Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074660 | XP_039683647.1 | 97.598 | 458 | 11 | 0 | 1 | 458 | 1 | 458 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074660 | sp|Q9LZV3|MAN6_ARATH | 66.304 | 460 | 136 | 4 | 3 | 458 | 4 | 448 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074660 | A0A396H2J1 | 97.598 | 458 | 11 | 0 | 1 | 458 | 1 | 458 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074660 | Msa1111690 | 0.828399 | 9.188178e-55 | -8.615850e-47 |
| Msa1074660 | Msa1154150 | 0.833570 | 4.942564e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074660 | MtrunA17_Chr7g0245051 | 97.598 | 458 | 11 | 0 | 1 | 458 | 1 | 458 | 0.0 | 939 |
| Msa1074660 | MtrunA17_Chr7g0245101 | 94.771 | 459 | 23 | 1 | 1 | 458 | 1 | 459 | 0.0 | 889 |
| Msa1074660 | MtrunA17_Chr8g0334501 | 78.414 | 454 | 88 | 3 | 8 | 457 | 13 | 460 | 0.0 | 744 |
| Msa1074660 | MtrunA17_Chr4g0020521 | 48.813 | 379 | 191 | 1 | 60 | 438 | 35 | 410 | 3.79e-145 | 421 |
| Msa1074660 | MtrunA17_Chr5g0404601 | 51.697 | 383 | 182 | 2 | 59 | 440 | 31 | 411 | 4.51e-144 | 419 |
| Msa1074660 | MtrunA17_Chr1g0193531 | 52.022 | 371 | 175 | 2 | 59 | 429 | 29 | 396 | 4.32e-143 | 415 |
| Msa1074660 | MtrunA17_Chr1g0193611 | 49.865 | 371 | 184 | 1 | 59 | 429 | 32 | 400 | 1.59e-141 | 411 |
| Msa1074660 | MtrunA17_Chr7g0271511 | 50.135 | 371 | 179 | 2 | 59 | 429 | 62 | 426 | 8.01e-137 | 400 |
| Msa1074660 | MtrunA17_Chr1g0193551 | 51.475 | 373 | 173 | 5 | 59 | 429 | 35 | 401 | 8.03e-137 | 399 |
| Msa1074660 | MtrunA17_Chr1g0193601 | 49.326 | 371 | 186 | 1 | 59 | 429 | 32 | 400 | 2.18e-136 | 398 |
| Msa1074660 | MtrunA17_Chr3g0141751 | 47.906 | 382 | 190 | 4 | 49 | 428 | 17 | 391 | 2.46e-135 | 395 |
| Msa1074660 | MtrunA17_Chr4g0040121 | 48.469 | 392 | 199 | 3 | 43 | 432 | 24 | 414 | 6.48e-135 | 395 |
| Msa1074660 | MtrunA17_Chr2g0324441 | 46.579 | 380 | 200 | 2 | 53 | 429 | 34 | 413 | 6.11e-129 | 380 |
| Msa1074660 | MtrunA17_Chr1g0193541 | 45.699 | 372 | 163 | 4 | 60 | 429 | 32 | 366 | 5.32e-114 | 341 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074660 | AT5G01930.1 | 66.304 | 460 | 136 | 4 | 3 | 458 | 4 | 448 | 0.0 | 660 |
| Msa1074660 | AT5G66460.1 | 50.000 | 382 | 188 | 1 | 59 | 440 | 31 | 409 | 1.09e-140 | 410 |
| Msa1074660 | AT3G10890.1 | 47.059 | 374 | 196 | 2 | 59 | 431 | 31 | 403 | 5.49e-135 | 395 |
| Msa1074660 | AT3G10900.1 | 48.533 | 375 | 190 | 3 | 59 | 431 | 29 | 402 | 2.60e-133 | 390 |
| Msa1074660 | AT4G28320.1 | 46.410 | 390 | 199 | 2 | 59 | 438 | 41 | 430 | 8.72e-131 | 385 |
| Msa1074660 | AT2G20680.1 | 47.480 | 377 | 197 | 1 | 54 | 429 | 37 | 413 | 2.53e-130 | 384 |
| Msa1074660 | AT1G02310.1 | 47.733 | 375 | 185 | 6 | 59 | 428 | 29 | 397 | 5.04e-124 | 367 |
| Msa1074660 | AT1G02310.2 | 47.733 | 375 | 185 | 6 | 59 | 428 | 49 | 417 | 7.54e-124 | 367 |
| Msa1074660 | AT3G30540.1 | 42.687 | 335 | 153 | 3 | 59 | 392 | 29 | 325 | 2.01e-94 | 288 |
Find 138 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAACCTATCACAAATTA+TGG | 0.137834 | 7_2:-72553236 | Msa1074660:CDS |
| CACATTGGCCATGCTCTATT+AGG | 0.195101 | 7_2:+72553388 | None:intergenic |
| AACAATCTCAATGAAGAAAA+TGG | 0.201437 | 7_2:-72553357 | Msa1074660:exon |
| GGTCAGCCTTTCTATATAAA+TGG | 0.201660 | 7_2:-72552764 | Msa1074660:CDS |
| CTCCTTTCTTTGTGGAGTTT+AGG | 0.259533 | 7_2:+72551010 | Msa1074650:intron |
| CTTCATTGAGATTGTTTACT+TGG | 0.269540 | 7_2:+72553364 | None:intergenic |
| CTGAGTTTGATCAATTTCTA+TGG | 0.277481 | 7_2:-72553449 | Msa1074660:five_prime_UTR |
| CCAATCTCCACTAGGTGTTT+TGG | 0.280198 | 7_2:+72551825 | Msa1074650:intron |
| GGGACTTGTAGTAGCTTCTA+AGG | 0.281768 | 7_2:+72552231 | Msa1074650:intron |
| ATCAGGAACCATCAAGTTCT+TGG | 0.295987 | 7_2:-72551717 | Msa1074660:CDS |
| GCTGACCATTCACCACAAAT+TGG | 0.318298 | 7_2:+72552780 | None:intergenic |
| TCCTGAAGGAACGGATAATA+TGG | 0.326511 | 7_2:-72550953 | Msa1074660:CDS |
| TTCCGACAATTATGCATAAC+TGG | 0.327327 | 7_2:+72550636 | Msa1074650:intron |
| TCCACTCCCTCCTTTCTTTG+TGG | 0.336362 | 7_2:+72551002 | Msa1074650:intron |
| TCCCACAGGTGACAAGTTAC+AGG | 0.338503 | 7_2:-72551997 | Msa1074660:intron |
| TATTATCATTGGCCAACAAT+TGG | 0.344124 | 7_2:-72552346 | Msa1074660:CDS |
| ATTCACAAATATCACTTATA+AGG | 0.352293 | 7_2:-72552075 | Msa1074660:CDS |
| TCATACCCATAATTTGTGAT+AGG | 0.353905 | 7_2:+72553230 | None:intergenic |
| TCCATATTATCCGTTCCTTC+AGG | 0.368709 | 7_2:+72550952 | Msa1074650:intron |
