Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074520 | XP_024627008.1 | 90.076 | 393 | 9 | 1 | 1 | 363 | 1 | 393 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074520 | sp|Q9M682|GMK2_ARATH | 63.918 | 388 | 110 | 5 | 1 | 358 | 1 | 388 | 3.07e-167 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074520 | A0A396H552 | 90.076 | 393 | 9 | 1 | 1 | 363 | 1 | 393 | 0.0 | 711 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1034720 | Msa1074520 | 0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa1074520 | Msa1115050 | 0.917064 | 8.368710e-86 | -8.615850e-47 |
| Msa1074520 | Msa1162080 | 0.874855 | 4.871552e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074520 | MtrunA17_Chr7g0257781 | 90.076 | 393 | 9 | 1 | 1 | 363 | 1 | 393 | 0.0 | 711 |
| Msa1074520 | MtrunA17_Chr2g0287261 | 36.747 | 166 | 100 | 3 | 136 | 300 | 91 | 252 | 1.98e-24 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074520 | AT3G57550.1 | 63.918 | 388 | 110 | 5 | 1 | 358 | 1 | 388 | 3.12e-168 | 475 |
| Msa1074520 | AT3G57550.3 | 63.918 | 388 | 110 | 5 | 1 | 358 | 1 | 388 | 3.12e-168 | 475 |
| Msa1074520 | AT3G57550.2 | 63.753 | 389 | 110 | 5 | 1 | 358 | 1 | 389 | 3.12e-168 | 475 |
| Msa1074520 | AT2G41880.1 | 64.136 | 382 | 104 | 5 | 1 | 351 | 1 | 380 | 3.76e-164 | 464 |
| Msa1074520 | AT2G41880.7 | 64.136 | 382 | 104 | 5 | 1 | 351 | 1 | 380 | 3.76e-164 | 464 |
| Msa1074520 | AT2G41880.4 | 70.588 | 323 | 91 | 3 | 1 | 319 | 1 | 323 | 1.04e-158 | 449 |
| Msa1074520 | AT2G41880.6 | 70.588 | 323 | 91 | 3 | 1 | 319 | 1 | 323 | 1.63e-158 | 449 |
| Msa1074520 | AT2G41880.8 | 70.588 | 323 | 91 | 3 | 1 | 319 | 1 | 323 | 1.63e-158 | 449 |
| Msa1074520 | AT2G41880.5 | 59.611 | 411 | 104 | 6 | 1 | 351 | 1 | 409 | 4.15e-157 | 447 |
| Msa1074520 | AT2G41880.9 | 70.476 | 315 | 89 | 3 | 1 | 311 | 1 | 315 | 2.24e-154 | 437 |
| Msa1074520 | AT2G41880.2 | 70.476 | 315 | 89 | 3 | 1 | 311 | 1 | 315 | 3.02e-154 | 437 |
| Msa1074520 | AT2G41880.3 | 70.476 | 315 | 89 | 3 | 1 | 311 | 1 | 315 | 3.02e-154 | 437 |
| Msa1074520 | AT3G06200.1 | 32.418 | 182 | 116 | 4 | 136 | 314 | 91 | 268 | 1.94e-20 | 90.5 |
Find 106 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCGTTCTTTGATTATTTA+TGG | 0.084174 | 7_2:-72401756 | Msa1074520:three_prime_UTR |
| GTTGCAACTGCACCCAAATT+AGG | 0.227947 | 7_2:-72402457 | Msa1074520:CDS |
| CTTCAGGATGGACCTCTTAA+TGG | 0.276233 | 7_2:-72404235 | Msa1074520:CDS |
| ATTGTTATTAGTGGTCCTTC+TGG | 0.288971 | 7_2:-72403557 | Msa1074520:CDS |
| CGTTCTTGCTTCGTTTCTTA+AGG | 0.293076 | 7_2:-72405008 | Msa1074520:intron |
| TTCTCAAGCTCTTCCATTGA+TGG | 0.297823 | 7_2:+72402817 | None:intergenic |
| TCCTGCCTGCCTGCCCTTGA+AGG | 0.298416 | 7_2:-72405220 | Msa1074520:five_prime_UTR |
| GAGCATTACGCAGTCGCTTT+AGG | 0.302663 | 7_2:+72402675 | None:intergenic |
| CCATATCTGGTCATCTGATT+TGG | 0.313449 | 7_2:+72403794 | None:intergenic |
| CCATCTTTCTCCATATTTCT+CGG | 0.318499 | 7_2:+72403449 | None:intergenic |
| TCACACTCTTCTCAGTAAAA+TGG | 0.321682 | 7_2:+72403417 | None:intergenic |
| CCAAATCAGATGACCAGATA+TGG | 0.340254 | 7_2:-72403794 | Msa1074520:CDS |
| AAGGAATTCCCTTCGATGTT+TGG | 0.340728 | 7_2:-72403500 | Msa1074520:CDS |
| TCAAGTCCTCTTGTCCTTCC+AGG | 0.345102 | 7_2:+72401935 | None:intergenic |
| AACCCGTGCTCCGAGAAATA+TGG | 0.350022 | 7_2:-72403459 | Msa1074520:CDS |
| CAGAAATTACTGGGACTTGA+TGG | 0.358399 | 7_2:-72402484 | Msa1074520:CDS |
| GTTCCTTGTTGATGACCTTC+AGG | 0.367183 | 7_2:-72404251 | Msa1074520:CDS |
| TTCATTGGTGCAGAAATTAC+TGG | 0.369583 | 7_2:-72402494 | Msa1074520:intron |
| TCTGTCCATGGTAATTTGTA+TGG | 0.376553 | 7_2:-72403353 | Msa1074520:CDS |
| TATAGACACATATTTCTCTA+TGG | 0.400621 | 7_2:-72404454 | Msa1074520:intron |
| CTCGAATTTGCTTCTGTCCA+TGG | 0.403156 | 7_2:-72403365 | Msa1074520:CDS |
| GAGAAACCTATTGTTATTAG+TGG | 0.405407 | 7_2:-72403566 | Msa1074520:CDS |
| ATTCTTGATATTGATGTTCA+AGG | 0.419974 | 7_2:-72402895 | Msa1074520:CDS |
| TTCAAGGAGCAAGATCTGTT+AGG | 0.421033 | 7_2:-72402879 | Msa1074520:CDS |
| GTCTGTCATAACACTCTTCA+AGG | 0.422735 | 7_2:+72402591 | None:intergenic |
| TGAGGTTGTTGCTTGGAGTA+AGG | 0.423659 | 7_2:-72403606 | Msa1074520:CDS |
| CCCACAAAGAAAACAGAAAC+AGG | 0.424265 | 7_2:-72405243 | Msa1074520:five_prime_UTR |
| TGGACAGACAAAGATGAATA+TGG | 0.427437 | 7_2:+72402840 | None:intergenic |
| TGGAACCTTTCTTAAGAACT+AGG | 0.427990 | 7_2:+72403814 | None:intergenic |
