Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115050 | XP_024627007.1 | 93.401 | 394 | 3 | 1 | 1 | 371 | 1 | 394 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115050 | sp|Q9M682|GMK2_ARATH | 64.962 | 391 | 109 | 6 | 1 | 366 | 1 | 388 | 7.93e-172 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115050 | A2Q3K9 | 93.401 | 394 | 3 | 1 | 1 | 371 | 1 | 394 | 0.0 | 745 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1034720 | Msa1115050 | 0.811699 | 6.144878e-51 | -8.615850e-47 |
| Msa1074520 | Msa1115050 | 0.917064 | 8.368710e-86 | -8.615850e-47 |
| Msa1115050 | Msa1162080 | 0.888792 | 4.309290e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115050 | MtrunA17_Chr7g0257781 | 93.147 | 394 | 3 | 2 | 1 | 371 | 1 | 393 | 0.0 | 741 |
| Msa1115050 | MtrunA17_Chr2g0287261 | 36.747 | 166 | 100 | 3 | 136 | 300 | 91 | 252 | 2.02e-24 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115050 | AT3G57550.2 | 64.872 | 390 | 112 | 5 | 1 | 366 | 1 | 389 | 1.22e-173 | 489 |
| Msa1115050 | AT3G57550.1 | 64.962 | 391 | 109 | 6 | 1 | 366 | 1 | 388 | 8.06e-173 | 487 |
| Msa1115050 | AT3G57550.3 | 64.962 | 391 | 109 | 6 | 1 | 366 | 1 | 388 | 8.06e-173 | 487 |
| Msa1115050 | AT2G41880.1 | 64.660 | 382 | 110 | 5 | 1 | 359 | 1 | 380 | 1.98e-166 | 471 |
| Msa1115050 | AT2G41880.7 | 64.660 | 382 | 110 | 5 | 1 | 359 | 1 | 380 | 1.98e-166 | 471 |
| Msa1115050 | AT2G41880.5 | 60.097 | 411 | 110 | 6 | 1 | 359 | 1 | 409 | 1.61e-159 | 454 |
| Msa1115050 | AT2G41880.6 | 67.733 | 344 | 105 | 4 | 1 | 340 | 1 | 342 | 4.24e-159 | 451 |
| Msa1115050 | AT2G41880.8 | 67.733 | 344 | 105 | 4 | 1 | 340 | 1 | 342 | 4.24e-159 | 451 |
| Msa1115050 | AT2G41880.4 | 70.588 | 323 | 91 | 3 | 1 | 319 | 1 | 323 | 1.08e-158 | 449 |
| Msa1115050 | AT2G41880.9 | 70.476 | 315 | 89 | 3 | 1 | 311 | 1 | 315 | 4.11e-154 | 436 |
| Msa1115050 | AT2G41880.2 | 70.476 | 315 | 89 | 3 | 1 | 311 | 1 | 315 | 4.27e-154 | 437 |
| Msa1115050 | AT2G41880.3 | 70.476 | 315 | 89 | 3 | 1 | 311 | 1 | 315 | 4.27e-154 | 437 |
| Msa1115050 | AT3G06200.1 | 32.418 | 182 | 116 | 4 | 136 | 314 | 91 | 268 | 1.61e-20 | 90.9 |
Find 110 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCGTTCTTTGATTATTTA+TGG | 0.084174 | 7_3:-62145877 | Msa1115050:three_prime_UTR |
| GTTGCAACTGCACCCAAATT+AGG | 0.227947 | 7_3:-62146578 | Msa1115050:intron |
| CTTCAGGATGGACCTCTTAA+TGG | 0.276233 | 7_3:-62148361 | Msa1115050:CDS |
| ATTGTTATTAGTGGTCCTTC+TGG | 0.288971 | 7_3:-62147683 | Msa1115050:CDS |
| GAGCATTACGCAATCGCTTT+AGG | 0.289606 | 7_3:+62146796 | None:intergenic |
| CGTTCTTGCTTCGTTTCTTA+AGG | 0.293076 | 7_3:-62149134 | Msa1115050:intron |
| TTCTCAAGCTCTTCCATTGA+TGG | 0.297823 | 7_3:+62146940 | None:intergenic |
| TCCTGCCTGCCTGCCCTTGA+AGG | 0.298416 | 7_3:-62149346 | Msa1115050:five_prime_UTR |
| CCATATCTGGTCATCTGATT+TGG | 0.313449 | 7_3:+62147920 | None:intergenic |
| CCATCTTTCTCCATATTTCT+CGG | 0.318499 | 7_3:+62147575 | None:intergenic |
| TCACACTCTTCTCAGTAAAA+TGG | 0.321682 | 7_3:+62147543 | None:intergenic |
| TGTTCTTTAGAACCTTAAAA+AGG | 0.330006 | 7_3:+62149165 | None:intergenic |
| CCAAATCAGATGACCAGATA+TGG | 0.340254 | 7_3:-62147920 | Msa1115050:CDS |
| AAGGAATTCCCTTCGATGTT+TGG | 0.340728 | 7_3:-62147626 | Msa1115050:CDS |
| TCAAGTCCTCTTGTCCTTCC+AGG | 0.345102 | 7_3:+62146056 | None:intergenic |
| AACCCGTGCTCCGAGAAATA+TGG | 0.350022 | 7_3:-62147585 | Msa1115050:CDS |
| CAGAAATTACTGGGACTTGA+TGG | 0.358399 | 7_3:-62146605 | Msa1115050:CDS |
| GTTCCTTGTTGATGACCTTC+AGG | 0.367183 | 7_3:-62148377 | Msa1115050:CDS |
| TTCATTGGTGCAGAAATTAC+TGG | 0.369583 | 7_3:-62146615 | Msa1115050:intron |
| TCTGTCCATGGTAATTTGTA+TGG | 0.376553 | 7_3:-62147479 | Msa1115050:CDS |
| TACAACTACATACTCATCTT+AGG | 0.389460 | 7_3:+62145721 | None:intergenic |
| TATAGACACATATTTCTCTA+TGG | 0.400621 | 7_3:-62148580 | Msa1115050:intron |
| CTCGAATTTGCTTCTGTCCA+TGG | 0.403156 | 7_3:-62147491 | Msa1115050:CDS |
| GAGAAACCTATTGTTATTAG+TGG | 0.405407 | 7_3:-62147692 | Msa1115050:CDS |
| ATTCTTGATATTGATGTTCA+AGG | 0.419974 | 7_3:-62147018 | Msa1115050:CDS |
| TTCAAGGAGCAAGATCTGTT+AGG | 0.421033 | 7_3:-62147002 | Msa1115050:CDS |
| GTCTGTCATAACACTCTTCA+AGG | 0.422735 | 7_3:+62146712 | None:intergenic |
| TGAGGTTGTTGCTTGGAGTA+AGG | 0.423659 | 7_3:-62147732 | Msa1115050:CDS |
| CCCACAAAGAAAACAGAAAC+AGG | 0.424265 | 7_3:-62149369 | Msa1115050:five_prime_UTR |
| TGGACAGACAAAGATGAATA+TGG | 0.427437 | 7_3:+62146963 | None:intergenic |