| CGAACTTGGGCTTTCAATGA+TGG | 0.371721 | 7_2:-72552638 | Msa1074660:CDS |
| AAGCAAAGAAATACAAAATC+AGG | 0.373174 | 7_2:-72552373 | Msa1074660:CDS |
| ACTTGTTGAGCATATGCATT+TGG | 0.373847 | 7_2:+72551753 | Msa1074650:intron |
| GTATGACAGTTTGTCGAACT+TGG | 0.394546 | 7_2:-72552652 | Msa1074660:CDS |
| GGAAAGCACAATATGTGAAA+TGG | 0.397390 | 7_2:-72552310 | Msa1074660:CDS |
| TCTGCAGGCCTTGGACTTTG+TGG | 0.402318 | 7_2:-72552402 | Msa1074660:intron |
| ACATTGGCCATGCTCTATTA+GGG | 0.409711 | 7_2:+72553389 | None:intergenic |
| ACCATATGCCTCCCAATTGT+TGG | 0.411289 | 7_2:+72552334 | Msa1074650:intron |
| TAGGTTTATGTACATGATCT+TGG | 0.412451 | 7_2:+72553249 | None:intergenic |
| TTGAATCCATTTATATAGAA+AGG | 0.422648 | 7_2:+72552758 | Msa1074650:intron |
| CTTACAACTCCAATTGCATC+TGG | 0.426201 | 7_2:+72550831 | Msa1074650:intron |
| GAAAGCACAATATGTGAAAT+GGG | 0.430792 | 7_2:-72552309 | Msa1074660:CDS |
| TGAAGTCTTTGAGGTGTTGA+AGG | 0.436348 | 7_2:+72551783 | Msa1074650:intron |
| AAGAAAGGAGGGAGTGGAGC+TGG | 0.438177 | 7_2:-72550997 | Msa1074660:CDS |
| ATTTCTGTAGGGCCCGCCCT+TGG | 0.439191 | 7_2:+72552615 | Msa1074650:intron |
| CCAAAACACCTAGTGGAGAT+TGG | 0.439901 | 7_2:-72551825 | Msa1074660:CDS |
| AATCAGGCTAATATTATCAT+TGG | 0.440368 | 7_2:-72552357 | Msa1074660:CDS |
| ATTATCATTGGCCAACAATT+GGG | 0.441837 | 7_2:-72552345 | Msa1074660:CDS |
| GAGGATGCTGAAAAGTATCT+TGG | 0.444822 | 7_2:-72551132 | Msa1074660:CDS |
| TACCAGTTATGCATAATTGT+CGG | 0.445652 | 7_2:-72550638 | Msa1074660:three_prime_UTR |
| TAAATGGATTCAACACATAC+TGG | 0.447247 | 7_2:-72552748 | Msa1074660:CDS |
| TGGCAAATGGTAGGGAAGAA+AGG | 0.450024 | 7_2:-72552806 | Msa1074660:CDS |
| AACATCACCTTTGTTTCCTA+AGG | 0.456186 | 7_2:+72553588 | None:intergenic |
| ACAATCTCAATGAAGAAAAT+GGG | 0.457879 | 7_2:-72553356 | Msa1074660:exon |
| TTTCAATGATGGCCAAGGGC+GGG | 0.467261 | 7_2:-72552627 | Msa1074660:CDS |
| CTATATGTTGAGTTGTAGCC+AGG | 0.468183 | 7_2:+72551066 | Msa1074650:intron |
| ATCCTAAACTCCACAAAGAA+AGG | 0.469378 | 7_2:-72551012 | Msa1074660:CDS |
| ATATCTCATTTGTAAAATCA+TGG | 0.469699 | 7_2:-72551170 | Msa1074660:CDS |
| TGTGTTCTACCAGATGCAAT+TGG | 0.470041 | 7_2:-72550840 | Msa1074660:CDS |
| CTACTACAAGTCCCATGTTA+AGG | 0.470098 | 7_2:-72552222 | Msa1074660:intron |
| GGAAACCAATTTGTGGTGAA+TGG | 0.470394 | 7_2:-72552785 | Msa1074660:CDS |
| ATAGGATTGGATACAAGAAA+TGG | 0.474517 | 7_2:-72551871 | Msa1074660:intron |
| CTAGTGGAGATTGGACTAGA+AGG | 0.477254 | 7_2:-72551816 | Msa1074660:CDS |
| CAGGAAATACCTGCCACAAA+AGG | 0.479541 | 7_2:+72550971 | Msa1074650:intron |
| TTTCCTAAGGCACTTTCATG+TGG | 0.486224 | 7_2:+72553601 | None:intergenic |
| GAAAGGAACTTGCCTTAACA+TGG | 0.491232 | 7_2:+72552210 | Msa1074650:intron |
| GGATTGAACTGAAGTCTTTG+AGG | 0.494417 | 7_2:+72551774 | Msa1074650:intron |
| GGCCCTACAGAAATCCCCTT+CGG | 0.495084 | 7_2:-72552606 | Msa1074660:CDS |
| AGTCTACACCAAGAACTTGA+TGG | 0.497184 | 7_2:+72551709 | Msa1074650:intron |
| TGGGCTTTCAATGATGGCCA+AGG | 0.503485 | 7_2:-72552632 | Msa1074660:CDS |
| GGTGGATGAAGAGGCACAAA+AGG | 0.507529 | 7_2:-72553276 | Msa1074660:CDS |
| ATAAACCTATCACAAATTAT+GGG | 0.507531 | 7_2:-72553235 | Msa1074660:intron |
| TTGAACTTAGAATCAAAAGA+AGG | 0.507906 | 7_2:+72553312 | None:intergenic |
| GTGGGATCAGAGTTGCATCT+AGG | 0.510907 | 7_2:+72552014 | Msa1074650:intron |
| CTTTCAATGATGGCCAAGGG+CGG | 0.511432 | 7_2:-72552628 | Msa1074660:CDS |
| AAGGGTTACAATACTTGAAG+TGG | 0.512139 | 7_2:+72550894 | Msa1074650:intron |
| GAAGAAAGGAAACCAATTTG+TGG | 0.515996 | 7_2:-72552792 | Msa1074660:CDS |
| GCCAACAATTGGGAGGCATA+TGG | 0.519304 | 7_2:-72552335 | Msa1074660:CDS |
| TTCCTAAGGCACTTTCATGT+GGG | 0.524002 | 7_2:+72553602 | None:intergenic |
| CTCATTTGTAAAATCATGGA+TGG | 0.524777 | 7_2:-72551166 | Msa1074660:CDS |
| AAGCAAGCCTCGTGGATTGA+AGG | 0.524825 | 7_2:+72550875 | Msa1074650:intron |
| AATGCATATGCTCAACAAGT+TGG | 0.524998 | 7_2:-72551750 | Msa1074660:CDS |
| GGTGTATCATCCAAGGATCC+TGG | 0.525677 | 7_2:-72551084 | Msa1074660:CDS |
| TATGACAGTTTGTCGAACTT+GGG | 0.525967 | 7_2:-72552651 | Msa1074660:CDS |
| TGAGTTTGGTGTATCATCCA+AGG | 0.526819 | 7_2:-72551091 | Msa1074660:CDS |
| TGAGTTGTAGCCAGGATCCT+TGG | 0.527284 | 7_2:+72551074 | Msa1074650:intron |
| GTGAAATGGGGCAAAGATGC+TGG | 0.528082 | 7_2:-72552296 | Msa1074660:CDS |
| AACATGCTTCTATCTTAAGA+TGG | 0.528997 | 7_2:+72550685 | Msa1074650:intron |
| AAACCGAAGGGGATTTCTGT+AGG | 0.529426 | 7_2:+72552603 | Msa1074650:intron |