| CTTTGTCTGTCCACCATCAA+TGG | 0.430337 | 7_2:-72402830 | Msa1074520:CDS |
| GAAGGACCACTAATAACAAT+AGG | 0.431055 | 7_2:+72403560 | None:intergenic |
| ATTAGTGGTCCTTCTGGAGT+TGG | 0.435618 | 7_2:-72403551 | Msa1074520:CDS |
| AGGAAGAAATTCATATTTGT+AGG | 0.438406 | 7_2:+72405157 | None:intergenic |
| AACTTTAGCCACAACTAACT+TGG | 0.441501 | 7_2:-72401866 | Msa1074520:three_prime_UTR |
| ACCTTCAAGGGCAGGCAGGC+AGG | 0.443489 | 7_2:+72405219 | None:intergenic |
| CTCCATATTTCTCGGAGCAC+GGG | 0.445632 | 7_2:+72403457 | None:intergenic |
| CGGATCCTAGTTCTTAAGAA+AGG | 0.451808 | 7_2:-72403819 | Msa1074520:CDS |
| TCTCCATATTTCTCGGAGCA+CGG | 0.454075 | 7_2:+72403456 | None:intergenic |
| AATTATCTCATTGCCCATGC+AGG | 0.455168 | 7_2:+72401686 | None:intergenic |
| GGTTTGGTGCCTAGCACAGT+TGG | 0.455219 | 7_2:+72403882 | None:intergenic |
| TGGATGTTTCCTCACTGAAA+GGG | 0.456264 | 7_2:-72401964 | Msa1074520:CDS |
| TTCAATTCAAGACCATTAAG+AGG | 0.459949 | 7_2:+72404223 | None:intergenic |
| AAGGTGTACATACTCATCTT+AGG | 0.461751 | 7_2:+72401600 | None:intergenic |
| ACCTTGTGTCTGGCTAGATA+TGG | 0.466509 | 7_2:-72401582 | Msa1074520:three_prime_UTR |
| CTTTCTTAAGAACTAGGATC+CGG | 0.474576 | 7_2:+72403820 | None:intergenic |
| TTGAGAAGCGCCTTCGTGAC+AGG | 0.480044 | 7_2:-72402801 | Msa1074520:intron |
| TCCATTGCATGACAAGGGTT+TGG | 0.480420 | 7_2:+72403866 | None:intergenic |
| TCTTCTCAGTAAAATGGTAA+TGG | 0.482341 | 7_2:+72403423 | None:intergenic |
| TTGACCGTAGTCTTGGAGAA+TGG | 0.486043 | 7_2:-72403986 | Msa1074520:intron |
| CTGTCCATGGTAATTTGTAT+GGG | 0.487223 | 7_2:-72403352 | Msa1074520:CDS |
| CTTGTTGATGACCTTCAGGA+TGG | 0.487351 | 7_2:-72404247 | Msa1074520:CDS |
| TCACCTCTAGAAACCATATC+TGG | 0.487464 | 7_2:+72403781 | None:intergenic |
| CGAGAAATATGGAGAAAGAT+GGG | 0.489516 | 7_2:-72403448 | Msa1074520:CDS |
| CCGAGAAATATGGAGAAAGA+TGG | 0.490569 | 7_2:-72403449 | Msa1074520:CDS |
| GTTTGACAGTATGTCACTGT+TGG | 0.492792 | 7_2:-72404047 | Msa1074520:intron |
| ATGGAGAAAGAGATCAAAAG+TGG | 0.501117 | 7_2:-72403395 | Msa1074520:CDS |
| GAGGTTGTTGCTTGGAGTAA+GGG | 0.507302 | 7_2:-72403605 | Msa1074520:CDS |
| GAGTATGTACACCTTGTGTC+TGG | 0.507450 | 7_2:-72401592 | Msa1074520:three_prime_UTR |
| CGAAAATGCGACGCTCGAAA+AGG | 0.510164 | 7_2:-72401817 | Msa1074520:three_prime_UTR |
| AAAGCGACTGCGTAATGCTC+AGG | 0.512562 | 7_2:-72402672 | Msa1074520:CDS |
| GGTCCTTCTGGAGTTGGTAA+AGG | 0.512799 | 7_2:-72403545 | Msa1074520:CDS |
| GTTTGGTGCCTAGCACAGTT+GGG | 0.517021 | 7_2:+72403883 | None:intergenic |
| ACTAATATCAATGCTCATGA+AGG | 0.517312 | 7_2:-72403519 | Msa1074520:CDS |
| GCTTGGAGTAAGGGTGTGAT+AGG | 0.517396 | 7_2:-72403596 | Msa1074520:CDS |
| CACATTATTATTCCCTGCAT+GGG | 0.519441 | 7_2:-72401699 | Msa1074520:three_prime_UTR |
| TCAAGGAGCAAGATCTGTTA+GGG | 0.522205 | 7_2:-72402878 | Msa1074520:CDS |
| GTCACTGTTGGAGCTGATGA+TGG | 0.527989 | 7_2:-72404035 | Msa1074520:CDS |
| TTGGATGTTTCCTCACTGAA+AGG | 0.528344 | 7_2:-72401965 | Msa1074520:CDS |
| GAAATTGACTTGAGTAGTGT+TGG | 0.530166 | 7_2:-72401728 | Msa1074520:three_prime_UTR |
| AGAGTGTTATGACAGACTTA+AGG | 0.531515 | 7_2:-72402585 | Msa1074520:intron |
| GTTGAAGTGGTAGCTGATGC+AGG | 0.538538 | 7_2:-72403314 | Msa1074520:CDS |
| TGGGGACTGAGGTTGTTGCT+TGG | 0.545642 | 7_2:-72403613 | Msa1074520:CDS |
| ACACATTATTATTCCCTGCA+TGG | 0.549652 | 7_2:-72401700 | Msa1074520:three_prime_UTR |
| TGCAAAACAACTACTGTCGT+TGG | 0.554632 | 7_2:-72404190 | Msa1074520:CDS |
| ACAAACCTTCAAGGGCAGGC+AGG | 0.555462 | 7_2:+72405215 | None:intergenic |
| TTGACTTGACAGGATCATGT+TGG | 0.561118 | 7_2:-72401984 | Msa1074520:intron |
| TCAAGCTCTTCCATTGATGG+TGG | 0.563601 | 7_2:+72402820 | None:intergenic |
| GGATGTTTCCTCACTGAAAG+GGG | 0.566805 | 7_2:-72401963 | Msa1074520:CDS |
| AGGGTTCACCCAACTGTGCT+AGG | 0.568022 | 7_2:-72403891 | Msa1074520:CDS |
| GGTGCACCTGGAAGGACAAG+AGG | 0.574956 | 7_2:-72401941 | Msa1074520:CDS |
| ATTATCTCATTGCCCATGCA+GGG | 0.577194 | 7_2:+72401687 | None:intergenic |
| AATGGTCTTGAATTGAACAA+TGG | 0.577419 | 7_2:-72404217 | Msa1074520:CDS |
| TCATTGGTGCAGAAATTACT+GGG | 0.585295 | 7_2:-72402493 | Msa1074520:intron |
| CATAAATAATCAAAGAACGC+TGG | 0.594521 | 7_2:+72401757 | None:intergenic |
| TTGTGTCTGGCTAGATATGG+TGG | 0.598625 | 7_2:-72401579 | Msa1074520:three_prime_UTR |
| ACCAAACCCTTGTCATGCAA+TGG | 0.601097 | 7_2:-72403867 | Msa1074520:CDS |
