_UTR |
CTCATTGTAGTTTCAATTGT+AGG | 0.337375 | 7_2:+70964304 | None:intergenic |
AAAGTGGAAATAGCTGTTAA+AGG | 0.340111 | 7_2:+70967118 | None:intergenic |
ATTTCAGTATGAACGTTTGA+TGG | 0.343025 | 7_2:-70965002 | Msa1073430:exon |
ACATGGAACTGCTGAACCTT+GGG | 0.343547 | 7_2:-70962534 | Msa1073430:three_prime_UTR |
ACTTTCTTATTCTGTTCATA+TGG | 0.350001 | 7_2:-70963164 | Msa1073430:three_prime_UTR |
ATTTGTGAGGTGGGGATCAT+TGG | 0.352311 | 7_2:-70962604 | Msa1073430:three_prime_UTR |
ATTGAGGCTCTTGTAAATAA+TGG | 0.354291 | 7_2:-70963890 | Msa1073430:three_prime_UTR |
ACTGCTGAACCTTGGGGTTG+GGG | 0.354627 | 7_2:-70962527 | Msa1073430:three_prime_UTR |
AATTGAAACTACAATGAGTT+TGG | 0.363964 | 7_2:-70964299 | Msa1073430:three_prime_UTR |
GAAAATTAAGGCAGGCAATC+AGG | 0.364436 | 7_2:-70965397 | Msa1073430:CDS |
ACCGATACTGTCGAAAATTT+GGG | 0.367071 | 7_2:-70964174 | Msa1073430:three_prime_UTR |
GAACTGCTGAACCTTGGGGT+TGG | 0.381522 | 7_2:-70962529 | Msa1073430:three_prime_UTR |
TAGAGGTATTTGCATAAATT+GGG | 0.396175 | 7_2:+70963138 | None:intergenic |
ACTTGACTAGGCACTCTAAC+TGG | 0.400395 | 7_2:-70962986 | Msa1073430:three_prime_UTR |
CATATCGAAGCTGGGTTGTT+GGG | 0.402320 | 7_2:-70963319 | Msa1073430:three_prime_UTR |
TGAACAGAATAAGAAAGTTC+TGG | 0.406581 | 7_2:+70963169 | None:intergenic |
TGATCTAAGGGAAAATTAAC+AGG | 0.407173 | 7_2:+70963289 | None:intergenic |
TAGTGATCCGGATTGGAAAC+TGG | 0.407536 | 7_2:+70963235 | None:intergenic |
TAACAGCAGGTGGCATATCA+TGG | 0.413187 | 7_2:+70964220 | None:intergenic |
GTTGTATGTGTTAGTTTATG+TGG | 0.414087 | 7_2:-70963506 | Msa1073430:three_prime_UTR |
AGTATATATATTTGTGAGGT+GGG | 0.416189 | 7_2:-70962613 | Msa1073430:three_prime_UTR |
TCACAAATATATATACTTAT+GGG | 0.416596 | 7_2:+70962619 | None:intergenic |
TCGGGAACTCACCTATCTCT+TGG | 0.419869 | 7_2:-70962949 | Msa1073430:three_prime_UTR |
ATCTCTATACGTCTTGAAAC+AGG | 0.422311 | 7_2:-70963635 | Msa1073430:three_prime_UTR |
CAGGACATCTACACCAAATC+AGG | 0.424348 | 7_2:-70963674 | Msa1073430:three_prime_UTR |
CGCTATCTCAAGGGAGATCC+CGG | 0.425796 | 7_2:-70963082 | Msa1073430:three_prime_UTR |
GCATTGGAAATTTCACCAAA+TGG | 0.432398 | 7_2:-70963764 | Msa1073430:three_prime_UTR |
TTATCGTGAAACCTTTGCTT+CGG | 0.436925 | 7_2:-70963836 | Msa1073430:three_prime_UTR |
TGGTGTAGATGTCCTGAAAC+CGG | 0.439241 | 7_2:+70963681 | None:intergenic |
TTGGTCTGCTTAACTGTCAC+TGG | 0.444571 | 7_2:-70963193 | Msa1073430:three_prime_UTR |
TCAGAACCATCATCTTCCTT+TGG | 0.444741 | 7_2:-70963269 | Msa1073430:three_prime_UTR |
CATCATCTTCCTTTGGCCAC+TGG | 0.445427 | 7_2:-70963262 | Msa1073430:three_prime_UTR |
AGATCCAAAGGAGATACAAT+TGG | 0.452038 | 7_2:+70964257 | None:intergenic |
CGTTGTTGCCAGAAATGATA+AGG | 0.456222 | 7_2:+70963479 | None:intergenic |
CACATGGAACTGCTGAACCT+TGG | 0.460427 | 7_2:-70962535 | Msa1073430:three_prime_UTR |
TTCTTATTCTGTTCATATGG+TGG | 0.463788 | 7_2:-70963161 | Msa1073430:three_prime_UTR |
CTCTTGTAAATAATGGCACT+TGG | 0.464768 | 7_2:-70963883 | Msa1073430:three_prime_UTR |
TCATATCGAAGCTGGGTTGT+TGG | 0.465348 | 7_2:-70963320 | Msa1073430:three_prime_UTR |
AAGTGGAAATAGCTGTTAAA+GGG | 0.466714 | 7_2:+70967119 | None:intergenic |
TTGGTGAAATTTCCAATGCT+TGG | 0.468161 | 7_2:+70963768 | None:intergenic |
CACATTATACTGCAAGGCAT+TGG | 0.468741 | 7_2:+70965043 | None:intergenic |
ACTTGATCTCATATCGAAGC+TGG | 0.471426 | 7_2:-70963328 | Msa1073430:three_prime_UTR |
GGAGATACAATTGGAATAGC+AGG | 0.479008 | 7_2:+70964266 | None:intergenic |
GTTGCAATGACGGACATAGA+AGG | 0.485188 | 7_2:+70965151 | None:intergenic |
AGGCACTGTGAACATCCATT+TGG | 0.488127 | 7_2:+70963749 | None:intergenic |
TCGTGTTGTTCGCTATCTCA+AGG | 0.488277 | 7_2:-70963092 | Msa1073430:three_prime_UTR |
TTCTCGGCATTGAGGTGGCT+CGG | 0.489328 | 7_2:-70963389 | Msa1073430:three_prime_UTR |
CGTATAGAGATTTGCGCAAG+CGG | 0.490837 | 7_2:+70963647 | None:intergenic |
GATGCAGAATAGCTATTTGG+TGG | 0.493646 | 7_2:-70965174 | Msa1073430:intron |
CCTCTGCTGAGGCAGAATCT+TGG | 0.494529 | 7_2:-70962895 | Msa1073430:three_prime_UTR |
TTGGAGAAGAATACCTTGGC+CGG | 0.495154 | 7_2:+70963063 | None:intergenic |
TGGAATTCCAGTTTCCAATC+CGG | 0.496951 | 7_2:-70963242 | Msa1073430:three_prime_UTR |
TACTGCTTCGTCACGTCCTG+CGG | 0.497560 | 7_2:-70964064 | Msa1073430:three_prime_UTR |
ATAGAGTTATGTTGCAATGA+TGG | 0.497789 | 7_2:+70965107 | None:intergenic |
GACAGCTTCAGCTAAGGTTG+AGG | 0.502320 | 7_2:+70963949 | None:intergenic |
CTGTTGCTGCTGCCAAGCAT+TGG | 0.503199 | 7_2:-70963780 | Msa1073430:three_prime_UTR |
CGAAGCAGTAGAACAATTTG+AGG | 0.503860 | 7_2:+70964077 | None:intergenic |
TTGACATGAGAGAATTCCAT+TGG | 0.506280 | 7_2:+70963362 | None:intergenic |
GTTGCAATGATGGACATAGA+AGG | 0.508431 | 7_2:+70965117 | None:intergenic |
AACTCAAAAGCGCTCTGCTA+CGG | 0.508730 | 7_2:-70963591 | Msa1073430:three_prime_UTR |
TAGAAGACTAGTAGGTCGTT+TGG | 0.513566 | 7_2:-70963212 | Msa1073430:three_prime_UTR |
CTGCTGAACCTTGGGGTTGG+GGG | 0.518899 | 7_2:-70962526 | Msa1073430:three_prime_UTR |
ACTAGTCTTCTATAGTGATC+CGG | 0.519526 | 7_2:+70963223 | None:intergenic |
GGACAAGTTGCCACTTGACT+AGG | 0.520098 | 7_2:-70962998 | Msa1073430:three_prime_UTR |
ACAGTAAGAATGTTTCTCGC+TGG | 0.520531 | 7_2:-70963860 | Msa1073430:three_prime_UTR |
TTTGAAGATCACAATCAGCT+TGG | 0.521582 | 7_2:+70963044 | None:intergenic |
GACTAGGCACTCTAACTGGA+TGG | 0.521716 | 7_2:-70962982 | Msa1073430:three_prime_UTR |
TGTCATGCAGCTGGAAATTG+AGG | 0.522505 | 7_2:-70963906 | Msa1073430:three_prime_UTR |
AAATTTATGCCTGTGTGACT+CGG | 0.527660 | 7_2:-70963024 | Msa1073430:three_prime_UTR |