| TGGAACCTTTCTTAAGAACT+AGG | 0.427990 | 7_3:+62147940 | None:intergenic |
| CTTTGTCTGTCCACCATCAA+TGG | 0.430337 | 7_3:-62146953 | Msa1115050:CDS |
| GAAGGACCACTAATAACAAT+AGG | 0.431055 | 7_3:+62147686 | None:intergenic |
| ATTAGTGGTCCTTCTGGAGT+TGG | 0.435618 | 7_3:-62147677 | Msa1115050:CDS |
| AGGAAGAAATTCATATTTGT+AGG | 0.438406 | 7_3:+62149283 | None:intergenic |
| AACTTTAGCCACAACTAACT+TGG | 0.441501 | 7_3:-62145987 | Msa1115050:three_prime_UTR |
| ACCTTCAAGGGCAGGCAGGC+AGG | 0.443489 | 7_3:+62149345 | None:intergenic |
| GTAGTTGTACACCTTGTGTC+TGG | 0.445246 | 7_3:-62145707 | Msa1115050:three_prime_UTR |
| CTCCATATTTCTCGGAGCAC+GGG | 0.445632 | 7_3:+62147583 | None:intergenic |
| CGGATCCTAGTTCTTAAGAA+AGG | 0.451808 | 7_3:-62147945 | Msa1115050:CDS |
| TCTCCATATTTCTCGGAGCA+CGG | 0.454075 | 7_3:+62147582 | None:intergenic |
| AATTATCTCATTGCCCATGC+AGG | 0.455168 | 7_3:+62145807 | None:intergenic |
| GGTTTGGTGCCTAGCACAGT+TGG | 0.455219 | 7_3:+62148008 | None:intergenic |
| TGGATGTTTCCTCACTGAAA+GGG | 0.456264 | 7_3:-62146085 | Msa1115050:CDS |
| TTCAATTCAAGACCATTAAG+AGG | 0.459949 | 7_3:+62148349 | None:intergenic |
| ACCTTGTGTCTGGCTAGATA+TGG | 0.466509 | 7_3:-62145697 | Msa1115050:three_prime_UTR |
| CTTTCTTAAGAACTAGGATC+CGG | 0.474576 | 7_3:+62147946 | None:intergenic |
| TTGAGAAGCGCCTTCGTGAC+AGG | 0.480044 | 7_3:-62146924 | Msa1115050:intron |
| TCCATTGCATGACAAGGGTT+TGG | 0.480420 | 7_3:+62147992 | None:intergenic |
| TCTTCTCAGTAAAATGGTAA+TGG | 0.482341 | 7_3:+62147549 | None:intergenic |
| TTGACCGTAGTCTTGGAGAA+TGG | 0.486043 | 7_3:-62148112 | Msa1115050:intron |
| CTGTCCATGGTAATTTGTAT+GGG | 0.487223 | 7_3:-62147478 | Msa1115050:CDS |
| CTTGTTGATGACCTTCAGGA+TGG | 0.487351 | 7_3:-62148373 | Msa1115050:CDS |
| TCACCTCTAGAAACCATATC+TGG | 0.487464 | 7_3:+62147907 | None:intergenic |
| CGAGAAATATGGAGAAAGAT+GGG | 0.489516 | 7_3:-62147574 | Msa1115050:CDS |
| CCGAGAAATATGGAGAAAGA+TGG | 0.490569 | 7_3:-62147575 | Msa1115050:CDS |
| AAAGCGATTGCGTAATGCTC+AGG | 0.492230 | 7_3:-62146793 | Msa1115050:CDS |
| GTTTGACAGTATGTCACTGT+TGG | 0.492792 | 7_3:-62148173 | Msa1115050:intron |
| ATGGAGAAAGAGATCAAAAG+TGG | 0.501117 | 7_3:-62147521 | Msa1115050:CDS |
| GAGGTTGTTGCTTGGAGTAA+GGG | 0.507302 | 7_3:-62147731 | Msa1115050:CDS |
| CGAAAATGCGACGCTCGAAA+AGG | 0.510164 | 7_3:-62145938 | Msa1115050:three_prime_UTR |
| GGTCCTTCTGGAGTTGGTAA+AGG | 0.512799 | 7_3:-62147671 | Msa1115050:CDS |
| GTTTGGTGCCTAGCACAGTT+GGG | 0.517021 | 7_3:+62148009 | None:intergenic |
| ACTAATATCAATGCTCATGA+AGG | 0.517312 | 7_3:-62147645 | Msa1115050:CDS |
| GCTTGGAGTAAGGGTGTGAT+AGG | 0.517396 | 7_3:-62147722 | Msa1115050:CDS |
| CACATTATTATTCCCTGCAT+GGG | 0.519441 | 7_3:-62145820 | Msa1115050:three_prime_UTR |
| TCAAGGAGCAAGATCTGTTA+GGG | 0.522205 | 7_3:-62147001 | Msa1115050:CDS |
| GTCACTGTTGGAGCTGATGA+TGG | 0.527989 | 7_3:-62148161 | Msa1115050:CDS |
| TTGGATGTTTCCTCACTGAA+AGG | 0.528344 | 7_3:-62146086 | Msa1115050:CDS |
| GAAATTGACTTGAGTAGTGT+TGG | 0.530166 | 7_3:-62145849 | Msa1115050:three_prime_UTR |
| AGAGTGTTATGACAGACTTA+AGG | 0.531515 | 7_3:-62146706 | Msa1115050:intron |
| GTTGAAGTGGTAGCTGATGC+AGG | 0.538538 | 7_3:-62147440 | Msa1115050:CDS |
| CTGAATATGTTAGGCAGCAG+AGG | 0.539132 | 7_3:-62147769 | Msa1115050:CDS |
| AGGTGGACACTGAATATGTT+AGG | 0.540338 | 7_3:-62147778 | Msa1115050:CDS |
| TTAGACACTGAATGATCAGT+TGG | 0.541006 | 7_3:+62146439 | None:intergenic |
| TGGGGACTGAGGTTGTTGCT+TGG | 0.545642 | 7_3:-62147739 | Msa1115050:CDS |
| ACACATTATTATTCCCTGCA+TGG | 0.549652 | 7_3:-62145821 | Msa1115050:three_prime_UTR |
| GTTGGTAGATTAATCTCTCT+AGG | 0.549971 | 7_3:+62146457 | None:intergenic |
| TGCAAAACAACTACTGTCGT+TGG | 0.554632 | 7_3:-62148316 | Msa1115050:CDS |
| ACAAACCTTCAAGGGCAGGC+AGG | 0.555462 | 7_3:+62149341 | None:intergenic |
| TTGACTTGACAGGATCATGT+TGG | 0.561118 | 7_3:-62146105 | Msa1115050:intron |
| TCAAGCTCTTCCATTGATGG+TGG | 0.563601 | 7_3:+62146943 | None:intergenic |
| GGATGTTTCCTCACTGAAAG+GGG | 0.566805 | 7_3:-62146084 | Msa1115050:CDS |
| AGGGTTCACCCAACTGTGCT+AGG | 0.568022 | 7_3:-62148017 | Msa1115050:CDS |
| GGTGCACCTGGAAGGACAAG+AGG | 0.574956 | 7_3:-62146062 | Msa1115050:CDS |
| ATTATCTCATTGCCCATGCA+GGG | 0.577194 | 7_3:+62145808 | None:intergenic |
| AATGGTCTTGAATTGAACAA+TGG | 0.577419 | 7_3:-62148343 | Msa1115050:CDS |
| TCATTGGTGCAGAAATTACT+GGG | 0.585295 | 7_3:-62146614 | Msa1115050:intron |
| CATAAATAATCAAAGAACGC+TGG | 0.594521 | 7_3:+62145878 | None:intergenic |