| AAACAGAGGGACTGAGACTG+AGG | 0.601275 | 7_2:-72402705 | Msa1074520:intron |
| CAGTGTTGAGGCTGTTGAAG+TGG | 0.604055 | 7_2:-72403327 | Msa1074520:CDS |
| CATTAAGAGGTCCATCCTGA+AGG | 0.605764 | 7_2:+72404236 | None:intergenic |
| TGAGTGTCCATTGCATGACA+AGG | 0.606716 | 7_2:+72403860 | None:intergenic |
| CTGACCATTCTCCAAGACTA+CGG | 0.617954 | 7_2:+72403982 | None:intergenic |
| GATGTTTCCTCACTGAAAGG+GGG | 0.625893 | 7_2:-72401962 | Msa1074520:CDS |
| CATCCTGAAGGTCATCAACA+AGG | 0.626232 | 7_2:+72404248 | None:intergenic |
| CACTTCAACAGCCTCAACAC+TGG | 0.628025 | 7_2:+72403328 | None:intergenic |
| GCTCAGGCTGAGATTGAGCA+AGG | 0.631772 | 7_2:-72402656 | Msa1074520:CDS |
| GAGGGTTTGAAGAAAATGTG+AGG | 0.636340 | 7_2:+72405137 | None:intergenic |
| GTTCCTTTACCAACTCCAGA+AGG | 0.638608 | 7_2:+72403542 | None:intergenic |
| TGACCAGATATGGTTTCTAG+AGG | 0.640137 | 7_2:-72403784 | Msa1074520:intron |
| GAGTGTCCATTGCATGACAA+GGG | 0.640152 | 7_2:+72403861 | None:intergenic |
| CTGAATATGTTAGACAGCAG+AGG | 0.642982 | 7_2:-72403643 | Msa1074520:CDS |
| CCACTACTCACCTGTCACGA+AGG | 0.647896 | 7_2:+72402791 | None:intergenic |
| TGGTCCCATACAAATTACCA+TGG | 0.653492 | 7_2:+72403348 | None:intergenic |
| AGGTCATCAACAAGGAACGC+TGG | 0.660018 | 7_2:+72404256 | None:intergenic |
| ACCATATCTAGCCAGACACA+AGG | 0.663931 | 7_2:+72401581 | None:intergenic |
| GAGAAATATGGAGAAAGATG+GGG | 0.669595 | 7_2:-72403447 | Msa1074520:CDS |
| TTTGTATGGGACCAGTGTTG+AGG | 0.692634 | 7_2:-72403339 | Msa1074520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGAATTTTTTTTAAATG+GGG | + | chr7_2:72401863-72401882 | None:intergenic | 10.0% |
| !!! | AAAACAAAATCATCTTTTTA+AGG | - | chr7_2:72401707-72401726 | Msa1074520:three_prime_UTR | 15.0% |
| !! | AATAATATATGTGAATTATG+AGG | - | chr7_2:72401986-72402005 | Msa1074520:intron | 15.0% |
| !! | ATAATATATGTGAATTATGA+GGG | - | chr7_2:72401987-72402006 | Msa1074520:intron | 15.0% |
| !! | AATACCATAACAATTATTAA+GGG | + | chr7_2:72402240-72402259 | None:intergenic | 15.0% |
| !!! | GGTATTCATATATTTTTTTA+TGG | - | chr7_2:72402254-72402273 | Msa1074520:intron | 15.0% |
| !!! | TAAATGCTAATTTGTTTTAT+TGG | - | chr7_2:72403079-72403098 | Msa1074520:intron | 15.0% |
| !!! | TTAATTTTTAAATATTCCAG+AGG | - | chr7_2:72403837-72403856 | Msa1074520:CDS | 15.0% |
| !!! | ATTAAGTTAAGACTAAATTT+TGG | + | chr7_2:72404026-72404045 | None:intergenic | 15.0% |
| !! | AAAAAATTCTTACCTAATTT+GGG | + | chr7_2:72404316-72404335 | None:intergenic | 15.0% |
| !! | AAAAAAATTCTTACCTAATT+TGG | + | chr7_2:72404317-72404336 | None:intergenic | 15.0% |
| !! | TTGTTAATTTATGAATCAAA+TGG | + | chr7_2:72404597-72404616 | None:intergenic | 15.0% |
| !! | AAACAAGTAAAGAAAATTAT+AGG | + | chr7_2:72404722-72404741 | None:intergenic | 15.0% |
| !! | ATAAAGCAAAAAGATGAAAA+AGG | + | chr7_2:72401651-72401670 | None:intergenic | 20.0% |
| !!! | AAAAAGATGATTTTGTTTTG+TGG | + | chr7_2:72401706-72401725 | None:intergenic | 20.0% |
| !! | ATTGAAAATTCAATAAACAG+AGG | + | chr7_2:72401901-72401920 | None:intergenic | 20.0% |
| !! | GAATACCATAACAATTATTA+AGG | + | chr7_2:72402241-72402260 | None:intergenic | 20.0% |
| !!! | TTTTTTATGGTTTTTTGTTC+AGG | - | chr7_2:72402267-72402286 | Msa1074520:intron | 20.0% |
| !!! | TTTTTATGGTTTTTTGTTCA+GGG | - | chr7_2:72402268-72402287 | Msa1074520:intron | 20.0% |
| !!! | TTTTTGTTTTAGGCATAAAT+TGG | + | chr7_2:72402677-72402696 | None:intergenic | 20.0% |
| !!! | TTTGTTACTGATATTCATTT+TGG | - | chr7_2:72402839-72402858 | Msa1074520:CDS | 20.0% |
| !!! | TAATTTGTTTTATTGGTACT+AGG | - | chr7_2:72403086-72403105 | Msa1074520:intron | 20.0% |
| !!! | AATTCATTTTATTTGAAGCT+TGG | - | chr7_2:72403507-72403526 | Msa1074520:CDS | 20.0% |
| !! | ATATTAGAACATTAAATCGT+GGG | - | chr7_2:72403530-72403549 | Msa1074520:CDS | 20.0% |
| !!! | AATCAATTCTAAAAACTTCA+AGG | + | chr7_2:72403659-72403678 | None:intergenic | 20.0% |
| !! | ATTAAGGAATTTCAATTTCA+GGG | + | chr7_2:72404634-72404653 | None:intergenic | 20.0% |
| !! | CAAAAGAACTAATATGATTA+AGG | + | chr7_2:72404650-72404669 | None:intergenic | 20.0% |
| !!! | CTTAATCATATTAGTTCTTT+TGG | - | chr7_2:72404648-72404667 | Msa1074520:intron | 20.0% |
| !! | GAAATTAACAAAATTCCAAA+AGG | + | chr7_2:72404678-72404697 | None:intergenic | 20.0% |
| !!! | TTTGGAATTTTGTTAATTTC+AGG | - | chr7_2:72404678-72404697 | Msa1074520:intron | 20.0% |
| !! | TTGATTTTACAAACCTTCAA+GGG | + | chr7_2:72401554-72401573 | None:intergenic | 25.0% |
