Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034720 | KEH23662.1 | 100.000 | 36 | 0 | 0 | 3 | 38 | 2 | 37 | 1.77e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034720 | A0A072U1T9 | 100.000 | 36 | 0 | 0 | 3 | 38 | 2 | 37 | 8.44e-16 | 79.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa1034720 | 0.810546 | 1.092277e-50 | -8.615850e-47 |
| Msa0007850 | Msa1034720 | 0.823726 | 1.185754e-53 | -8.615850e-47 |
| Msa0010770 | Msa1034720 | 0.811819 | 5.783664e-51 | -8.615850e-47 |
| Msa0030300 | Msa1034720 | 0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0033880 | Msa1034720 | 0.840298 | 9.457712e-58 | -8.615850e-47 |
| Msa0038000 | Msa1034720 | 0.811011 | 8.665471e-51 | -8.615850e-47 |
| Msa0039250 | Msa1034720 | 0.801117 | 1.047638e-48 | -8.615850e-47 |
| Msa0041690 | Msa1034720 | 0.802283 | 6.038319e-49 | -8.615850e-47 |
| Msa0043500 | Msa1034720 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
| Msa0047640 | Msa1034720 | 0.823925 | 1.065023e-53 | -8.615850e-47 |
| Msa0049780 | Msa1034720 | 0.801609 | 8.305490e-49 | -8.615850e-47 |
| Msa0056270 | Msa1034720 | 0.822578 | 2.198068e-53 | -8.615850e-47 |
| Msa0070430 | Msa1034720 | 0.827173 | 1.810757e-54 | -8.615850e-47 |
| Msa0077900 | Msa1034720 | 0.830710 | 2.519218e-55 | -8.615850e-47 |
| Msa0097950 | Msa1034720 | 0.838273 | 3.171376e-57 | -8.615850e-47 |
| Msa0108870 | Msa1034720 | 0.826895 | 2.110129e-54 | -8.615850e-47 |
| Msa0606810 | Msa1034720 | 0.804042 | 2.611794e-49 | -8.615850e-47 |
| Msa0614510 | Msa1034720 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
| Msa0618950 | Msa1034720 | 0.803429 | 3.500988e-49 | -8.615850e-47 |
| Msa0619860 | Msa1034720 | 0.803806 | 2.924610e-49 | -8.615850e-47 |
| Msa0628420 | Msa1034720 | 0.821053 | 4.954392e-53 | -8.615850e-47 |
| Msa0633570 | Msa1034720 | 0.823830 | 1.121498e-53 | -8.615850e-47 |
| Msa0644030 | Msa1034720 | 0.829568 | 4.786993e-55 | -8.615850e-47 |
| Msa0652690 | Msa1034720 | 0.809558 | 1.783608e-50 | -8.615850e-47 |
| Msa0654870 | Msa1034720 | 0.805372 | 1.377838e-49 | -8.615850e-47 |
| Msa0658480 | Msa1034720 | 0.801567 | 8.471082e-49 | -8.615850e-47 |
| Msa0659790 | Msa1034720 | 0.831210 | 1.899536e-55 | -8.615850e-47 |
| Msa0659990 | Msa1034720 | 0.804146 | 2.485287e-49 | -8.615850e-47 |
| Msa0679100 | Msa1034720 | 0.814642 | 1.388477e-51 | -8.615850e-47 |
| Msa0687230 | Msa1034720 | 0.801517 | 8.673914e-49 | -8.615850e-47 |
| Msa0699780 | Msa1034720 | 0.802375 | 5.780740e-49 | -8.615850e-47 |
| Msa0705390 | Msa1034720 | 0.806212 | 9.177461e-50 | -8.615850e-47 |
| Msa0743530 | Msa1034720 | 0.814895 | 1.220322e-51 | -8.615850e-47 |
| Msa0744090 | Msa1034720 | 0.800913 | 1.153223e-48 | -8.615850e-47 |
| Msa0744100 | Msa1034720 | 0.837073 | 6.445509e-57 | -8.615850e-47 |
| Msa0744180 | Msa1034720 | 0.805808 | 1.116237e-49 | -8.615850e-47 |
| Msa0756930 | Msa1034720 | 0.812758 | 3.608912e-51 | -8.615850e-47 |
| Msa0788120 | Msa1034720 | 0.823179 | 1.592531e-53 | -8.615850e-47 |
| Msa0818770 | Msa1034720 | 0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0822170 | Msa1034720 | 0.830676 | 2.568001e-55 | -8.615850e-47 |
| Msa0822180 | Msa1034720 | 0.819867 | 9.266937e-53 | -8.615850e-47 |
| Msa0825270 | Msa1034720 | 0.845256 | 4.550144e-59 | -8.615850e-47 |
| Msa0825280 | Msa1034720 | 0.803372 | 3.596942e-49 | -8.615850e-47 |
| Msa0126880 | Msa1034720 | 0.819442 | 1.159123e-52 | -8.615850e-47 |
| Msa0127850 | Msa1034720 | 0.844625 | 6.734636e-59 | -8.615850e-47 |
| Msa0146080 | Msa1034720 | 0.841438 | 4.751317e-58 | -8.615850e-47 |
| Msa0147980 | Msa1034720 | 0.806097 | 9.707699e-50 | -8.615850e-47 |
| Msa0171850 | Msa1034720 | 0.800011 | 1.760516e-48 | -8.615850e-47 |
| Msa0174000 | Msa1034720 | 0.845875 | 3.090669e-59 | -8.615850e-47 |
| Msa0193600 | Msa1034720 | 0.804802 | 1.813740e-49 | -8.615850e-47 |
| Msa0198520 | Msa1034720 | 0.813507 | 2.472191e-51 | -8.615850e-47 |
| Msa0198530 | Msa1034720 | 0.824638 | 7.242537e-54 | -8.615850e-47 |
| Msa0221600 | Msa1034720 | 0.801043 | 1.084506e-48 | -8.615850e-47 |
| Msa0223230 | Msa1034720 | 0.801714 | 7.905351e-49 | -8.615850e-47 |
| Msa0237200 | Msa1034720 | 0.801396 | 9.183091e-49 | -8.615850e-47 |
| Msa0378970 | Msa1034720 | 0.831383 | 1.722446e-55 | -8.615850e-47 |
| Msa0384670 | Msa1034720 | 0.854695 | 1.036968e-61 | -8.615850e-47 |
| Msa0392200 | Msa1034720 | 0.819714 | 1.004725e-52 | -8.615850e-47 |
| Msa0416960 | Msa1034720 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0419720 | Msa1034720 | 0.802606 | 5.180151e-49 | -8.615850e-47 |
| Msa0434570 | Msa1034720 | 0.851513 | 8.454218e-61 | -8.615850e-47 |
| Msa0434770 | Msa1034720 | 0.857937 | 1.161108e-62 | -8.615850e-47 |
| Msa0439890 | Msa1034720 | 0.815233 | 1.026949e-51 | -8.615850e-47 |
| Msa0474700 | Msa1034720 | 0.812224 | 4.721608e-51 | -8.615850e-47 |
| Msa0474940 | Msa1034720 | 0.806163 | 9.398648e-50 | -8.615850e-47 |
| Msa0478580 | Msa1034720 | 0.853629 | 2.105544e-61 | -8.615850e-47 |
