Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111690 | XP_039683647.1 | 97.380 | 458 | 12 | 0 | 1 | 458 | 1 | 458 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111690 | sp|Q9LZV3|MAN6_ARATH | 66.087 | 460 | 137 | 4 | 3 | 458 | 4 | 448 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111690 | A0A396H2J1 | 97.380 | 458 | 12 | 0 | 1 | 458 | 1 | 458 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074640 | Msa1111690 | 0.832125 | 1.130147e-55 | -8.615850e-47 |
| Msa1074660 | Msa1111690 | 0.828399 | 9.188178e-55 | -8.615850e-47 |
| Msa1111690 | Msa1154150 | 0.844449 | 7.507204e-59 | -8.615850e-47 |
| Msa1111690 | Msa1364630 | 0.887849 | 9.941545e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111690 | MtrunA17_Chr7g0245051 | 97.380 | 458 | 12 | 0 | 1 | 458 | 1 | 458 | 0.0 | 939 |
| Msa1111690 | MtrunA17_Chr7g0245101 | 94.553 | 459 | 24 | 1 | 1 | 458 | 1 | 459 | 0.0 | 887 |
| Msa1111690 | MtrunA17_Chr8g0334501 | 78.414 | 454 | 88 | 3 | 8 | 457 | 13 | 460 | 0.0 | 744 |
| Msa1111690 | MtrunA17_Chr4g0020521 | 48.813 | 379 | 191 | 1 | 60 | 438 | 35 | 410 | 4.18e-145 | 421 |
| Msa1111690 | MtrunA17_Chr5g0404601 | 51.697 | 383 | 182 | 2 | 59 | 440 | 31 | 411 | 4.51e-144 | 419 |
| Msa1111690 | MtrunA17_Chr1g0193531 | 52.022 | 371 | 175 | 2 | 59 | 429 | 29 | 396 | 4.22e-143 | 415 |
| Msa1111690 | MtrunA17_Chr1g0193611 | 49.865 | 371 | 184 | 1 | 59 | 429 | 32 | 400 | 1.08e-141 | 411 |
| Msa1111690 | MtrunA17_Chr1g0193551 | 51.475 | 373 | 173 | 5 | 59 | 429 | 35 | 401 | 7.20e-137 | 399 |
| Msa1111690 | MtrunA17_Chr7g0271511 | 50.135 | 371 | 179 | 2 | 59 | 429 | 62 | 426 | 8.94e-137 | 400 |
| Msa1111690 | MtrunA17_Chr1g0193601 | 49.326 | 371 | 186 | 1 | 59 | 429 | 32 | 400 | 2.04e-136 | 398 |
| Msa1111690 | MtrunA17_Chr3g0141751 | 47.906 | 382 | 190 | 4 | 49 | 428 | 17 | 391 | 2.18e-135 | 395 |
| Msa1111690 | MtrunA17_Chr4g0040121 | 48.469 | 392 | 199 | 3 | 43 | 432 | 24 | 414 | 7.22e-135 | 395 |
| Msa1111690 | MtrunA17_Chr2g0324441 | 46.579 | 380 | 200 | 2 | 53 | 429 | 34 | 413 | 5.03e-129 | 380 |
| Msa1111690 | MtrunA17_Chr1g0193541 | 45.699 | 372 | 163 | 4 | 60 | 429 | 32 | 366 | 4.10e-114 | 341 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111690 | AT5G01930.1 | 66.087 | 460 | 137 | 4 | 3 | 458 | 4 | 448 | 0.0 | 659 |
| Msa1111690 | AT5G66460.1 | 50.000 | 382 | 188 | 1 | 59 | 440 | 31 | 409 | 9.59e-141 | 410 |
| Msa1111690 | AT3G10890.1 | 47.059 | 374 | 196 | 2 | 59 | 431 | 31 | 403 | 5.55e-135 | 395 |
| Msa1111690 | AT3G10900.1 | 48.533 | 375 | 190 | 3 | 59 | 431 | 29 | 402 | 2.71e-133 | 390 |
| Msa1111690 | AT4G28320.1 | 46.410 | 390 | 199 | 2 | 59 | 438 | 41 | 430 | 8.72e-131 | 385 |
| Msa1111690 | AT2G20680.1 | 47.480 | 377 | 197 | 1 | 54 | 429 | 37 | 413 | 2.37e-130 | 384 |
| Msa1111690 | AT1G02310.1 | 47.733 | 375 | 185 | 6 | 59 | 428 | 29 | 397 | 5.93e-124 | 367 |
| Msa1111690 | AT1G02310.2 | 47.733 | 375 | 185 | 6 | 59 | 428 | 49 | 417 | 8.04e-124 | 367 |
| Msa1111690 | AT3G30540.1 | 42.687 | 335 | 153 | 3 | 59 | 392 | 29 | 325 | 1.97e-94 | 288 |
Find 139 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAGCCTATCACAAATTA+TGG | 0.152029 | 7_3:-57420743 | Msa1111690:CDS |
| CACATTGGCCATGCTCTATT+AGG | 0.195101 | 7_3:+57420895 | None:intergenic |
| AACAATCTCAATGAAGAAAA+TGG | 0.201437 | 7_3:-57420864 | Msa1111690:exon |
| GGTCAGCCTTTCTATATAAA+TGG | 0.201660 | 7_3:-57420271 | Msa1111690:CDS |
| CTCCTTTCTTTGTGGAGTTT+AGG | 0.259533 | 7_3:+57418525 | None:intergenic |
| CTTCATTGAGATTGTTTACT+TGG | 0.269540 | 7_3:+57420871 | None:intergenic |
| CTGAGTTTGATCAATTTCTA+TGG | 0.277481 | 7_3:-57420956 | Msa1111690:five_prime_UTR |
| CCAATCTCCACTAGGTGTTT+TGG | 0.280198 | 7_3:+57419337 | None:intergenic |
| GGGACTTGTAGTAGCTTCTA+AGG | 0.281768 | 7_3:+57419743 | None:intergenic |
| ATCAGGAACCATCAAGTTCT+TGG | 0.295987 | 7_3:-57419229 | Msa1111690:CDS |
| GCTGACCATTCACCACAAAT+TGG | 0.318298 | 7_3:+57420287 | None:intergenic |
| TCCTGAAGGAACGGATAATA+TGG | 0.326511 | 7_3:-57418468 | Msa1111690:CDS |
| TTCCGACAATTATGCATAAC+TGG | 0.327327 | 7_3:+57418150 | None:intergenic |
| TCCACTCCCTCCTTTCTTTG+TGG | 0.336362 | 7_3:+57418517 | None:intergenic |
| TCCCACAGGTGACAAGTTAC+AGG | 0.338503 | 7_3:-57419509 | Msa1111690:intron |
| ATTCACAAATATCACTTATA+AGG | 0.352293 | 7_3:-57419587 | Msa1111690:CDS |
| TATTATCATTGGCCAACAAT+TGG | 0.364268 | 7_3:-57419858 | Msa1111690:CDS |