| ! | AGGAAGAAATTCATATTTGT+AGG | + | chr7_2:72401604-72401623 | None:intergenic | 25.0% |
| ! | AAAGATGAAAAAGGAAAAGA+GGG | + | chr7_2:72401642-72401661 | None:intergenic | 25.0% |
| ! | AAAAGATGAAAAAGGAAAAG+AGG | + | chr7_2:72401643-72401662 | None:intergenic | 25.0% |
| ! | AAAAAGATGAAATCTTGAAG+AGG | + | chr7_2:72401785-72401804 | None:intergenic | 25.0% |
| !!! | TTTTCAATGTTAGTCTAGTT+TGG | - | chr7_2:72401913-72401932 | Msa1074520:CDS | 25.0% |
| ! | GATCAGAATGATTCATATAA+TGG | - | chr7_2:72402009-72402028 | Msa1074520:intron | 25.0% |
| ! | ATAAAAGAAATCATCAAGCT+TGG | + | chr7_2:72402043-72402062 | None:intergenic | 25.0% |
| ! | CATGTTGAATATTCTGTATA+TGG | - | chr7_2:72402128-72402147 | Msa1074520:intron | 25.0% |
| ! | AGATCCCTTAATAATTGTTA+TGG | - | chr7_2:72402233-72402252 | Msa1074520:intron | 25.0% |
| ! | TATAGACACATATTTCTCTA+TGG | - | chr7_2:72402304-72402323 | Msa1074520:intron | 25.0% |
| ! | GAATTTGTGATGATTAAATG+TGG | - | chr7_2:72402411-72402430 | Msa1074520:intron | 25.0% |
| ! | TCTATTTGATTGTGATCAAT+AGG | - | chr7_2:72402471-72402490 | Msa1074520:CDS | 25.0% |
| ! | CTATTTGATTGTGATCAATA+GGG | - | chr7_2:72402472-72402491 | Msa1074520:CDS | 25.0% |
| ! | TTTATGCCTAAAACAAAAAC+CGG | - | chr7_2:72402678-72402697 | Msa1074520:CDS | 25.0% |
| ! | GATATTAGAACATTAAATCG+TGG | - | chr7_2:72403529-72403548 | Msa1074520:CDS | 25.0% |
| ! | ATTCTTGATATTGATGTTCA+AGG | - | chr7_2:72403863-72403882 | Msa1074520:CDS | 25.0% |
| !!! | ACTTAATGTTTTGAAAACAG+AGG | - | chr7_2:72404039-72404058 | Msa1074520:CDS | 25.0% |
| !!! | CTTAATGTTTTGAAAACAGA+GGG | - | chr7_2:72404040-72404059 | Msa1074520:CDS | 25.0% |
| ! | CTGAAAATTTACATTCAGTT+TGG | + | chr7_2:72404346-72404365 | None:intergenic | 25.0% |
| ! | TACGATTTAAGAAACGAAAT+TGG | + | chr7_2:72404565-72404584 | None:intergenic | 25.0% |
| ! | GATTAAGGAATTTCAATTTC+AGG | + | chr7_2:72404635-72404654 | None:intergenic | 25.0% |
| !!! | TTTACTTGTTTTAGCACTAT+AGG | - | chr7_2:72404731-72404750 | Msa1074520:intron | 25.0% |
| !!! | TTACTTGTTTTAGCACTATA+GGG | - | chr7_2:72404732-72404751 | Msa1074520:intron | 25.0% |
| !! | GTTGATTTTACAAACCTTCA+AGG | + | chr7_2:72401555-72401574 | None:intergenic | 30.0% |
| TGTAGGCTCAAAAGAAAAAA+GGG | + | chr7_2:72401587-72401606 | None:intergenic | 30.0% | |
| TTGTAGGCTCAAAAGAAAAA+AGG | + | chr7_2:72401588-72401607 | None:intergenic | 30.0% | |
| ! | TTTTTGTTCAGGGTTTAATC+AGG | - | chr7_2:72402278-72402297 | Msa1074520:intron | 30.0% |
| ! | TTTTGTTCAGGGTTTAATCA+GGG | - | chr7_2:72402279-72402298 | Msa1074520:intron | 30.0% |
| ATGATATAGCATGGAATAGA+AGG | + | chr7_2:72402345-72402364 | None:intergenic | 30.0% | |
| TGTAACTCAATGATATAGCA+TGG | + | chr7_2:72402354-72402373 | None:intergenic | 30.0% | |
| TGATTAAATGTGGATCAAAG+TGG | - | chr7_2:72402421-72402440 | Msa1074520:intron | 30.0% | |
| TTCAATTCAAGACCATTAAG+AGG | + | chr7_2:72402538-72402557 | None:intergenic | 30.0% | |
| ! | AATGGTCTTGAATTGAACAA+TGG | - | chr7_2:72402541-72402560 | Msa1074520:intron | 30.0% |
| TTATGCCTAAAACAAAAACC+GGG | - | chr7_2:72402679-72402698 | Msa1074520:CDS | 30.0% | |
| GTCAAAAATTTGAACGTCAA+TGG | + | chr7_2:72402757-72402776 | None:intergenic | 30.0% | |
| ! | TGATATTCATTTTGGATTGC+AGG | - | chr7_2:72402847-72402866 | Msa1074520:CDS | 30.0% |
| ! | GATATTCATTTTGGATTGCA+GGG | - | chr7_2:72402848-72402867 | Msa1074520:CDS | 30.0% |
| !!! | TTTGTTTTATTGGTACTAGG+TGG | - | chr7_2:72403089-72403108 | Msa1074520:intron | 30.0% |
| ! | GAGAAACCTATTGTTATTAG+TGG | - | chr7_2:72403192-72403211 | Msa1074520:intron | 30.0% |
| ACTAATATCAATGCTCATGA+AGG | - | chr7_2:72403239-72403258 | Msa1074520:intron | 30.0% | |
| TCTTCTCAGTAAAATGGTAA+TGG | + | chr7_2:72403338-72403357 | None:intergenic | 30.0% | |
| TGTCGAAATCTATGGTAATT+TGG | + | chr7_2:72403579-72403598 | None:intergenic | 30.0% | |
| GGTAAGAAATTGTCGTAATT+CGG | + | chr7_2:72403810-72403829 | None:intergenic | 30.0% | |
| !!! | TAAGAACTTTTTCAGGATTG+AGG | + | chr7_2:72404225-72404244 | None:intergenic | 30.0% |
| !! | AGGATGATAAGAACTTTTTC+AGG | + | chr7_2:72404232-72404251 | None:intergenic | 30.0% |
| CCAATGAACATACGTATATT+AGG | + | chr7_2:72404252-72404271 | None:intergenic | 30.0% | |
| CCTAATATACGTATGTTCAT+TGG | - | chr7_2:72404249-72404268 | Msa1074520:CDS | 30.0% | |
| TTCAGTTTATAAAGCCATGA+AGG | - | chr7_2:72404361-72404380 | Msa1074520:intron | 30.0% | |