| Msa0480780 | Msa1034720 | 0.819705 | 1.009394e-52 | -8.615850e-47 |
| Msa0980940 | Msa1034720 | 0.835044 | 2.109992e-56 | -8.615850e-47 |
| Msa0981430 | Msa1034720 | 0.814435 | 1.542666e-51 | -8.615850e-47 |
| Msa1017510 | Msa1034720 | 0.818587 | 1.813030e-52 | -8.615850e-47 |
| Msa1025940 | Msa1034720 | 0.803557 | 3.293853e-49 | -8.615850e-47 |
| Msa1034720 | Msa1068100 | 0.800462 | 1.425261e-48 | -8.615850e-47 |
| Msa1034720 | Msa1070390 | 0.828753 | 7.545295e-55 | -8.615850e-47 |
| Msa1034720 | Msa1074520 | 0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa1034720 | Msa1089270 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa1034720 | Msa1115050 | 0.811699 | 6.144878e-51 | -8.615850e-47 |
| Msa1034720 | Msa1123350 | 0.845054 | 5.158121e-59 | -8.615850e-47 |
| Msa1034720 | Msa1127590 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa1034720 | Msa1128330 | 0.804741 | 1.867241e-49 | -8.615850e-47 |
| Msa1034720 | Msa1133400 | 0.811915 | 5.512652e-51 | -8.615850e-47 |
| Msa1034720 | Msa1145240 | 0.841334 | 5.062114e-58 | -8.615850e-47 |
| Msa1034720 | Msa1158230 | 0.821631 | 3.644266e-53 | -8.615850e-47 |
| Msa1034720 | Msa1158770 | 0.818046 | 2.403950e-52 | -8.615850e-47 |
| Msa1034720 | Msa1162080 | 0.939926 | 5.574025e-100 | -8.615850e-47 |
| Msa1034720 | Msa1165490 | 0.800320 | 1.522997e-48 | -8.615850e-47 |
| Msa1034720 | Msa1179980 | 0.807364 | 5.241110e-50 | -8.615850e-47 |
| Msa1034720 | Msa1201830 | 0.820142 | 8.019252e-53 | -8.615850e-47 |
| Msa1034720 | Msa1206160 | 0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa1034720 | Msa1206650 | 0.852161 | 5.534643e-61 | -8.615850e-47 |
| Msa1034720 | Msa1207730 | 0.821066 | 4.919092e-53 | -8.615850e-47 |
| Msa1034720 | Msa1227690 | 0.809952 | 1.467350e-50 | -8.615850e-47 |
| Msa1034720 | Msa1258780 | 0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa1034720 | Msa1270620 | 0.806578 | 7.686367e-50 | -8.615850e-47 |
| Msa1034720 | Msa1270690 | 0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa1034720 | Msa1294840 | 0.821769 | 3.384869e-53 | -8.615850e-47 |
| Msa1034720 | Msa1298100 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
| Msa1034720 | Msa1307180 | 0.803830 | 2.891332e-49 | -8.615850e-47 |
| Msa1034720 | Msa1330270 | 0.821684 | 3.543082e-53 | -8.615850e-47 |
| Msa1034720 | Msa1344310 | 0.825781 | 3.888112e-54 | -8.615850e-47 |
| Msa1034720 | Msa1355700 | 0.800107 | 1.683383e-48 | -8.615850e-47 |
| Msa1034720 | Msa1356610 | 0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa1034720 | Msa1364160 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa1034720 | Msa1369890 | 0.809927 | 1.485785e-50 | -8.615850e-47 |
| Msa1034720 | Msa1373820 | 0.820002 | 8.632060e-53 | -8.615850e-47 |
| Msa1034720 | Msa1376200 | 0.803570 | 3.273597e-49 | -8.615850e-47 |
| Msa1034720 | Msa1385810 | 0.825740 | 3.974667e-54 | -8.615850e-47 |
| Msa1034720 | Msa1409260 | 0.826509 | 2.609753e-54 | -8.615850e-47 |
| Msa1034720 | Msa1411950 | 0.825270 | 5.135435e-54 | -8.615850e-47 |
| Msa1034720 | Msa1432130 | 0.801734 | 7.830435e-49 | -8.615850e-47 |
| Msa1034720 | Msa1432480 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa1034720 | Msa1435440 | 0.806847 | 6.742082e-50 | -8.615850e-47 |
| Msa1034720 | Msa1435770 | 0.815942 | 7.139184e-52 | -8.615850e-47 |
| Msa1034720 | Msa1462470 | 0.830997 | 2.142245e-55 | -8.615850e-47 |
| Msa0245580 | Msa1034720 | 0.808691 | 2.734818e-50 | -8.615850e-47 |
| Msa0247060 | Msa1034720 | 0.830862 | 2.311611e-55 | -8.615850e-47 |
| Msa0262480 | Msa1034720 | 0.817918 | 2.570279e-52 | -8.615850e-47 |
| Msa0273650 | Msa1034720 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0274100 | Msa1034720 | 0.806704 | 7.229876e-50 | -8.615850e-47 |
| Msa0291520 | Msa1034720 | 0.814146 | 1.787612e-51 | -8.615850e-47 |
| Msa0300350 | Msa1034720 | 0.807896 | 4.039681e-50 | -8.615850e-47 |
| Msa0324240 | Msa1034720 | 0.819750 | 9.856081e-53 | -8.615850e-47 |
| Msa0342290 | Msa1034720 | 0.802134 | 6.478858e-49 | -8.615850e-47 |
| Msa0343190 | Msa1034720 | 0.804763 | 1.848117e-49 | -8.615850e-47 |
| Msa0346990 | Msa1034720 | 0.812965 | 3.251441e-51 | -8.615850e-47 |
| Msa0359600 | Msa1034720 | 0.808400 | 3.155311e-50 | -8.615850e-47 |
| Msa0363060 | Msa1034720 | 0.820890 | 5.399950e-53 | -8.615850e-47 |
| Msa0509120 | Msa1034720 | 0.811689 | 6.175966e-51 | -8.615850e-47 |
| Msa0511770 | Msa1034720 | 0.820334 | 7.244521e-53 | -8.615850e-47 |
| Msa0514610 | Msa1034720 | 0.820872 | 5.450625e-53 | -8.615850e-47 |
| Msa0531250 | Msa1034720 | 0.813110 | 3.020619e-51 | -8.615850e-47 |
| Msa0547990 | Msa1034720 | 0.845414 | 4.121717e-59 | -8.615850e-47 |
| Msa0550570 | Msa1034720 | 0.825822 | 3.800262e-54 | -8.615850e-47 |
| Msa0569780 | Msa1034720 | 0.801074 | 1.068633e-48 | -8.615850e-47 |
| Msa0583500 | Msa1034720 | 0.830158 | 3.436841e-55 | -8.615850e-47 |
| Msa0588090 | Msa1034720 | 0.800947 | 1.134924e-48 | -8.615850e-47 |
| Msa0593700 | Msa1034720 | 0.828240 | 1.003349e-54 | -8.615850e-47 |