| TTGTGTCTGGCTAGATATGG+TGG | 0.598625 | 7_3:-62145694 | Msa1115050:three_prime_UTR |
| ACCAAACCCTTGTCATGCAA+TGG | 0.601097 | 7_3:-62147993 | Msa1115050:CDS |
| AAACAGAGGGACTGAGACTG+AGG | 0.601275 | 7_3:-62146826 | Msa1115050:intron |
| CAGTGTTGAGGCTGTTGAAG+TGG | 0.604055 | 7_3:-62147453 | Msa1115050:CDS |
| CATTAAGAGGTCCATCCTGA+AGG | 0.605764 | 7_3:+62148362 | None:intergenic |
| TGAGTGTCCATTGCATGACA+AGG | 0.606716 | 7_3:+62147986 | None:intergenic |
| CTGACCATTCTCCAAGACTA+CGG | 0.617954 | 7_3:+62148108 | None:intergenic |
| GATGTTTCCTCACTGAAAGG+GGG | 0.625893 | 7_3:-62146083 | Msa1115050:CDS |
| CATCCTGAAGGTCATCAACA+AGG | 0.626232 | 7_3:+62148374 | None:intergenic |
| CACTTCAACAGCCTCAACAC+TGG | 0.628025 | 7_3:+62147454 | None:intergenic |
| GCTCAGGCTGAGATTGAGCA+AGG | 0.631772 | 7_3:-62146777 | Msa1115050:CDS |
| GAGGGTTTGAAGAAAATGTG+AGG | 0.636340 | 7_3:+62149263 | None:intergenic |
| GTTCCTTTACCAACTCCAGA+AGG | 0.638608 | 7_3:+62147668 | None:intergenic |
| TGACCAGATATGGTTTCTAG+AGG | 0.640137 | 7_3:-62147910 | Msa1115050:intron |
| GAGTGTCCATTGCATGACAA+GGG | 0.640152 | 7_3:+62147987 | None:intergenic |
| CCACTACTCACCTGTCACGA+AGG | 0.647896 | 7_3:+62146914 | None:intergenic |
| TGGTCCCATACAAATTACCA+TGG | 0.653492 | 7_3:+62147474 | None:intergenic |
| AGGTCATCAACAAGGAACGC+TGG | 0.660018 | 7_3:+62148382 | None:intergenic |
| ACCATATCTAGCCAGACACA+AGG | 0.663931 | 7_3:+62145696 | None:intergenic |
| GAGAAATATGGAGAAAGATG+GGG | 0.669595 | 7_3:-62147573 | Msa1115050:CDS |
| TTTGTATGGGACCAGTGTTG+AGG | 0.692634 | 7_3:-62147465 | Msa1115050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATGAATTTTTTTAAATG+GGG | + | chr7_3:62145978-62145997 | None:intergenic | 10.0% |
| !! | ATTGAAAATTCAATAAACAA+AGG | + | chr7_3:62146016-62146035 | None:intergenic | 15.0% |
| !! | ATAATATATGTGAATTATGA+TGG | - | chr7_3:62146102-62146121 | Msa1115050:intron | 15.0% |
| !! | AATACCATAACAATTATTAA+GGG | + | chr7_3:62146355-62146374 | None:intergenic | 15.0% |
| !!! | GGTATTCATATATTTTTTTA+TGG | - | chr7_3:62146369-62146388 | Msa1115050:intron | 15.0% |
| !!! | TAAATGCTAATTTGTTTTAT+TGG | - | chr7_3:62147194-62147213 | Msa1115050:intron | 15.0% |
| !!! | TTAATTTTTAAATATTCCAG+AGG | - | chr7_3:62147955-62147974 | Msa1115050:CDS | 15.0% |
| !!! | ATTAAGTTAAGACTAAATTT+TGG | + | chr7_3:62148146-62148165 | None:intergenic | 15.0% |
| !! | TTGTTAATTTATGAATCAAA+TGG | + | chr7_3:62148717-62148736 | None:intergenic | 15.0% |
| !! | AAACAAGTAAAGAAAATTAT+AGG | + | chr7_3:62148842-62148861 | None:intergenic | 15.0% |
| !! | ATAAAGCAAAAAGATGAAAA+AGG | + | chr7_3:62145766-62145785 | None:intergenic | 20.0% |
| !!! | AAAACAAAATCACCTTTTTA+AGG | - | chr7_3:62145822-62145841 | Msa1115050:three_prime_UTR | 20.0% |
| !! | GAATACCATAACAATTATTA+AGG | + | chr7_3:62146356-62146375 | None:intergenic | 20.0% |
| !!! | TTTTTTATGGTTTTTTGTTC+AGG | - | chr7_3:62146382-62146401 | Msa1115050:intron | 20.0% |
| !!! | TTTTTATGGTTTTTTGTTCA+GGG | - | chr7_3:62146383-62146402 | Msa1115050:intron | 20.0% |
| !!! | TTTTTGTTTTAGGCATAAAT+TGG | + | chr7_3:62146792-62146811 | None:intergenic | 20.0% |
| !!! | TTTGTTACTGATATTCATTT+TGG | - | chr7_3:62146954-62146973 | Msa1115050:CDS | 20.0% |
| !!! | TAATTTGTTTTATTGGTACT+AGG | - | chr7_3:62147201-62147220 | Msa1115050:intron | 20.0% |
| !!! | AATTCATTTTATTTGAAGCT+TGG | - | chr7_3:62147622-62147641 | Msa1115050:CDS | 20.0% |
| !! | ATATTAGAACATTAAATCGT+GGG | - | chr7_3:62147645-62147664 | Msa1115050:CDS | 20.0% |
| !!! | AATCAATTCTAAAAACTTCA+AGG | + | chr7_3:62147774-62147793 | None:intergenic | 20.0% |
| !! | CAAAAATTCTTACCTAATTT+GGG | + | chr7_3:62148436-62148455 | None:intergenic | 20.0% |
| !! | ACAAAAATTCTTACCTAATT+TGG | + | chr7_3:62148437-62148456 | None:intergenic | 20.0% |
| !! | ATTAAGGAATTTCAATTTCA+GGG | + | chr7_3:62148754-62148773 | None:intergenic | 20.0% |
| !! | CAAAAGAACTAATATGATTA+AGG | + | chr7_3:62148770-62148789 | None:intergenic | 20.0% |
| !!! | CTTAATCATATTAGTTCTTT+TGG | - | chr7_3:62148768-62148787 | Msa1115050:intron | 20.0% |
| !! | GAAATTAACAAAATTCCAAA+AGG | + | chr7_3:62148798-62148817 | None:intergenic | 20.0% |
| !!! | TTTGGAATTTTGTTAATTTC+AGG | - | chr7_3:62148798-62148817 | Msa1115050:intron | 20.0% |
| !! | TTGATTTTACAAACCTTCAA+GGG | + | chr7_3:62145669-62145688 | None:intergenic | 25.0% |
| ! | AGGAAGAAATTCATATTTGT+AGG | + | chr7_3:62145719-62145738 | None:intergenic | 25.0% |
| ! | AAAGATGAAAAAGGAAAAGA+GGG | + | chr7_3:62145757-62145776 | None:intergenic | 25.0% |