| CATGTTAGTATTTACCTTCA+TGG | + | chr7_2:72404378-72404397 | None:intergenic | 30.0% | |
| GTTTCTTAAATCGTAGACAT+TGG | - | chr7_2:72404570-72404589 | Msa1074520:intron | 30.0% | |
| ATGAAAAACCAAGTTAGTTG+TGG | + | chr7_2:72404903-72404922 | None:intergenic | 30.0% | |
| CATAAATAATCAAAGAACGC+TGG | + | chr7_2:72405004-72405023 | None:intergenic | 30.0% | |
| CAGCGTTCTTTGATTATTTA+TGG | - | chr7_2:72405002-72405021 | Msa1074520:intron | 30.0% | |
| !! | TGTTTCTGTTTTCTTTGTGG+GGG | + | chr7_2:72401516-72401535 | None:intergenic | 35.0% |
| !!! | CTGTTTCTGTTTTCTTTGTG+GGG | + | chr7_2:72401517-72401536 | None:intergenic | 35.0% |
| !!! | CCTGTTTCTGTTTTCTTTGT+GGG | + | chr7_2:72401518-72401537 | None:intergenic | 35.0% |
| !!! | ACCTGTTTCTGTTTTCTTTG+TGG | + | chr7_2:72401519-72401538 | None:intergenic | 35.0% |
| TAGGCTCAAAAGAAAAAAGG+GGG | + | chr7_2:72401585-72401604 | None:intergenic | 35.0% | |
| GTAGGCTCAAAAGAAAAAAG+GGG | + | chr7_2:72401586-72401605 | None:intergenic | 35.0% | |
| ! | TCTTTTTACACATTGCGATC+TGG | - | chr7_2:72401798-72401817 | Msa1074520:three_prime_UTR | 35.0% |
| ! | CTTTTTACACATTGCGATCT+GGG | - | chr7_2:72401799-72401818 | Msa1074520:three_prime_UTR | 35.0% |
| ! | CAATGTTAGTCTAGTTTGGT+TGG | - | chr7_2:72401917-72401936 | Msa1074520:CDS | 35.0% |
| GTGACATACTGTCAAACAAA+CGG | + | chr7_2:72402708-72402727 | None:intergenic | 35.0% | |
| ! | CAAATTTTTGACCGTAGTCT+TGG | - | chr7_2:72402765-72402784 | Msa1074520:intron | 35.0% |
| CTTTCTTAAGAACTAGGATC+CGG | + | chr7_2:72402941-72402960 | None:intergenic | 35.0% | |
| TGGAACCTTTCTTAAGAACT+AGG | + | chr7_2:72402947-72402966 | None:intergenic | 35.0% | |
| TAGACAGCAGAGGAAAAAAT+TGG | - | chr7_2:72403125-72403144 | Msa1074520:intron | 35.0% | |
| AGACAGCAGAGGAAAAAATT+GGG | - | chr7_2:72403126-72403145 | Msa1074520:intron | 35.0% | |
| GAAGGACCACTAATAACAAT+AGG | + | chr7_2:72403201-72403220 | None:intergenic | 35.0% | |
| ! | ATTGTTATTAGTGGTCCTTC+TGG | - | chr7_2:72403201-72403220 | Msa1074520:intron | 35.0% |
| CAGAAAAACCAAACATCGAA+GGG | + | chr7_2:72403269-72403288 | None:intergenic | 35.0% | |
| ACAGAAAAACCAAACATCGA+AGG | + | chr7_2:72403270-72403289 | None:intergenic | 35.0% | |
| CCATCTTTCTCCATATTTCT+CGG | + | chr7_2:72403312-72403331 | None:intergenic | 35.0% | |
| CGAGAAATATGGAGAAAGAT+GGG | - | chr7_2:72403310-72403329 | Msa1074520:CDS | 35.0% | |
| GAGAAATATGGAGAAAGATG+GGG | - | chr7_2:72403311-72403330 | Msa1074520:CDS | 35.0% | |
| TCACACTCTTCTCAGTAAAA+TGG | + | chr7_2:72403344-72403363 | None:intergenic | 35.0% | |
| !! | TTTTACTGAGAAGAGTGTGA+TGG | - | chr7_2:72403344-72403363 | Msa1074520:CDS | 35.0% |
| ATGGAGAAAGAGATCAAAAG+TGG | - | chr7_2:72403363-72403382 | Msa1074520:CDS | 35.0% | |
| ! | TCTGTCCATGGTAATTTGTA+TGG | - | chr7_2:72403405-72403424 | Msa1074520:CDS | 35.0% |
| ! | CTGTCCATGGTAATTTGTAT+GGG | - | chr7_2:72403406-72403425 | Msa1074520:CDS | 35.0% |
| TTCATTCTGAGTTCAGCTAA+AGG | - | chr7_2:72403612-72403631 | Msa1074520:CDS | 35.0% | |
| AATCCACAGTTCAGCAATAA+TGG | + | chr7_2:72403738-72403757 | None:intergenic | 35.0% | |
| TGGACAGACAAAGATGAATA+TGG | + | chr7_2:72403921-72403940 | None:intergenic | 35.0% | |
| ! | AGAGTGTTATGACAGACTTA+AGG | - | chr7_2:72404173-72404192 | Msa1074520:intron | 35.0% |
| TTCATTGGTGCAGAAATTAC+TGG | - | chr7_2:72404264-72404283 | Msa1074520:CDS | 35.0% | |
| TCATTGGTGCAGAAATTACT+GGG | - | chr7_2:72404265-72404284 | Msa1074520:CDS | 35.0% | |
| ! | GTTGGTAGATTAATCTCTCT+AGG | + | chr7_2:72404425-72404444 | None:intergenic | 35.0% |
| TTAGACACTGAATGATCTGT+TGG | + | chr7_2:72404443-72404462 | None:intergenic | 35.0% | |
| ! | AGTTCTTTTGGATGACCTTT+TGG | - | chr7_2:72404660-72404679 | Msa1074520:intron | 35.0% |
| !!! | TGTTTTAGCACTATAGGGTA+AGG | - | chr7_2:72404737-72404756 | Msa1074520:intron | 35.0% |
| !! | GATCTTGTATTTGACTTGAC+AGG | - | chr7_2:72404764-72404783 | Msa1074520:intron | 35.0% |
| !!! | GGACTTGATTTTCAAGTCAT+AGG | - | chr7_2:72404838-72404857 | Msa1074520:intron | 35.0% |
| AACTTTAGCCACAACTAACT+TGG | - | chr7_2:72404892-72404911 | Msa1074520:intron | 35.0% | |
| !! | GAAATTGACTTGAGTAGTGT+TGG | - | chr7_2:72405030-72405049 | Msa1074520:five_prime_UTR | 35.0% |
| ACACATTATTATTCCCTGCA+TGG | - | chr7_2:72405058-72405077 | Msa1074520:five_prime_UTR | 35.0% | |
| CACATTATTATTCCCTGCAT+GGG | - | chr7_2:72405059-72405078 | Msa1074520:five_prime_UTR | 35.0% | |