TATGCCTGTGTGACTCGGAT+TGG | 0.529171 | 7_2:-70963019 | Msa1073430:three_prime_UTR |
AACCTTAGCTGAAGCTGTCA+AGG | 0.530835 | 7_2:-70963945 | Msa1073430:three_prime_UTR |
AGCTGTTAAAGGGAGCGGTT+CGG | 0.531683 | 7_2:+70967129 | None:intergenic |
AACAGCAGGTGGCATATCAT+GGG | 0.533367 | 7_2:+70964221 | None:intergenic |
TCTTCTATAGTGATCCGGAT+TGG | 0.534462 | 7_2:+70963228 | None:intergenic |
GCTTTGTAAAACTGTGAAAG+TGG | 0.538687 | 7_2:+70967102 | None:intergenic |
TGCAGCATGTATGCTTCTAT+GGG | 0.539490 | 7_2:+70962653 | None:intergenic |
ATCCTTGACAGCTTCAGCTA+AGG | 0.540620 | 7_2:+70963943 | None:intergenic |
GCATATCTTAGAGATGGTAT+TGG | 0.542046 | 7_2:+70964101 | None:intergenic |
ACTGCTTCGTCACGTCCTGC+GGG | 0.544126 | 7_2:-70964063 | Msa1073430:intron |
GAAAGTGAAAATGTTGTAAG+TGG | 0.545195 | 7_2:+70967007 | None:intergenic |
CAAGACAACTTGTTGCATGT+TGG | 0.547469 | 7_2:+70962922 | None:intergenic |
TAAGGCAGGCAATCAGGCTA+AGG | 0.548461 | 7_2:-70965391 | Msa1073430:CDS |
TTGTTTACCTTGCACTCTGA+AGG | 0.549553 | 7_2:+70966956 | None:intergenic |
AGATGATGGTTCTGATCTAA+GGG | 0.550459 | 7_2:+70963277 | None:intergenic |
AACATAACTCTATGCTTGAA+TGG | 0.556096 | 7_2:-70965097 | Msa1073430:CDS |
ATGGTGAATTGTCATGCAGC+TGG | 0.557079 | 7_2:-70963915 | Msa1073430:three_prime_UTR |
CGTGTTGTTCGCTATCTCAA+GGG | 0.559601 | 7_2:-70963091 | Msa1073430:three_prime_UTR |
TTACCTTCCTTCAGAGTGCA+AGG | 0.559788 | 7_2:-70966963 | Msa1073430:intron |
TGAAACAGGCACCTCGATGT+TGG | 0.560240 | 7_2:-70963621 | Msa1073430:three_prime_UTR |
TGGAGAAGAATACCTTGGCC+GGG | 0.566302 | 7_2:+70963064 | None:intergenic |
GATCACTATAGAAGACTAGT+AGG | 0.567578 | 7_2:-70963220 | Msa1073430:three_prime_UTR |
GGTGTAGATGTCCTGAAACC+GGG | 0.567800 | 7_2:+70963682 | None:intergenic |
ATAGAGTTATGTTGCAATGA+CGG | 0.570494 | 7_2:+70965141 | None:intergenic |
ACTCTGAAGGAAGGTAATCT+GGG | 0.574191 | 7_2:+70966969 | None:intergenic |
ATGAAAGCATGTGCTCAAGT+AGG | 0.574772 | 7_2:+70963440 | None:intergenic |
CTTGATCTCATATCGAAGCT+GGG | 0.575266 | 7_2:-70963327 | Msa1073430:three_prime_UTR |
TTACCTTGCACTCTGAAGGA+AGG | 0.577378 | 7_2:+70966960 | None:intergenic |
TGTCTTGCGTTCCTCTGCTG+AGG | 0.578261 | 7_2:-70962906 | Msa1073430:three_prime_UTR |
GAAGCAGTAGAACAATTTGA+GGG | 0.578294 | 7_2:+70964078 | None:intergenic |
GAGGTGGCTCGGAGTGCCAA+TGG | 0.581445 | 7_2:-70963378 | Msa1073430:three_prime_UTR |
AAAAGCGCTCTGCTACGGTA+TGG | 0.582687 | 7_2:-70963586 | Msa1073430:three_prime_UTR |
TGAGGGGCATATCTTAGAGA+TGG | 0.583149 | 7_2:+70964095 | None:intergenic |
CACTCTCACATTATACTGCA+AGG | 0.583183 | 7_2:+70965037 | None:intergenic |
CTCATGTGAAGAAGATCCAA+AGG | 0.584080 | 7_2:+70964245 | None:intergenic |
CAGTGGCCAAAGGAAGATGA+TGG | 0.586428 | 7_2:+70963263 | None:intergenic |
CTCAAGGGAGATCCCGGCCA+AGG | 0.586447 | 7_2:-70963076 | Msa1073430:three_prime_UTR |
AAGTATATATATTTGTGAGG+TGG | 0.588341 | 7_2:-70962614 | Msa1073430:three_prime_UTR |
AGTTAGAGTGCCTAGTCAAG+TGG | 0.590900 | 7_2:+70962988 | None:intergenic |
ATGGCACAGAAAATTAAGGC+AGG | 0.593953 | 7_2:-70965405 | Msa1073430:intron |
CAAGGCATTGGAGACATGAG+AGG | 0.597150 | 7_2:+70965055 | None:intergenic |
GAAATAGCTGTTAAAGGGAG+CGG | 0.598774 | 7_2:+70967124 | None:intergenic |
AGAAGCATACATGCTGCAGA+TGG | 0.600485 | 7_2:-70962648 | Msa1073430:three_prime_UTR |
TTTACATTACACATTGCACA+TGG | 0.601519 | 7_2:-70962551 | Msa1073430:three_prime_UTR |
CAGCTTGGAGAAGAATACCT+TGG | 0.603159 | 7_2:+70963059 | None:intergenic |
ACTAGGCACTCTAACTGGAT+GGG | 0.607942 | 7_2:-70962981 | Msa1073430:three_prime_UTR |
GCGTTCTAGTGCTCTTCTAG+AGG | 0.612495 | 7_2:+70963121 | None:intergenic |
AACGTTCATACTGAAATAGG+TGG | 0.613062 | 7_2:+70965008 | None:intergenic |
GTATATATATTTGTGAGGTG+GGG | 0.619111 | 7_2:-70962612 | Msa1073430:three_prime_UTR |
ACTGGAATTCCAGTGGCCAA+AGG | 0.624998 | 7_2:+70963253 | None:intergenic |
CCAAGATTCTGCCTCAGCAG+AGG | 0.629953 | 7_2:+70962895 | None:intergenic |
CATGGAACTGCTGAACCTTG+GGG | 0.630810 | 7_2:-70962533 | Msa1073430:three_prime_UTR |
CATAAGTATATATATTTGTG+AGG | 0.633246 | 7_2:-70962617 | Msa1073430:three_prime_UTR |
AAGGCATTGGAGACATGAGA+GGG | 0.634063 | 7_2:+70965056 | None:intergenic |
GTATATATGAAATTACCTCC+CGG | 0.636083 | 7_2:-70963700 | Msa1073430:three_prime_UTR |
TTGTCCAATCCGAGTCACAC+AGG | 0.644821 | 7_2:+70963015 | None:intergenic |
GCTGCATGACAATTCACCAT+CGG | 0.652563 | 7_2:+70963918 | None:intergenic |
ACTGTCGAAAATTTGGGACG+TGG | 0.655059 | 7_2:-70964168 | Msa1073430:three_prime_UTR |
ATTGGAAACTGGAATTCCAG+TGG | 0.659775 | 7_2:+70963246 | None:intergenic |
AAGCTGTCAAGGATATCCGA+TGG | 0.660825 | 7_2:-70963934 | Msa1073430:three_prime_UTR |
TGAGGCAGAATCTTGGCATG+AGG | 0.666328 | 7_2:-70962888 | Msa1073430:three_prime_UTR |
GATACAATTGGAATAGCAGG+TGG | 0.673598 | 7_2:+70964269 | None:intergenic |
AAGTGTGAATCTTGACACGA+AGG | 0.678143 | 7_2:-70965367 | Msa1073430:intron |
CTTGCAGTATAATGTGAGAG+TGG | 0.694938 | 7_2:-70965036 | Msa1073430:CDS |
TCTTGGCATGAGGTTCGACA+AGG | 0.696571 | 7_2:-70962878 | Msa1073430:intron |
AAGCAGTAGAACAATTTGAG+GGG | 0.710286 | 7_2:+70964079 | None:intergenic |
AGTTTGGAAAACCAACATCG+AGG | 0.720511 | 7_2:+70963610 | None:intergenic |
GTAGATGTCCTGAAACCGGG+AGG | 0.744447 | 7_2:+70963685 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCATTTTATCAATTTTTT+AGG | - | chr7_2:70962722-70962741 | Msa1073430:intron | 10.0% |
!!! | TTCATTTTATCAATTTTTTA+GGG | - | chr7_2:70962723-70962742 | Msa1073430:intron | 10.0% |
!!! | ATAACATTTTATTTCAATAT+CGG | - | chr7_2:70964331-70964350 | Msa1073430:intron | 10.0% |