| ! | AAAAGATGAAAAAGGAAAAG+AGG | + | chr7_3:62145758-62145777 | None:intergenic | 25.0% |
| !!! | AAAAAGGTGATTTTGTTTTG+TGG | + | chr7_3:62145821-62145840 | None:intergenic | 25.0% |
| !!! | TGTTCTTTAGAACCTTAAAA+AGG | + | chr7_3:62145837-62145856 | None:intergenic | 25.0% |
| ! | AAAAAGATGAAATCTTGAAG+AGG | + | chr7_3:62145900-62145919 | None:intergenic | 25.0% |
| !!! | TTTTCAATGTTAGTCTAGTT+TGG | - | chr7_3:62146028-62146047 | Msa1115050:CDS | 25.0% |
| ! | GATCAGAATGATTCATATAA+TGG | - | chr7_3:62146124-62146143 | Msa1115050:intron | 25.0% |
| ! | ATAAAAGAAATCATCAAGCT+TGG | + | chr7_3:62146158-62146177 | None:intergenic | 25.0% |
| ! | CATGTTGAATATTCTGTATA+TGG | - | chr7_3:62146243-62146262 | Msa1115050:intron | 25.0% |
| ! | AGATCCCTTAATAATTGTTA+TGG | - | chr7_3:62146348-62146367 | Msa1115050:intron | 25.0% |
| ! | TATAGACACATATTTCTCTA+TGG | - | chr7_3:62146419-62146438 | Msa1115050:intron | 25.0% |
| ! | GAATTTGTGATGATTAAATG+TGG | - | chr7_3:62146526-62146545 | Msa1115050:intron | 25.0% |
| ! | TCTATTTGATTGTGATCAAT+AGG | - | chr7_3:62146586-62146605 | Msa1115050:CDS | 25.0% |
| ! | CTATTTGATTGTGATCAATA+GGG | - | chr7_3:62146587-62146606 | Msa1115050:CDS | 25.0% |
| ! | TTTATGCCTAAAACAAAAAC+CGG | - | chr7_3:62146793-62146812 | Msa1115050:CDS | 25.0% |
| ! | GATATTAGAACATTAAATCG+TGG | - | chr7_3:62147644-62147663 | Msa1115050:CDS | 25.0% |
| ! | ATTCTTGATATTGATGTTCA+AGG | - | chr7_3:62147981-62148000 | Msa1115050:CDS | 25.0% |
| !!! | ACTTAATGTTTTGAAAACAG+AGG | - | chr7_3:62148159-62148178 | Msa1115050:CDS | 25.0% |
| !!! | CTTAATGTTTTGAAAACAGA+GGG | - | chr7_3:62148160-62148179 | Msa1115050:CDS | 25.0% |
| ! | CTGAAAATTTACATTCAGTT+TGG | + | chr7_3:62148466-62148485 | None:intergenic | 25.0% |
| ! | TACGATTTAAGAAACGAAAT+TGG | + | chr7_3:62148685-62148704 | None:intergenic | 25.0% |
| ! | GATTAAGGAATTTCAATTTC+AGG | + | chr7_3:62148755-62148774 | None:intergenic | 25.0% |
| !! | GTTGATTTTACAAACCTTCA+AGG | + | chr7_3:62145670-62145689 | None:intergenic | 30.0% |
| TGTAGGCTCAAAAGAAAAAA+GGG | + | chr7_3:62145702-62145721 | None:intergenic | 30.0% | |
| TTGTAGGCTCAAAAGAAAAA+AGG | + | chr7_3:62145703-62145722 | None:intergenic | 30.0% | |
| ! | TTTTTGTTCAGGGTTTAATC+AGG | - | chr7_3:62146393-62146412 | Msa1115050:intron | 30.0% |
| ! | TTTTGTTCAGGGTTTAATCA+GGG | - | chr7_3:62146394-62146413 | Msa1115050:intron | 30.0% |
| ATGAAATAGCATGGAATAGA+AGG | + | chr7_3:62146460-62146479 | None:intergenic | 30.0% | |
| TGTAACTCAATGAAATAGCA+TGG | + | chr7_3:62146469-62146488 | None:intergenic | 30.0% | |
| TGATTAAATGTGGATCAAAG+TGG | - | chr7_3:62146536-62146555 | Msa1115050:intron | 30.0% | |
| TTCAATTCAAGACCATTAAG+AGG | + | chr7_3:62146653-62146672 | None:intergenic | 30.0% | |
| ! | AATGGTCTTGAATTGAACAA+TGG | - | chr7_3:62146656-62146675 | Msa1115050:intron | 30.0% |
| TTATGCCTAAAACAAAAACC+GGG | - | chr7_3:62146794-62146813 | Msa1115050:CDS | 30.0% | |
| GTCAAAAATTTGAACGTCAA+TGG | + | chr7_3:62146872-62146891 | None:intergenic | 30.0% | |
| ! | TGATATTCATTTTGGATTGC+AGG | - | chr7_3:62146962-62146981 | Msa1115050:CDS | 30.0% |
| ! | GATATTCATTTTGGATTGCA+GGG | - | chr7_3:62146963-62146982 | Msa1115050:CDS | 30.0% |
| !!! | TTTGTTTTATTGGTACTAGG+TGG | - | chr7_3:62147204-62147223 | Msa1115050:intron | 30.0% |
| ! | GAGAAACCTATTGTTATTAG+TGG | - | chr7_3:62147307-62147326 | Msa1115050:intron | 30.0% |
| ACTAATATCAATGCTCATGA+AGG | - | chr7_3:62147354-62147373 | Msa1115050:intron | 30.0% | |
| TCTTCTCAGTAAAATGGTAA+TGG | + | chr7_3:62147453-62147472 | None:intergenic | 30.0% | |
| TGTCGAAATCTATGGTAATT+TGG | + | chr7_3:62147694-62147713 | None:intergenic | 30.0% | |
| GGTAAGAAATTGTCGTAATT+CGG | + | chr7_3:62147928-62147947 | None:intergenic | 30.0% | |
| !! | AGGATGATAAGAACTTTTTC+AGG | + | chr7_3:62148352-62148371 | None:intergenic | 30.0% |
| CCAATGAACATACGTATATT+AGG | + | chr7_3:62148372-62148391 | None:intergenic | 30.0% | |
| CCTAATATACGTATGTTCAT+TGG | - | chr7_3:62148369-62148388 | Msa1115050:CDS | 30.0% | |
| TTCAGTTTATAAAGCCATGA+AGG | - | chr7_3:62148481-62148500 | Msa1115050:intron | 30.0% | |
| GTTTCTTAAATCGTAGACAT+TGG | - | chr7_3:62148690-62148709 | Msa1115050:intron | 30.0% | |
| !!! | TTTACTTGTTTTAGCACTCA+AGG | - | chr7_3:62148851-62148870 | Msa1115050:intron | 30.0% |
| !!! | TTACTTGTTTTAGCACTCAA+GGG | - | chr7_3:62148852-62148871 | Msa1115050:intron | 30.0% |
| ATGAAAAACCAAGTTAGTTG+TGG | + | chr7_3:62149023-62149042 | None:intergenic | 30.0% | |