| AAGGTGTACATACTCATCTT+AGG | + | chr7_2:72405161-72405180 | None:intergenic | 35.0% | |
| CCCACAAAGAAAACAGAAAC+AGG | - | chr7_2:72401515-72401534 | Msa1074520:three_prime_UTR | 40.0% | |
| ! | TTTTACAAACCTTCAAGGGC+AGG | + | chr7_2:72401550-72401569 | None:intergenic | 40.0% |
| GAGGGTTTGAAGAAAATGTG+AGG | + | chr7_2:72401624-72401643 | None:intergenic | 40.0% | |
| CGTTCTTGCTTCGTTTCTTA+AGG | - | chr7_2:72401750-72401769 | Msa1074520:three_prime_UTR | 40.0% | |
| TCATCAACTTCCAGGAAAAC+AGG | + | chr7_2:72402081-72402100 | None:intergenic | 40.0% | |
| !! | TCCTGGAAGTTGATGAAATC+TGG | - | chr7_2:72402085-72402104 | Msa1074520:intron | 40.0% |
| !! | CCTGGAAGTTGATGAAATCT+GGG | - | chr7_2:72402086-72402105 | Msa1074520:intron | 40.0% |
| TGCAAAACAACTACTGTCGT+TGG | - | chr7_2:72402568-72402587 | Msa1074520:intron | 40.0% | |
| TACTGTCGTTGGCGAAAAAA+CGG | - | chr7_2:72402579-72402598 | Msa1074520:intron | 40.0% | |
| ACATACTGTCAAACAAACGG+AGG | + | chr7_2:72402705-72402724 | None:intergenic | 40.0% | |
| GTTTGACAGTATGTCACTGT+TGG | - | chr7_2:72402711-72402730 | Msa1074520:intron | 40.0% | |
| !!! | GCCTCATAGCTGTTTTTGTA+AGG | - | chr7_2:72402813-72402832 | Msa1074520:CDS | 40.0% |
| GCCTTACAAAAACAGCTATG+AGG | + | chr7_2:72402817-72402836 | None:intergenic | 40.0% | |
| ! | CGGATCCTAGTTCTTAAGAA+AGG | - | chr7_2:72402939-72402958 | Msa1074520:intron | 40.0% |
| CCATATCTGGTCATCTGATT+TGG | + | chr7_2:72402967-72402986 | None:intergenic | 40.0% | |
| CCAAATCAGATGACCAGATA+TGG | - | chr7_2:72402964-72402983 | Msa1074520:intron | 40.0% | |
| ! | TGACCAGATATGGTTTCTAG+AGG | - | chr7_2:72402974-72402993 | Msa1074520:intron | 40.0% |
| ! | TCACCTCTAGAAACCATATC+TGG | + | chr7_2:72402980-72402999 | None:intergenic | 40.0% |
| CTGAATATGTTAGACAGCAG+AGG | - | chr7_2:72403115-72403134 | Msa1074520:intron | 40.0% | |
| GACAGCAGAGGAAAAAATTG+GGG | - | chr7_2:72403127-72403146 | Msa1074520:intron | 40.0% | |
| AAGGAATTCCCTTCGATGTT+TGG | - | chr7_2:72403258-72403277 | Msa1074520:intron | 40.0% | |
| CCGAGAAATATGGAGAAAGA+TGG | - | chr7_2:72403309-72403328 | Msa1074520:intron | 40.0% | |
| TGGTCCCATACAAATTACCA+TGG | + | chr7_2:72403413-72403432 | None:intergenic | 40.0% | |
| ACATTAAATCGTGGGTACAC+TGG | - | chr7_2:72403538-72403557 | Msa1074520:CDS | 40.0% | |
| GCAAGACTTGTCGAAATCTA+TGG | + | chr7_2:72403587-72403606 | None:intergenic | 40.0% | |
| CCTTACATTCTCGAAGTCAT+AGG | + | chr7_2:72403696-72403715 | None:intergenic | 40.0% | |
| CCTATGACTTCGAGAATGTA+AGG | - | chr7_2:72403693-72403712 | Msa1074520:intron | 40.0% | |
| ! | GTGGATTATAGCGTTGTTAG+AGG | - | chr7_2:72403751-72403770 | Msa1074520:intron | 40.0% |
| AACCTCTCATTACGTTGTTG+TGG | - | chr7_2:72403782-72403801 | Msa1074520:intron | 40.0% | |
| AACCACAACAACGTAATGAG+AGG | + | chr7_2:72403787-72403806 | None:intergenic | 40.0% | |
| CAATATCAAGAATGCACCTC+TGG | + | chr7_2:72403856-72403875 | None:intergenic | 40.0% | |
| TTCAAGGAGCAAGATCTGTT+AGG | - | chr7_2:72403879-72403898 | Msa1074520:CDS | 40.0% | |
| TCAAGGAGCAAGATCTGTTA+GGG | - | chr7_2:72403880-72403899 | Msa1074520:CDS | 40.0% | |
| TTCTCAAGCTCTTCCATTGA+TGG | + | chr7_2:72403944-72403963 | None:intergenic | 40.0% | |
| GTCTGTCATAACACTCTTCA+AGG | + | chr7_2:72404170-72404189 | None:intergenic | 40.0% | |
| ! | GAGGAAGTTTTTGCTTTAGC+AGG | + | chr7_2:72404206-72404225 | None:intergenic | 40.0% |
| CAGAAATTACTGGGACTTGA+TGG | - | chr7_2:72404274-72404293 | Msa1074520:intron | 40.0% | |
| ATCATAAGCTGCATCTCTTC+TGG | - | chr7_2:72404479-72404498 | Msa1074520:intron | 40.0% | |
| ! | TTGACTTGACAGGATCATGT+TGG | - | chr7_2:72404774-72404793 | Msa1074520:intron | 40.0% |
| TTGGATGTTTCCTCACTGAA+AGG | - | chr7_2:72404793-72404812 | Msa1074520:intron | 40.0% | |
| TGGATGTTTCCTCACTGAAA+GGG | - | chr7_2:72404794-72404813 | Msa1074520:intron | 40.0% | |
| ATTATCTCATTGCCCATGCA+GGG | + | chr7_2:72405074-72405093 | None:intergenic | 40.0% | |
| AATTATCTCATTGCCCATGC+AGG | + | chr7_2:72405075-72405094 | None:intergenic | 40.0% | |
| GCTCAAAAGAAAAAAGGGGG+CGG | + | chr7_2:72401582-72401601 | None:intergenic | 45.0% | |
| !! | TTGTGTTGCTCCTGTTTTCC+TGG | - | chr7_2:72402068-72402087 | Msa1074520:intron | 45.0% |
| CCCAGATTTCATCAACTTCC+AGG | + | chr7_2:72402089-72402108 | None:intergenic | 45.0% | |
| !! | GTTCCTTGTTGATGACCTTC+AGG | - | chr7_2:72402507-72402526 | Msa1074520:intron | 45.0% |