| TTATGACGAAGAAGTCTTCA+AGG | 0.529969 | 7_2:-72552582 | Msa1074660:intron |
| GAGGATGAATGGCAAATGGT+AGG | 0.530896 | 7_2:-72552815 | Msa1074660:CDS |
| TTGTAAGAAGAAGAAAATGT+TGG | 0.531641 | 7_2:-72550815 | Msa1074660:CDS |
| TCCACAAAGAAAGGAGGGAG+TGG | 0.538406 | 7_2:-72551003 | Msa1074660:CDS |
| CATCATCAGAGGTCAAGTTA+AGG | 0.540046 | 7_2:+72552273 | Msa1074650:intron |
| ATCAAACTCAGAAGATTAGC+GGG | 0.541385 | 7_2:+72553461 | None:intergenic |
| AACCCACATGAAAGTGCCTT+AGG | 0.542390 | 7_2:-72553604 | Msa1074660:five_prime_UTR |
| AACAATTGGGAGGCATATGG+TGG | 0.543604 | 7_2:-72552332 | Msa1074660:CDS |
| GGAAGAGGATGAATGGCAAA+TGG | 0.551281 | 7_2:-72552819 | Msa1074660:CDS |
| GATTGTTTACTTGGCCACAT+TGG | 0.552158 | 7_2:+72553373 | None:intergenic |
| AGGATGAATGGCAAATGGTA+GGG | 0.553575 | 7_2:-72552814 | Msa1074660:CDS |
| AGCAAGCCTCGTGGATTGAA+GGG | 0.560648 | 7_2:+72550876 | Msa1074650:intron |
| AACCTGTAACTTGTCACCTG+TGG | 0.562152 | 7_2:+72551995 | Msa1074650:intron |
| GCAATGGTTTATACAAGTGA+AGG | 0.562161 | 7_2:+72553551 | None:intergenic |
| CTACACAAATTCAACGTGCA+TGG | 0.563061 | 7_2:+72550721 | Msa1074650:intron |
| CTTCTAGTCCAATCTCCACT+AGG | 0.564151 | 7_2:+72551817 | Msa1074650:intron |
| GAAGTCTTTGAGGTGTTGAA+GGG | 0.566002 | 7_2:+72551784 | Msa1074650:intron |
| TTGTGGCAGGTATTTCCTGA+AGG | 0.566518 | 7_2:-72550967 | Msa1074660:CDS |
| ACCTGTAACTTGTCACCTGT+GGG | 0.569730 | 7_2:+72551996 | Msa1074650:intron |
| TATGGCTATAGCTTTACAGT+GGG | 0.572477 | 7_2:+72550749 | Msa1074650:intron |
| TTCACTTACCACAAAGTCCA+AGG | 0.575266 | 7_2:+72552394 | Msa1074650:intron |
| GGACTTGTAGTAGCTTCTAA+GGG | 0.576533 | 7_2:+72552232 | Msa1074650:intron |
| AATAATGTGGGACATGGAAG+AGG | 0.582210 | 7_2:-72552834 | Msa1074660:CDS |
| AACCGAAGGGGATTTCTGTA+GGG | 0.582430 | 7_2:+72552604 | Msa1074650:intron |
| TTCAAACAAGCATCCTCACT+AGG | 0.590988 | 7_2:-72552674 | Msa1074660:CDS |
| CTAAACTCCACAAAGAAAGG+AGG | 0.591140 | 7_2:-72551009 | Msa1074660:CDS |
| ATGGATGGATGCACACATAG+AGG | 0.592357 | 7_2:-72551151 | Msa1074660:CDS |
| GGGCTTTCAATGATGGCCAA+GGG | 0.594743 | 7_2:-72552631 | Msa1074660:CDS |
| GAGTGAAATAATGTGGGACA+TGG | 0.597084 | 7_2:-72552840 | Msa1074660:CDS |
| GGGACATGGAAGAGGATGAA+TGG | 0.597454 | 7_2:-72552826 | Msa1074660:CDS |
| TGTTAAGGAGTGAAATAATG+TGG | 0.599818 | 7_2:-72552847 | Msa1074660:intron |
| GATGAAGAGGCACAAAAGGA+AGG | 0.602151 | 7_2:-72553272 | Msa1074660:CDS |
| GCAGGTATTTCCTGAAGGAA+CGG | 0.606073 | 7_2:-72550962 | Msa1074660:CDS |
| AATTGATCCAAAACACCTAG+TGG | 0.607164 | 7_2:-72551832 | Msa1074660:CDS |
| GTTAAGGAGTGAAATAATGT+GGG | 0.609450 | 7_2:-72552846 | Msa1074660:intron |
| AGATGCAACTCTGATCCCAC+AGG | 0.612987 | 7_2:-72552011 | Msa1074660:CDS |
| CTTCTTCGTCATAAACCGAA+GGG | 0.617150 | 7_2:+72552591 | Msa1074650:intron |
| TAAACTCCACAAAGAAAGGA+GGG | 0.617337 | 7_2:-72551008 | Msa1074660:CDS |
| GAAAGTGCCTTAGGAAACAA+AGG | 0.617585 | 7_2:-72553595 | Msa1074660:five_prime_UTR |
| ATCATTGGCCAACAATTGGG+AGG | 0.617845 | 7_2:-72552342 | Msa1074660:CDS |
| GTTACAATACTTGAAGTGGA+AGG | 0.619163 | 7_2:+72550898 | Msa1074650:intron |
| GATCAAACTCAGAAGATTAG+CGG | 0.621759 | 7_2:+72553460 | None:intergenic |
| ACAAACTGTCATACCTAGTG+AGG | 0.622535 | 7_2:+72552661 | Msa1074650:intron |
| GGAACGGATAATATGGATGA+CGG | 0.623585 | 7_2:-72550946 | Msa1074660:CDS |
| ACTTCTTCGTCATAAACCGA+AGG | 0.627622 | 7_2:+72552590 | Msa1074650:intron |
| TAACATGCCCTAATAGAGCA+TGG | 0.629277 | 7_2:-72553396 | Msa1074660:five_prime_UTR |
| TTCACATGTATGCTGACTCA+TGG | 0.634191 | 7_2:-72551677 | Msa1074660:intron |
| CTAATAGAGCATGGCCAATG+TGG | 0.636265 | 7_2:-72553387 | Msa1074660:five_prime_UTR |
| ATTGCATCTGGTAGAACACA+AGG | 0.641862 | 7_2:+72550843 | Msa1074650:intron |
| ATATGGCTATAGCTTTACAG+TGG | 0.643440 | 7_2:+72550748 | Msa1074650:intron |
| TGAGTAGAAGTCATCATCAG+AGG | 0.649203 | 7_2:+72552262 | Msa1074650:intron |
| AAAGGAACTTGCCTTAACAT+GGG | 0.651206 | 7_2:+72552211 | Msa1074650:intron |
| ATATGTGTATCAGCAATTTG+TGG | 0.653037 | 7_2:+72551189 | Msa1074650:intron |
| TTCTTCGTCATAAACCGAAG+GGG | 0.666131 | 7_2:+72552592 | Msa1074650:intron |
| ACAATTGGGAGGCATATGGT+GGG | 0.672246 | 7_2:-72552331 | Msa1074660:CDS |
| AAAGCACAATATGTGAAATG+GGG | 0.673517 | 7_2:-72552308 | Msa1074660:CDS |
| GTTGAACAAAGCAAGCCTCG+TGG | 0.681133 | 7_2:+72550867 | Msa1074650:intron |
| GCTGCAGATAACTCCACCAG+AGG | 0.697287 | 7_2:-72552713 | Msa1074660:CDS |
| TTGTAACCCTTCAATCCACG+AGG | 0.744151 | 7_2:-72550882 | Msa1074660:CDS |