!! | CATGATATTAAAAAAAAAAA+AGG | + | chr7_2:70965021-70965040 | None:intergenic | 10.0% |
!!! | TTTTTTTTATGTATATCAAC+TGG | + | chr7_2:70962835-70962854 | None:intergenic | 15.0% |
!! | GTTGATATACATAAAAAAAA+AGG | - | chr7_2:70962835-70962854 | Msa1073430:intron | 15.0% |
!! | TATACATAAAAAAAAAGGTT+TGG | - | chr7_2:70962840-70962859 | Msa1073430:intron | 15.0% |
!! | ATACATAAAAAAAAAGGTTT+GGG | - | chr7_2:70962841-70962860 | Msa1073430:intron | 15.0% |
!! | TCTCAACATATAAAAAAAAA+AGG | - | chr7_2:70962936-70962955 | Msa1073430:three_prime_UTR | 15.0% |
!!! | CATATAAAAAAAAAAGGTTT+TGG | - | chr7_2:70962942-70962961 | Msa1073430:three_prime_UTR | 15.0% |
!! | AATTATCACTAAAATCATAA+AGG | + | chr7_2:70964067-70964086 | None:intergenic | 15.0% |
!! | AATAATATCATGAAGATATT+AGG | - | chr7_2:70964823-70964842 | Msa1073430:intron | 15.0% |
!! | ATAATATCATGAAGATATTA+GGG | - | chr7_2:70964824-70964843 | Msa1073430:intron | 15.0% |
!!! | ACATAATAAAAAGTATGTAA+AGG | + | chr7_2:70966824-70966843 | None:intergenic | 15.0% |
!! | TGTTTATAAAAATATTTGAG+TGG | - | chr7_2:70966841-70966860 | Msa1073430:intron | 15.0% |
!! | TCACAAATATATATACTTAT+GGG | + | chr7_2:70966986-70967005 | None:intergenic | 15.0% |
!! | AACACAACATTATATTTGAA+TGG | + | chr7_2:70962678-70962697 | None:intergenic | 20.0% |
!!! | ACAAGTGTTATTTTTTTTAG+AGG | + | chr7_2:70962793-70962812 | None:intergenic | 20.0% |
!!! | ACTTGTTTATGATTTTTGTT+TGG | - | chr7_2:70962807-70962826 | Msa1073430:intron | 20.0% |
!!! | CTTGTTTATGATTTTTGTTT+GGG | - | chr7_2:70962808-70962827 | Msa1073430:intron | 20.0% |
!!! | TTGTTTATGATTTTTGTTTG+GGG | - | chr7_2:70962809-70962828 | Msa1073430:intron | 20.0% |
!!! | TTTTGGTCTGTAAAAAAAAA+AGG | - | chr7_2:70962959-70962978 | Msa1073430:three_prime_UTR | 20.0% |
!!! | TCTGTAAAAAAAAAAGGTTT+TGG | - | chr7_2:70962965-70962984 | Msa1073430:three_prime_UTR | 20.0% |
!!! | ATAAGCTTTTTCAATCTAAT+TGG | - | chr7_2:70963379-70963398 | Msa1073430:three_prime_UTR | 20.0% |
!!! | TTTTAAGTAGAAAACTAATC+AGG | + | chr7_2:70963463-70963482 | None:intergenic | 20.0% |
!!! | TTAGTTTTCTACTTAAAAAC+AGG | - | chr7_2:70963465-70963484 | Msa1073430:three_prime_UTR | 20.0% |
!! | TAACTTTATTGTTTGAGTAT+TGG | - | chr7_2:70963530-70963549 | Msa1073430:three_prime_UTR | 20.0% |
!!! | AATCTCAACATTTTAACAAA+AGG | - | chr7_2:70963925-70963944 | Msa1073430:three_prime_UTR | 20.0% |
!!! | AAAAGGTATACTATAATTCA+AGG | - | chr7_2:70963942-70963961 | Msa1073430:three_prime_UTR | 20.0% |
!!! | ACCATTTTCTAGTTATTATA+TGG | - | chr7_2:70964118-70964137 | Msa1073430:three_prime_UTR | 20.0% |
!! | TCCATATAATAACTAGAAAA+TGG | + | chr7_2:70964122-70964141 | None:intergenic | 20.0% |
!!! | TAAATACACATTTTCAAAGA+GGG | + | chr7_2:70964728-70964747 | None:intergenic | 20.0% |
!! | TTGAAAATGTGTATTTACAT+TGG | - | chr7_2:70964731-70964750 | Msa1073430:intron | 20.0% |
!! | ATGATATTATTCGCAATTAA+TGG | + | chr7_2:70964814-70964833 | None:intergenic | 20.0% |
!! | TAATATCATGAAGATATTAG+GGG | - | chr7_2:70964825-70964844 | Msa1073430:intron | 20.0% |
!! | ATAATTCACATATTTGGATA+GGG | + | chr7_2:70965576-70965595 | None:intergenic | 20.0% |
!! | TAAAAAAAGCAAACAAATGA+GGG | + | chr7_2:70966926-70966945 | None:intergenic | 20.0% |
!! | ATAAAAAAAGCAAACAAATG+AGG | + | chr7_2:70966927-70966946 | None:intergenic | 20.0% |
!! | CTCACAAATATATATACTTA+TGG | + | chr7_2:70966987-70967006 | None:intergenic | 20.0% |
!! | CATAAGTATATATATTTGTG+AGG | - | chr7_2:70966985-70967004 | Msa1073430:CDS | 20.0% |
!! | TTTGGATCATTCTAAAAAGT+TGG | - | chr7_2:70962564-70962583 | Msa1073430:three_prime_UTR | 25.0% |
!! | TTGGATCATTCTAAAAAGTT+GGG | - | chr7_2:70962565-70962584 | Msa1073430:three_prime_UTR | 25.0% |
!! | ATTTTGCACTAAGTTCTATA+GGG | + | chr7_2:70963340-70963359 | None:intergenic | 25.0% |
! | GATGTTAATATCTTAACAAC+TGG | - | chr7_2:70963401-70963420 | Msa1073430:three_prime_UTR | 25.0% |
!! | TTATCTAGAATTTAGGACTA+GGG | - | chr7_2:70963596-70963615 | Msa1073430:three_prime_UTR | 25.0% |
! | CATTCATGAAATGTTTCAAA+TGG | + | chr7_2:70963622-70963641 | None:intergenic | 25.0% |
!! | CATTTGAAACATTTCATGAA+TGG | - | chr7_2:70963620-70963639 | Msa1073430:three_prime_UTR | 25.0% |
!! | TAATCTGTCTTACTATTTTG+TGG | - | chr7_2:70963676-70963695 | Msa1073430:three_prime_UTR | 25.0% |
!!! | TCTTTTACGAACTTTGAAAA+TGG | + | chr7_2:70963739-70963758 | None:intergenic | 25.0% |
! | ATAATCCTATTGTGTTGAAA+GGG | + | chr7_2:70963897-70963916 | None:intergenic | 25.0% |
! | AATAATCCTATTGTGTTGAA+AGG | + | chr7_2:70963898-70963917 | None:intergenic | 25.0% |
! | AGAGGATAAATCTCTATAAA+TGG | - | chr7_2:70964178-70964197 | Msa1073430:three_prime_UTR | 25.0% |
! | ATAAATGGCACAGAAAATTA+AGG | - | chr7_2:70964193-70964212 | Msa1073430:three_prime_UTR | 25.0% |
!!! | TAGATAGATTTTGAAGCATT+TGG | - | chr7_2:70964664-70964683 | Msa1073430:intron | 25.0% |
!! | GTAAATACACATTTTCAAAG+AGG | + | chr7_2:70964729-70964748 | None:intergenic | 25.0% |
! | AATGTGTATTTACATTGGAT+TGG | - | chr7_2:70964736-70964755 | Msa1073430:intron | 25.0% |
! | ACAACAATGAAACGATAATA+AGG | + | chr7_2:70964767-70964786 | None:intergenic | 25.0% |
! | GTTTCATTGTTGTAATTCTT+GGG | - | chr7_2:70964774-70964793 | Msa1073430:intron | 25.0% |
! | AAGTTGAAAATGTGTATTTG+TGG | - | chr7_2:70965149-70965168 | Msa1073430:CDS | 25.0% |
! | AGTTGAAAATGTGTATTTGT+GGG | - | chr7_2:70965150-70965169 | Msa1073430:CDS | 25.0% |
! | TTCAACAATATCATTGAAAG+AGG | + | chr7_2:70965257-70965276 | None:intergenic | 25.0% |