| CATCCTGAAGGTCATCAACA+AGG | + | chr7_2:72402513-72402532 | None:intergenic | 45.0% | |
| !! | CTTGTTGATGACCTTCAGGA+TGG | - | chr7_2:72402511-72402530 | Msa1074520:intron | 45.0% |
| CATTAAGAGGTCCATCCTGA+AGG | + | chr7_2:72402525-72402544 | None:intergenic | 45.0% | |
| CTTCAGGATGGACCTCTTAA+TGG | - | chr7_2:72402523-72402542 | Msa1074520:intron | 45.0% | |
| ! | TTGACCGTAGTCTTGGAGAA+TGG | - | chr7_2:72402772-72402791 | Msa1074520:intron | 45.0% |
| CTGACCATTCTCCAAGACTA+CGG | + | chr7_2:72402779-72402798 | None:intergenic | 45.0% | |
| ACCAAACCCTTGTCATGCAA+TGG | - | chr7_2:72402891-72402910 | Msa1074520:CDS | 45.0% | |
| TCCATTGCATGACAAGGGTT+TGG | + | chr7_2:72402895-72402914 | None:intergenic | 45.0% | |
| GAGTGTCCATTGCATGACAA+GGG | + | chr7_2:72402900-72402919 | None:intergenic | 45.0% | |
| TGAGTGTCCATTGCATGACA+AGG | + | chr7_2:72402901-72402920 | None:intergenic | 45.0% | |
| ! | GATCCGGTTTTCGAAAAGCA+CGG | + | chr7_2:72402925-72402944 | None:intergenic | 45.0% |
| GAGGAAAAAATTGGGGACTG+AGG | - | chr7_2:72403134-72403153 | Msa1074520:intron | 45.0% | |
| ! | TGAGGTTGTTGCTTGGAGTA+AGG | - | chr7_2:72403152-72403171 | Msa1074520:intron | 45.0% |
| ! | GAGGTTGTTGCTTGGAGTAA+GGG | - | chr7_2:72403153-72403172 | Msa1074520:intron | 45.0% |
| !! | ATTAGTGGTCCTTCTGGAGT+TGG | - | chr7_2:72403207-72403226 | Msa1074520:intron | 45.0% |
| GTTCCTTTACCAACTCCAGA+AGG | + | chr7_2:72403219-72403238 | None:intergenic | 45.0% | |
| TCTCCATATTTCTCGGAGCA+CGG | + | chr7_2:72403305-72403324 | None:intergenic | 45.0% | |
| ! | CTCGAATTTGCTTCTGTCCA+TGG | - | chr7_2:72403393-72403412 | Msa1074520:CDS | 45.0% |
| TTTGTATGGGACCAGTGTTG+AGG | - | chr7_2:72403419-72403438 | Msa1074520:CDS | 45.0% | |
| GAGCCATTATTGCTGAACTG+TGG | - | chr7_2:72403732-72403751 | Msa1074520:intron | 45.0% | |
| CTTTGTCTGTCCACCATCAA+TGG | - | chr7_2:72403928-72403947 | Msa1074520:intron | 45.0% | |
| TCAAGCTCTTCCATTGATGG+TGG | + | chr7_2:72403941-72403960 | None:intergenic | 45.0% | |
| GTTGCAACTGCACCCAAATT+AGG | - | chr7_2:72404301-72404320 | Msa1074520:intron | 45.0% | |
| ! | TTAATCTCTCTAGGTGCTGC+TGG | + | chr7_2:72404416-72404435 | None:intergenic | 45.0% |
| CATCTCTTCTGGACTTGACA+AGG | - | chr7_2:72404490-72404509 | Msa1074520:intron | 45.0% | |
| GGATGTTTCCTCACTGAAAG+GGG | - | chr7_2:72404795-72404814 | Msa1074520:intron | 45.0% | |
| GATGTTTCCTCACTGAAAGG+GGG | - | chr7_2:72404796-72404815 | Msa1074520:intron | 45.0% | |
| GAGTATGTACACCTTGTGTC+TGG | - | chr7_2:72405166-72405185 | Msa1074520:five_prime_UTR | 45.0% | |
| ACCTTGTGTCTGGCTAGATA+TGG | - | chr7_2:72405176-72405195 | Msa1074520:five_prime_UTR | 45.0% | |
| ACCATATCTAGCCAGACACA+AGG | + | chr7_2:72405180-72405199 | None:intergenic | 45.0% | |
| TTGTGTCTGGCTAGATATGG+TGG | - | chr7_2:72405179-72405198 | Msa1074520:five_prime_UTR | 45.0% | |
| !!! | AAAATGAATTTTTTTTAAAT+GGG | + | chr7_2:72401864-72401883 | None:intergenic | 5.0% |
| !!! | AAAAATGAATTTTTTTTAAA+TGG | + | chr7_2:72401865-72401884 | None:intergenic | 5.0% |
| !! | TATTTAAAAATTAAAATATC+AGG | + | chr7_2:72403831-72403850 | None:intergenic | 5.0% |
| AGGTCATCAACAAGGAACGC+TGG | + | chr7_2:72402505-72402524 | None:intergenic | 50.0% | |
| !!! | GGAGGCCCGGTTTTTGTTTT+AGG | + | chr7_2:72402687-72402706 | None:intergenic | 50.0% |
| GTCACTGTTGGAGCTGATGA+TGG | - | chr7_2:72402723-72402742 | Msa1074520:intron | 50.0% | |
| !! | GTTTGGTGCCTAGCACAGTT+GGG | + | chr7_2:72402878-72402897 | None:intergenic | 50.0% |
| ! | CAGCCGTGCTTTTCGAAAAC+CGG | - | chr7_2:72402919-72402938 | Msa1074520:intron | 50.0% |
| ! | GCTTGGAGTAAGGGTGTGAT+AGG | - | chr7_2:72403162-72403181 | Msa1074520:intron | 50.0% |
| !! | GGTCCTTCTGGAGTTGGTAA+AGG | - | chr7_2:72403213-72403232 | Msa1074520:intron | 50.0% |
| AACCCGTGCTCCGAGAAATA+TGG | - | chr7_2:72403299-72403318 | Msa1074520:intron | 50.0% | |
| CTCCATATTTCTCGGAGCAC+GGG | + | chr7_2:72403304-72403323 | None:intergenic | 50.0% | |
| CACTTCAACAGCCTCAACAC+TGG | + | chr7_2:72403433-72403452 | None:intergenic | 50.0% | |
| ! | CAGTGTTGAGGCTGTTGAAG+TGG | - | chr7_2:72403431-72403450 | Msa1074520:CDS | 50.0% |
| GTTGAAGTGGTAGCTGATGC+AGG | - | chr7_2:72403444-72403463 | Msa1074520:CDS | 50.0% | |
| AAACAGAGGGACTGAGACTG+AGG | - | chr7_2:72404053-72404072 | Msa1074520:intron | 50.0% | |
| ! | GAGCATTACGCAGTCGCTTT+AGG | + | chr7_2:72404086-72404105 | None:intergenic | 50.0% |