| CACCAGAGGAAAAGTCACTG+AGG | 0.767981 | 7_2:-72552699 | Msa1074660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGTTTATTAAAGTA+TGG | - | chr7_2:72551058-72551077 | Msa1074660:CDS | 10.0% |
| !! | AAATTAAACTCATTAAGTTA+AGG | + | chr7_2:72551640-72551659 | Msa1074650:intron | 15.0% |
| !! | AGAAAATGTATATATTACAA+GGG | + | chr7_2:72552613-72552632 | Msa1074650:intron | 15.0% |
| !! | TAGAAAATGTATATATTACA+AGG | + | chr7_2:72552614-72552633 | Msa1074650:intron | 15.0% |
| !! | ATAAACCTATCACAAATTAT+GGG | - | chr7_2:72550957-72550976 | Msa1074660:CDS | 20.0% |
| !! | TATAAAATATAACAGCTAGA+GGG | + | chr7_2:72550995-72551014 | Msa1074650:intron | 20.0% |
| !! | ATATAAAATATAACAGCTAG+AGG | + | chr7_2:72550996-72551015 | Msa1074650:intron | 20.0% |
| !! | TACTAAACTAAAATGATCAT+AGG | + | chr7_2:72551153-72551172 | Msa1074650:intron | 20.0% |
| !!! | CCTTTTGTTTAAAACTTTTT+CGG | - | chr7_2:72551229-72551248 | Msa1074660:intron | 20.0% |
| !!! | AATATTTGATTCAGTTTTCA+AGG | + | chr7_2:72551310-72551329 | Msa1074650:intron | 20.0% |
| !! | TTGAAAACTGAATCAAATAT+TGG | - | chr7_2:72551309-72551328 | Msa1074660:intron | 20.0% |
| !!! | CAAATATTGGTTTTTTGTAA+TGG | - | chr7_2:72551322-72551341 | Msa1074660:intron | 20.0% |
| !! | TTGAATCCATTTATATAGAA+AGG | + | chr7_2:72551437-72551456 | Msa1074650:intron | 20.0% |
| !! | ATTCACAAATATCACTTATA+AGG | - | chr7_2:72552117-72552136 | Msa1074660:intron | 20.0% |
| !! | CACTTGTGAATATATATTAT+AGG | - | chr7_2:72552303-72552322 | Msa1074660:CDS | 20.0% |
| !! | GTGAATATATATTATAGGAT+TGG | - | chr7_2:72552308-72552327 | Msa1074660:CDS | 20.0% |
| !!! | AACAACATTTTCTATGTTTT+AGG | + | chr7_2:72552672-72552691 | Msa1074650:intron | 20.0% |
| !!! | CTTGAAATATTTGTGTATTT+TGG | + | chr7_2:72552764-72552783 | Msa1074650:intron | 20.0% |
| !! | CAAAATACACAAATATTTCA+AGG | - | chr7_2:72552762-72552781 | Msa1074660:CDS | 20.0% |
| !! | AAGACTAAAACTTAAAAAAC+AGG | - | chr7_2:72552831-72552850 | Msa1074660:CDS | 20.0% |
| !! | ATATCTCATTTGTAAAATCA+TGG | - | chr7_2:72553022-72553041 | Msa1074660:intron | 20.0% |
| ! | TATAAACCATTGCTCAAAAA+TGG | - | chr7_2:72550651-72550670 | Msa1074660:three_prime_UTR | 25.0% |
| ! | AACAATCTCAATGAAGAAAA+TGG | - | chr7_2:72550835-72550854 | Msa1074660:CDS | 25.0% |
| ! | ACAATCTCAATGAAGAAAAT+GGG | - | chr7_2:72550836-72550855 | Msa1074660:CDS | 25.0% |
| ! | TTGAACTTAGAATCAAAAGA+AGG | + | chr7_2:72550883-72550902 | Msa1074650:intron | 25.0% |
| !! | TAAGTTCAAATGCTTTTAGT+AGG | - | chr7_2:72550894-72550913 | Msa1074660:CDS | 25.0% |
| !! | AAGTTCAAATGCTTTTAGTA+GGG | - | chr7_2:72550895-72550914 | Msa1074660:CDS | 25.0% |
| ! | CATAAACCTATCACAAATTA+TGG | - | chr7_2:72550956-72550975 | Msa1074660:CDS | 25.0% |
| !! | TTTTAAACAAAAGGTTCAGA+AGG | + | chr7_2:72551223-72551242 | Msa1074650:intron | 25.0% |
| !!! | CCGAAAAAGTTTTAAACAAA+AGG | + | chr7_2:72551232-72551251 | Msa1074650:intron | 25.0% |
| ! | TAAAAGAACAAACATACCAT+TGG | + | chr7_2:72551286-72551305 | Msa1074650:intron | 25.0% |
| !!! | GTTTAATTTGTATACACCTT+CGG | - | chr7_2:72551651-72551670 | Msa1074660:intron | 25.0% |
| ! | AAGCAAAGAAATACAAAATC+AGG | - | chr7_2:72551819-72551838 | Msa1074660:CDS | 25.0% |
| ! | AATCAGGCTAATATTATCAT+TGG | - | chr7_2:72551835-72551854 | Msa1074660:CDS | 25.0% |
| ! | GAGTTGTTTACATTTAAGAA+AGG | + | chr7_2:72552002-72552021 | Msa1074650:intron | 25.0% |
| ! | AAGGAACTAAAACTAAAACA+AGG | - | chr7_2:72552781-72552800 | Msa1074660:CDS | 25.0% |
| ! | ACTAAAACTTAAAAAACAGG+AGG | - | chr7_2:72552834-72552853 | Msa1074660:CDS | 25.0% |
| ! | CTAAAACTTAAAAAACAGGA+GGG | - | chr7_2:72552835-72552854 | Msa1074660:CDS | 25.0% |
| ! | TGTCTACTTAATAATGTGTT+TGG | - | chr7_2:72552898-72552917 | Msa1074660:intron | 25.0% |
| ! | TTGTAAGAAGAAGAAAATGT+TGG | - | chr7_2:72553377-72553396 | Msa1074660:five_prime_UTR | 25.0% |
| !! | TATGTTCCATTTTTGAGCAA+TGG | + | chr7_2:72550660-72550679 | Msa1074650:intron | 30.0% |
| CTGAGTTTGATCAATTTCTA+TGG | - | chr7_2:72550743-72550762 | Msa1074660:three_prime_UTR | 30.0% | |
| CTTCATTGAGATTGTTTACT+TGG | + | chr7_2:72550831-72550850 | Msa1074650:intron | 30.0% | |
| TAGGTTTATGTACATGATCT+TGG | + | chr7_2:72550946-72550965 | Msa1074650:intron | 30.0% | |
| ! | TCATACCCATAATTTGTGAT+AGG | + | chr7_2:72550965-72550984 | Msa1074650:intron | 30.0% |
| AAACCTCGTACAAAAAAAGT+TGG | + | chr7_2:72551033-72551052 | Msa1074650:intron | 30.0% | |