| CATAAATAATCAAAGAACGC+TGG | + | chr7_3:62149124-62149143 | None:intergenic | 30.0% | |
| CAGCGTTCTTTGATTATTTA+TGG | - | chr7_3:62149122-62149141 | Msa1115050:intron | 30.0% | |
| TACAACTACATACTCATCTT+AGG | + | chr7_3:62149281-62149300 | None:intergenic | 30.0% | |
| !! | TGTTTCTGTTTTCTTTGTGG+GGG | + | chr7_3:62145631-62145650 | None:intergenic | 35.0% |
| !!! | CTGTTTCTGTTTTCTTTGTG+GGG | + | chr7_3:62145632-62145651 | None:intergenic | 35.0% |
| !!! | CCTGTTTCTGTTTTCTTTGT+GGG | + | chr7_3:62145633-62145652 | None:intergenic | 35.0% |
| !!! | ACCTGTTTCTGTTTTCTTTG+TGG | + | chr7_3:62145634-62145653 | None:intergenic | 35.0% |
| TAGGCTCAAAAGAAAAAAGG+GGG | + | chr7_3:62145700-62145719 | None:intergenic | 35.0% | |
| GTAGGCTCAAAAGAAAAAAG+GGG | + | chr7_3:62145701-62145720 | None:intergenic | 35.0% | |
| ! | TCTTTTTACACATTGCGATC+TGG | - | chr7_3:62145913-62145932 | Msa1115050:three_prime_UTR | 35.0% |
| ! | CTTTTTACACATTGCGATCT+GGG | - | chr7_3:62145914-62145933 | Msa1115050:three_prime_UTR | 35.0% |
| ! | CAATGTTAGTCTAGTTTGGT+TGG | - | chr7_3:62146032-62146051 | Msa1115050:CDS | 35.0% |
| GTGACATACTGTCAAACAAA+CGG | + | chr7_3:62146823-62146842 | None:intergenic | 35.0% | |
| ! | CAAATTTTTGACCGTAGTCT+TGG | - | chr7_3:62146880-62146899 | Msa1115050:intron | 35.0% |
| CTTTCTTAAGAACTAGGATC+CGG | + | chr7_3:62147056-62147075 | None:intergenic | 35.0% | |
| TGGAACCTTTCTTAAGAACT+AGG | + | chr7_3:62147062-62147081 | None:intergenic | 35.0% | |
| GAAGGACCACTAATAACAAT+AGG | + | chr7_3:62147316-62147335 | None:intergenic | 35.0% | |
| ! | ATTGTTATTAGTGGTCCTTC+TGG | - | chr7_3:62147316-62147335 | Msa1115050:intron | 35.0% |
| CAGAAAAACCAAACATCGAA+GGG | + | chr7_3:62147384-62147403 | None:intergenic | 35.0% | |
| ACAGAAAAACCAAACATCGA+AGG | + | chr7_3:62147385-62147404 | None:intergenic | 35.0% | |
| CCATCTTTCTCCATATTTCT+CGG | + | chr7_3:62147427-62147446 | None:intergenic | 35.0% | |
| CGAGAAATATGGAGAAAGAT+GGG | - | chr7_3:62147425-62147444 | Msa1115050:intron | 35.0% | |
| GAGAAATATGGAGAAAGATG+GGG | - | chr7_3:62147426-62147445 | Msa1115050:intron | 35.0% | |
| TCACACTCTTCTCAGTAAAA+TGG | + | chr7_3:62147459-62147478 | None:intergenic | 35.0% | |
| !! | TTTTACTGAGAAGAGTGTGA+TGG | - | chr7_3:62147459-62147478 | Msa1115050:CDS | 35.0% |
| ATGGAGAAAGAGATCAAAAG+TGG | - | chr7_3:62147478-62147497 | Msa1115050:CDS | 35.0% | |
| ! | TCTGTCCATGGTAATTTGTA+TGG | - | chr7_3:62147520-62147539 | Msa1115050:CDS | 35.0% |
| ! | CTGTCCATGGTAATTTGTAT+GGG | - | chr7_3:62147521-62147540 | Msa1115050:CDS | 35.0% |
| GTAAGACTTGTCGAAATCTA+TGG | + | chr7_3:62147702-62147721 | None:intergenic | 35.0% | |
| TTCATTCTGAGTTCAGCTAA+AGG | - | chr7_3:62147727-62147746 | Msa1115050:CDS | 35.0% | |
| AATCCACAGTTCAGCAATAA+TGG | + | chr7_3:62147853-62147872 | None:intergenic | 35.0% | |
| TGGACAGACAAAGATGAATA+TGG | + | chr7_3:62148039-62148058 | None:intergenic | 35.0% | |
| ! | AGAGTGTTATGACAGACTTA+AGG | - | chr7_3:62148293-62148312 | Msa1115050:intron | 35.0% |
| !!! | TAAGAACTTTTTCAGGATCG+AGG | + | chr7_3:62148345-62148364 | None:intergenic | 35.0% |
| TTCATTGGTGCAGAAATTAC+TGG | - | chr7_3:62148384-62148403 | Msa1115050:CDS | 35.0% | |
| TCATTGGTGCAGAAATTACT+GGG | - | chr7_3:62148385-62148404 | Msa1115050:CDS | 35.0% | |
| CATGTCAGTATTTACCTTCA+TGG | + | chr7_3:62148498-62148517 | None:intergenic | 35.0% | |
| ! | GTTGGTAGATTAATCTCTCT+AGG | + | chr7_3:62148545-62148564 | None:intergenic | 35.0% |
| TTAGACACTGAATGATCAGT+TGG | + | chr7_3:62148563-62148582 | None:intergenic | 35.0% | |
| ! | AGTTCTTTTGGATCACCTTT+TGG | - | chr7_3:62148780-62148799 | Msa1115050:intron | 35.0% |
| !! | GATCTTGTATTTGACTTGAC+AGG | - | chr7_3:62148884-62148903 | Msa1115050:intron | 35.0% |
| !!! | GGACTTGATTTTCAAGTCAT+AGG | - | chr7_3:62148958-62148977 | Msa1115050:intron | 35.0% |
| AACTTTAGCCACAACTAACT+TGG | - | chr7_3:62149012-62149031 | Msa1115050:intron | 35.0% | |
| !! | GAAATTGACTTGAGTAGTGT+TGG | - | chr7_3:62149150-62149169 | Msa1115050:five_prime_UTR | 35.0% |
| ACACATTATTATTCCCTGCA+TGG | - | chr7_3:62149178-62149197 | Msa1115050:five_prime_UTR | 35.0% | |
| CACATTATTATTCCCTGCAT+GGG | - | chr7_3:62149179-62149198 | Msa1115050:five_prime_UTR | 35.0% | |
| CCCACAAAGAAAACAGAAAC+AGG | - | chr7_3:62145630-62145649 | Msa1115050:three_prime_UTR | 40.0% | |
| ! | TTTTACAAACCTTCAAGGGC+AGG | + | chr7_3:62145665-62145684 | None:intergenic | 40.0% |