| TCCATATTATCCGTTCCTTC+AGG | 0.368709 | 7_3:+57418467 | None:intergenic |
| AAGCAAAGAAATACAAAATC+AGG | 0.373174 | 7_3:-57419885 | Msa1111690:CDS |
| ACTTGTTGAGCATATGCATT+TGG | 0.373847 | 7_3:+57419265 | None:intergenic |
| TCATACCCATAATTTGTGAT+AGG | 0.374453 | 7_3:+57420737 | None:intergenic |
| GAAAAGCACAATATGTGAAA+TGG | 0.397390 | 7_3:-57419822 | Msa1111690:CDS |
| AAAAGCACAATATGTGAAAT+GGG | 0.398182 | 7_3:-57419821 | Msa1111690:CDS |
| ACATTGGCCATGCTCTATTA+GGG | 0.409711 | 7_3:+57420896 | None:intergenic |
| TGGCAAATGGTGGGGAAGAA+AGG | 0.412227 | 7_3:-57420313 | Msa1111690:CDS |
| ACCATAGGCCTCCCAATTGT+TGG | 0.419248 | 7_3:+57419846 | None:intergenic |
| TTGAATCCATTTATATAGAA+AGG | 0.422648 | 7_3:+57420265 | None:intergenic |
| CTTACAACTCCAATTGCATC+TGG | 0.426201 | 7_3:+57418346 | None:intergenic |
| GTATGACAGTTTGTAGGACT+TGG | 0.436053 | 7_3:-57420159 | Msa1111690:CDS |
| TGAAGTCTTTGAGGTGTTGA+AGG | 0.436348 | 7_3:+57419295 | None:intergenic |
| AAGAAAGGAGGGAGTGGAGC+TGG | 0.438177 | 7_3:-57418512 | Msa1111690:CDS |
| ATTTCTGTAGGGCCCGCCCT+TGG | 0.439191 | 7_3:+57420122 | None:intergenic |
| ATTATCATTGGCCAACAATT+GGG | 0.439398 | 7_3:-57419857 | Msa1111690:CDS |
| CCAAAACACCTAGTGGAGAT+TGG | 0.439901 | 7_3:-57419337 | Msa1111690:CDS |
| AGGACTTGGGCTTTCAATGA+TGG | 0.444314 | 7_3:-57420145 | Msa1111690:CDS |
| GAGGATGCTGAAAAGTATCT+TGG | 0.444822 | 7_3:-57418647 | Msa1111690:CDS |
| AATCAGGCTGATATTATCAT+TGG | 0.445376 | 7_3:-57419869 | Msa1111690:CDS |
| TACCAGTTATGCATAATTGT+CGG | 0.445652 | 7_3:-57418152 | Msa1111690:three_prime_UTR |
| TAAATGGATTCAACACATAC+TGG | 0.447247 | 7_3:-57420255 | Msa1111690:CDS |
| ATAAGCCTATCACAAATTAT+GGG | 0.453849 | 7_3:-57420742 | Msa1111690:intron |
| AACATCACCTTTGTTTCCTA+AGG | 0.456186 | 7_3:+57421095 | None:intergenic |
| ACAATCTCAATGAAGAAAAT+GGG | 0.457879 | 7_3:-57420863 | Msa1111690:exon |
| TATGCAGGCCTTGGACTTTG+TGG | 0.465022 | 7_3:-57419914 | Msa1111690:intron |
| TTTCAATGATGGCCAAGGGC+GGG | 0.467261 | 7_3:-57420134 | Msa1111690:CDS |
| CTATATGTTGAGTTGTAGCC+AGG | 0.468183 | 7_3:+57418581 | None:intergenic |
| ATCCTAAACTCCACAAAGAA+AGG | 0.469378 | 7_3:-57418527 | Msa1111690:CDS |
| ATATCTCATTTGTAAAATCA+TGG | 0.469699 | 7_3:-57418685 | Msa1111690:CDS |
| TGTGTTCTACCAGATGCAAT+TGG | 0.470041 | 7_3:-57418355 | Msa1111690:CDS |
| CTACTACAAGTCCCATGTTA+AGG | 0.470098 | 7_3:-57419734 | Msa1111690:intron |
| GGAAACCAATTTGTGGTGAA+TGG | 0.470394 | 7_3:-57420292 | Msa1111690:CDS |
| ACATGCTTTCTATCTTAAGA+TGG | 0.474372 | 7_3:+57418200 | None:intergenic |
| ATAGGATTGGATACAAGAAA+TGG | 0.474517 | 7_3:-57419383 | Msa1111690:intron |
| GAGGATGAATGGCAAATGGT+GGG | 0.474776 | 7_3:-57420322 | Msa1111690:CDS |
| CTAGTGGAGATTGGACTAGA+AGG | 0.477254 | 7_3:-57419328 | Msa1111690:CDS |
| CAGGAAATACCTGCCACAAA+AGG | 0.479541 | 7_3:+57418486 | None:intergenic |
| TAGGCTTATGTAGATGATCT+TGG | 0.489098 | 7_3:+57420756 | None:intergenic |
| GAAAGGAACTTGCCTTAACA+TGG | 0.491232 | 7_3:+57419722 | None:intergenic |
| GGATTGAACTGAAGTCTTTG+AGG | 0.494417 | 7_3:+57419286 | None:intergenic |
| GGCCCTACAGAAATCCCCTT+CGG | 0.495084 | 7_3:-57420113 | Msa1111690:CDS |
| AGTCTACACCAAGAACTTGA+TGG | 0.497184 | 7_3:+57419221 | None:intergenic |
| AGAGGATGAATGGCAAATGG+TGG | 0.500090 | 7_3:-57420323 | Msa1111690:CDS |
| GGTGGATGAAGAGGCACAAA+AGG | 0.507529 | 7_3:-57420783 | Msa1111690:CDS |
| TGGGCTTTCAATGATGGCCA+AGG | 0.508036 | 7_3:-57420139 | Msa1111690:CDS |
| GTGGGATCAGAGTTGCATCT+AGG | 0.510907 | 7_3:+57419526 | None:intergenic |
| CTTTCAATGATGGCCAAGGG+CGG | 0.511432 | 7_3:-57420135 | Msa1111690:CDS |
| AAGGGTTACAATACTTGAAG+TGG | 0.512139 | 7_3:+57418409 | None:intergenic |
| CTCATTTGTAAAATCATGGA+TGG | 0.524777 | 7_3:-57418681 | Msa1111690:CDS |
| AAGCAAGCCTCGTGGATTGA+AGG | 0.524825 | 7_3:+57418390 | None:intergenic |
| AATGCATATGCTCAACAAGT+TGG | 0.524998 | 7_3:-57419262 | Msa1111690:CDS |
| GGTGTATCATCCAAGGATCC+TGG | 0.525677 | 7_3:-57418599 | Msa1111690:CDS |
| TGAGTTTGGTGTATCATCCA+AGG | 0.526819 | 7_3:-57418606 | Msa1111690:CDS |
| TTTCCTAAGGCACTTTCAAG+TGG | 0.527165 | 7_3:+57421108 | None:intergenic |
| TGAGTTGTAGCCAGGATCCT+TGG | 0.527284 | 7_3:+57418589 | None:intergenic |
| GTGAAATGGGGCAAAGATGC+TGG | 0.528082 | 7_3:-57419808 | Msa1111690:CDS |
| AAACCGAAGGGGATTTCTGT+AGG | 0.529426 | 7_3:+57420110 | None:intergenic |