| !!! | GGTTTTTTGTAATGGTGTTA+AGG | - | chr7_2:72551330-72551349 | Msa1074660:intron | 30.0% |
| TGTTAAGGAGTGAAATAATG+TGG | - | chr7_2:72551345-72551364 | Msa1074660:intron | 30.0% | |
| GTTAAGGAGTGAAATAATGT+GGG | - | chr7_2:72551346-72551365 | Msa1074660:intron | 30.0% | |
| ! | TAAATGGATTCAACACATAC+TGG | - | chr7_2:72551444-72551463 | Msa1074660:intron | 30.0% |
| ! | AATGCAAAACTTTTTACCGA+AGG | + | chr7_2:72551670-72551689 | Msa1074650:intron | 30.0% |
| TGATTGATTGTGATGTGATT+TGG | + | chr7_2:72551697-72551716 | Msa1074650:intron | 30.0% | |
| CAAACGTTTGAATTATTCGA+CGG | - | chr7_2:72551751-72551770 | Msa1074660:CDS | 30.0% | |
| TTTGAATTATTCGACGGTTA+TGG | - | chr7_2:72551757-72551776 | Msa1074660:CDS | 30.0% | |
| TATTATCATTGGCCAACAAT+TGG | - | chr7_2:72551846-72551865 | Msa1074660:CDS | 30.0% | |
| ATTATCATTGGCCAACAATT+GGG | - | chr7_2:72551847-72551866 | Msa1074660:CDS | 30.0% | |
| ! | GAAAGCACAATATGTGAAAT+GGG | - | chr7_2:72551883-72551902 | Msa1074660:intron | 30.0% |
| AAAGCACAATATGTGAAATG+GGG | - | chr7_2:72551884-72551903 | Msa1074660:intron | 30.0% | |
| !! | AGCTTTCAAGTAAGCAATTT+TGG | + | chr7_2:72552029-72552048 | Msa1074650:intron | 30.0% |
| TATCCAGTAGAAGTTTACTA+GGG | + | chr7_2:72552226-72552245 | Msa1074650:intron | 30.0% | |
| ATATCCAGTAGAAGTTTACT+AGG | + | chr7_2:72552227-72552246 | Msa1074650:intron | 30.0% | |
| ATAGGATTGGATACAAGAAA+TGG | - | chr7_2:72552321-72552340 | Msa1074660:CDS | 30.0% | |
| ! | TTGGATCAATTTTCTTCACA+TGG | + | chr7_2:72552351-72552370 | Msa1074650:intron | 30.0% |
| !! | ATTGGACTAGAAGGATTTTA+TGG | - | chr7_2:72552385-72552404 | Msa1074660:CDS | 30.0% |
| !! | AAGTTGGAACTGATTTTATC+AGG | - | chr7_2:72552458-72552477 | Msa1074660:intron | 30.0% |
| GTTTATCACATACTAGCAAA+TGG | + | chr7_2:72552562-72552581 | Msa1074650:intron | 30.0% | |
| TTAGGACTAAAACCCAAAAA+AGG | + | chr7_2:72552654-72552673 | Msa1074650:intron | 30.0% | |
| ATTAAGTAGACAAATAGTGC+TGG | + | chr7_2:72552890-72552909 | None:intergenic | 30.0% | |
| ! | AAGTCAATGATCTTGTTTGA+AGG | - | chr7_2:72552974-72552993 | Msa1074660:intron | 30.0% |
| ! | AGTCAATGATCTTGTTTGAA+GGG | - | chr7_2:72552975-72552994 | Msa1074660:intron | 30.0% |
| ATATGTGTATCAGCAATTTG+TGG | + | chr7_2:72553006-72553025 | None:intergenic | 30.0% | |
| CTCATTTGTAAAATCATGGA+TGG | - | chr7_2:72553026-72553045 | Msa1074660:intron | 30.0% | |
| AACATGCTTCTATCTTAAGA+TGG | + | chr7_2:72553510-72553529 | None:intergenic | 30.0% | |
| TACCAGTTATGCATAATTGT+CGG | - | chr7_2:72553554-72553573 | Msa1074660:five_prime_UTR | 30.0% | |
| ! | AACATCACCTTTGTTTCCTA+AGG | + | chr7_2:72550607-72550626 | Msa1074650:intron | 35.0% |
| GCAATGGTTTATACAAGTGA+AGG | + | chr7_2:72550644-72550663 | Msa1074650:intron | 35.0% | |
| ATCAAACTCAGAAGATTAGC+GGG | + | chr7_2:72550734-72550753 | Msa1074650:intron | 35.0% | |
| GATCAAACTCAGAAGATTAG+CGG | + | chr7_2:72550735-72550754 | Msa1074650:intron | 35.0% | |
| ! | TTCAAATGCTTTTAGTAGGG+TGG | - | chr7_2:72550898-72550917 | Msa1074660:CDS | 35.0% |
| ! | ACAAAAAAAGTTGGTCTGGT+TGG | + | chr7_2:72551024-72551043 | Msa1074650:intron | 35.0% |
| ! | TCGTACAAAAAAAGTTGGTC+TGG | + | chr7_2:72551028-72551047 | Msa1074650:intron | 35.0% |
| !!! | AGACCAACTTTTTTTGTACG+AGG | - | chr7_2:72551027-72551046 | Msa1074660:CDS | 35.0% |
| GAAGAAAGGAAACCAATTTG+TGG | - | chr7_2:72551400-72551419 | Msa1074660:intron | 35.0% | |
| GGTCAGCCTTTCTATATAAA+TGG | - | chr7_2:72551428-72551447 | Msa1074660:intron | 35.0% | |
| TATGACAGTTTGTCGAACTT+GGG | - | chr7_2:72551541-72551560 | Msa1074660:intron | 35.0% | |
| TTATGACGAAGAAGTCTTCA+AGG | - | chr7_2:72551610-72551629 | Msa1074660:intron | 35.0% | |
| TATGGTTATGATTGATCTGC+AGG | - | chr7_2:72551775-72551794 | Msa1074660:CDS | 35.0% | |
| ! | GGAAAGCACAATATGTGAAA+TGG | - | chr7_2:72551882-72551901 | Msa1074660:intron | 35.0% |
| AAAGGAACTTGCCTTAACAT+GGG | + | chr7_2:72551984-72552003 | Msa1074650:intron | 35.0% | |
| TGCTTACTTGAAAGCTTGAT+TGG | - | chr7_2:72552033-72552052 | Msa1074660:CDS | 35.0% | |
| !! | AAGATCCTACCATTTTTGCT+TGG | - | chr7_2:72552140-72552159 | Msa1074660:intron | 35.0% |
| !! | AGATCCTACCATTTTTGCTT+GGG | - | chr7_2:72552141-72552160 | Msa1074660:intron | 35.0% |
| ATCCAGTAGAAGTTTACTAG+GGG | + | chr7_2:72552225-72552244 | Msa1074650:intron | 35.0% | |
| AGTGCAACTACATGATATCA+TGG | + | chr7_2:72552272-72552291 | Msa1074650:intron | 35.0% | |
| AATTGATCCAAAACACCTAG+TGG | - | chr7_2:72552360-72552379 | Msa1074660:CDS | 35.0% | |