| GAGGGTTTGAAGAAAATGTG+AGG | + | chr7_3:62145739-62145758 | None:intergenic | 40.0% | |
| CGTTCTTGCTTCGTTTCTTA+AGG | - | chr7_3:62145865-62145884 | Msa1115050:three_prime_UTR | 40.0% | |
| TCATCAACTTCCAGGAAAAC+AGG | + | chr7_3:62146196-62146215 | None:intergenic | 40.0% | |
| !! | TCCTGGAAGTTGATGAAATC+TGG | - | chr7_3:62146200-62146219 | Msa1115050:intron | 40.0% |
| !! | CCTGGAAGTTGATGAAATCT+GGG | - | chr7_3:62146201-62146220 | Msa1115050:intron | 40.0% |
| TGCAAAACAACTACTGTCGT+TGG | - | chr7_3:62146683-62146702 | Msa1115050:intron | 40.0% | |
| TACTGTCGTTGGCGAAAAAA+CGG | - | chr7_3:62146694-62146713 | Msa1115050:intron | 40.0% | |
| ACATACTGTCAAACAAACGG+AGG | + | chr7_3:62146820-62146839 | None:intergenic | 40.0% | |
| GTTTGACAGTATGTCACTGT+TGG | - | chr7_3:62146826-62146845 | Msa1115050:intron | 40.0% | |
| !! | CTTAGCCTCATAGCTGTTTT+TGG | - | chr7_3:62146924-62146943 | Msa1115050:intron | 40.0% |
| ! | CGGATCCTAGTTCTTAAGAA+AGG | - | chr7_3:62147054-62147073 | Msa1115050:intron | 40.0% |
| CCATATCTGGTCATCTGATT+TGG | + | chr7_3:62147082-62147101 | None:intergenic | 40.0% | |
| CCAAATCAGATGACCAGATA+TGG | - | chr7_3:62147079-62147098 | Msa1115050:intron | 40.0% | |
| ! | TGACCAGATATGGTTTCTAG+AGG | - | chr7_3:62147089-62147108 | Msa1115050:intron | 40.0% |
| ! | TCACCTCTAGAAACCATATC+TGG | + | chr7_3:62147095-62147114 | None:intergenic | 40.0% |
| AGGTGGACACTGAATATGTT+AGG | - | chr7_3:62147221-62147240 | Msa1115050:intron | 40.0% | |
| TAGGCAGCAGAGGAAAAAAT+TGG | - | chr7_3:62147240-62147259 | Msa1115050:intron | 40.0% | |
| AGGCAGCAGAGGAAAAAATT+GGG | - | chr7_3:62147241-62147260 | Msa1115050:intron | 40.0% | |
| AAGGAATTCCCTTCGATGTT+TGG | - | chr7_3:62147373-62147392 | Msa1115050:intron | 40.0% | |
| CCGAGAAATATGGAGAAAGA+TGG | - | chr7_3:62147424-62147443 | Msa1115050:intron | 40.0% | |
| TGGTCCCATACAAATTACCA+TGG | + | chr7_3:62147528-62147547 | None:intergenic | 40.0% | |
| ACATTAAATCGTGGGTACAC+TGG | - | chr7_3:62147653-62147672 | Msa1115050:CDS | 40.0% | |
| CCTTACATTCTCGAAGTCAT+AGG | + | chr7_3:62147811-62147830 | None:intergenic | 40.0% | |
| CCTATGACTTCGAGAATGTA+AGG | - | chr7_3:62147808-62147827 | Msa1115050:intron | 40.0% | |
| ! | GTGGATTATAGCGTTGTTAG+AGG | - | chr7_3:62147866-62147885 | Msa1115050:intron | 40.0% |
| AACCTCTCATTACGTTGTTG+TGG | - | chr7_3:62147900-62147919 | Msa1115050:intron | 40.0% | |
| AACCACAACAACGTAATGAG+AGG | + | chr7_3:62147905-62147924 | None:intergenic | 40.0% | |
| CAATATCAAGAATGCACCTC+TGG | + | chr7_3:62147974-62147993 | None:intergenic | 40.0% | |
| TTCAAGGAGCAAGATCTGTT+AGG | - | chr7_3:62147997-62148016 | Msa1115050:CDS | 40.0% | |
| TCAAGGAGCAAGATCTGTTA+GGG | - | chr7_3:62147998-62148017 | Msa1115050:CDS | 40.0% | |
| TTCTCAAGCTCTTCCATTGA+TGG | + | chr7_3:62148062-62148081 | None:intergenic | 40.0% | |
| GTCTGTCATAACACTCTTCA+AGG | + | chr7_3:62148290-62148309 | None:intergenic | 40.0% | |
| ! | GAGGAAGTTTTTGCTTTAGC+AGG | + | chr7_3:62148326-62148345 | None:intergenic | 40.0% |
| CAGAAATTACTGGGACTTGA+TGG | - | chr7_3:62148394-62148413 | Msa1115050:CDS | 40.0% | |
| ATCATAAGCTGCATCTCTTC+TGG | - | chr7_3:62148599-62148618 | Msa1115050:intron | 40.0% | |
| !!! | TGTTTTAGCACTCAAGGGTA+AGG | - | chr7_3:62148857-62148876 | Msa1115050:intron | 40.0% |
| ! | TTGACTTGACAGGATCATGT+TGG | - | chr7_3:62148894-62148913 | Msa1115050:intron | 40.0% |
| TTGGATGTTTCCTCACTGAA+AGG | - | chr7_3:62148913-62148932 | Msa1115050:intron | 40.0% | |
| TGGATGTTTCCTCACTGAAA+GGG | - | chr7_3:62148914-62148933 | Msa1115050:intron | 40.0% | |
| ATTATCTCATTGCCCATGCA+GGG | + | chr7_3:62149194-62149213 | None:intergenic | 40.0% | |
| AATTATCTCATTGCCCATGC+AGG | + | chr7_3:62149195-62149214 | None:intergenic | 40.0% | |
| GCTCAAAAGAAAAAAGGGGG+CGG | + | chr7_3:62145697-62145716 | None:intergenic | 45.0% | |
| !! | TTGTGTTGCTCCTGTTTTCC+TGG | - | chr7_3:62146183-62146202 | Msa1115050:intron | 45.0% |
| CCCAGATTTCATCAACTTCC+AGG | + | chr7_3:62146204-62146223 | None:intergenic | 45.0% | |
| !! | GTTCCTTGTTGATGACCTTC+AGG | - | chr7_3:62146622-62146641 | Msa1115050:intron | 45.0% |
| CATCCTGAAGGTCATCAACA+AGG | + | chr7_3:62146628-62146647 | None:intergenic | 45.0% | |
| !! | CTTGTTGATGACCTTCAGGA+TGG | - | chr7_3:62146626-62146645 | Msa1115050:intron | 45.0% |
| CATTAAGAGGTCCATCCTGA+AGG | + | chr7_3:62146640-62146659 | None:intergenic | 45.0% | |
| CTTCAGGATGGACCTCTTAA+TGG | - | chr7_3:62146638-62146657 | Msa1115050:intron | 45.0% | |