| Msa0851470 | Msa1034720 | 0.801372 | 9.287312e-49 | -8.615850e-47 |
| Msa0858440 | Msa1034720 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa0864420 | Msa1034720 | 0.824551 | 7.590653e-54 | -8.615850e-47 |
| Msa0888940 | Msa1034720 | 0.818808 | 1.615457e-52 | -8.615850e-47 |
| Msa0928120 | Msa1034720 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0943170 | Msa1034720 | 0.810000 | 1.432943e-50 | -8.615850e-47 |
| Msa0945240 | Msa1034720 | 0.818499 | 1.899060e-52 | -8.615850e-47 |
| Msa0963020 | Msa1034720 | 0.803666 | 3.126348e-49 | -8.615850e-47 |
| Msa0968440 | Msa1034720 | 0.818967 | 1.486741e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1034720 | MtrunA17_Chr7g0257781 | 100.000 | 36 | 0 | 0 | 3 | 38 | 2 | 37 | 1.98e-19 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 99 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCGTTCTTTGATTATTTA+TGG | 0.084174 | 7_1:+70313315 | Msa1034720:three_prime_UTR |
| GTTGCAACTGCACCCAAATT+AGG | 0.227947 | 7_1:+70312614 | Msa1034720:three_prime_UTR |
| CTTCAGGATGGACCTCTTAA+TGG | 0.276233 | 7_1:+70310836 | Msa1034720:CDS |
| ATTGTTATTAGTGGTCCTTC+TGG | 0.288971 | 7_1:+70311514 | Msa1034720:three_prime_UTR |
| TTCTCAAGCTCTTCCATTGA+TGG | 0.297823 | 7_1:-70312254 | None:intergenic |
| GAGCATTACGCAGTCGCTTT+AGG | 0.302663 | 7_1:-70312396 | None:intergenic |
| CCATATCTGGTCATCTGATT+TGG | 0.313449 | 7_1:-70311277 | None:intergenic |
| CCATCTTTCTCCATATTTCT+CGG | 0.318499 | 7_1:-70311622 | None:intergenic |
| TCACACTCTTCTCAGTAAAA+TGG | 0.321682 | 7_1:-70311654 | None:intergenic |
| CCAAATCAGATGACCAGATA+TGG | 0.340254 | 7_1:+70311277 | Msa1034720:three_prime_UTR |
| AAGGAATTCCCTTCGATGTT+TGG | 0.340728 | 7_1:+70311571 | Msa1034720:three_prime_UTR |
| TCAAGTCCTCTTGTCCTTCC+AGG | 0.345102 | 7_1:-70313136 | None:intergenic |
| AACCCGTGCTCCGAGAAATA+TGG | 0.350022 | 7_1:+70311612 | Msa1034720:three_prime_UTR |
| CAGAAATTACTGGGACTTGA+TGG | 0.358399 | 7_1:+70312587 | Msa1034720:intron |
| GTTCCTTGTTGATGACCTTC+AGG | 0.367183 | 7_1:+70310820 | Msa1034720:CDS |
| ATCATAAGCTGCATCTCTTC+TGG | 0.369022 | 7_1:+70312792 | Msa1034720:three_prime_UTR |
| TTCATTGGTGCAGAAATTAC+TGG | 0.369583 | 7_1:+70312577 | Msa1034720:intron |
| TCTGTCCATGGTAATTTGTA+TGG | 0.376553 | 7_1:+70311718 | Msa1034720:three_prime_UTR |
| CTCGAATTTGCTTCTGTCCA+TGG | 0.403156 | 7_1:+70311706 | Msa1034720:three_prime_UTR |
| GAGAAACCTATTGTTATTAG+TGG | 0.405407 | 7_1:+70311505 | Msa1034720:three_prime_UTR |
| ATTCTTGATATTGATGTTCA+AGG | 0.419974 | 7_1:+70312176 | Msa1034720:three_prime_UTR |
| TTCAAGGAGCAAGATCTGTT+AGG | 0.421033 | 7_1:+70312192 | Msa1034720:three_prime_UTR |
| GTCTGTCATAACACTCTTCA+AGG | 0.422735 | 7_1:-70312480 | None:intergenic |
| TGAGGTTGTTGCTTGGAGTA+AGG | 0.423659 | 7_1:+70311465 | Msa1034720:three_prime_UTR |
| TGGACAGACAAAGATGAATA+TGG | 0.427437 | 7_1:-70312231 | None:intergenic |
| TGGAACCTTTCTTAAGAACT+AGG | 0.427990 | 7_1:-70311257 | None:intergenic |
| CTTTGTCTGTCCACCATCAA+TGG | 0.430337 | 7_1:+70312241 | Msa1034720:three_prime_UTR |
| GAAGGACCACTAATAACAAT+AGG | 0.431055 | 7_1:-70311511 | None:intergenic |
| ATTAGTGGTCCTTCTGGAGT+TGG | 0.435618 | 7_1:+70311520 | Msa1034720:three_prime_UTR |
| AACTTTAGCCACAACTAACT+TGG | 0.441501 | 7_1:+70313205 | Msa1034720:three_prime_UTR |
| CTCCATATTTCTCGGAGCAC+GGG | 0.445632 | 7_1:-70311614 | None:intergenic |
| CGGATCCTAGTTCTTAAGAA+AGG | 0.451808 | 7_1:+70311252 | Msa1034720:exon |
| TCTCCATATTTCTCGGAGCA+CGG | 0.454075 | 7_1:-70311615 | None:intergenic |
| AATTATCTCATTGCCCATGC+AGG | 0.455168 | 7_1:-70313385 | None:intergenic |
| GGTTTGGTGCCTAGCACAGT+TGG | 0.455219 | 7_1:-70311189 | None:intergenic |
| TGGATGTTTCCTCACTGAAA+GGG | 0.456264 | 7_1:+70313107 | Msa1034720:three_prime_UTR |
| TTCAATTCAAGACCATTAAG+AGG | 0.459949 | 7_1:-70310848 | None:intergenic |
| AAGGTGTACATACTCATCTT+AGG | 0.461751 | 7_1:-70313471 | None:intergenic |
| ACCTTGTGTCTGGCTAGATA+TGG | 0.466509 | 7_1:+70313489 | Msa1034720:three_prime_UTR |
| CTTTCTTAAGAACTAGGATC+CGG | 0.474576 | 7_1:-70311251 | None:intergenic |
| TTGAGAAGCGCCTTCGTGAC+AGG | 0.480044 | 7_1:+70312270 | Msa1034720:three_prime_UTR |
| TCCATTGCATGACAAGGGTT+TGG | 0.480420 | 7_1:-70311205 | None:intergenic |
| TCTTCTCAGTAAAATGGTAA+TGG | 0.482341 | 7_1:-70311648 | None:intergenic |
| CTGTCCATGGTAATTTGTAT+GGG | 0.487223 | 7_1:+70311719 | Msa1034720:three_prime_UTR |
| CTTGTTGATGACCTTCAGGA+TGG | 0.487351 | 7_1:+70310824 | Msa1034720:CDS |
| TCACCTCTAGAAACCATATC+TGG | 0.487464 | 7_1:-70311290 | None:intergenic |
| CGAGAAATATGGAGAAAGAT+GGG | 0.489516 | 7_1:+70311623 | Msa1034720:three_prime_UTR |
| CCGAGAAATATGGAGAAAGA+TGG | 0.490569 | 7_1:+70311622 | Msa1034720:three_prime_UTR |
| ATGGAGAAAGAGATCAAAAG+TGG | 0.501117 | 7_1:+70311676 | Msa1034720:three_prime_UTR |
| GAGGTTGTTGCTTGGAGTAA+GGG | 0.507302 | 7_1:+70311466 | Msa1034720:three_prime_UTR |
| GAGTATGTACACCTTGTGTC+TGG | 0.507450 | 7_1:+70313479 | Msa1034720:three_prime_UTR |
| CGAAAATGCGACGCTCGAAA+AGG | 0.510164 | 7_1:+70313254 | Msa1034720:three_prime_UTR |