| TATGACAGTTTGTAGGACTT+GGG | 0.530156 | 7_3:-57420158 | Msa1111690:CDS |
| GCCAACAATTGGGAGGCCTA+TGG | 0.530720 | 7_3:-57419847 | Msa1111690:CDS |
| CACTAGGTATGACAGTTTGT+AGG | 0.531521 | 7_3:-57420165 | Msa1111690:CDS |
| TTGTAAGAAGAAGAAAATGT+TGG | 0.531641 | 7_3:-57418330 | Msa1111690:CDS |
| TTATGATGAAGAAGTCTTCA+AGG | 0.537891 | 7_3:-57420089 | Msa1111690:intron |
| TCCACAAAGAAAGGAGGGAG+TGG | 0.538406 | 7_3:-57418518 | Msa1111690:CDS |
| AACCCACTTGAAAGTGCCTT+AGG | 0.539907 | 7_3:-57421111 | Msa1111690:five_prime_UTR |
| CATCATCAGAGGTCAAGTTA+AGG | 0.540046 | 7_3:+57419785 | None:intergenic |
| ATCAAACTCAGAAGATTAGC+GGG | 0.541385 | 7_3:+57420968 | None:intergenic |
| TTCCTAAGGCACTTTCAAGT+GGG | 0.542936 | 7_3:+57421109 | None:intergenic |
| GAAGAAAGGAAACCAATTTG+TGG | 0.551821 | 7_3:-57420299 | Msa1111690:CDS |
| GATTGTTTACTTGGCCACAT+TGG | 0.552158 | 7_3:+57420880 | None:intergenic |
| AGCAAGCCTCGTGGATTGAA+GGG | 0.560648 | 7_3:+57418391 | None:intergenic |
| TAGAACTTAGAATCAAAAGA+AGG | 0.561985 | 7_3:+57420819 | None:intergenic |
| AACCTGTAACTTGTCACCTG+TGG | 0.562152 | 7_3:+57419507 | None:intergenic |
| GCAATGGTTTATACAAGTGA+AGG | 0.562161 | 7_3:+57421058 | None:intergenic |
| CTACACAAATTCAACGTGCA+TGG | 0.563061 | 7_3:+57418236 | None:intergenic |
| CTTCTAGTCCAATCTCCACT+AGG | 0.564151 | 7_3:+57419329 | None:intergenic |
| GAAGTCTTTGAGGTGTTGAA+GGG | 0.566002 | 7_3:+57419296 | None:intergenic |
| TTGTGGCAGGTATTTCCTGA+AGG | 0.566518 | 7_3:-57418482 | Msa1111690:CDS |
| ACCTGTAACTTGTCACCTGT+GGG | 0.569730 | 7_3:+57419508 | None:intergenic |
| AACAATTGGGAGGCCTATGG+TGG | 0.571835 | 7_3:-57419844 | Msa1111690:CDS |
| TATGTCTATAGCTTTACAGT+GGG | 0.572477 | 7_3:+57418264 | None:intergenic |
| TTCACTTACCACAAAGTCCA+AGG | 0.575266 | 7_3:+57419906 | None:intergenic |
| GGACTTGTAGTAGCTTCTAA+GGG | 0.576533 | 7_3:+57419744 | None:intergenic |
| AATAATGTGGGACATGGAAG+AGG | 0.582210 | 7_3:-57420341 | Msa1111690:CDS |
| AACCGAAGGGGATTTCTGTA+GGG | 0.582430 | 7_3:+57420111 | None:intergenic |
| TTCACATGTATGCTGACTCA+TGG | 0.584536 | 7_3:-57419189 | Msa1111690:intron |
| GGAAGAGGATGAATGGCAAA+TGG | 0.586451 | 7_3:-57420326 | Msa1111690:CDS |
| CTTCTTCATCATAAACCGAA+GGG | 0.589777 | 7_3:+57420098 | None:intergenic |
| TTCAAACAAGCATCCTCACT+AGG | 0.590988 | 7_3:-57420181 | Msa1111690:CDS |
| CTAAACTCCACAAAGAAAGG+AGG | 0.591140 | 7_3:-57418524 | Msa1111690:CDS |
| ATGGATGGATGCACACATAG+AGG | 0.592357 | 7_3:-57418666 | Msa1111690:CDS |
| GGGCTTTCAATGATGGCCAA+GGG | 0.594743 | 7_3:-57420138 | Msa1111690:CDS |
| GAGTGAAATAATGTGGGACA+TGG | 0.597084 | 7_3:-57420347 | Msa1111690:CDS |
| GGGACATGGAAGAGGATGAA+TGG | 0.597454 | 7_3:-57420333 | Msa1111690:CDS |
| TGTTAAGGAGTGAAATAATG+TGG | 0.599818 | 7_3:-57420354 | Msa1111690:intron |
| GATGAAGAGGCACAAAAGGA+AGG | 0.602151 | 7_3:-57420779 | Msa1111690:CDS |
| GCAGGTATTTCCTGAAGGAA+CGG | 0.606073 | 7_3:-57418477 | Msa1111690:CDS |
| AATTGATCCAAAACACCTAG+TGG | 0.607164 | 7_3:-57419344 | Msa1111690:CDS |
| ACTTCTTCATCATAAACCGA+AGG | 0.607342 | 7_3:+57420097 | None:intergenic |
| GTTAAGGAGTGAAATAATGT+GGG | 0.609450 | 7_3:-57420353 | Msa1111690:intron |
| AGATGCAACTCTGATCCCAC+AGG | 0.612987 | 7_3:-57419523 | Msa1111690:CDS |
| TAAACTCCACAAAGAAAGGA+GGG | 0.617337 | 7_3:-57418523 | Msa1111690:CDS |
| ATCATTGGCCAACAATTGGG+AGG | 0.617845 | 7_3:-57419854 | Msa1111690:CDS |
| GTTACAATACTTGAAGTGGA+AGG | 0.619163 | 7_3:+57418413 | None:intergenic |
| ACAAACTGTCATACCTAGTG+AGG | 0.620363 | 7_3:+57420168 | None:intergenic |
| GATCAAACTCAGAAGATTAG+CGG | 0.621759 | 7_3:+57420967 | None:intergenic |
| GGAACGGATAATATGGATGA+CGG | 0.623585 | 7_3:-57418461 | Msa1111690:CDS |
| ATATGTGTATCTGCAATTTG+TGG | 0.623688 | 7_3:+57418704 | None:intergenic |
| GAAAGTGCCTTAGGAAACAA+AGG | 0.626806 | 7_3:-57421102 | Msa1111690:five_prime_UTR |
| TAACATGCCCTAATAGAGCA+TGG | 0.629277 | 7_3:-57420903 | Msa1111690:five_prime_UTR |
| CTAATAGAGCATGGCCAATG+TGG | 0.636265 | 7_3:-57420894 | Msa1111690:five_prime_UTR |
| TTCTTCATCATAAACCGAAG+GGG | 0.640116 | 7_3:+57420099 | None:intergenic |
| ATTGCATCTGGTAGAACACA+AGG | 0.641862 | 7_3:+57418358 | None:intergenic |
| ATATGTCTATAGCTTTACAG+TGG | 0.645582 | 7_3:+57418263 | None:intergenic |
| AGGATGAATGGCAAATGGTG+GGG | 0.647855 | 7_3:-57420321 | Msa1111690:CDS |
| TGAGTAGAAGTCATCATCAG+AGG | 0.649203 | 7_3:+57419774 | None:intergenic |