! | TCTTTCAATGATATTGTTGA+AGG | - | chr7_2:70965256-70965275 | Msa1073430:intron | 25.0% |
! | AATTGAAACTACAATGAGTT+TGG | - | chr7_2:70965303-70965322 | Msa1073430:intron | 25.0% |
! | TAATTCACATATTTGGATAG+GGG | + | chr7_2:70965575-70965594 | None:intergenic | 25.0% |
! | CATAATTCACATATTTGGAT+AGG | + | chr7_2:70965577-70965596 | None:intergenic | 25.0% |
! | GTTAGCATAATTCACATATT+TGG | + | chr7_2:70965582-70965601 | None:intergenic | 25.0% |
! | TGCTTTCATATGAAAAATCT+TGG | - | chr7_2:70966176-70966195 | Msa1073430:intron | 25.0% |
!!! | TGCCGAGAAAATATTTTAAA+GGG | + | chr7_2:70966202-70966221 | None:intergenic | 25.0% |
!!! | ATGCCGAGAAAATATTTTAA+AGG | + | chr7_2:70966203-70966222 | None:intergenic | 25.0% |
! | ACTTTCTTATTCTGTTCATA+TGG | - | chr7_2:70966438-70966457 | Msa1073430:intron | 25.0% |
!!! | TAGAGGTATTTGCATAAATT+GGG | + | chr7_2:70966467-70966486 | None:intergenic | 25.0% |
!! | AGTATGTAAAGGAAATTTTC+TGG | + | chr7_2:70966813-70966832 | None:intergenic | 25.0% |
! | ATAACAATAACAAAGTCAGA+AGG | + | chr7_2:70966877-70966896 | None:intergenic | 25.0% |
!!! | TGTTATTGTTATTTTGCTGA+TGG | - | chr7_2:70966885-70966904 | Msa1073430:intron | 25.0% |
! | AAGTATATATATTTGTGAGG+TGG | - | chr7_2:70966988-70967007 | Msa1073430:CDS | 25.0% |
! | AGTATATATATTTGTGAGGT+GGG | - | chr7_2:70966989-70967008 | Msa1073430:CDS | 25.0% |
!! | TCAAAAAGAAACTTTTCTCT+TGG | - | chr7_2:70967114-70967133 | Msa1073430:CDS | 25.0% |
!! | CAAAAAGAAACTTTTCTCTT+GGG | - | chr7_2:70967115-70967134 | Msa1073430:CDS | 25.0% |
AAGTGGAAATAGCTGTTAAA+GGG | + | chr7_2:70962486-70962505 | None:intergenic | 30.0% | |
AAAGTGGAAATAGCTGTTAA+AGG | + | chr7_2:70962487-70962506 | None:intergenic | 30.0% | |
! | TGGATCATTCTAAAAAGTTG+GGG | - | chr7_2:70962566-70962585 | Msa1073430:three_prime_UTR | 30.0% |
GAAAGTGAAAATGTTGTAAG+TGG | + | chr7_2:70962598-70962617 | None:intergenic | 30.0% | |
!!! | AATTTTTTAGGGTGTGACAA+AGG | - | chr7_2:70962734-70962753 | Msa1073430:intron | 30.0% |
!!! | ATTTTTTAGGGTGTGACAAA+GGG | - | chr7_2:70962735-70962754 | Msa1073430:intron | 30.0% |
!! | TTTTCTTGTTTCAAACGATG+TGG | - | chr7_2:70963244-70963263 | Msa1073430:three_prime_UTR | 30.0% |
! | TTTCTTGTTTCAAACGATGT+GGG | - | chr7_2:70963245-70963264 | Msa1073430:three_prime_UTR | 30.0% |
!! | AAAAACTTGTTTCTGTTGTG+AGG | - | chr7_2:70963271-70963290 | Msa1073430:three_prime_UTR | 30.0% |
! | GATTTTGCACTAAGTTCTAT+AGG | + | chr7_2:70963341-70963360 | None:intergenic | 30.0% |
ATACACAATTCAGAATGTGA+TGG | - | chr7_2:70963489-70963508 | Msa1073430:three_prime_UTR | 30.0% | |
CTAGTCCTAAATTCTAGATA+AGG | + | chr7_2:70963597-70963616 | None:intergenic | 30.0% | |
! | CTTATCTAGAATTTAGGACT+AGG | - | chr7_2:70963595-70963614 | Msa1073430:three_prime_UTR | 30.0% |
ACAATCAAAGACATCATTTC+CGG | + | chr7_2:70963768-70963787 | None:intergenic | 30.0% | |
! | CATGTTTTCTTCTTCAACAT+GGG | + | chr7_2:70963796-70963815 | None:intergenic | 30.0% |
! | ACATGTTTTCTTCTTCAACA+TGG | + | chr7_2:70963797-70963816 | None:intergenic | 30.0% |
! | AACAGTTTTTGTAGAAGAAG+AGG | - | chr7_2:70963818-70963837 | Msa1073430:three_prime_UTR | 30.0% |
ATACATAACGTAGAATGTGA+TGG | - | chr7_2:70964032-70964051 | Msa1073430:intron | 30.0% | |
AGAGATTTATCCTCTTGAAT+TGG | + | chr7_2:70964173-70964192 | None:intergenic | 30.0% | |
! | ATGTTATCAATCAAGTGTTG+AGG | + | chr7_2:70964318-70964337 | None:intergenic | 30.0% |
TTTGATGCAGAATAGCTATT+TGG | - | chr7_2:70964425-70964444 | Msa1073430:intron | 30.0% | |
ATAGAGTTATGTTGCAATGA+CGG | + | chr7_2:70964464-70964483 | None:intergenic | 30.0% | |
ATAGAGTTATGTTGCAATGA+TGG | + | chr7_2:70964464-70964483 | None:intergenic | 30.0% | |
AACATAACTCTATGCTTGAA+TGG | - | chr7_2:70964505-70964524 | Msa1073430:intron | 30.0% | |
TCAAACGTTCATACTGAAAT+AGG | + | chr7_2:70964600-70964619 | None:intergenic | 30.0% | |
ATTTCAGTATGAACGTTTGA+TGG | - | chr7_2:70964600-70964619 | Msa1073430:intron | 30.0% | |
TGTGCTAAATATATTTGCCT+TGG | - | chr7_2:70964640-70964659 | Msa1073430:intron | 30.0% | |
CTTCAAAATCTATCTAACCA+AGG | + | chr7_2:70964660-70964679 | None:intergenic | 30.0% | |
CGTTTCATTGTTGTAATTCT+TGG | - | chr7_2:70964773-70964792 | Msa1073430:intron | 30.0% | |
AAAAAAAAAAAAGGGCAACC+CGG | + | chr7_2:70965012-70965031 | None:intergenic | 30.0% | |
CTCATTGTAGTTTCAATTGT+AGG | + | chr7_2:70965301-70965320 | None:intergenic | 30.0% | |
TATTCCAATTGTATCTCCTT+TGG | - | chr7_2:70965341-70965360 | Msa1073430:intron | 30.0% | |
! | CAACTTGATAGAAGCAATTT+TGG | + | chr7_2:70965468-70965487 | None:intergenic | 30.0% |
ATTGAGGCTCTTGTAAATAA+TGG | - | chr7_2:70965712-70965731 | Msa1073430:intron | 30.0% | |
ATCAAGTTCACCATGTAAAA+AGG | + | chr7_2:70965876-70965895 | None:intergenic | 30.0% | |
GTATATATGAAATTACCTCC+CGG | - | chr7_2:70965902-70965921 | Msa1073430:intron | 30.0% | |
! | GTTGTATGTGTTAGTTTATG+TGG | - | chr7_2:70966096-70966115 | Msa1073430:intron | 30.0% |
!!! | GGCCCTTTAAAATATTTTCT+CGG | - | chr7_2:70966197-70966216 | Msa1073430:intron | 30.0% |
! | AAAATATTTTCTCGGCATTG+AGG | - | chr7_2:70966205-70966224 | Msa1073430:intron | 30.0% |
TGATCTAAGGGAAAATTAAC+AGG | + | chr7_2:70966316-70966335 | None:intergenic | 30.0% | |
TGAACAGAATAAGAAAGTTC+TGG | + | chr7_2:70966436-70966455 | None:intergenic | 30.0% | |
TTCTTATTCTGTTCATATGG+TGG | - | chr7_2:70966441-70966460 | Msa1073430:intron | 30.0% | |
!! | CTAGAGGTATTTGCATAAAT+TGG | + | chr7_2:70966468-70966487 | None:intergenic | 30.0% |
GTATATATATTTGTGAGGTG+GGG | - | chr7_2:70966990-70967009 | Msa1073430:CDS | 30.0% | |