| AAAGCGACTGCGTAATGCTC+AGG | 0.512562 | 7_1:+70312399 | Msa1034720:three_prime_UTR |
| GGTCCTTCTGGAGTTGGTAA+AGG | 0.512799 | 7_1:+70311526 | Msa1034720:three_prime_UTR |
| GTTTGGTGCCTAGCACAGTT+GGG | 0.517021 | 7_1:-70311188 | None:intergenic |
| ACTAATATCAATGCTCATGA+AGG | 0.517312 | 7_1:+70311552 | Msa1034720:three_prime_UTR |
| GCTTGGAGTAAGGGTGTGAT+AGG | 0.517396 | 7_1:+70311475 | Msa1034720:three_prime_UTR |
| CACATTATTATTCCCTGCAT+GGG | 0.519441 | 7_1:+70313372 | Msa1034720:three_prime_UTR |
| TCAAGGAGCAAGATCTGTTA+GGG | 0.522205 | 7_1:+70312193 | Msa1034720:three_prime_UTR |
| TTAGACACTGAATGATCTGT+TGG | 0.523783 | 7_1:-70312753 | None:intergenic |
| TTGGATGTTTCCTCACTGAA+AGG | 0.528344 | 7_1:+70313106 | Msa1034720:three_prime_UTR |
| GAAATTGACTTGAGTAGTGT+TGG | 0.530166 | 7_1:+70313343 | Msa1034720:three_prime_UTR |
| AGAGTGTTATGACAGACTTA+AGG | 0.531515 | 7_1:+70312486 | Msa1034720:three_prime_UTR |
| GTTGAAGTGGTAGCTGATGC+AGG | 0.538538 | 7_1:+70311757 | Msa1034720:three_prime_UTR |
| CTGAATATGTTAGGCAGCAG+AGG | 0.539132 | 7_1:+70311428 | Msa1034720:three_prime_UTR |
| AGGTGGACACTGAATATGTT+AGG | 0.540338 | 7_1:+70311419 | Msa1034720:intron |
| TGGGGACTGAGGTTGTTGCT+TGG | 0.545642 | 7_1:+70311458 | Msa1034720:three_prime_UTR |
| GTTGGTAGATTAATCTCTCT+AGG | 0.546143 | 7_1:-70312735 | None:intergenic |
| ACACATTATTATTCCCTGCA+TGG | 0.549652 | 7_1:+70313371 | Msa1034720:three_prime_UTR |
| TGCAAAACAACTACTGTCGT+TGG | 0.554632 | 7_1:+70310881 | Msa1034720:CDS |
| TCAAGCTCTTCCATTGATGG+TGG | 0.563601 | 7_1:-70312251 | None:intergenic |
| GGATGTTTCCTCACTGAAAG+GGG | 0.566805 | 7_1:+70313108 | Msa1034720:three_prime_UTR |
| AGGGTTCACCCAACTGTGCT+AGG | 0.568022 | 7_1:+70311180 | Msa1034720:intron |
| TTGACTTGACAGGATCATGT+TGG | 0.568536 | 7_1:+70313087 | Msa1034720:intron |
| CATCTCTTCTGGACTTGACA+AGG | 0.573859 | 7_1:+70312803 | Msa1034720:three_prime_UTR |
| GGTGCACCTGGAAGGACAAG+AGG | 0.574956 | 7_1:+70313130 | Msa1034720:three_prime_UTR |
| ATTATCTCATTGCCCATGCA+GGG | 0.577194 | 7_1:-70313384 | None:intergenic |
| AATGGTCTTGAATTGAACAA+TGG | 0.577419 | 7_1:+70310854 | Msa1034720:CDS |
| TCATTGGTGCAGAAATTACT+GGG | 0.585295 | 7_1:+70312578 | Msa1034720:intron |
| CATAAATAATCAAAGAACGC+TGG | 0.594521 | 7_1:-70313314 | None:intergenic |
| TTGTGTCTGGCTAGATATGG+TGG | 0.598625 | 7_1:+70313492 | Msa1034720:three_prime_UTR |
| ACCAAACCCTTGTCATGCAA+TGG | 0.601097 | 7_1:+70311204 | Msa1034720:CDS |
| AAACAGAGGGACTGAGACTG+AGG | 0.601275 | 7_1:+70312366 | Msa1034720:intron |
| CAGTGTTGAGGCTGTTGAAG+TGG | 0.604055 | 7_1:+70311744 | Msa1034720:three_prime_UTR |
| CATTAAGAGGTCCATCCTGA+AGG | 0.605764 | 7_1:-70310835 | None:intergenic |
| TGAGTGTCCATTGCATGACA+AGG | 0.606716 | 7_1:-70311211 | None:intergenic |
| GATGTTTCCTCACTGAAAGG+GGG | 0.625893 | 7_1:+70313109 | Msa1034720:three_prime_UTR |
| CATCCTGAAGGTCATCAACA+AGG | 0.626232 | 7_1:-70310823 | None:intergenic |
| CACTTCAACAGCCTCAACAC+TGG | 0.628025 | 7_1:-70311743 | None:intergenic |
| GCTCAGGCTGAGATTGAGCA+AGG | 0.631772 | 7_1:+70312415 | Msa1034720:three_prime_UTR |
| GTTCCTTTACCAACTCCAGA+AGG | 0.638608 | 7_1:-70311529 | None:intergenic |
| TGACCAGATATGGTTTCTAG+AGG | 0.640137 | 7_1:+70311287 | Msa1034720:three_prime_UTR |
| GAGTGTCCATTGCATGACAA+GGG | 0.640152 | 7_1:-70311210 | None:intergenic |
| CCACTACTCACCTGTCACGA+AGG | 0.647896 | 7_1:-70312280 | None:intergenic |
| TGGTCCCATACAAATTACCA+TGG | 0.653492 | 7_1:-70311723 | None:intergenic |
| AGGTCATCAACAAGGAACGC+TGG | 0.660018 | 7_1:-70310815 | None:intergenic |
| ACCATATCTAGCCAGACACA+AGG | 0.663931 | 7_1:-70313490 | None:intergenic |
| GAGAAATATGGAGAAAGATG+GGG | 0.669595 | 7_1:+70311624 | Msa1034720:three_prime_UTR |
| TTTGTATGGGACCAGTGTTG+AGG | 0.692634 | 7_1:+70311732 | Msa1034720:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACCATAACAATTATTAA+GGG | - | chr7_1:70310553-70310572 | None:intergenic | 15.0% |
| !!! | GGTATTCATATATTTTTTTA+TGG | + | chr7_1:70310567-70310586 | Msa1034720:intron | 15.0% |
| !!! | TAAATGCTAATTTGTTTTAT+TGG | + | chr7_1:70311392-70311411 | Msa1034720:intron | 15.0% |
| !!! | TTAATTTTTAAATATTCCAG+AGG | + | chr7_1:70312150-70312169 | Msa1034720:intron | 15.0% |
| !!! | ATTAAGTTAAGACTAAATTT+TGG | - | chr7_1:70312339-70312358 | None:intergenic | 15.0% |
| !! | AAAAAATTCTTACCTAATTT+GGG | - | chr7_1:70312629-70312648 | None:intergenic | 15.0% |
| !! | AAAAAAATTCTTACCTAATT+TGG | - | chr7_1:70312630-70312649 | None:intergenic | 15.0% |
| !! | TTGTTAATTTATGAATCAAA+TGG | - | chr7_1:70312910-70312929 | None:intergenic | 15.0% |
| !! | AAACAAGTAAAGAAAATTAT+AGG | - | chr7_1:70313035-70313054 | None:intergenic | 15.0% |
| !! | GAATACCATAACAATTATTA+AGG | - | chr7_1:70310554-70310573 | None:intergenic | 20.0% |
| !!! | TTTTTTATGGTTTTTTGTTC+AGG | + | chr7_1:70310580-70310599 | Msa1034720:intron | 20.0% |
| !!! | TTTTTATGGTTTTTTGTTCA+GGG | + | chr7_1:70310581-70310600 | Msa1034720:intron | 20.0% |
| !!! | TTTTTGTTTTAGGCATAAAT+TGG | - | chr7_1:70310990-70311009 | None:intergenic | 20.0% |