| AAAGGAACTTGCCTTAACAT+GGG | 0.651206 | 7_3:+57419723 | None:intergenic |
| AAAGCACAATATGTGAAATG+GGG | 0.673517 | 7_3:-57419820 | Msa1111690:CDS |
| GTTGAACAAAGCAAGCCTCG+TGG | 0.681133 | 7_3:+57418382 | None:intergenic |
| GCTGCAGATAACTCCACCAG+AGG | 0.697287 | 7_3:-57420220 | Msa1111690:CDS |
| TTGTAACCCTTCAATCCACG+AGG | 0.744151 | 7_3:-57418397 | Msa1111690:CDS |
| CACCAGAGGAAAAGTCACTG+AGG | 0.767981 | 7_3:-57420206 | Msa1111690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGTTTATTAAAGTA+TGG | - | chr7_3:57418572-57418591 | Msa1111690:CDS | 10.0% |
| !!! | CTATTTATTTATTAACATTT+TGG | - | chr7_3:57420092-57420111 | Msa1111690:CDS | 10.0% |
| !! | AAATTAAACTCATTAAGTTA+AGG | + | chr7_3:57419154-57419173 | None:intergenic | 15.0% |
| !!! | TTTAAAATCATTCATTTGAT+TGG | + | chr7_3:57419229-57419248 | None:intergenic | 15.0% |
| !! | TTAGAAAATGTATATTACAA+GGG | + | chr7_3:57420118-57420137 | None:intergenic | 15.0% |
| !! | ATTAGAAAATGTATATTACA+AGG | + | chr7_3:57420119-57420138 | None:intergenic | 15.0% |
| !!! | CTTTAAATATTTGTGTATTT+TGG | + | chr7_3:57420267-57420286 | None:intergenic | 15.0% |
| !! | CAAAATACACAAATATTTAA+AGG | - | chr7_3:57420265-57420284 | Msa1111690:CDS | 15.0% |
| !! | TATAAAATATAACAGCTAGA+GGG | + | chr7_3:57418509-57418528 | None:intergenic | 20.0% |
| !! | ATATAAAATATAACAGCTAG+AGG | + | chr7_3:57418510-57418529 | None:intergenic | 20.0% |
| !! | TACTAAACTAAAATGATCAT+AGG | + | chr7_3:57418667-57418686 | None:intergenic | 20.0% |
| !!! | AATATTTGATTCAGTTTTCA+AGG | + | chr7_3:57418824-57418843 | None:intergenic | 20.0% |
| !! | TTGAAAACTGAATCAAATAT+TGG | - | chr7_3:57418823-57418842 | Msa1111690:intron | 20.0% |
| !!! | CAAATATTGGTTTTTTGTAA+TGG | - | chr7_3:57418836-57418855 | Msa1111690:intron | 20.0% |
| !! | TTGAATCCATTTATATAGAA+AGG | + | chr7_3:57418951-57418970 | None:intergenic | 20.0% |
| !! | TCAAATGTTTAAATGTTTGA+CGG | - | chr7_3:57419266-57419285 | Msa1111690:CDS | 20.0% |
| !! | ATTCACAAATATCACTTATA+AGG | - | chr7_3:57419626-57419645 | Msa1111690:intron | 20.0% |
| !! | CACTTGTGAATATATATTAT+AGG | - | chr7_3:57419812-57419831 | Msa1111690:CDS | 20.0% |
| !! | GTGAATATATATTATAGGAT+TGG | - | chr7_3:57419817-57419836 | Msa1111690:CDS | 20.0% |
| !! | TTAGGAATAAAACCAAAAAT+AGG | + | chr7_3:57420157-57420176 | None:intergenic | 20.0% |
| !!! | AACAACATTTTCTATGTTTT+AGG | + | chr7_3:57420175-57420194 | None:intergenic | 20.0% |
| !! | ATATGTGGATATATTGATAT+TGG | + | chr7_3:57420230-57420249 | None:intergenic | 20.0% |
| !! | AAGACTAAAACTTAAAAAAC+AGG | - | chr7_3:57420337-57420356 | Msa1111690:CDS | 20.0% |
| !! | ATATCTCATTTGTAAAATCA+TGG | - | chr7_3:57420528-57420547 | Msa1111690:intron | 20.0% |
| ! | TATAAACCATTGCTCAAAAA+TGG | - | chr7_3:57418165-57418184 | Msa1111690:three_prime_UTR | 25.0% |
| ! | AACAATCTCAATGAAGAAAA+TGG | - | chr7_3:57418349-57418368 | Msa1111690:CDS | 25.0% |
| ! | ACAATCTCAATGAAGAAAAT+GGG | - | chr7_3:57418350-57418369 | Msa1111690:CDS | 25.0% |
| ! | TAGAACTTAGAATCAAAAGA+AGG | + | chr7_3:57418397-57418416 | None:intergenic | 25.0% |
| !!! | TAAGTTCTAATGCTTTTAGT+AGG | - | chr7_3:57418408-57418427 | Msa1111690:CDS | 25.0% |
| !!! | AAGTTCTAATGCTTTTAGTA+GGG | - | chr7_3:57418409-57418428 | Msa1111690:CDS | 25.0% |
| ! | ATAAGCCTATCACAAATTAT+GGG | - | chr7_3:57418471-57418490 | Msa1111690:CDS | 25.0% |
| !! | TTTTAAACAAAAGGTTCAGA+AGG | + | chr7_3:57418737-57418756 | None:intergenic | 25.0% |
| !!! | CCTTTTGTTTAAAACTCTTT+CGG | - | chr7_3:57418743-57418762 | Msa1111690:intron | 25.0% |
| ! | TAAAAGAACAAACATACCAT+TGG | + | chr7_3:57418800-57418819 | None:intergenic | 25.0% |
| ! | AAGCAAAGAAATACAAAATC+AGG | - | chr7_3:57419328-57419347 | Msa1111690:CDS | 25.0% |
| !! | AAAAGCACAATATGTGAAAT+GGG | - | chr7_3:57419392-57419411 | Msa1111690:intron | 25.0% |
| ! | GAGTTGTTTACATTTAAGAA+AGG | + | chr7_3:57419511-57419530 | None:intergenic | 25.0% |
| ! | ACTAAAACTTAAAAAACAGG+AGG | - | chr7_3:57420340-57420359 | Msa1111690:CDS | 25.0% |
| ! | CTAAAACTTAAAAAACAGGA+GGG | - | chr7_3:57420341-57420360 | Msa1111690:CDS | 25.0% |
| ! | AACCAAACACATTATTAAGT+AGG | + | chr7_3:57420409-57420428 | None:intergenic | 25.0% |
| !! | AAGTCAATTATCTTGTTTGA+AGG | - | chr7_3:57420480-57420499 | Msa1111690:intron | 25.0% |
| !! | AGTCAATTATCTTGTTTGAA+GGG | - | chr7_3:57420481-57420500 | Msa1111690:intron | 25.0% |