TTTACATTACACATTGCACA+TGG | - | chr7_2:70967051-70967070 | Msa1073430:CDS | 30.0% | |
GCTTTGTAAAACTGTGAAAG+TGG | + | chr7_2:70962503-70962522 | None:intergenic | 35.0% | |
! | CACAGTTTTACAAAGCACAA+AGG | - | chr7_2:70962507-70962526 | Msa1073430:three_prime_UTR | 35.0% |
CAAAGAACTTGAAGCTTCTT+TGG | - | chr7_2:70962546-70962565 | Msa1073430:three_prime_UTR | 35.0% | |
TACTGTGTCCTTGATTTCTA+AGG | + | chr7_2:70963145-70963164 | None:intergenic | 35.0% | |
TTGAACAGGATCTGTTCTAT+AGG | + | chr7_2:70963175-70963194 | None:intergenic | 35.0% | |
ATACAAATGCTTCTGACTCT+TGG | - | chr7_2:70963312-70963331 | Msa1073430:three_prime_UTR | 35.0% | |
! | AGGCACCTTATCTAGAATTT+AGG | - | chr7_2:70963589-70963608 | Msa1073430:three_prime_UTR | 35.0% |
AGTTCGTAAAAGATTGTTGC+CGG | - | chr7_2:70963746-70963765 | Msa1073430:three_prime_UTR | 35.0% | |
! | TTTTGTAGAAGAAGAGGAAC+TGG | - | chr7_2:70963824-70963843 | Msa1073430:three_prime_UTR | 35.0% |
TTAAGCCCTTTCAACACAAT+AGG | - | chr7_2:70963889-70963908 | Msa1073430:three_prime_UTR | 35.0% | |
GATGGAGCAATAACAAAACT+TGG | + | chr7_2:70964290-70964309 | None:intergenic | 35.0% | |
AACGTTCATACTGAAATAGG+TGG | + | chr7_2:70964597-70964616 | None:intergenic | 35.0% | |
! | GAAAAAGCAGCTGAATTTTC+TGG | + | chr7_2:70964704-70964723 | None:intergenic | 35.0% |
!!! | TTACCCTGTTTTTACACAAG+AGG | + | chr7_2:70964921-70964940 | None:intergenic | 35.0% |
TCTTGTGTAAAAACAGGGTA+AGG | - | chr7_2:70964920-70964939 | Msa1073430:intron | 35.0% | |
ATCATACATAATCCATCCCA+TGG | + | chr7_2:70965190-70965209 | None:intergenic | 35.0% | |
!! | GGGATGGATTATGTATGATT+TGG | - | chr7_2:70965191-70965210 | Msa1073430:intron | 35.0% |
ACAATATCATTGAAAGAGGC+AGG | + | chr7_2:70965253-70965272 | None:intergenic | 35.0% | |
AGATCCAAAGGAGATACAAT+TGG | + | chr7_2:70965348-70965367 | None:intergenic | 35.0% | |
!!! | TCATCACTGATTTTAACAGC+AGG | + | chr7_2:70965398-70965417 | None:intergenic | 35.0% |
TACCGATACTGTCGAAAATT+TGG | - | chr7_2:70965427-70965446 | Msa1073430:intron | 35.0% | |
ACCGATACTGTCGAAAATTT+GGG | - | chr7_2:70965428-70965447 | Msa1073430:intron | 35.0% | |
! | TCCCAAATTTTCGACAGTAT+CGG | + | chr7_2:70965432-70965451 | None:intergenic | 35.0% |
! | AATTGCTTCTATCAAGTTGC+AGG | - | chr7_2:70965469-70965488 | Msa1073430:intron | 35.0% |
GCATATCTTAGAGATGGTAT+TGG | + | chr7_2:70965504-70965523 | None:intergenic | 35.0% | |
AAGCAGTAGAACAATTTGAG+GGG | + | chr7_2:70965526-70965545 | None:intergenic | 35.0% | |
GAAGCAGTAGAACAATTTGA+GGG | + | chr7_2:70965527-70965546 | None:intergenic | 35.0% | |
ACATATTTGGATAGGGGATA+GGG | + | chr7_2:70965569-70965588 | None:intergenic | 35.0% | |
GCTAAAAAATGCATGTGTTG+TGG | + | chr7_2:70965611-70965630 | None:intergenic | 35.0% | |
CTCTTGTAAATAATGGCACT+TGG | - | chr7_2:70965719-70965738 | Msa1073430:intron | 35.0% | |
TTATCGTGAAACCTTTGCTT+CGG | - | chr7_2:70965766-70965785 | Msa1073430:intron | 35.0% | |
TTGGTGAAATTTCCAATGCT+TGG | + | chr7_2:70965837-70965856 | None:intergenic | 35.0% | |
GCATTGGAAATTTCACCAAA+TGG | - | chr7_2:70965838-70965857 | Msa1073430:intron | 35.0% | |
ATCTCTATACGTCTTGAAAC+AGG | - | chr7_2:70965967-70965986 | Msa1073430:intron | 35.0% | |
TTGACATGAGAGAATTCCAT+TGG | + | chr7_2:70966243-70966262 | None:intergenic | 35.0% | |
!! | AGATGATGGTTCTGATCTAA+GGG | + | chr7_2:70966328-70966347 | None:intergenic | 35.0% |
!! | AAGATGATGGTTCTGATCTA+AGG | + | chr7_2:70966329-70966348 | None:intergenic | 35.0% |
!! | ACTAGTCTTCTATAGTGATC+CGG | + | chr7_2:70966382-70966401 | None:intergenic | 35.0% |
GATCACTATAGAAGACTAGT+AGG | - | chr7_2:70966382-70966401 | Msa1073430:intron | 35.0% | |
TTTGAAGATCACAATCAGCT+TGG | + | chr7_2:70966561-70966580 | None:intergenic | 35.0% | |
AAATTTATGCCTGTGTGACT+CGG | - | chr7_2:70966578-70966597 | Msa1073430:intron | 35.0% | |
!!! | ATGTTGGTTTTCCAAGAGAT+AGG | + | chr7_2:70966667-70966686 | None:intergenic | 35.0% |
!!! | ATTGTTATTTTGCTGATGGC+AGG | - | chr7_2:70966889-70966908 | Msa1073430:intron | 35.0% |
!!! | TTGTTATTTTGCTGATGGCA+GGG | - | chr7_2:70966890-70966909 | Msa1073430:intron | 35.0% |
GAAATAGCTGTTAAAGGGAG+CGG | + | chr7_2:70962481-70962500 | None:intergenic | 40.0% | |
! | ACTCTGAAGGAAGGTAATCT+GGG | + | chr7_2:70962636-70962655 | None:intergenic | 40.0% |
TTGTTTACCTTGCACTCTGA+AGG | + | chr7_2:70962649-70962668 | None:intergenic | 40.0% | |
TCCTGTCTCCTTAGAAATCA+AGG | - | chr7_2:70963134-70963153 | Msa1073430:three_prime_UTR | 40.0% | |
! | TCCTTGATTTCTAAGGAGAC+AGG | + | chr7_2:70963138-70963157 | None:intergenic | 40.0% |
GAACAGATCCTGTTCAAGTA+AGG | - | chr7_2:70963178-70963197 | Msa1073430:three_prime_UTR | 40.0% | |
ATGGCACAGAAAATTAAGGC+AGG | - | chr7_2:70964197-70964216 | Msa1073430:three_prime_UTR | 40.0% | |
GAAAATTAAGGCAGGCAATC+AGG | - | chr7_2:70964205-70964224 | Msa1073430:three_prime_UTR | 40.0% | |
AAGTGTGAATCTTGACACGA+AGG | - | chr7_2:70964235-70964254 | Msa1073430:three_prime_UTR | 40.0% | |
!! | TCAATCAAGTGTTGAGGTGA+GGG | + | chr7_2:70964312-70964331 | None:intergenic | 40.0% |
!! | ATCAATCAAGTGTTGAGGTG+AGG | + | chr7_2:70964313-70964332 | None:intergenic | 40.0% |
! | TGCTCATGTTTCGAGTAACT+TGG | - | chr7_2:70964374-70964393 | Msa1073430:intron | 40.0% |
GATGCAGAATAGCTATTTGG+TGG | - | chr7_2:70964428-70964447 | Msa1073430:intron | 40.0% | |
!! | GTTGCAATGATGGACATAGA+AGG | + | chr7_2:70964488-70964507 | None:intergenic | 40.0% |
CACATTATACTGCAAGGCAT+TGG | + | chr7_2:70964562-70964581 | None:intergenic | 40.0% | |