| !!! | TTTGTTACTGATATTCATTT+TGG | + | chr7_1:70311152-70311171 | Msa1034720:intron | 20.0% |
| !!! | TAATTTGTTTTATTGGTACT+AGG | + | chr7_1:70311399-70311418 | Msa1034720:intron | 20.0% |
| !!! | AATTCATTTTATTTGAAGCT+TGG | + | chr7_1:70311820-70311839 | Msa1034720:intron | 20.0% |
| !! | ATATTAGAACATTAAATCGT+GGG | + | chr7_1:70311843-70311862 | Msa1034720:intron | 20.0% |
| !!! | ATCAATTCTAAAAACTTCAA+GGG | - | chr7_1:70311971-70311990 | None:intergenic | 20.0% |
| !!! | AATCAATTCTAAAAACTTCA+AGG | - | chr7_1:70311972-70311991 | None:intergenic | 20.0% |
| !! | ATTAAGGAATTTCAATTTCA+GGG | - | chr7_1:70312947-70312966 | None:intergenic | 20.0% |
| !! | CAAAAGAACTAATATGATTA+AGG | - | chr7_1:70312963-70312982 | None:intergenic | 20.0% |
| !!! | CTTAATCATATTAGTTCTTT+TGG | + | chr7_1:70312961-70312980 | Msa1034720:intron | 20.0% |
| !! | GAAATTAACAAAATTCCAAA+AGG | - | chr7_1:70312991-70313010 | None:intergenic | 20.0% |
| !!! | TTTGGAATTTTGTTAATTTC+AGG | + | chr7_1:70312991-70313010 | Msa1034720:intron | 20.0% |
| ! | AGATCCCTTAATAATTGTTA+TGG | + | chr7_1:70310546-70310565 | Msa1034720:intron | 25.0% |
| ! | TATAGACACATATTTCTCTA+TGG | + | chr7_1:70310617-70310636 | Msa1034720:intron | 25.0% |
| ! | GAATTTGTGATGATTAAATG+TGG | + | chr7_1:70310724-70310743 | Msa1034720:intron | 25.0% |
| ! | TCTATTTGATTGTGATCAAT+AGG | + | chr7_1:70310784-70310803 | Msa1034720:intron | 25.0% |
| ! | CTATTTGATTGTGATCAATA+GGG | + | chr7_1:70310785-70310804 | Msa1034720:intron | 25.0% |
| ! | TTTATGCCTAAAACAAAAAC+CGG | + | chr7_1:70310991-70311010 | Msa1034720:intron | 25.0% |
| ! | GTCAAAAATTTGAACATCAA+TGG | - | chr7_1:70311070-70311089 | None:intergenic | 25.0% |
| ! | GATATTAGAACATTAAATCG+TGG | + | chr7_1:70311842-70311861 | Msa1034720:intron | 25.0% |
| ! | GGTAAGAAATTGTTGTAATT+CGG | - | chr7_1:70312123-70312142 | None:intergenic | 25.0% |
| ! | ATTCTTGATATTGATGTTCA+AGG | + | chr7_1:70312176-70312195 | Msa1034720:three_prime_UTR | 25.0% |
| !!! | ACTTAATGTTTTGAAAACAG+AGG | + | chr7_1:70312352-70312371 | Msa1034720:intron | 25.0% |
| !!! | CTTAATGTTTTGAAAACAGA+GGG | + | chr7_1:70312353-70312372 | Msa1034720:intron | 25.0% |
| ! | CTGAAAATTTACATTCAGTT+TGG | - | chr7_1:70312659-70312678 | None:intergenic | 25.0% |
| ! | TACGATTTAAGAAACGAAAT+TGG | - | chr7_1:70312878-70312897 | None:intergenic | 25.0% |
| ! | GATTAAGGAATTTCAATTTC+AGG | - | chr7_1:70312948-70312967 | None:intergenic | 25.0% |
| ! | TTTTTGTTCAGGGTTTAATC+AGG | + | chr7_1:70310591-70310610 | Msa1034720:intron | 30.0% |
| ! | TTTTGTTCAGGGTTTAATCA+GGG | + | chr7_1:70310592-70310611 | Msa1034720:intron | 30.0% |
| ATGAAATAGCATGGAATAGA+AGG | - | chr7_1:70310658-70310677 | None:intergenic | 30.0% | |
| TGTAACTCAATGAAATAGCA+TGG | - | chr7_1:70310667-70310686 | None:intergenic | 30.0% | |
| TGATTAAATGTGGATCAAAG+TGG | + | chr7_1:70310734-70310753 | Msa1034720:intron | 30.0% | |
| TTCAATTCAAGACCATTAAG+AGG | - | chr7_1:70310851-70310870 | None:intergenic | 30.0% | |
| ! | AATGGTCTTGAATTGAACAA+TGG | + | chr7_1:70310854-70310873 | Msa1034720:CDS | 30.0% |
| TTATGCCTAAAACAAAAACC+GGG | + | chr7_1:70310992-70311011 | Msa1034720:intron | 30.0% | |
| ! | TGATATTCATTTTGGATTGC+AGG | + | chr7_1:70311160-70311179 | Msa1034720:intron | 30.0% |
| ! | GATATTCATTTTGGATTGCA+GGG | + | chr7_1:70311161-70311180 | Msa1034720:intron | 30.0% |
| !!! | TTTGTTTTATTGGTACTAGG+TGG | + | chr7_1:70311402-70311421 | Msa1034720:intron | 30.0% |
| ! | GAGAAACCTATTGTTATTAG+TGG | + | chr7_1:70311505-70311524 | Msa1034720:three_prime_UTR | 30.0% |
| ACTAATATCAATGCTCATGA+AGG | + | chr7_1:70311552-70311571 | Msa1034720:three_prime_UTR | 30.0% | |
| TCTTCTCAGTAAAATGGTAA+TGG | - | chr7_1:70311651-70311670 | None:intergenic | 30.0% | |
| TCGAGAAATCTATGGTAATT+TGG | - | chr7_1:70311892-70311911 | None:intergenic | 30.0% | |
| !!! | TAAGAACTTTTTCAGGATTG+AGG | - | chr7_1:70312538-70312557 | None:intergenic | 30.0% |
| !! | AGGATGATAAGAACTTTTTC+AGG | - | chr7_1:70312545-70312564 | None:intergenic | 30.0% |
| CCAATGAACATACGTATATT+AGG | - | chr7_1:70312565-70312584 | None:intergenic | 30.0% | |
| CCTAATATACGTATGTTCAT+TGG | + | chr7_1:70312562-70312581 | Msa1034720:intron | 30.0% | |
| TTCAGTTTATAAAGCCATGA+AGG | + | chr7_1:70312674-70312693 | Msa1034720:intron | 30.0% | |
| GTTTCTTAAATCGTAGACAT+TGG | + | chr7_1:70312883-70312902 | Msa1034720:intron | 30.0% | |
| !!! | TTTACTTGTTTTAGCACTCA+AGG | + | chr7_1:70313044-70313063 | Msa1034720:intron | 30.0% |
| !!! | TTACTTGTTTTAGCACTCAA+GGG | + | chr7_1:70313045-70313064 | Msa1034720:intron | 30.0% |
| ATGAAAAACCAAGTTAGTTG+TGG | - | chr7_1:70313216-70313235 | None:intergenic | 30.0% | |
| CATAAATAATCAAAGAACGC+TGG | - | chr7_1:70313317-70313336 | None:intergenic | 30.0% | |
| CAGCGTTCTTTGATTATTTA+TGG | + | chr7_1:70313315-70313334 | Msa1034720:three_prime_UTR | 30.0% | |
| GTGACATACTGTCAAACAAA+CGG | - | chr7_1:70311021-70311040 | None:intergenic | 35.0% | |
| ! | CAAATTTTTGACCGTAGTCT+TGG | + | chr7_1:70311078-70311097 | Msa1034720:intron | 35.0% |