| ! | TTGTAAGAAGAAGAAAATGT+TGG | - | chr7_3:57420883-57420902 | Msa1111690:five_prime_UTR | 25.0% |
| !! | TATGTTCCATTTTTGAGCAA+TGG | + | chr7_3:57418174-57418193 | None:intergenic | 30.0% |
| CTGAGTTTGATCAATTTCTA+TGG | - | chr7_3:57418257-57418276 | Msa1111690:three_prime_UTR | 30.0% | |
| CTTCATTGAGATTGTTTACT+TGG | + | chr7_3:57418345-57418364 | None:intergenic | 30.0% | |
| CATAAGCCTATCACAAATTA+TGG | - | chr7_3:57418470-57418489 | Msa1111690:CDS | 30.0% | |
| ! | TCATACCCATAATTTGTGAT+AGG | + | chr7_3:57418479-57418498 | None:intergenic | 30.0% |
| AAACCTCGTACAAAAAAAGT+TGG | + | chr7_3:57418547-57418566 | None:intergenic | 30.0% | |
| !!! | CCGAAAGAGTTTTAAACAAA+AGG | + | chr7_3:57418746-57418765 | None:intergenic | 30.0% |
| !!! | GGTTTTTTGTAATGGTGTTA+AGG | - | chr7_3:57418844-57418863 | Msa1111690:intron | 30.0% |
| TGTTAAGGAGTGAAATAATG+TGG | - | chr7_3:57418859-57418878 | Msa1111690:intron | 30.0% | |
| GTTAAGGAGTGAAATAATGT+GGG | - | chr7_3:57418860-57418879 | Msa1111690:intron | 30.0% | |
| ! | TAAATGGATTCAACACATAC+TGG | - | chr7_3:57418958-57418977 | Msa1111690:intron | 30.0% |
| TTATGATGAAGAAGTCTTCA+AGG | - | chr7_3:57419124-57419143 | Msa1111690:intron | 30.0% | |
| AATCAGGCTGATATTATCAT+TGG | - | chr7_3:57419344-57419363 | Msa1111690:CDS | 30.0% | |
| TATTATCATTGGCCAACAAT+TGG | - | chr7_3:57419355-57419374 | Msa1111690:CDS | 30.0% | |
| ATTATCATTGGCCAACAATT+GGG | - | chr7_3:57419356-57419375 | Msa1111690:CDS | 30.0% | |
| ! | GAAAAGCACAATATGTGAAA+TGG | - | chr7_3:57419391-57419410 | Msa1111690:intron | 30.0% |
| AAAGCACAATATGTGAAATG+GGG | - | chr7_3:57419393-57419412 | Msa1111690:intron | 30.0% | |
| !! | AGCTTTCAAGTAAGCAATTT+TGG | + | chr7_3:57419538-57419557 | None:intergenic | 30.0% |
| TATCCAGTAGAAGTTTACTA+GGG | + | chr7_3:57419735-57419754 | None:intergenic | 30.0% | |
| ATATCCAGTAGAAGTTTACT+AGG | + | chr7_3:57419736-57419755 | None:intergenic | 30.0% | |
| ATAGGATTGGATACAAGAAA+TGG | - | chr7_3:57419830-57419849 | Msa1111690:CDS | 30.0% | |
| ! | TTGGATCAATTTTCTTCACA+TGG | + | chr7_3:57419860-57419879 | None:intergenic | 30.0% |
| !! | ATTGGACTAGAAGGATTTTA+TGG | - | chr7_3:57419894-57419913 | Msa1111690:CDS | 30.0% |
| !! | AAGTTGGAACTGATTTTATC+AGG | - | chr7_3:57419967-57419986 | Msa1111690:intron | 30.0% |
| ACCAAAAATAGGAAGAATGA+GGG | + | chr7_3:57420146-57420165 | None:intergenic | 30.0% | |
| AACCAAAAATAGGAAGAATG+AGG | + | chr7_3:57420147-57420166 | None:intergenic | 30.0% | |
| GAACCAAAACTAAAACAACA+AGG | - | chr7_3:57420287-57420306 | Msa1111690:CDS | 30.0% | |
| !!! | GAACCTTGTTGTTTTAGTTT+TGG | + | chr7_3:57420293-57420312 | None:intergenic | 30.0% |
| ! | ATTAAGTAGGCAGAAAGTAT+TGG | + | chr7_3:57420396-57420415 | None:intergenic | 30.0% |
| TGCCTACTTAATAATGTGTT+TGG | - | chr7_3:57420404-57420423 | Msa1111690:intron | 30.0% | |
| ATATGTGTATCTGCAATTTG+TGG | + | chr7_3:57420512-57420531 | None:intergenic | 30.0% | |
| CTCATTTGTAAAATCATGGA+TGG | - | chr7_3:57420532-57420551 | Msa1111690:intron | 30.0% | |
| ! | TATGTCTATAGCTTTACAGT+GGG | + | chr7_3:57420952-57420971 | None:intergenic | 30.0% |
| ! | ATATGTCTATAGCTTTACAG+TGG | + | chr7_3:57420953-57420972 | None:intergenic | 30.0% |
| ACATGCTTTCTATCTTAAGA+TGG | + | chr7_3:57421016-57421035 | None:intergenic | 30.0% | |
| TACCAGTTATGCATAATTGT+CGG | - | chr7_3:57421061-57421080 | Msa1111690:five_prime_UTR | 30.0% | |
| ! | AACATCACCTTTGTTTCCTA+AGG | + | chr7_3:57418121-57418140 | None:intergenic | 35.0% |
| GCAATGGTTTATACAAGTGA+AGG | + | chr7_3:57418158-57418177 | None:intergenic | 35.0% | |
| ATCAAACTCAGAAGATTAGC+GGG | + | chr7_3:57418248-57418267 | None:intergenic | 35.0% | |
| GATCAAACTCAGAAGATTAG+CGG | + | chr7_3:57418249-57418268 | None:intergenic | 35.0% | |
| ! | TTCTAATGCTTTTAGTAGGG+TGG | - | chr7_3:57418412-57418431 | Msa1111690:CDS | 35.0% |
| TAGGCTTATGTAGATGATCT+TGG | + | chr7_3:57418460-57418479 | None:intergenic | 35.0% | |
| ! | ACAAAAAAAGTTGGTCTGGT+TGG | + | chr7_3:57418538-57418557 | None:intergenic | 35.0% |
| ! | TCGTACAAAAAAAGTTGGTC+TGG | + | chr7_3:57418542-57418561 | None:intergenic | 35.0% |
| !!! | AGACCAACTTTTTTTGTACG+AGG | - | chr7_3:57418541-57418560 | Msa1111690:CDS | 35.0% |
| GAAGAAAGGAAACCAATTTG+TGG | - | chr7_3:57418914-57418933 | Msa1111690:intron | 35.0% | |
| GGTCAGCCTTTCTATATAAA+TGG | - | chr7_3:57418942-57418961 | Msa1111690:intron | 35.0% | |