CACTCTCACATTATACTGCA+AGG | + | chr7_2:70964568-70964587 | None:intergenic | 40.0% | |
CTTGCAGTATAATGTGAGAG+TGG | - | chr7_2:70964566-70964585 | Msa1073430:intron | 40.0% | |
! | GTATGAACGTTTGATGGTTC+AGG | - | chr7_2:70964606-70964625 | Msa1073430:intron | 40.0% |
!!! | GCAGCTGAATTTTCTGGTTA+AGG | + | chr7_2:70964698-70964717 | None:intergenic | 40.0% |
GAAGATATTAGGGGTAACCT+TGG | - | chr7_2:70964834-70964853 | Msa1073430:intron | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | - | chr7_2:70964914-70964933 | Msa1073430:intron | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | - | chr7_2:70964915-70964934 | Msa1073430:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr7_2:70964946-70964965 | Msa1073430:intron | 40.0% | |
GATACAATTGGAATAGCAGG+TGG | + | chr7_2:70965336-70965355 | None:intergenic | 40.0% | |
GGAGATACAATTGGAATAGC+AGG | + | chr7_2:70965339-70965358 | None:intergenic | 40.0% | |
CTCATGTGAAGAAGATCCAA+AGG | + | chr7_2:70965360-70965379 | None:intergenic | 40.0% | |
!!! | TCACTGATTTTAACAGCAGG+TGG | + | chr7_2:70965395-70965414 | None:intergenic | 40.0% |
!!! | TTTTCGACAGTATCGGTAAC+AGG | + | chr7_2:70965425-70965444 | None:intergenic | 40.0% |
CGAAGCAGTAGAACAATTTG+AGG | + | chr7_2:70965528-70965547 | None:intergenic | 40.0% | |
CACATATTTGGATAGGGGAT+AGG | + | chr7_2:70965570-70965589 | None:intergenic | 40.0% | |
TTCTGTAGCTGCAGAAATAG+CGG | + | chr7_2:70965633-70965652 | None:intergenic | 40.0% | |
ACAGTAAGAATGTTTCTCGC+TGG | - | chr7_2:70965742-70965761 | Msa1073430:intron | 40.0% | |
! | CATTTTCACAACCGAAGCAA+AGG | + | chr7_2:70965780-70965799 | None:intergenic | 40.0% |
CTTTGCTTCGGTTGTGAAAA+TGG | - | chr7_2:70965778-70965797 | Msa1073430:intron | 40.0% | |
! | GTTCACAGTGCCTTTTTACA+TGG | - | chr7_2:70965863-70965882 | Msa1073430:intron | 40.0% |
AGTTTGGAAAACCAACATCG+AGG | + | chr7_2:70965995-70966014 | None:intergenic | 40.0% | |
GTGGATGACCTTATCATTTC+TGG | - | chr7_2:70966115-70966134 | Msa1073430:intron | 40.0% | |
CGTTGTTGCCAGAAATGATA+AGG | + | chr7_2:70966126-70966145 | None:intergenic | 40.0% | |
! | ATGAAAGCATGTGCTCAAGT+AGG | + | chr7_2:70966165-70966184 | None:intergenic | 40.0% |
!! | ATATTTTCTCGGCATTGAGG+TGG | - | chr7_2:70966208-70966227 | Msa1073430:intron | 40.0% |
ACTTGATCTCATATCGAAGC+TGG | - | chr7_2:70966274-70966293 | Msa1073430:intron | 40.0% | |
CTTGATCTCATATCGAAGCT+GGG | - | chr7_2:70966275-70966294 | Msa1073430:intron | 40.0% | |
TCAGAACCATCATCTTCCTT+TGG | - | chr7_2:70966333-70966352 | Msa1073430:intron | 40.0% | |
ATTGGAAACTGGAATTCCAG+TGG | + | chr7_2:70966359-70966378 | None:intergenic | 40.0% | |
TGGAATTCCAGTTTCCAATC+CGG | - | chr7_2:70966360-70966379 | Msa1073430:intron | 40.0% | |
TCTTCTATAGTGATCCGGAT+TGG | + | chr7_2:70966377-70966396 | None:intergenic | 40.0% | |
TAGAAGACTAGTAGGTCGTT+TGG | - | chr7_2:70966390-70966409 | Msa1073430:intron | 40.0% | |
!!! | ACTGGATGGGTTGTTTTTCT+CGG | - | chr7_2:70966634-70966653 | Msa1073430:intron | 40.0% |
!! | CAAGACAACTTGTTGCATGT+TGG | + | chr7_2:70966683-70966702 | None:intergenic | 40.0% |
TGCAGCATGTATGCTTCTAT+GGG | + | chr7_2:70966952-70966971 | None:intergenic | 40.0% | |
! | CACTCTGAAGGAAGGTAATC+TGG | + | chr7_2:70962637-70962656 | None:intergenic | 45.0% |
TTACCTTCCTTCAGAGTGCA+AGG | - | chr7_2:70962639-70962658 | Msa1073430:three_prime_UTR | 45.0% | |
! | TTACCTTGCACTCTGAAGGA+AGG | + | chr7_2:70962645-70962664 | None:intergenic | 45.0% |
TTCTCAGACACACGTTGTCT+GGG | + | chr7_2:70963015-70963034 | None:intergenic | 45.0% | |
TGCGATCAGAGCGTGATTAA+CGG | + | chr7_2:70963085-70963104 | None:intergenic | 45.0% | |
TTAATCACGCTCTGATCGCA+CGG | - | chr7_2:70963085-70963104 | Msa1073430:three_prime_UTR | 45.0% | |
AGGAGACAGGAACATATGTC+TGG | + | chr7_2:70963125-70963144 | None:intergenic | 45.0% | |
ATAAGACACGCGTGAAGCAT+TGG | + | chr7_2:70963210-70963229 | None:intergenic | 45.0% | |
TGCAAGCATGACAATCTGAG+AGG | - | chr7_2:70963564-70963583 | Msa1073430:three_prime_UTR | 45.0% | |
GACAGTCAGTCCAATTCAAG+AGG | - | chr7_2:70964160-70964179 | Msa1073430:three_prime_UTR | 45.0% | |
CTTGACACGAAGGTTAGACA+AGG | - | chr7_2:70964245-70964264 | Msa1073430:three_prime_UTR | 45.0% | |
!! | GTTGCAATGACGGACATAGA+AGG | + | chr7_2:70964454-70964473 | None:intergenic | 45.0% |
!! | AAGGCATTGGAGACATGAGA+GGG | + | chr7_2:70964549-70964568 | None:intergenic | 45.0% |
GTTGTTGTCATGTGACCGTA+AGG | - | chr7_2:70964870-70964889 | Msa1073430:intron | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7_2:70964910-70964929 | None:intergenic | 45.0% |
GCTGCGTACAATACACCAAA+TGG | - | chr7_2:70964942-70964961 | Msa1073430:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | chr7_2:70964945-70964964 | Msa1073430:intron | 45.0% | |
AGACATCCAATGTGTACAGC+AGG | + | chr7_2:70965081-70965100 | None:intergenic | 45.0% | |
! | GTATTTGTGGGCTATGCCTA+TGG | - | chr7_2:70965162-70965181 | Msa1073430:CDS | 45.0% |
AACAGCAGGTGGCATATCAT+GGG | + | chr7_2:70965384-70965403 | None:intergenic | 45.0% | |
TAACAGCAGGTGGCATATCA+TGG | + | chr7_2:70965385-70965404 | None:intergenic | 45.0% | |
! | ACTGTCGAAAATTTGGGACG+TGG | - | chr7_2:70965434-70965453 | Msa1073430:intron | 45.0% |
! | TGAGGGGCATATCTTAGAGA+TGG | + | chr7_2:70965510-70965529 | None:intergenic | 45.0% |
AACCTTAGCTGAAGCTGTCA+AGG | - | chr7_2:70965657-70965676 | Msa1073430:intron | 45.0% | |
ATCCTTGACAGCTTCAGCTA+AGG | + | chr7_2:70965662-70965681 | None:intergenic | 45.0% | |
AAGCTGTCAAGGATATCCGA+TGG | - | chr7_2:70965668-70965687 | Msa1073430:intron | 45.0% | |