| CTTTCTTAAGAACTAGGATC+CGG | - | chr7_1:70311254-70311273 | None:intergenic | 35.0% | |
| TGGAACCTTTCTTAAGAACT+AGG | - | chr7_1:70311260-70311279 | None:intergenic | 35.0% | |
| GAAGGACCACTAATAACAAT+AGG | - | chr7_1:70311514-70311533 | None:intergenic | 35.0% | |
| ! | ATTGTTATTAGTGGTCCTTC+TGG | + | chr7_1:70311514-70311533 | Msa1034720:three_prime_UTR | 35.0% |
| CAGAAAAACCAAACATCGAA+GGG | - | chr7_1:70311582-70311601 | None:intergenic | 35.0% | |
| ACAGAAAAACCAAACATCGA+AGG | - | chr7_1:70311583-70311602 | None:intergenic | 35.0% | |
| CCATCTTTCTCCATATTTCT+CGG | - | chr7_1:70311625-70311644 | None:intergenic | 35.0% | |
| CGAGAAATATGGAGAAAGAT+GGG | + | chr7_1:70311623-70311642 | Msa1034720:three_prime_UTR | 35.0% | |
| GAGAAATATGGAGAAAGATG+GGG | + | chr7_1:70311624-70311643 | Msa1034720:three_prime_UTR | 35.0% | |
| TCACACTCTTCTCAGTAAAA+TGG | - | chr7_1:70311657-70311676 | None:intergenic | 35.0% | |
| !! | TTTTACTGAGAAGAGTGTGA+TGG | + | chr7_1:70311657-70311676 | Msa1034720:three_prime_UTR | 35.0% |
| ATGGAGAAAGAGATCAAAAG+TGG | + | chr7_1:70311676-70311695 | Msa1034720:three_prime_UTR | 35.0% | |
| ! | TCTGTCCATGGTAATTTGTA+TGG | + | chr7_1:70311718-70311737 | Msa1034720:three_prime_UTR | 35.0% |
| ! | CTGTCCATGGTAATTTGTAT+GGG | + | chr7_1:70311719-70311738 | Msa1034720:three_prime_UTR | 35.0% |
| TTCATTCTGAGTTCAGCTAA+AGG | + | chr7_1:70311925-70311944 | Msa1034720:intron | 35.0% | |
| AATCCACAGTTCAGCAATAA+TGG | - | chr7_1:70312051-70312070 | None:intergenic | 35.0% | |
| TGGACAGACAAAGATGAATA+TGG | - | chr7_1:70312234-70312253 | None:intergenic | 35.0% | |
| ! | AGAGTGTTATGACAGACTTA+AGG | + | chr7_1:70312486-70312505 | Msa1034720:three_prime_UTR | 35.0% |
| TTCATTGGTGCAGAAATTAC+TGG | + | chr7_1:70312577-70312596 | Msa1034720:intron | 35.0% | |
| TCATTGGTGCAGAAATTACT+GGG | + | chr7_1:70312578-70312597 | Msa1034720:intron | 35.0% | |
| ! | GTTGGTAGATTAATCTCTCT+AGG | - | chr7_1:70312738-70312757 | None:intergenic | 35.0% |
| TTAGACACTGAATGATCTGT+TGG | - | chr7_1:70312756-70312775 | None:intergenic | 35.0% | |
| ! | AGTTCTTTTGGATCACCTTT+TGG | + | chr7_1:70312973-70312992 | Msa1034720:intron | 35.0% |
| !!! | GGACTTGATTTTCAAGTCAT+AGG | + | chr7_1:70313151-70313170 | Msa1034720:three_prime_UTR | 35.0% |
| AACTTTAGCCACAACTAACT+TGG | + | chr7_1:70313205-70313224 | Msa1034720:three_prime_UTR | 35.0% | |
| !! | GAAATTGACTTGAGTAGTGT+TGG | + | chr7_1:70313343-70313362 | Msa1034720:three_prime_UTR | 35.0% |
| ACACATTATTATTCCCTGCA+TGG | + | chr7_1:70313371-70313390 | Msa1034720:three_prime_UTR | 35.0% | |
| CACATTATTATTCCCTGCAT+GGG | + | chr7_1:70313372-70313391 | Msa1034720:three_prime_UTR | 35.0% | |
| AAGGTGTACATACTCATCTT+AGG | - | chr7_1:70313474-70313493 | None:intergenic | 35.0% | |
| TGCAAAACAACTACTGTCGT+TGG | + | chr7_1:70310881-70310900 | Msa1034720:CDS | 40.0% | |
| TACTGTCGTTGGCGAAAAAA+CGG | + | chr7_1:70310892-70310911 | Msa1034720:CDS | 40.0% | |
| ACATACTGTCAAACAAACGG+AGG | - | chr7_1:70311018-70311037 | None:intergenic | 40.0% | |
| GTTTGACAGTATGTCACTGT+TGG | + | chr7_1:70311024-70311043 | Msa1034720:intron | 40.0% | |
| !!! | GCCTCATAGCTGTTTTTGTA+AGG | + | chr7_1:70311126-70311145 | Msa1034720:intron | 40.0% |
| GCCTTACAAAAACAGCTATG+AGG | - | chr7_1:70311130-70311149 | None:intergenic | 40.0% | |
| ! | CGGATCCTAGTTCTTAAGAA+AGG | + | chr7_1:70311252-70311271 | Msa1034720:exon | 40.0% |
| CCATATCTGGTCATCTGATT+TGG | - | chr7_1:70311280-70311299 | None:intergenic | 40.0% | |
| CCAAATCAGATGACCAGATA+TGG | + | chr7_1:70311277-70311296 | Msa1034720:three_prime_UTR | 40.0% | |
| ! | TGACCAGATATGGTTTCTAG+AGG | + | chr7_1:70311287-70311306 | Msa1034720:three_prime_UTR | 40.0% |
| ! | TCACCTCTAGAAACCATATC+TGG | - | chr7_1:70311293-70311312 | None:intergenic | 40.0% |
| AGGTGGACACTGAATATGTT+AGG | + | chr7_1:70311419-70311438 | Msa1034720:intron | 40.0% | |
| TAGGCAGCAGAGGAAAAAAT+TGG | + | chr7_1:70311438-70311457 | Msa1034720:three_prime_UTR | 40.0% | |
| AGGCAGCAGAGGAAAAAATT+GGG | + | chr7_1:70311439-70311458 | Msa1034720:three_prime_UTR | 40.0% | |
| AAGGAATTCCCTTCGATGTT+TGG | + | chr7_1:70311571-70311590 | Msa1034720:three_prime_UTR | 40.0% | |
| CCGAGAAATATGGAGAAAGA+TGG | + | chr7_1:70311622-70311641 | Msa1034720:three_prime_UTR | 40.0% | |
| TGGTCCCATACAAATTACCA+TGG | - | chr7_1:70311726-70311745 | None:intergenic | 40.0% | |
| ACATTAAATCGTGGGTACAC+TGG | + | chr7_1:70311851-70311870 | Msa1034720:intron | 40.0% | |
| GCAAGACTTCGAGAAATCTA+TGG | - | chr7_1:70311900-70311919 | None:intergenic | 40.0% | |
| CCTTACATTCTCGAAGTCAT+AGG | - | chr7_1:70312009-70312028 | None:intergenic | 40.0% | |
| CCTATGACTTCGAGAATGTA+AGG | + | chr7_1:70312006-70312025 | Msa1034720:intron | 40.0% | |
| ! | GTGGATTATAGCGTTGTTAG+AGG | + | chr7_1:70312064-70312083 | Msa1034720:intron | 40.0% |
| AACCTCTCATTACGTTGTTG+TGG | + | chr7_1:70312095-70312114 | Msa1034720:intron | 40.0% | |
| AACCACAACAACGTAATGAG+AGG | - | chr7_1:70312100-70312119 | None:intergenic | 40.0% | |