| TATGACAGTTTGTAGGACTT+GGG | - | chr7_3:57419055-57419074 | Msa1111690:intron | 35.0% | |
| TTCTTCATCATAAACCGAAG+GGG | + | chr7_3:57419117-57419136 | None:intergenic | 35.0% | |
| CTTCTTCATCATAAACCGAA+GGG | + | chr7_3:57419118-57419137 | None:intergenic | 35.0% | |
| ACTTCTTCATCATAAACCGA+AGG | + | chr7_3:57419119-57419138 | None:intergenic | 35.0% | |
| ! | ATATTGTGCTTTTCCACCAT+AGG | + | chr7_3:57419385-57419404 | None:intergenic | 35.0% |
| AAAGGAACTTGCCTTAACAT+GGG | + | chr7_3:57419493-57419512 | None:intergenic | 35.0% | |
| TGCTTACTTGAAAGCTTGAT+TGG | - | chr7_3:57419542-57419561 | Msa1111690:CDS | 35.0% | |
| !! | AAGATCCTACCATTTTTGCT+TGG | - | chr7_3:57419649-57419668 | Msa1111690:intron | 35.0% |
| !! | AGATCCTACCATTTTTGCTT+GGG | - | chr7_3:57419650-57419669 | Msa1111690:intron | 35.0% |
| ATCCAGTAGAAGTTTACTAG+GGG | + | chr7_3:57419734-57419753 | None:intergenic | 35.0% | |
| AGTGCAACTACATGATATCA+TGG | + | chr7_3:57419781-57419800 | None:intergenic | 35.0% | |
| AATTGATCCAAAACACCTAG+TGG | - | chr7_3:57419869-57419888 | Msa1111690:CDS | 35.0% | |
| ! | ACTTGTTGAGCATATGCATT+TGG | + | chr7_3:57419951-57419970 | None:intergenic | 35.0% |
| AATGCATATGCTCAACAAGT+TGG | - | chr7_3:57419951-57419970 | Msa1111690:intron | 35.0% | |
| GTTTATCACAGACTAGCAAA+TGG | + | chr7_3:57420071-57420090 | None:intergenic | 35.0% | |
| CCAAAAATAGGAAGAATGAG+GGG | + | chr7_3:57420145-57420164 | None:intergenic | 35.0% | |
| GAATCAGTTGCTGTAATATG+TGG | + | chr7_3:57420245-57420264 | None:intergenic | 35.0% | |
| CCAAACTCAGAAAAAACAAC+TGG | + | chr7_3:57420596-57420615 | None:intergenic | 35.0% | |
| !!! | CCAGTTGTTTTTTCTGAGTT+TGG | - | chr7_3:57420593-57420612 | Msa1111690:intron | 35.0% |
| ATCCTAAACTCCACAAAGAA+AGG | - | chr7_3:57420686-57420705 | Msa1111690:intron | 35.0% | |
| TAAACTCCACAAAGAAAGGA+GGG | - | chr7_3:57420690-57420709 | Msa1111690:intron | 35.0% | |
| GTTACAATACTTGAAGTGGA+AGG | + | chr7_3:57420803-57420822 | None:intergenic | 35.0% | |
| AAGGGTTACAATACTTGAAG+TGG | + | chr7_3:57420807-57420826 | None:intergenic | 35.0% | |
| TTCCGACAATTATGCATAAC+TGG | + | chr7_3:57421066-57421085 | None:intergenic | 35.0% | |
| ! | TTCCTAAGGCACTTTCAAGT+GGG | + | chr7_3:57418107-57418126 | None:intergenic | 40.0% |
| ! | TTTCCTAAGGCACTTTCAAG+TGG | + | chr7_3:57418108-57418127 | None:intergenic | 40.0% |
| !! | GAAAGTGCCTTAGGAAACAA+AGG | - | chr7_3:57418111-57418130 | Msa1111690:three_prime_UTR | 40.0% |
| TAACATGCCCTAATAGAGCA+TGG | - | chr7_3:57418310-57418329 | Msa1111690:CDS | 40.0% | |
| ACATTGGCCATGCTCTATTA+GGG | + | chr7_3:57418320-57418339 | None:intergenic | 40.0% | |
| GATTGTTTACTTGGCCACAT+TGG | + | chr7_3:57418336-57418355 | None:intergenic | 40.0% | |
| ! | TTTTAGTAGGGTGGATGAAG+AGG | - | chr7_3:57418421-57418440 | Msa1111690:CDS | 40.0% |
| AACAAACATACCATTGGCCA+CGG | + | chr7_3:57418794-57418813 | None:intergenic | 40.0% | |
| GAGTGAAATAATGTGGGACA+TGG | - | chr7_3:57418866-57418885 | Msa1111690:intron | 40.0% | |
| AATAATGTGGGACATGGAAG+AGG | - | chr7_3:57418872-57418891 | Msa1111690:intron | 40.0% | |
| GGAAACCAATTTGTGGTGAA+TGG | - | chr7_3:57418921-57418940 | Msa1111690:intron | 40.0% | |
| TTCAAACAAGCATCCTCACT+AGG | - | chr7_3:57419032-57419051 | Msa1111690:intron | 40.0% | |
| ACAAACTGTCATACCTAGTG+AGG | + | chr7_3:57419048-57419067 | None:intergenic | 40.0% | |
| CACTAGGTATGACAGTTTGT+AGG | - | chr7_3:57419048-57419067 | Msa1111690:intron | 40.0% | |
| GTATGACAGTTTGTAGGACT+TGG | - | chr7_3:57419054-57419073 | Msa1111690:intron | 40.0% | |
| GACGGTTATGATTGATATGC+AGG | - | chr7_3:57419284-57419303 | Msa1111690:CDS | 40.0% | |
| TATGATTGATATGCAGGCCT+TGG | - | chr7_3:57419290-57419309 | Msa1111690:CDS | 40.0% | |
| TTCACTTACCACAAAGTCCA+AGG | + | chr7_3:57419310-57419329 | None:intergenic | 40.0% | |
| CATCATCAGAGGTCAAGTTA+AGG | + | chr7_3:57419431-57419450 | None:intergenic | 40.0% | |
| TGAGTAGAAGTCATCATCAG+AGG | + | chr7_3:57419442-57419461 | None:intergenic | 40.0% | |
| GGACTTGTAGTAGCTTCTAA+GGG | + | chr7_3:57419472-57419491 | None:intergenic | 40.0% | |
| CTACTACAAGTCCCATGTTA+AGG | - | chr7_3:57419479-57419498 | Msa1111690:intron | 40.0% | |
| GAAAGGAACTTGCCTTAACA+TGG | + | chr7_3:57419494-57419513 | None:intergenic | 40.0% | |
| AGTTCCCAAGCAAAAATGGT+AGG | + | chr7_3:57419657-57419676 | None:intergenic | 40.0% | |
| CATCAGTTCCCAAGCAAAAA+TGG | + | chr7_3:57419661-57419680 | None:intergenic | 40.0% | |