| ! | TTGACCGTAGTCTTGGAGAA+TGG | - | chr7_3:62146887-62146906 | Msa1115050:intron | 45.0% |
| CTGACCATTCTCCAAGACTA+CGG | + | chr7_3:62146894-62146913 | None:intergenic | 45.0% | |
| !!! | GCCTCATAGCTGTTTTTGGA+AGG | - | chr7_3:62146928-62146947 | Msa1115050:CDS | 45.0% |
| GCCTTCCAAAAACAGCTATG+AGG | + | chr7_3:62146932-62146951 | None:intergenic | 45.0% | |
| ACCAAACCCTTGTCATGCAA+TGG | - | chr7_3:62147006-62147025 | Msa1115050:CDS | 45.0% | |
| TCCATTGCATGACAAGGGTT+TGG | + | chr7_3:62147010-62147029 | None:intergenic | 45.0% | |
| GAGTGTCCATTGCATGACAA+GGG | + | chr7_3:62147015-62147034 | None:intergenic | 45.0% | |
| TGAGTGTCCATTGCATGACA+AGG | + | chr7_3:62147016-62147035 | None:intergenic | 45.0% | |
| ! | GATCCGGTTTTCGAAAAGCA+CGG | + | chr7_3:62147040-62147059 | None:intergenic | 45.0% |
| CTGAATATGTTAGGCAGCAG+AGG | - | chr7_3:62147230-62147249 | Msa1115050:intron | 45.0% | |
| GGCAGCAGAGGAAAAAATTG+GGG | - | chr7_3:62147242-62147261 | Msa1115050:intron | 45.0% | |
| GAGGAAAAAATTGGGGACTG+AGG | - | chr7_3:62147249-62147268 | Msa1115050:intron | 45.0% | |
| ! | TGAGGTTGTTGCTTGGAGTA+AGG | - | chr7_3:62147267-62147286 | Msa1115050:intron | 45.0% |
| ! | GAGGTTGTTGCTTGGAGTAA+GGG | - | chr7_3:62147268-62147287 | Msa1115050:intron | 45.0% |
| !! | ATTAGTGGTCCTTCTGGAGT+TGG | - | chr7_3:62147322-62147341 | Msa1115050:intron | 45.0% |
| GTTCCTTTACCAACTCCAGA+AGG | + | chr7_3:62147334-62147353 | None:intergenic | 45.0% | |
| TCTCCATATTTCTCGGAGCA+CGG | + | chr7_3:62147420-62147439 | None:intergenic | 45.0% | |
| ! | CTCGAATTTGCTTCTGTCCA+TGG | - | chr7_3:62147508-62147527 | Msa1115050:CDS | 45.0% |
| TTTGTATGGGACCAGTGTTG+AGG | - | chr7_3:62147534-62147553 | Msa1115050:CDS | 45.0% | |
| GAGCCATTATTGCTGAACTG+TGG | - | chr7_3:62147847-62147866 | Msa1115050:intron | 45.0% | |
| CTTTGTCTGTCCACCATCAA+TGG | - | chr7_3:62148046-62148065 | Msa1115050:intron | 45.0% | |
| TCAAGCTCTTCCATTGATGG+TGG | + | chr7_3:62148059-62148078 | None:intergenic | 45.0% | |
| GAGCATTACGCAATCGCTTT+AGG | + | chr7_3:62148206-62148225 | None:intergenic | 45.0% | |
| AAAGCGATTGCGTAATGCTC+AGG | - | chr7_3:62148206-62148225 | Msa1115050:intron | 45.0% | |
| GTTGCAACTGCACCCAAATT+AGG | - | chr7_3:62148421-62148440 | Msa1115050:intron | 45.0% | |
| ! | TTAATCTCTCTAGGTGCTGC+TGG | + | chr7_3:62148536-62148555 | None:intergenic | 45.0% |
| CATCTCTTCTGGACTTGACA+AGG | - | chr7_3:62148610-62148629 | Msa1115050:intron | 45.0% | |
| GGATGTTTCCTCACTGAAAG+GGG | - | chr7_3:62148915-62148934 | Msa1115050:intron | 45.0% | |
| GATGTTTCCTCACTGAAAGG+GGG | - | chr7_3:62148916-62148935 | Msa1115050:intron | 45.0% | |
| GTAGTTGTACACCTTGTGTC+TGG | - | chr7_3:62149292-62149311 | Msa1115050:five_prime_UTR | 45.0% | |
| ACCTTGTGTCTGGCTAGATA+TGG | - | chr7_3:62149302-62149321 | Msa1115050:five_prime_UTR | 45.0% | |
| ACCATATCTAGCCAGACACA+AGG | + | chr7_3:62149306-62149325 | None:intergenic | 45.0% | |
| TTGTGTCTGGCTAGATATGG+TGG | - | chr7_3:62149305-62149324 | Msa1115050:five_prime_UTR | 45.0% | |
| !!! | AAAAATGAATTTTTTTAAAT+GGG | + | chr7_3:62145979-62145998 | None:intergenic | 5.0% |
| !!! | AAAAAATGAATTTTTTTAAA+TGG | + | chr7_3:62145980-62145999 | None:intergenic | 5.0% |
| !! | TATTTAAAAATTAAAATATC+AGG | + | chr7_3:62147949-62147968 | None:intergenic | 5.0% |
| AGGTCATCAACAAGGAACGC+TGG | + | chr7_3:62146620-62146639 | None:intergenic | 50.0% | |
| !!! | GGAGGCCCGGTTTTTGTTTT+AGG | + | chr7_3:62146802-62146821 | None:intergenic | 50.0% |
| GTCACTGTTGGAGCTGATGA+TGG | - | chr7_3:62146838-62146857 | Msa1115050:intron | 50.0% | |
| !! | GTTTGGTGCCTAGCACAGTT+GGG | + | chr7_3:62146993-62147012 | None:intergenic | 50.0% |
| ! | CAGCCGTGCTTTTCGAAAAC+CGG | - | chr7_3:62147034-62147053 | Msa1115050:intron | 50.0% |
| ! | GCTTGGAGTAAGGGTGTGAT+AGG | - | chr7_3:62147277-62147296 | Msa1115050:intron | 50.0% |
| !! | GGTCCTTCTGGAGTTGGTAA+AGG | - | chr7_3:62147328-62147347 | Msa1115050:intron | 50.0% |
| AACCCGTGCTCCGAGAAATA+TGG | - | chr7_3:62147414-62147433 | Msa1115050:intron | 50.0% | |
| CTCCATATTTCTCGGAGCAC+GGG | + | chr7_3:62147419-62147438 | None:intergenic | 50.0% | |
| CACTTCAACAGCCTCAACAC+TGG | + | chr7_3:62147548-62147567 | None:intergenic | 50.0% | |
| ! | CAGTGTTGAGGCTGTTGAAG+TGG | - | chr7_3:62147546-62147565 | Msa1115050:CDS | 50.0% |
| GTTGAAGTGGTAGCTGATGC+AGG | - | chr7_3:62147559-62147578 | Msa1115050:CDS | 50.0% | |
| AAACAGAGGGACTGAGACTG+AGG | - | chr7_3:62148173-62148192 | Msa1115050:intron | 50.0% | |