| CAATATCAAGAATGCACCTC+TGG | - | chr7_1:70312169-70312188 | None:intergenic | 40.0% | |
| TTCAAGGAGCAAGATCTGTT+AGG | + | chr7_1:70312192-70312211 | Msa1034720:three_prime_UTR | 40.0% | |
| TCAAGGAGCAAGATCTGTTA+GGG | + | chr7_1:70312193-70312212 | Msa1034720:three_prime_UTR | 40.0% | |
| TTCTCAAGCTCTTCCATTGA+TGG | - | chr7_1:70312257-70312276 | None:intergenic | 40.0% | |
| GTCTGTCATAACACTCTTCA+AGG | - | chr7_1:70312483-70312502 | None:intergenic | 40.0% | |
| ! | GAGGAAGTTTTTGCTTTAGC+AGG | - | chr7_1:70312519-70312538 | None:intergenic | 40.0% |
| CAGAAATTACTGGGACTTGA+TGG | + | chr7_1:70312587-70312606 | Msa1034720:intron | 40.0% | |
| CATGTCAGTATTCACCTTCA+TGG | - | chr7_1:70312691-70312710 | None:intergenic | 40.0% | |
| ATCATAAGCTGCATCTCTTC+TGG | + | chr7_1:70312792-70312811 | Msa1034720:three_prime_UTR | 40.0% | |
| !!! | TGTTTTAGCACTCAAGGGTA+AGG | + | chr7_1:70313050-70313069 | Msa1034720:intron | 40.0% |
| !! | GATCTTGCATTTGACTTGAC+AGG | + | chr7_1:70313077-70313096 | Msa1034720:intron | 40.0% |
| ! | TTGACTTGACAGGATCATGT+TGG | + | chr7_1:70313087-70313106 | Msa1034720:intron | 40.0% |
| TTGGATGTTTCCTCACTGAA+AGG | + | chr7_1:70313106-70313125 | Msa1034720:three_prime_UTR | 40.0% | |
| TGGATGTTTCCTCACTGAAA+GGG | + | chr7_1:70313107-70313126 | Msa1034720:three_prime_UTR | 40.0% | |
| ATTATCTCATTGCCCATGCA+GGG | - | chr7_1:70313387-70313406 | None:intergenic | 40.0% | |
| AATTATCTCATTGCCCATGC+AGG | - | chr7_1:70313388-70313407 | None:intergenic | 40.0% | |
| !! | GTTCCTTGTTGATGACCTTC+AGG | + | chr7_1:70310820-70310839 | Msa1034720:CDS | 45.0% |
| CATCCTGAAGGTCATCAACA+AGG | - | chr7_1:70310826-70310845 | None:intergenic | 45.0% | |
| !! | CTTGTTGATGACCTTCAGGA+TGG | + | chr7_1:70310824-70310843 | Msa1034720:CDS | 45.0% |
| CATTAAGAGGTCCATCCTGA+AGG | - | chr7_1:70310838-70310857 | None:intergenic | 45.0% | |
| CTTCAGGATGGACCTCTTAA+TGG | + | chr7_1:70310836-70310855 | Msa1034720:CDS | 45.0% | |
| ! | TTGACCGTAGTCTTGGAGAA+TGG | + | chr7_1:70311085-70311104 | Msa1034720:intron | 45.0% |
| CTGACCATTCTCCAAGACTA+CGG | - | chr7_1:70311092-70311111 | None:intergenic | 45.0% | |
| ACCAAACCCTTGTCATGCAA+TGG | + | chr7_1:70311204-70311223 | Msa1034720:CDS | 45.0% | |
| TCCATTGCATGACAAGGGTT+TGG | - | chr7_1:70311208-70311227 | None:intergenic | 45.0% | |
| GAGTGTCCATTGCATGACAA+GGG | - | chr7_1:70311213-70311232 | None:intergenic | 45.0% | |
| TGAGTGTCCATTGCATGACA+AGG | - | chr7_1:70311214-70311233 | None:intergenic | 45.0% | |
| ! | GATCCGGTTTTCGAAAAGCA+CGG | - | chr7_1:70311238-70311257 | None:intergenic | 45.0% |
| CTGAATATGTTAGGCAGCAG+AGG | + | chr7_1:70311428-70311447 | Msa1034720:three_prime_UTR | 45.0% | |
| GGCAGCAGAGGAAAAAATTG+GGG | + | chr7_1:70311440-70311459 | Msa1034720:three_prime_UTR | 45.0% | |
| GAGGAAAAAATTGGGGACTG+AGG | + | chr7_1:70311447-70311466 | Msa1034720:three_prime_UTR | 45.0% | |
| ! | TGAGGTTGTTGCTTGGAGTA+AGG | + | chr7_1:70311465-70311484 | Msa1034720:three_prime_UTR | 45.0% |
| ! | GAGGTTGTTGCTTGGAGTAA+GGG | + | chr7_1:70311466-70311485 | Msa1034720:three_prime_UTR | 45.0% |
| !! | ATTAGTGGTCCTTCTGGAGT+TGG | + | chr7_1:70311520-70311539 | Msa1034720:three_prime_UTR | 45.0% |
| GTTCCTTTACCAACTCCAGA+AGG | - | chr7_1:70311532-70311551 | None:intergenic | 45.0% | |
| TCTCCATATTTCTCGGAGCA+CGG | - | chr7_1:70311618-70311637 | None:intergenic | 45.0% | |
| ! | CTCGAATTTGCTTCTGTCCA+TGG | + | chr7_1:70311706-70311725 | Msa1034720:three_prime_UTR | 45.0% |
| TTTGTATGGGACCAGTGTTG+AGG | + | chr7_1:70311732-70311751 | Msa1034720:three_prime_UTR | 45.0% | |
| GAGCCATTATTGCTGAACTG+TGG | + | chr7_1:70312045-70312064 | Msa1034720:intron | 45.0% | |
| CTTTGTCTGTCCACCATCAA+TGG | + | chr7_1:70312241-70312260 | Msa1034720:three_prime_UTR | 45.0% | |
| TCAAGCTCTTCCATTGATGG+TGG | - | chr7_1:70312254-70312273 | None:intergenic | 45.0% | |
| GTTGCAACTGCACCCAAATT+AGG | + | chr7_1:70312614-70312633 | Msa1034720:three_prime_UTR | 45.0% | |
| ! | TTAATCTCTCTAGGTGCTGC+TGG | - | chr7_1:70312729-70312748 | None:intergenic | 45.0% |
| CATCTCTTCTGGACTTGACA+AGG | + | chr7_1:70312803-70312822 | Msa1034720:three_prime_UTR | 45.0% | |
| GGATGTTTCCTCACTGAAAG+GGG | + | chr7_1:70313108-70313127 | Msa1034720:three_prime_UTR | 45.0% | |
| GATGTTTCCTCACTGAAAGG+GGG | + | chr7_1:70313109-70313128 | Msa1034720:three_prime_UTR | 45.0% | |
| GAGTATGTACACCTTGTGTC+TGG | + | chr7_1:70313479-70313498 | Msa1034720:three_prime_UTR | 45.0% | |
| ACCTTGTGTCTGGCTAGATA+TGG | + | chr7_1:70313489-70313508 | Msa1034720:three_prime_UTR | 45.0% | |
| ACCATATCTAGCCAGACACA+AGG | - | chr7_1:70313493-70313512 | None:intergenic | 45.0% | |
| TTGTGTCTGGCTAGATATGG+TGG | + | chr7_1:70313492-70313511 | Msa1034720:three_prime_UTR | 45.0% | |
| !! | TATTTAAAAATTAAAATATC+AGG | - | chr7_1:70312144-70312163 | None:intergenic | 5.0% |
| AGGTCATCAACAAGGAACGC+TGG | - | chr7_1:70310818-70310837 | None:intergenic | 50.0% | |
| !!! | GGAGGCCCGGTTTTTGTTTT+AGG | - | chr7_1:70311000-70311019 | None:intergenic | 50.0% |