| !! | GAAGTCTTTGAGGTGTTGAA+GGG | + | chr7_3:57419920-57419939 | None:intergenic | 40.0% |
| !! | TGAAGTCTTTGAGGTGTTGA+AGG | + | chr7_3:57419921-57419940 | None:intergenic | 40.0% |
| GGATTGAACTGAAGTCTTTG+AGG | + | chr7_3:57419930-57419949 | None:intergenic | 40.0% | |
| ATCAGGAACCATCAAGTTCT+TGG | - | chr7_3:57419984-57420003 | Msa1111690:intron | 40.0% | |
| AGTCTACACCAAGAACTTGA+TGG | + | chr7_3:57419995-57420014 | None:intergenic | 40.0% | |
| !! | TTCACATGTATGCTGACTCA+TGG | - | chr7_3:57420024-57420043 | Msa1111690:intron | 40.0% |
| ! | CCCCTCATTCTTCCTATTTT+TGG | - | chr7_3:57420142-57420161 | Msa1111690:CDS | 40.0% |
| GAGGGACTAAAACAAGACTA+CGG | - | chr7_3:57420359-57420378 | Msa1111690:intron | 40.0% | |
| !! | GAGGATGCTGAAAAGTATCT+TGG | - | chr7_3:57420566-57420585 | Msa1111690:intron | 40.0% |
| !! | TGAGTTTGGTGTATCATCCA+AGG | - | chr7_3:57420607-57420626 | Msa1111690:intron | 40.0% |
| ! | CTATATGTTGAGTTGTAGCC+AGG | + | chr7_3:57420635-57420654 | None:intergenic | 40.0% |
| CTCCTTTCTTTGTGGAGTTT+AGG | + | chr7_3:57420691-57420710 | None:intergenic | 40.0% | |
| CTAAACTCCACAAAGAAAGG+AGG | - | chr7_3:57420689-57420708 | Msa1111690:intron | 40.0% | |
| TCCTGAAGGAACGGATAATA+TGG | - | chr7_3:57420745-57420764 | Msa1111690:CDS | 40.0% | |
| TCCATATTATCCGTTCCTTC+AGG | + | chr7_3:57420749-57420768 | None:intergenic | 40.0% | |
| GGAACGGATAATATGGATGA+CGG | - | chr7_3:57420752-57420771 | Msa1111690:CDS | 40.0% | |
| ATTGCATCTGGTAGAACACA+AGG | + | chr7_3:57420858-57420877 | None:intergenic | 40.0% | |
| TGTGTTCTACCAGATGCAAT+TGG | - | chr7_3:57420858-57420877 | Msa1111690:exon | 40.0% | |
| CTTACAACTCCAATTGCATC+TGG | + | chr7_3:57420870-57420889 | None:intergenic | 40.0% | |
| CTACACAAATTCAACGTGCA+TGG | + | chr7_3:57420980-57420999 | None:intergenic | 40.0% | |
| !! | AACCCACTTGAAAGTGCCTT+AGG | - | chr7_3:57418102-57418121 | Msa1111690:three_prime_UTR | 45.0% |
| CACATTGGCCATGCTCTATT+AGG | + | chr7_3:57418321-57418340 | None:intergenic | 45.0% | |
| CTAATAGAGCATGGCCAATG+TGG | - | chr7_3:57418319-57418338 | Msa1111690:CDS | 45.0% | |
| ! | GATGAAGAGGCACAAAAGGA+AGG | - | chr7_3:57418434-57418453 | Msa1111690:CDS | 45.0% |
| !! | TCTTTCGGTGTCGTTTAGCT+CGG | - | chr7_3:57418758-57418777 | Msa1111690:intron | 45.0% |
| GGAAGAGGATGAATGGCAAA+TGG | - | chr7_3:57418887-57418906 | Msa1111690:intron | 45.0% | |
| AGAGGATGAATGGCAAATGG+TGG | - | chr7_3:57418890-57418909 | Msa1111690:intron | 45.0% | |
| GAGGATGAATGGCAAATGGT+GGG | - | chr7_3:57418891-57418910 | Msa1111690:intron | 45.0% | |
| AGGATGAATGGCAAATGGTG+GGG | - | chr7_3:57418892-57418911 | Msa1111690:intron | 45.0% | |
| GCTGACCATTCACCACAAAT+TGG | + | chr7_3:57418929-57418948 | None:intergenic | 45.0% | |
| ! | AACCTCAGTGACTTTTCCTC+TGG | + | chr7_3:57419012-57419031 | None:intergenic | 45.0% |
| AGGACTTGGGCTTTCAATGA+TGG | - | chr7_3:57419068-57419087 | Msa1111690:intron | 45.0% | |
| AACCGAAGGGGATTTCTGTA+GGG | + | chr7_3:57419105-57419124 | None:intergenic | 45.0% | |
| AAACCGAAGGGGATTTCTGT+AGG | + | chr7_3:57419106-57419125 | None:intergenic | 45.0% | |
| ATCATTGGCCAACAATTGGG+AGG | - | chr7_3:57419359-57419378 | Msa1111690:CDS | 45.0% | |
| GGGACTTGTAGTAGCTTCTA+AGG | + | chr7_3:57419473-57419492 | None:intergenic | 45.0% | |
| ! | ACCTGTAACTTGTCACCTGT+GGG | + | chr7_3:57419708-57419727 | None:intergenic | 45.0% |
| ! | AACCTGTAACTTGTCACCTG+TGG | + | chr7_3:57419709-57419728 | None:intergenic | 45.0% |
| TGCCCCTAGTAAACTTCTAC+TGG | - | chr7_3:57419729-57419748 | Msa1111690:intron | 45.0% | |
| ! | CCAATCTCCACTAGGTGTTT+TGG | + | chr7_3:57419879-57419898 | None:intergenic | 45.0% |
| CCAAAACACCTAGTGGAGAT+TGG | - | chr7_3:57419876-57419895 | Msa1111690:CDS | 45.0% | |
| CTTCTAGTCCAATCTCCACT+AGG | + | chr7_3:57419887-57419906 | None:intergenic | 45.0% | |
| ! | CTAGTGGAGATTGGACTAGA+AGG | - | chr7_3:57419885-57419904 | Msa1111690:CDS | 45.0% |
| ATGGATGGATGCACACATAG+AGG | - | chr7_3:57420547-57420566 | Msa1111690:intron | 45.0% | |
| CAGGAAATACCTGCCACAAA+AGG | + | chr7_3:57420730-57420749 | None:intergenic | 45.0% | |
| TTGTGGCAGGTATTTCCTGA+AGG | - | chr7_3:57420731-57420750 | Msa1111690:intron | 45.0% | |
| GCAGGTATTTCCTGAAGGAA+CGG | - | chr7_3:57420736-57420755 | Msa1111690:intron | 45.0% | |
| TTGTAACCCTTCAATCCACG+AGG | - | chr7_3:57420816-57420835 | Msa1111690:CDS | 45.0% | |