| TCAAGTCCTCTTGTCCTTCC+AGG | + | chr7_3:62148946-62148965 | None:intergenic | 50.0% | |
| CGAAAATGCGACGCTCGAAA+AGG | - | chr7_3:62149061-62149080 | Msa1115050:intron | 50.0% | |
| ACAAACCTTCAAGGGCAGGC+AGG | + | chr7_3:62145661-62145680 | None:intergenic | 55.0% | |
| CTGTCAAACAAACGGAGGCC+CGG | + | chr7_3:62146815-62146834 | None:intergenic | 55.0% | |
| AGGGTTCACCCAACTGTGCT+AGG | - | chr7_3:62146982-62147001 | Msa1115050:CDS | 55.0% | |
| !! | GGTTTGGTGCCTAGCACAGT+TGG | + | chr7_3:62146994-62147013 | None:intergenic | 55.0% |
| TGGGGACTGAGGTTGTTGCT+TGG | - | chr7_3:62147260-62147279 | Msa1115050:intron | 55.0% | |
| ATCGTGGGTACACTGGTGTG+TGG | - | chr7_3:62147660-62147679 | Msa1115050:CDS | 55.0% | |
| !! | TTGAGAAGCGCCTTCGTGAC+AGG | - | chr7_3:62148075-62148094 | Msa1115050:intron | 55.0% |
| CCACTACTCACCTGTCACGA+AGG | + | chr7_3:62148088-62148107 | None:intergenic | 55.0% | |
| CCTTCGTGACAGGTGAGTAG+TGG | - | chr7_3:62148085-62148104 | Msa1115050:intron | 55.0% | |
| GCTCAGGCTGAGATTGAGCA+AGG | - | chr7_3:62148222-62148241 | Msa1115050:intron | 55.0% | |
| AGGTGCACCCCCTTTCAGTG+AGG | + | chr7_3:62148926-62148945 | None:intergenic | 60.0% | |
| ! | TCACTGAAAGGGGGTGCACC+TGG | - | chr7_3:62148925-62148944 | Msa1115050:intron | 60.0% |
| ! | TGAAAGGGGGTGCACCTGGA+AGG | - | chr7_3:62148929-62148948 | Msa1115050:intron | 60.0% |
| GGTGCACCTGGAAGGACAAG+AGG | - | chr7_3:62148937-62148956 | Msa1115050:intron | 60.0% | |
| TCCTGCCTGCCTGCCCTTGA+AGG | - | chr7_3:62145653-62145672 | Msa1115050:three_prime_UTR | 65.0% | |
| ACCTTCAAGGGCAGGCAGGC+AGG | + | chr7_3:62145657-62145676 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 62145606 | 62149415 | 62145606 | ID=Msa1115050;Name=Msa1115050 |
| chr7_3 | mRNA | 62145606 | 62149415 | 62145606 | ID=Msa1115050-mRNA-1;Parent=Msa1115050;Name=Msa1115050-mRNA-1;_AED=0.09;_eAED=0.09;_QI=315|0.9|0.90|1|0.8|0.81|11|413|371 |
| chr7_3 | exon | 62145606 | 62146115 | 62145606 | ID=Msa1115050-mRNA-1:exon:14358;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62146445 | 62146484 | 62146445 | ID=Msa1115050-mRNA-1:exon:14357;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62146579 | 62146624 | 62146579 | ID=Msa1115050-mRNA-1:exon:14356;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62146707 | 62146842 | 62146707 | ID=Msa1115050-mRNA-1:exon:14355;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62146925 | 62147046 | 62146925 | ID=Msa1115050-mRNA-1:exon:14354;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62147436 | 62147798 | 62147436 | ID=Msa1115050-mRNA-1:exon:14353;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62147911 | 62148037 | 62147911 | ID=Msa1115050-mRNA-1:exon:14352;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62148113 | 62148186 | 62148113 | ID=Msa1115050-mRNA-1:exon:14351;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62148306 | 62148413 | 62148306 | ID=Msa1115050-mRNA-1:exon:14350;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62148581 | 62148617 | 62148581 | ID=Msa1115050-mRNA-1:exon:14349;Parent=Msa1115050-mRNA-1 |
| chr7_3 | exon | 62149135 | 62149415 | 62149135 | ID=Msa1115050-mRNA-1:exon:14348;Parent=Msa1115050-mRNA-1 |
| chr7_3 | five_prime_UTR | 62149135 | 62149415 | 62149135 | ID=Msa1115050-mRNA-1:five_prime_utr;Parent=Msa1115050-mRNA-1 |
| chr7_3 | five_prime_UTR | 62148584 | 62148617 | 62148584 | ID=Msa1115050-mRNA-1:five_prime_utr;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62148581 | 62148583 | 62148581 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62148306 | 62148413 | 62148306 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62148113 | 62148186 | 62148113 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62147911 | 62148037 | 62147911 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62147436 | 62147798 | 62147436 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62146925 | 62147046 | 62146925 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62146707 | 62146842 | 62146707 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62146579 | 62146624 | 62146579 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62146445 | 62146484 | 62146445 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | CDS | 62146019 | 62146115 | 62146019 | ID=Msa1115050-mRNA-1:cds;Parent=Msa1115050-mRNA-1 |
| chr7_3 | three_prime_UTR | 62145606 | 62146018 | 62145606 | ID=Msa1115050-mRNA-1:three_prime_utr;Parent=Msa1115050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