GCTGCATGACAATTCACCAT+CGG | + | chr7_2:70965687-70965706 | None:intergenic | 45.0% | |
ATGGTGAATTGTCATGCAGC+TGG | - | chr7_2:70965687-70965706 | Msa1073430:intron | 45.0% | |
TGTCATGCAGCTGGAAATTG+AGG | - | chr7_2:70965696-70965715 | Msa1073430:intron | 45.0% | |
! | AGGCACTGTGAACATCCATT+TGG | + | chr7_2:70965856-70965875 | None:intergenic | 45.0% |
TGAAATTACCTCCCGGTTTC+AGG | - | chr7_2:70965909-70965928 | Msa1073430:intron | 45.0% | |
TGGTGTAGATGTCCTGAAAC+CGG | + | chr7_2:70965924-70965943 | None:intergenic | 45.0% | |
CAGGACATCTACACCAAATC+AGG | - | chr7_2:70965928-70965947 | Msa1073430:intron | 45.0% | |
CGTATAGAGATTTGCGCAAG+CGG | + | chr7_2:70965958-70965977 | None:intergenic | 45.0% | |
!!! | TAGCAGAGCGCTTTTGAGTT+TGG | + | chr7_2:70966011-70966030 | None:intergenic | 45.0% |
!! | AACTCAAAAGCGCTCTGCTA+CGG | - | chr7_2:70966011-70966030 | Msa1073430:intron | 45.0% |
TCATATCGAAGCTGGGTTGT+TGG | - | chr7_2:70966282-70966301 | Msa1073430:intron | 45.0% | |
CATATCGAAGCTGGGTTGTT+GGG | - | chr7_2:70966283-70966302 | Msa1073430:intron | 45.0% | |
! | TAGTGATCCGGATTGGAAAC+TGG | + | chr7_2:70966370-70966389 | None:intergenic | 45.0% |
TTGGTCTGCTTAACTGTCAC+TGG | - | chr7_2:70966409-70966428 | Msa1073430:intron | 45.0% | |
! | TCGTGTTGTTCGCTATCTCA+AGG | - | chr7_2:70966510-70966529 | Msa1073430:intron | 45.0% |
! | CGTGTTGTTCGCTATCTCAA+GGG | - | chr7_2:70966511-70966530 | Msa1073430:intron | 45.0% |
TTGGAGAAGAATACCTTGGC+CGG | + | chr7_2:70966542-70966561 | None:intergenic | 45.0% | |
CAGCTTGGAGAAGAATACCT+TGG | + | chr7_2:70966546-70966565 | None:intergenic | 45.0% | |
! | AGTTAGAGTGCCTAGTCAAG+TGG | + | chr7_2:70966617-70966636 | None:intergenic | 45.0% |
ACTTGACTAGGCACTCTAAC+TGG | - | chr7_2:70966616-70966635 | Msa1073430:intron | 45.0% | |
ACTAGGCACTCTAACTGGAT+GGG | - | chr7_2:70966621-70966640 | Msa1073430:intron | 45.0% | |
!!! | CTGGATGGGTTGTTTTTCTC+GGG | - | chr7_2:70966635-70966654 | Msa1073430:intron | 45.0% |
CTGCAGCATGTATGCTTCTA+TGG | + | chr7_2:70966953-70966972 | None:intergenic | 45.0% | |
! | AGAAGCATACATGCTGCAGA+TGG | - | chr7_2:70966954-70966973 | Msa1073430:intron | 45.0% |
ATTTGTGAGGTGGGGATCAT+TGG | - | chr7_2:70966998-70967017 | Msa1073430:CDS | 45.0% | |
ACATGGAACTGCTGAACCTT+GGG | - | chr7_2:70967068-70967087 | Msa1073430:CDS | 45.0% | |
!! | ATGATATTAAAAAAAAAAAA+GGG | + | chr7_2:70965020-70965039 | None:intergenic | 5.0% |
AGCTGTTAAAGGGAGCGGTT+CGG | + | chr7_2:70962476-70962495 | None:intergenic | 50.0% | |
TTCTCAGACACACGCTGTCT+GGG | + | chr7_2:70962891-70962910 | None:intergenic | 50.0% | |
TCTCAGACACACGTTGTCTG+GGG | + | chr7_2:70963014-70963033 | None:intergenic | 50.0% | |
GTTCTCAGACACACGTTGTC+TGG | + | chr7_2:70963016-70963035 | None:intergenic | 50.0% | |
GGTCACGACCTTACTTGAAC+AGG | + | chr7_2:70963189-70963208 | None:intergenic | 50.0% | |
GCATGACAATCTGAGAGGCA+AGG | - | chr7_2:70963569-70963588 | Msa1073430:three_prime_UTR | 50.0% | |
TAAGGCAGGCAATCAGGCTA+AGG | - | chr7_2:70964211-70964230 | Msa1073430:three_prime_UTR | 50.0% | |
!! | TCAAGTGTTGAGGTGAGGGA+TGG | + | chr7_2:70964308-70964327 | None:intergenic | 50.0% |
!! | CAAGGCATTGGAGACATGAG+AGG | + | chr7_2:70964550-70964569 | None:intergenic | 50.0% |
CAACTTTACCAGTTGCGCCA+AGG | + | chr7_2:70964854-70964873 | None:intergenic | 50.0% | |
GTCATGTGACCGTAAGGTCA+CGG | - | chr7_2:70964876-70964895 | Msa1073430:intron | 50.0% | |
TCATGTGACCGTAAGGTCAC+GGG | - | chr7_2:70964877-70964896 | Msa1073430:intron | 50.0% | |
GACTTGAACCCGTGACCTTA+CGG | + | chr7_2:70964888-70964907 | None:intergenic | 50.0% | |
ATGCCACCTGCTGTACACAT+TGG | - | chr7_2:70965072-70965091 | Msa1073430:CDS | 50.0% | |
CATCCAATGTGTACAGCAGG+TGG | + | chr7_2:70965078-70965097 | None:intergenic | 50.0% | |
!! | AATCCATCCCATGGTGCCAT+AGG | + | chr7_2:70965181-70965200 | None:intergenic | 50.0% |
GACAGCTTCAGCTAAGGTTG+AGG | + | chr7_2:70965656-70965675 | None:intergenic | 50.0% | |
GGTGTAGATGTCCTGAAACC+GGG | + | chr7_2:70965923-70965942 | None:intergenic | 50.0% | |
TGAAACAGGCACCTCGATGT+TGG | - | chr7_2:70965981-70966000 | Msa1073430:intron | 50.0% | |
!! | AAAAGCGCTCTGCTACGGTA+TGG | - | chr7_2:70966016-70966035 | Msa1073430:intron | 50.0% |
CAGTGGCCAAAGGAAGATGA+TGG | + | chr7_2:70966342-70966361 | None:intergenic | 50.0% | |
CATCATCTTCCTTTGGCCAC+TGG | - | chr7_2:70966340-70966359 | Msa1073430:intron | 50.0% | |
ACTGGAATTCCAGTGGCCAA+AGG | + | chr7_2:70966352-70966371 | None:intergenic | 50.0% | |
GCGTTCTAGTGCTCTTCTAG+AGG | + | chr7_2:70966484-70966503 | None:intergenic | 50.0% | |
TGGAGAAGAATACCTTGGCC+GGG | + | chr7_2:70966541-70966560 | None:intergenic | 50.0% | |
! | TATGCCTGTGTGACTCGGAT+TGG | - | chr7_2:70966583-70966602 | Msa1073430:intron | 50.0% |
TTGTCCAATCCGAGTCACAC+AGG | + | chr7_2:70966590-70966609 | None:intergenic | 50.0% | |
! | GGACAAGTTGCCACTTGACT+AGG | - | chr7_2:70966604-70966623 | Msa1073430:intron | 50.0% |
GACTAGGCACTCTAACTGGA+TGG | - | chr7_2:70966620-70966639 | Msa1073430:intron | 50.0% | |
TCGGGAACTCACCTATCTCT+TGG | - | chr7_2:70966653-70966672 | Msa1073430:intron | 50.0% | |
TGAGGCAGAATCTTGGCATG+AGG | - | chr7_2:70966714-70966733 | Msa1073430:intron | 50.0% | |
TCTTGGCATGAGGTTCGACA+AGG | - | chr7_2:70966724-70966743 | Msa1073430:intron | 50.0% | |
CACATGGAACTGCTGAACCT+TGG | - | chr7_2:70967067-70967086 | Msa1073430:CDS | 50.0% | |
CATGGAACTGCTGAACCTTG+GGG | - | chr7_2:70967069-70967088 | Msa1073430:CDS | 50.0% | |
AACTGCTGAACCTTGGGGTT+GGG | - | chr7_2:70967074-70967093 | Msa1073430:CDS | 50.0% | |