| AAAGCGACTGCGTAATGCTC+AGG | - | chr7_2:72404086-72404105 | Msa1074520:intron | 50.0% | |
| TCAAGTCCTCTTGTCCTTCC+AGG | + | chr7_2:72404826-72404845 | None:intergenic | 50.0% | |
| CGAAAATGCGACGCTCGAAA+AGG | - | chr7_2:72404941-72404960 | Msa1074520:intron | 50.0% | |
| ACAAACCTTCAAGGGCAGGC+AGG | + | chr7_2:72401546-72401565 | None:intergenic | 55.0% | |
| CTGTCAAACAAACGGAGGCC+CGG | + | chr7_2:72402700-72402719 | None:intergenic | 55.0% | |
| AGGGTTCACCCAACTGTGCT+AGG | - | chr7_2:72402867-72402886 | Msa1074520:CDS | 55.0% | |
| !! | GGTTTGGTGCCTAGCACAGT+TGG | + | chr7_2:72402879-72402898 | None:intergenic | 55.0% |
| TGGGGACTGAGGTTGTTGCT+TGG | - | chr7_2:72403145-72403164 | Msa1074520:intron | 55.0% | |
| ATCGTGGGTACACTGGTGTG+TGG | - | chr7_2:72403545-72403564 | Msa1074520:CDS | 55.0% | |
| !! | TTGAGAAGCGCCTTCGTGAC+AGG | - | chr7_2:72403957-72403976 | Msa1074520:intron | 55.0% |
| CCACTACTCACCTGTCACGA+AGG | + | chr7_2:72403970-72403989 | None:intergenic | 55.0% | |
| CCTTCGTGACAGGTGAGTAG+TGG | - | chr7_2:72403967-72403986 | Msa1074520:intron | 55.0% | |
| GCTCAGGCTGAGATTGAGCA+AGG | - | chr7_2:72404102-72404121 | Msa1074520:intron | 55.0% | |
| AGGTGCACCCCCTTTCAGTG+AGG | + | chr7_2:72404806-72404825 | None:intergenic | 60.0% | |
| ! | TCACTGAAAGGGGGTGCACC+TGG | - | chr7_2:72404805-72404824 | Msa1074520:intron | 60.0% |
| ! | TGAAAGGGGGTGCACCTGGA+AGG | - | chr7_2:72404809-72404828 | Msa1074520:intron | 60.0% |
| GGTGCACCTGGAAGGACAAG+AGG | - | chr7_2:72404817-72404836 | Msa1074520:intron | 60.0% | |
| TCCTGCCTGCCTGCCCTTGA+AGG | - | chr7_2:72401538-72401557 | Msa1074520:three_prime_UTR | 65.0% | |
| ACCTTCAAGGGCAGGCAGGC+AGG | + | chr7_2:72401542-72401561 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 72401491 | 72405289 | 72401491 | ID=Msa1074520;Name=Msa1074520 |
| chr7_2 | mRNA | 72401491 | 72405289 | 72401491 | ID=Msa1074520-mRNA-1;Parent=Msa1074520;Name=Msa1074520-mRNA-1;_AED=0.11;_eAED=0.11;_QI=315|0.88|0.9|1|0.66|0.7|10|407|363 |
| chr7_2 | exon | 72401491 | 72401994 | 72401491 | ID=Msa1074520-mRNA-1:exon:16694;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72402442 | 72402503 | 72402442 | ID=Msa1074520-mRNA-1:exon:16693;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72402586 | 72402721 | 72402586 | ID=Msa1074520-mRNA-1:exon:16692;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72402802 | 72402923 | 72402802 | ID=Msa1074520-mRNA-1:exon:16691;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72403310 | 72403672 | 72403310 | ID=Msa1074520-mRNA-1:exon:16690;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72403785 | 72403911 | 72403785 | ID=Msa1074520-mRNA-1:exon:16689;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72403987 | 72404060 | 72403987 | ID=Msa1074520-mRNA-1:exon:16688;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72404180 | 72404287 | 72404180 | ID=Msa1074520-mRNA-1:exon:16687;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72404455 | 72404491 | 72404455 | ID=Msa1074520-mRNA-1:exon:16686;Parent=Msa1074520-mRNA-1 |
| chr7_2 | exon | 72405009 | 72405289 | 72405009 | ID=Msa1074520-mRNA-1:exon:16685;Parent=Msa1074520-mRNA-1 |
| chr7_2 | five_prime_UTR | 72405009 | 72405289 | 72405009 | ID=Msa1074520-mRNA-1:five_prime_utr;Parent=Msa1074520-mRNA-1 |
| chr7_2 | five_prime_UTR | 72404458 | 72404491 | 72404458 | ID=Msa1074520-mRNA-1:five_prime_utr;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72404455 | 72404457 | 72404455 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72404180 | 72404287 | 72404180 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72403987 | 72404060 | 72403987 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72403785 | 72403911 | 72403785 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72403310 | 72403672 | 72403310 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72402802 | 72402923 | 72402802 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72402586 | 72402721 | 72402586 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72402442 | 72402503 | 72402442 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | CDS | 72401898 | 72401994 | 72401898 | ID=Msa1074520-mRNA-1:cds;Parent=Msa1074520-mRNA-1 |
| chr7_2 | three_prime_UTR | 72401491 | 72401897 | 72401491 | ID=Msa1074520-mRNA-1:three_prime_utr;Parent=Msa1074520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