| ! | ACTTGTTGAGCATATGCATT+TGG | + | chr7_2:72552442-72552461 | Msa1074650:intron | 35.0% |
| AATGCATATGCTCAACAAGT+TGG | - | chr7_2:72552442-72552461 | Msa1074660:intron | 35.0% | |
| ACCCAAAAAAGGAAGAATGA+GGG | + | chr7_2:72552643-72552662 | Msa1074650:intron | 35.0% | |
| AACCCAAAAAAGGAAGAATG+AGG | + | chr7_2:72552644-72552663 | Msa1074650:intron | 35.0% | |
| GAATCAGTTGCTGTAATATG+TGG | + | chr7_2:72552742-72552761 | Msa1074650:intron | 35.0% | |
| GTTGCACTATTCATGTCAAA+AGG | + | chr7_2:72552943-72552962 | None:intergenic | 35.0% | |
| CCAAACTCAGAAAAAACAAC+TGG | + | chr7_2:72553090-72553109 | None:intergenic | 35.0% | |
| !!! | CCAGTTGTTTTTTCTGAGTT+TGG | - | chr7_2:72553087-72553106 | Msa1074660:intron | 35.0% |
| ATCCTAAACTCCACAAAGAA+AGG | - | chr7_2:72553180-72553199 | Msa1074660:intron | 35.0% | |
| TAAACTCCACAAAGAAAGGA+GGG | - | chr7_2:72553184-72553203 | Msa1074660:intron | 35.0% | |
| GTTACAATACTTGAAGTGGA+AGG | + | chr7_2:72553297-72553316 | None:intergenic | 35.0% | |
| AAGGGTTACAATACTTGAAG+TGG | + | chr7_2:72553301-72553320 | None:intergenic | 35.0% | |
| ! | TATGGCTATAGCTTTACAGT+GGG | + | chr7_2:72553446-72553465 | None:intergenic | 35.0% |
| ! | ATATGGCTATAGCTTTACAG+TGG | + | chr7_2:72553447-72553466 | None:intergenic | 35.0% |
| !!! | TCAACGTGCATGGTTTTATA+TGG | + | chr7_2:72553464-72553483 | None:intergenic | 35.0% |
| TTCCGACAATTATGCATAAC+TGG | + | chr7_2:72553559-72553578 | None:intergenic | 35.0% | |
| ! | TTCCTAAGGCACTTTCATGT+GGG | + | chr7_2:72550593-72550612 | Msa1074650:intron | 40.0% |
| ! | TTTCCTAAGGCACTTTCATG+TGG | + | chr7_2:72550594-72550613 | Msa1074650:intron | 40.0% |
| !! | GAAAGTGCCTTAGGAAACAA+AGG | - | chr7_2:72550597-72550616 | Msa1074660:three_prime_UTR | 40.0% |
| TAACATGCCCTAATAGAGCA+TGG | - | chr7_2:72550796-72550815 | Msa1074660:CDS | 40.0% | |
| ACATTGGCCATGCTCTATTA+GGG | + | chr7_2:72550806-72550825 | Msa1074650:intron | 40.0% | |
| GATTGTTTACTTGGCCACAT+TGG | + | chr7_2:72550822-72550841 | Msa1074650:intron | 40.0% | |
| ! | TTTTAGTAGGGTGGATGAAG+AGG | - | chr7_2:72550907-72550926 | Msa1074660:CDS | 40.0% |
| !!! | TTTTTCGGTGTCGTTTAGCT+CGG | - | chr7_2:72551244-72551263 | Msa1074660:intron | 40.0% |
| AACAAACATACCATTGGCCA+CGG | + | chr7_2:72551280-72551299 | Msa1074650:intron | 40.0% | |
| GAGTGAAATAATGTGGGACA+TGG | - | chr7_2:72551352-72551371 | Msa1074660:intron | 40.0% | |
| AATAATGTGGGACATGGAAG+AGG | - | chr7_2:72551358-72551377 | Msa1074660:intron | 40.0% | |
| AGGATGAATGGCAAATGGTA+GGG | - | chr7_2:72551378-72551397 | Msa1074660:intron | 40.0% | |
| GGAAACCAATTTGTGGTGAA+TGG | - | chr7_2:72551407-72551426 | Msa1074660:intron | 40.0% | |
| TTCAAACAAGCATCCTCACT+AGG | - | chr7_2:72551518-72551537 | Msa1074660:intron | 40.0% | |
| ACAAACTGTCATACCTAGTG+AGG | + | chr7_2:72551534-72551553 | Msa1074650:intron | 40.0% | |
| GTATGACAGTTTGTCGAACT+TGG | - | chr7_2:72551540-72551559 | Msa1074660:intron | 40.0% | |
| TTCTTCGTCATAAACCGAAG+GGG | + | chr7_2:72551603-72551622 | Msa1074650:intron | 40.0% | |
| CTTCTTCGTCATAAACCGAA+GGG | + | chr7_2:72551604-72551623 | Msa1074650:intron | 40.0% | |
| ACTTCTTCGTCATAAACCGA+AGG | + | chr7_2:72551605-72551624 | Msa1074650:intron | 40.0% | |
| TTCACTTACCACAAAGTCCA+AGG | + | chr7_2:72551801-72551820 | Msa1074650:intron | 40.0% | |
| CATCATCAGAGGTCAAGTTA+AGG | + | chr7_2:72551922-72551941 | Msa1074650:intron | 40.0% | |
| TGAGTAGAAGTCATCATCAG+AGG | + | chr7_2:72551933-72551952 | Msa1074650:intron | 40.0% | |
| GGACTTGTAGTAGCTTCTAA+GGG | + | chr7_2:72551963-72551982 | Msa1074650:intron | 40.0% | |
| CTACTACAAGTCCCATGTTA+AGG | - | chr7_2:72551970-72551989 | Msa1074660:intron | 40.0% | |
| GAAAGGAACTTGCCTTAACA+TGG | + | chr7_2:72551985-72552004 | Msa1074650:intron | 40.0% | |
| AGTTCCCAAGCAAAAATGGT+AGG | + | chr7_2:72552148-72552167 | Msa1074650:intron | 40.0% | |
| CATCAGTTCCCAAGCAAAAA+TGG | + | chr7_2:72552152-72552171 | Msa1074650:intron | 40.0% | |
| !! | GAAGTCTTTGAGGTGTTGAA+GGG | + | chr7_2:72552411-72552430 | Msa1074650:intron | 40.0% |
| !! | TGAAGTCTTTGAGGTGTTGA+AGG | + | chr7_2:72552412-72552431 | Msa1074650:intron | 40.0% |
| GGATTGAACTGAAGTCTTTG+AGG | + | chr7_2:72552421-72552440 | Msa1074650:intron | 40.0% | |
| ATCAGGAACCATCAAGTTCT+TGG | - | chr7_2:72552475-72552494 | Msa1074660:intron | 40.0% | |
| AGTCTACACCAAGAACTTGA+TGG | + | chr7_2:72552486-72552505 | Msa1074650:intron | 40.0% | |
| !! | TTCACATGTATGCTGACTCA+TGG | - | chr7_2:72552515-72552534 | Msa1074660:intron | 40.0% |