TCTCAGACACACGCTGTCTG+GGG | + | chr7_2:70962890-70962909 | None:intergenic | 55.0% | |
GTTCTCAGACACACGCTGTC+TGG | + | chr7_2:70962892-70962911 | None:intergenic | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | - | chr7_2:70964889-70964908 | Msa1073430:intron | 55.0% | |
CTGAAGCTCCCGCATATGCA+GGG | + | chr7_2:70964985-70965004 | None:intergenic | 55.0% | |
ACTGAAGCTCCCGCATATGC+AGG | + | chr7_2:70964986-70965005 | None:intergenic | 55.0% | |
GGCTATGCCTATGGCACCAT+GGG | - | chr7_2:70965171-70965190 | Msa1073430:intron | 55.0% | |
ATGCCTATGGCACCATGGGA+TGG | - | chr7_2:70965175-70965194 | Msa1073430:intron | 55.0% | |
TACTGCTTCGTCACGTCCTG+CGG | - | chr7_2:70965538-70965557 | Msa1073430:intron | 55.0% | |
CTGTTGCTGCTGCCAAGCAT+TGG | - | chr7_2:70965822-70965841 | Msa1073430:intron | 55.0% | |
GTAGATGTCCTGAAACCGGG+AGG | + | chr7_2:70965920-70965939 | None:intergenic | 55.0% | |
! | TTCTCGGCATTGAGGTGGCT+CGG | - | chr7_2:70966213-70966232 | Msa1073430:intron | 55.0% |
CGCTATCTCAAGGGAGATCC+CGG | - | chr7_2:70966520-70966539 | Msa1073430:intron | 55.0% | |
TGTCTTGCGTTCCTCTGCTG+AGG | - | chr7_2:70966696-70966715 | Msa1073430:intron | 55.0% | |
CCAAGATTCTGCCTCAGCAG+AGG | + | chr7_2:70966710-70966729 | None:intergenic | 55.0% | |
CCTCTGCTGAGGCAGAATCT+TGG | - | chr7_2:70966707-70966726 | Msa1073430:intron | 55.0% | |
GAACTGCTGAACCTTGGGGT+TGG | - | chr7_2:70967073-70967092 | Msa1073430:CDS | 55.0% | |
ACTGCTGAACCTTGGGGTTG+GGG | - | chr7_2:70967075-70967094 | Msa1073430:CDS | 55.0% | |
CAGACACACGTTGTCTGGGG+TGG | + | chr7_2:70963011-70963030 | None:intergenic | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | - | chr7_2:70964843-70964862 | Msa1073430:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_2:70964958-70964977 | Msa1073430:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | + | chr7_2:70964973-70964992 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | + | chr7_2:70964974-70964993 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | - | chr7_2:70964973-70964992 | Msa1073430:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | - | chr7_2:70964974-70964993 | Msa1073430:intron | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | - | chr7_2:70964990-70965009 | Msa1073430:intron | 60.0% | |
GGGCTATGCCTATGGCACCA+TGG | - | chr7_2:70965170-70965189 | Msa1073430:CDS | 60.0% | |
ACTGCTTCGTCACGTCCTGC+GGG | - | chr7_2:70965539-70965558 | Msa1073430:intron | 60.0% | |
CGCAAGCGGCATGCCTGATT+TGG | + | chr7_2:70965944-70965963 | None:intergenic | 60.0% | |
CTGCTGAACCTTGGGGTTGG+GGG | - | chr7_2:70967076-70967095 | Msa1073430:CDS | 60.0% | |
CAGACACACGCTGTCTGGGG+TGG | + | chr7_2:70962887-70962906 | None:intergenic | 65.0% | |
! | CGTTGTCTGGGGTGGTCGCA+CGG | + | chr7_2:70963003-70963022 | None:intergenic | 65.0% |
CGGGAAGGGGTCCCACCATT+TGG | + | chr7_2:70964960-70964979 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | + | chr7_2:70964975-70964994 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | + | chr7_2:70964979-70964998 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | + | chr7_2:70964980-70964999 | None:intergenic | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | - | chr7_2:70964991-70965010 | Msa1073430:intron | 65.0% | |
AGGGGATAGGGTGTACCCGC+AGG | + | chr7_2:70965557-70965576 | None:intergenic | 65.0% | |
! | GAGGTGGCTCGGAGTGCCAA+TGG | - | chr7_2:70966224-70966243 | Msa1073430:intron | 65.0% |
CTCAAGGGAGATCCCGGCCA+AGG | - | chr7_2:70966526-70966545 | Msa1073430:intron | 65.0% | |
AACAAGCGCCCCCAACCCCA+AGG | + | chr7_2:70967087-70967106 | None:intergenic | 65.0% | |
! | CGCTGTCTGGGGTGGTCGCA+CGG | + | chr7_2:70962879-70962898 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 70962472 | 70967152 | 70962472 | ID=Msa1073430;Name=Msa1073430 |
chr7_2 | mRNA | 70962472 | 70967152 | 70962472 | ID=Msa1073430-mRNA-1;Parent=Msa1073430;Name=Msa1073430-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.6|0.66|1|0.2|0.16|6|1628|138 |
chr7_2 | exon | 70962472 | 70962713 | 70962472 | ID=Msa1073430-mRNA-1:exon:16054;Parent=Msa1073430-mRNA-1 |
chr7_2 | exon | 70962879 | 70963979 | 70962879 | ID=Msa1073430-mRNA-1:exon:16053;Parent=Msa1073430-mRNA-1 |
chr7_2 | exon | 70964064 | 70964332 | 70964064 | ID=Msa1073430-mRNA-1:exon:16052;Parent=Msa1073430-mRNA-1 |
chr7_2 | exon | 70964997 | 70965189 | 70964997 | ID=Msa1073430-mRNA-1:exon:16051;Parent=Msa1073430-mRNA-1 |
chr7_2 | exon | 70965368 | 70965418 | 70965368 | ID=Msa1073430-mRNA-1:exon:16050;Parent=Msa1073430-mRNA-1 |
chr7_2 | exon | 70966964 | 70967152 | 70966964 | ID=Msa1073430-mRNA-1:exon:16049;Parent=Msa1073430-mRNA-1 |
chr7_2 | CDS | 70966964 | 70967152 | 70966964 | ID=Msa1073430-mRNA-1:cds;Parent=Msa1073430-mRNA-1 |
chr7_2 | CDS | 70965368 | 70965418 | 70965368 | ID=Msa1073430-mRNA-1:cds;Parent=Msa1073430-mRNA-1 |
chr7_2 | CDS | 70965013 | 70965189 | 70965013 | ID=Msa1073430-mRNA-1:cds;Parent=Msa1073430-mRNA-1 |
chr7_2 | three_prime_UTR | 70964997 | 70965012 | 70964997 | ID=Msa1073430-mRNA-1:three_prime_utr;Parent=Msa1073430-mRNA-1 |
chr7_2 | three_prime_UTR | 70964064 | 70964332 | 70964064 | ID=Msa1073430-mRNA-1:three_prime_utr;Parent=Msa1073430-mRNA-1 |
chr7_2 | three_prime_UTR | 70962879 | 70963979 | 70962879 | ID=Msa1073430-mRNA-1:three_prime_utr;Parent=Msa1073430-mRNA-1 |
chr7_2 | three_prime_UTR | 70962472 | 70962713 | 70962472 | ID=Msa1073430-mRNA-1:three_prime_utr;Parent=Msa1073430-mRNA-1 |
Gene Sequence |
Protein sequence |