| GTCACTGTTGGAGCTGATGA+TGG | + | chr7_1:70311036-70311055 | Msa1034720:intron | 50.0% | |
| !! | GTTTGGTGCCTAGCACAGTT+GGG | - | chr7_1:70311191-70311210 | None:intergenic | 50.0% |
| ! | CAGCCGTGCTTTTCGAAAAC+CGG | + | chr7_1:70311232-70311251 | Msa1034720:CDS | 50.0% |
| ! | GCTTGGAGTAAGGGTGTGAT+AGG | + | chr7_1:70311475-70311494 | Msa1034720:three_prime_UTR | 50.0% |
| !! | GGTCCTTCTGGAGTTGGTAA+AGG | + | chr7_1:70311526-70311545 | Msa1034720:three_prime_UTR | 50.0% |
| AACCCGTGCTCCGAGAAATA+TGG | + | chr7_1:70311612-70311631 | Msa1034720:three_prime_UTR | 50.0% | |
| CTCCATATTTCTCGGAGCAC+GGG | - | chr7_1:70311617-70311636 | None:intergenic | 50.0% | |
| CACTTCAACAGCCTCAACAC+TGG | - | chr7_1:70311746-70311765 | None:intergenic | 50.0% | |
| ! | CAGTGTTGAGGCTGTTGAAG+TGG | + | chr7_1:70311744-70311763 | Msa1034720:three_prime_UTR | 50.0% |
| GTTGAAGTGGTAGCTGATGC+AGG | + | chr7_1:70311757-70311776 | Msa1034720:three_prime_UTR | 50.0% | |
| AAACAGAGGGACTGAGACTG+AGG | + | chr7_1:70312366-70312385 | Msa1034720:intron | 50.0% | |
| ! | GAGCATTACGCAGTCGCTTT+AGG | - | chr7_1:70312399-70312418 | None:intergenic | 50.0% |
| AAAGCGACTGCGTAATGCTC+AGG | + | chr7_1:70312399-70312418 | Msa1034720:three_prime_UTR | 50.0% | |
| TCAAGTCCTCTTGTCCTTCC+AGG | - | chr7_1:70313139-70313158 | None:intergenic | 50.0% | |
| CGAAAATGCGACGCTCGAAA+AGG | + | chr7_1:70313254-70313273 | Msa1034720:three_prime_UTR | 50.0% | |
| CTGTCAAACAAACGGAGGCC+CGG | - | chr7_1:70311013-70311032 | None:intergenic | 55.0% | |
| AGGGTTCACCCAACTGTGCT+AGG | + | chr7_1:70311180-70311199 | Msa1034720:intron | 55.0% | |
| !! | GGTTTGGTGCCTAGCACAGT+TGG | - | chr7_1:70311192-70311211 | None:intergenic | 55.0% |
| TGGGGACTGAGGTTGTTGCT+TGG | + | chr7_1:70311458-70311477 | Msa1034720:three_prime_UTR | 55.0% | |
| ATCGTGGGTACACTGGTGTG+TGG | + | chr7_1:70311858-70311877 | Msa1034720:intron | 55.0% | |
| !! | TTGAGAAGCGCCTTCGTGAC+AGG | + | chr7_1:70312270-70312289 | Msa1034720:three_prime_UTR | 55.0% |
| CCACTACTCACCTGTCACGA+AGG | - | chr7_1:70312283-70312302 | None:intergenic | 55.0% | |
| CCTTCGTGACAGGTGAGTAG+TGG | + | chr7_1:70312280-70312299 | Msa1034720:intron | 55.0% | |
| GCTCAGGCTGAGATTGAGCA+AGG | + | chr7_1:70312415-70312434 | Msa1034720:three_prime_UTR | 55.0% | |
| AGGTGCACCCCCTTTCAGTG+AGG | - | chr7_1:70313119-70313138 | None:intergenic | 60.0% | |
| ! | TCACTGAAAGGGGGTGCACC+TGG | + | chr7_1:70313118-70313137 | Msa1034720:three_prime_UTR | 60.0% |
| ! | TGAAAGGGGGTGCACCTGGA+AGG | + | chr7_1:70313122-70313141 | Msa1034720:three_prime_UTR | 60.0% |
| GGTGCACCTGGAAGGACAAG+AGG | + | chr7_1:70313130-70313149 | Msa1034720:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 70310497 | 70313602 | 70310497 | ID=Msa1034720;Name=Msa1034720 |
| chr7_1 | mRNA | 70310497 | 70313602 | 70310497 | ID=Msa1034720-mRNA-1;Parent=Msa1034720;Name=Msa1034720-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.75|0.88|0.88|1|1|9|1320|66 |
| chr7_1 | exon | 70310497 | 70310502 | 70310497 | ID=Msa1034720-mRNA-1:exon:16796;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70310806 | 70310913 | 70310806 | ID=Msa1034720-mRNA-1:exon:16797;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70311182 | 70311308 | 70311182 | ID=Msa1034720-mRNA-1:exon:16798;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70311421 | 70311783 | 70311421 | ID=Msa1034720-mRNA-1:exon:16799;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70312170 | 70312291 | 70312170 | ID=Msa1034720-mRNA-1:exon:16800;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70312372 | 70312507 | 70312372 | ID=Msa1034720-mRNA-1:exon:16801;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70312590 | 70312635 | 70312590 | ID=Msa1034720-mRNA-1:exon:16802;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70312730 | 70312838 | 70312730 | ID=Msa1034720-mRNA-1:exon:16803;Parent=Msa1034720-mRNA-1 |
| chr7_1 | exon | 70313099 | 70313602 | 70313099 | ID=Msa1034720-mRNA-1:exon:16804;Parent=Msa1034720-mRNA-1 |
| chr7_1 | CDS | 70310497 | 70310502 | 70310497 | ID=Msa1034720-mRNA-1:cds;Parent=Msa1034720-mRNA-1 |
| chr7_1 | CDS | 70310806 | 70310913 | 70310806 | ID=Msa1034720-mRNA-1:cds;Parent=Msa1034720-mRNA-1 |
| chr7_1 | CDS | 70311182 | 70311268 | 70311182 | ID=Msa1034720-mRNA-1:cds;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70311269 | 70311308 | 70311269 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70311421 | 70311783 | 70311421 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70312170 | 70312291 | 70312170 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70312372 | 70312507 | 70312372 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70312590 | 70312635 | 70312590 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70312730 | 70312838 | 70312730 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| chr7_1 | three_prime_UTR | 70313099 | 70313602 | 70313099 | ID=Msa1034720-mRNA-1:three_prime_utr;Parent=Msa1034720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