| CCCAAAAAAGGAAGAATGAG+GGG | + | chr7_2:72552642-72552661 | Msa1074650:intron | 40.0% | |
| !!! | CCCCTCATTCTTCCTTTTTT+GGG | - | chr7_2:72552639-72552658 | Msa1074660:CDS | 40.0% |
| !! | GAGGATGCTGAAAAGTATCT+TGG | - | chr7_2:72553060-72553079 | Msa1074660:intron | 40.0% |
| !! | TGAGTTTGGTGTATCATCCA+AGG | - | chr7_2:72553101-72553120 | Msa1074660:intron | 40.0% |
| ! | CTATATGTTGAGTTGTAGCC+AGG | + | chr7_2:72553129-72553148 | None:intergenic | 40.0% |
| CTCCTTTCTTTGTGGAGTTT+AGG | + | chr7_2:72553185-72553204 | None:intergenic | 40.0% | |
| CTAAACTCCACAAAGAAAGG+AGG | - | chr7_2:72553183-72553202 | Msa1074660:intron | 40.0% | |
| TCCTGAAGGAACGGATAATA+TGG | - | chr7_2:72553239-72553258 | Msa1074660:CDS | 40.0% | |
| TCCATATTATCCGTTCCTTC+AGG | + | chr7_2:72553243-72553262 | None:intergenic | 40.0% | |
| GGAACGGATAATATGGATGA+CGG | - | chr7_2:72553246-72553265 | Msa1074660:CDS | 40.0% | |
| ATTGCATCTGGTAGAACACA+AGG | + | chr7_2:72553352-72553371 | None:intergenic | 40.0% | |
| TGTGTTCTACCAGATGCAAT+TGG | - | chr7_2:72553352-72553371 | Msa1074660:exon | 40.0% | |
| CTTACAACTCCAATTGCATC+TGG | + | chr7_2:72553364-72553383 | None:intergenic | 40.0% | |
| CTACACAAATTCAACGTGCA+TGG | + | chr7_2:72553474-72553493 | None:intergenic | 40.0% | |
| !! | AACCCACATGAAAGTGCCTT+AGG | - | chr7_2:72550588-72550607 | Msa1074660:three_prime_UTR | 45.0% |
| CACATTGGCCATGCTCTATT+AGG | + | chr7_2:72550807-72550826 | Msa1074650:intron | 45.0% | |
| CTAATAGAGCATGGCCAATG+TGG | - | chr7_2:72550805-72550824 | Msa1074660:CDS | 45.0% | |
| ! | GATGAAGAGGCACAAAAGGA+AGG | - | chr7_2:72550920-72550939 | Msa1074660:CDS | 45.0% |
| GGAAGAGGATGAATGGCAAA+TGG | - | chr7_2:72551373-72551392 | Msa1074660:intron | 45.0% | |
| GAGGATGAATGGCAAATGGT+AGG | - | chr7_2:72551377-72551396 | Msa1074660:intron | 45.0% | |
| TGGCAAATGGTAGGGAAGAA+AGG | - | chr7_2:72551386-72551405 | Msa1074660:intron | 45.0% | |
| GCTGACCATTCACCACAAAT+TGG | + | chr7_2:72551415-72551434 | Msa1074650:intron | 45.0% | |
| ! | AACCTCAGTGACTTTTCCTC+TGG | + | chr7_2:72551498-72551517 | Msa1074650:intron | 45.0% |
| CGAACTTGGGCTTTCAATGA+TGG | - | chr7_2:72551554-72551573 | Msa1074660:intron | 45.0% | |
| AACCGAAGGGGATTTCTGTA+GGG | + | chr7_2:72551591-72551610 | Msa1074650:intron | 45.0% | |
| AAACCGAAGGGGATTTCTGT+AGG | + | chr7_2:72551592-72551611 | Msa1074650:intron | 45.0% | |
| TATGATTGATCTGCAGGCCT+TGG | - | chr7_2:72551781-72551800 | Msa1074660:CDS | 45.0% | |
| ATCATTGGCCAACAATTGGG+AGG | - | chr7_2:72551850-72551869 | Msa1074660:CDS | 45.0% | |
| ACCATATGCCTCCCAATTGT+TGG | + | chr7_2:72551861-72551880 | Msa1074650:intron | 45.0% | |
| ! | AACAATTGGGAGGCATATGG+TGG | - | chr7_2:72551860-72551879 | Msa1074660:CDS | 45.0% |
| ! | ACAATTGGGAGGCATATGGT+GGG | - | chr7_2:72551861-72551880 | Msa1074660:CDS | 45.0% |
| GGGACTTGTAGTAGCTTCTA+AGG | + | chr7_2:72551964-72551983 | Msa1074650:intron | 45.0% | |
| ! | ACCTGTAACTTGTCACCTGT+GGG | + | chr7_2:72552199-72552218 | Msa1074650:intron | 45.0% |
| ! | AACCTGTAACTTGTCACCTG+TGG | + | chr7_2:72552200-72552219 | Msa1074650:intron | 45.0% |
| TGCCCCTAGTAAACTTCTAC+TGG | - | chr7_2:72552220-72552239 | Msa1074660:intron | 45.0% | |
| ! | CCAATCTCCACTAGGTGTTT+TGG | + | chr7_2:72552370-72552389 | Msa1074650:intron | 45.0% |
| CCAAAACACCTAGTGGAGAT+TGG | - | chr7_2:72552367-72552386 | Msa1074660:CDS | 45.0% | |
| CTTCTAGTCCAATCTCCACT+AGG | + | chr7_2:72552378-72552397 | Msa1074650:intron | 45.0% | |
| ! | CTAGTGGAGATTGGACTAGA+AGG | - | chr7_2:72552376-72552395 | Msa1074660:CDS | 45.0% |
| !!! | GCCCCTCATTCTTCCTTTTT+TGG | - | chr7_2:72552638-72552657 | Msa1074660:CDS | 45.0% |
| ATGGATGGATGCACACATAG+AGG | - | chr7_2:72553041-72553060 | Msa1074660:intron | 45.0% | |
| CAGGAAATACCTGCCACAAA+AGG | + | chr7_2:72553224-72553243 | None:intergenic | 45.0% | |
| TTGTGGCAGGTATTTCCTGA+AGG | - | chr7_2:72553225-72553244 | Msa1074660:intron | 45.0% | |
| GCAGGTATTTCCTGAAGGAA+CGG | - | chr7_2:72553230-72553249 | Msa1074660:intron | 45.0% | |
| TTGTAACCCTTCAATCCACG+AGG | - | chr7_2:72553310-72553329 | Msa1074660:CDS | 45.0% | |
| !!! | ATTTTTCATTATTTTTAAAT+TGG | - | chr7_2:72551081-72551100 | Msa1074660:CDS | 5.0% |
| !!! | TTATTTATTTTTTAACATTT+TGG | - | chr7_2:72552587-72552606 | Msa1074660:CDS | 5.0% |
| ! | GGTGGATGAAGAGGCACAAA+AGG | - | chr7_2:72550916-72550935 | Msa1074660:CDS | 50.0% |
| !! | GTGTCGTTTAGCTCGGTGTT+CGG | - | chr7_2:72551251-72551270 | Msa1074660:intron | 50.0% |
| GGGACATGGAAGAGGATGAA+TGG | - | chr7_2:72551366-72551385 | Msa1074660:intron | 50.0% | |
| ! | CTCAGTGACTTTTCCTCTGG+TGG | + | chr7_2:72551495-72551514 | Msa1074650:intron | 50.0% |
| CACCAGAGGAAAAGTCACTG+AGG | - | chr7_2:72551493-72551512 | Msa1074660:intron | 50.0% | |
| TGGGCTTTCAATGATGGCCA+AGG | - | chr7_2:72551560-72551579 | Msa1074660:intron | 50.0% | |
| GGGCTTTCAATGATGGCCAA+GGG | - | chr7_2:72551561-72551580 | Msa1074660:intron | 50.0% | |
| CTTTCAATGATGGCCAAGGG+CGG | - | chr7_2:72551564-72551583 | Msa1074660:intron | 50.0% | |
| TTTCAATGATGGCCAAGGGC+GGG | - | chr7_2:72551565-72551584 | Msa1074660:intron | 50.0% | |
| ! | GCCAACAATTGGGAGGCATA+TGG | - | chr7_2:72551857-72551876 | Msa1074660:CDS | 50.0% |
| GTGAAATGGGGCAAAGATGC+TGG | - | chr7_2:72551896-72551915 | Msa1074660:intron | 50.0% | |
| GTGGGATCAGAGTTGCATCT+AGG | + | chr7_2:72552181-72552200 | Msa1074650:intron | 50.0% | |
| AGATGCAACTCTGATCCCAC+AGG | - | chr7_2:72552181-72552200 | Msa1074660:intron | 50.0% | |
| TCCCACAGGTGACAAGTTAC+AGG | - | chr7_2:72552195-72552214 | Msa1074660:intron | 50.0% | |
| GGTGTATCATCCAAGGATCC+TGG | - | chr7_2:72553108-72553127 | Msa1074660:intron | 50.0% | |
| TGAGTTGTAGCCAGGATCCT+TGG | + | chr7_2:72553121-72553140 | None:intergenic | 50.0% | |
| TCCACAAAGAAAGGAGGGAG+TGG | - | chr7_2:72553189-72553208 | Msa1074660:intron | 50.0% | |
| TCCACTCCCTCCTTTCTTTG+TGG | + | chr7_2:72553193-72553212 | None:intergenic | 50.0% | |
| ! | AGCAAGCCTCGTGGATTGAA+GGG | + | chr7_2:72553319-72553338 | None:intergenic | 50.0% |
| ! | AAGCAAGCCTCGTGGATTGA+AGG | + | chr7_2:72553320-72553339 | None:intergenic | 50.0% |
| GTTGAACAAAGCAAGCCTCG+TGG | + | chr7_2:72553328-72553347 | None:intergenic | 50.0% | |
| TGTTCGGTAACCGTGGCCAA+TGG | - | chr7_2:72551267-72551286 | Msa1074660:intron | 55.0% | |
| GCTGCAGATAACTCCACCAG+AGG | - | chr7_2:72551479-72551498 | Msa1074660:intron | 55.0% | |
| GGCCCTACAGAAATCCCCTT+CGG | - | chr7_2:72551586-72551605 | Msa1074660:intron | 55.0% | |
| TCTGCAGGCCTTGGACTTTG+TGG | - | chr7_2:72551790-72551809 | Msa1074660:CDS | 55.0% | |
| AAGAAAGGAGGGAGTGGAGC+TGG | - | chr7_2:72553195-72553214 | Msa1074660:intron | 55.0% | |
| ! | GTGGAGCTGGAAGCCTTTTG+TGG | - | chr7_2:72553208-72553227 | Msa1074660:intron | 55.0% |
| ! | AGCTGGAAGCCTTTTGTGGC+AGG | - | chr7_2:72553212-72553231 | Msa1074660:intron | 55.0% |
| !! | AGCTCGGTGTTCGGTAACCG+TGG | - | chr7_2:72551260-72551279 | Msa1074660:intron | 60.0% |
| ATTTCTGTAGGGCCCGCCCT+TGG | + | chr7_2:72551580-72551599 | Msa1074650:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 72550583 | 72553631 | 72550583 | ID=Msa1074660;Name=Msa1074660 |
| chr7_2 | mRNA | 72550583 | 72553631 | 72550583 | ID=Msa1074660-mRNA-1;Parent=Msa1074660;Name=Msa1074660-mRNA-1;_AED=0.19;_eAED=0.19;_QI=262|1|1|1|0.8|0.83|6|203|458 |
| chr7_2 | exon | 72550583 | 72551218 | 72550583 | ID=Msa1074660-mRNA-1:exon:16753;Parent=Msa1074660-mRNA-1 |
| chr7_2 | exon | 72551678 | 72551889 | 72551678 | ID=Msa1074660-mRNA-1:exon:16752;Parent=Msa1074660-mRNA-1 |
| chr7_2 | exon | 72551998 | 72552120 | 72551998 | ID=Msa1074660-mRNA-1:exon:16751;Parent=Msa1074660-mRNA-1 |
| chr7_2 | exon | 72552223 | 72552417 | 72552223 | ID=Msa1074660-mRNA-1:exon:16750;Parent=Msa1074660-mRNA-1 |
| chr7_2 | exon | 72552583 | 72552862 | 72552583 | ID=Msa1074660-mRNA-1:exon:16749;Parent=Msa1074660-mRNA-1 |
| chr7_2 | exon | 72553236 | 72553631 | 72553236 | ID=Msa1074660-mRNA-1:exon:16748;Parent=Msa1074660-mRNA-1 |
| chr7_2 | five_prime_UTR | 72553370 | 72553631 | 72553370 | ID=Msa1074660-mRNA-1:five_prime_utr;Parent=Msa1074660-mRNA-1 |
| chr7_2 | CDS | 72553236 | 72553369 | 72553236 | ID=Msa1074660-mRNA-1:cds;Parent=Msa1074660-mRNA-1 |
| chr7_2 | CDS | 72552583 | 72552862 | 72552583 | ID=Msa1074660-mRNA-1:cds;Parent=Msa1074660-mRNA-1 |
| chr7_2 | CDS | 72552223 | 72552417 | 72552223 | ID=Msa1074660-mRNA-1:cds;Parent=Msa1074660-mRNA-1 |
| chr7_2 | CDS | 72551998 | 72552120 | 72551998 | ID=Msa1074660-mRNA-1:cds;Parent=Msa1074660-mRNA-1 |
| chr7_2 | CDS | 72551678 | 72551889 | 72551678 | ID=Msa1074660-mRNA-1:cds;Parent=Msa1074660-mRNA-1 |
| chr7_2 | CDS | 72550786 | 72551218 | 72550786 | ID=Msa1074660-mRNA-1:cds;Parent=Msa1074660-mRNA-1 |
| chr7_2 | three_prime_UTR | 72550583 | 72550785 | 72550583 | ID=Msa1074660-mRNA-1:three_prime_utr;Parent=Msa1074660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