| !!! | ATTTTTCATTATTTTTAAAT+TGG | - | chr7_3:57418595-57418614 | Msa1111690:CDS | 5.0% |
| ! | GGTGGATGAAGAGGCACAAA+AGG | - | chr7_3:57418430-57418449 | Msa1111690:CDS | 50.0% |
| !! | GTGTCGTTTAGCTCGGTGTT+CGG | - | chr7_3:57418765-57418784 | Msa1111690:intron | 50.0% |
| GGGACATGGAAGAGGATGAA+TGG | - | chr7_3:57418880-57418899 | Msa1111690:intron | 50.0% | |
| ! | TGGCAAATGGTGGGGAAGAA+AGG | - | chr7_3:57418900-57418919 | Msa1111690:intron | 50.0% |
| ! | CTCAGTGACTTTTCCTCTGG+TGG | + | chr7_3:57419009-57419028 | None:intergenic | 50.0% |
| CACCAGAGGAAAAGTCACTG+AGG | - | chr7_3:57419007-57419026 | Msa1111690:intron | 50.0% | |
| TGGGCTTTCAATGATGGCCA+AGG | - | chr7_3:57419074-57419093 | Msa1111690:intron | 50.0% | |
| GGGCTTTCAATGATGGCCAA+GGG | - | chr7_3:57419075-57419094 | Msa1111690:intron | 50.0% | |
| CTTTCAATGATGGCCAAGGG+CGG | - | chr7_3:57419078-57419097 | Msa1111690:intron | 50.0% | |
| TTTCAATGATGGCCAAGGGC+GGG | - | chr7_3:57419079-57419098 | Msa1111690:intron | 50.0% | |
| TATGCAGGCCTTGGACTTTG+TGG | - | chr7_3:57419299-57419318 | Msa1111690:CDS | 50.0% | |
| ACCATAGGCCTCCCAATTGT+TGG | + | chr7_3:57419370-57419389 | None:intergenic | 50.0% | |
| AACAATTGGGAGGCCTATGG+TGG | - | chr7_3:57419369-57419388 | Msa1111690:CDS | 50.0% | |
| GTGAAATGGGGCAAAGATGC+TGG | - | chr7_3:57419405-57419424 | Msa1111690:intron | 50.0% | |
| GTGGGATCAGAGTTGCATCT+AGG | + | chr7_3:57419690-57419709 | None:intergenic | 50.0% | |
| AGATGCAACTCTGATCCCAC+AGG | - | chr7_3:57419690-57419709 | Msa1111690:intron | 50.0% | |
| TCCCACAGGTGACAAGTTAC+AGG | - | chr7_3:57419704-57419723 | Msa1111690:intron | 50.0% | |
| GGTGTATCATCCAAGGATCC+TGG | - | chr7_3:57420614-57420633 | Msa1111690:intron | 50.0% | |
| TGAGTTGTAGCCAGGATCCT+TGG | + | chr7_3:57420627-57420646 | None:intergenic | 50.0% | |
| TCCACAAAGAAAGGAGGGAG+TGG | - | chr7_3:57420695-57420714 | Msa1111690:intron | 50.0% | |
| TCCACTCCCTCCTTTCTTTG+TGG | + | chr7_3:57420699-57420718 | None:intergenic | 50.0% | |
| ! | AGCAAGCCTCGTGGATTGAA+GGG | + | chr7_3:57420825-57420844 | None:intergenic | 50.0% |
| ! | AAGCAAGCCTCGTGGATTGA+AGG | + | chr7_3:57420826-57420845 | None:intergenic | 50.0% |
| GTTGAACAAAGCAAGCCTCG+TGG | + | chr7_3:57420834-57420853 | None:intergenic | 50.0% | |
| TGTTCGGTAACCGTGGCCAA+TGG | - | chr7_3:57418781-57418800 | Msa1111690:intron | 55.0% | |
| GCTGCAGATAACTCCACCAG+AGG | - | chr7_3:57418993-57419012 | Msa1111690:intron | 55.0% | |
| GGCCCTACAGAAATCCCCTT+CGG | - | chr7_3:57419100-57419119 | Msa1111690:intron | 55.0% | |
| GCCAACAATTGGGAGGCCTA+TGG | - | chr7_3:57419366-57419385 | Msa1111690:CDS | 55.0% | |
| AAGAAAGGAGGGAGTGGAGC+TGG | - | chr7_3:57420701-57420720 | Msa1111690:intron | 55.0% | |
| ! | GTGGAGCTGGAAGCCTTTTG+TGG | - | chr7_3:57420714-57420733 | Msa1111690:intron | 55.0% |
| ! | AGCTGGAAGCCTTTTGTGGC+AGG | - | chr7_3:57420718-57420737 | Msa1111690:intron | 55.0% |
| !! | AGCTCGGTGTTCGGTAACCG+TGG | - | chr7_3:57418774-57418793 | Msa1111690:intron | 60.0% |
| ATTTCTGTAGGGCCCGCCCT+TGG | + | chr7_3:57419094-57419113 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 57418097 | 57421138 | 57418097 | ID=Msa1111690;Name=Msa1111690 |
| chr7_3 | mRNA | 57418097 | 57421138 | 57418097 | ID=Msa1111690-mRNA-1;Parent=Msa1111690;Name=Msa1111690-mRNA-1;_AED=0.10;_eAED=0.10;_QI=262|1|1|1|1|0.83|6|204|458 |
| chr7_3 | exon | 57418097 | 57418733 | 57418097 | ID=Msa1111690-mRNA-1:exon:12428;Parent=Msa1111690-mRNA-1 |
| chr7_3 | exon | 57419190 | 57419401 | 57419190 | ID=Msa1111690-mRNA-1:exon:12427;Parent=Msa1111690-mRNA-1 |
| chr7_3 | exon | 57419510 | 57419632 | 57419510 | ID=Msa1111690-mRNA-1:exon:12426;Parent=Msa1111690-mRNA-1 |
| chr7_3 | exon | 57419735 | 57419929 | 57419735 | ID=Msa1111690-mRNA-1:exon:12425;Parent=Msa1111690-mRNA-1 |
| chr7_3 | exon | 57420090 | 57420369 | 57420090 | ID=Msa1111690-mRNA-1:exon:12424;Parent=Msa1111690-mRNA-1 |
| chr7_3 | exon | 57420743 | 57421138 | 57420743 | ID=Msa1111690-mRNA-1:exon:12423;Parent=Msa1111690-mRNA-1 |
| chr7_3 | five_prime_UTR | 57420877 | 57421138 | 57420877 | ID=Msa1111690-mRNA-1:five_prime_utr;Parent=Msa1111690-mRNA-1 |
| chr7_3 | CDS | 57420743 | 57420876 | 57420743 | ID=Msa1111690-mRNA-1:cds;Parent=Msa1111690-mRNA-1 |
| chr7_3 | CDS | 57420090 | 57420369 | 57420090 | ID=Msa1111690-mRNA-1:cds;Parent=Msa1111690-mRNA-1 |
| chr7_3 | CDS | 57419735 | 57419929 | 57419735 | ID=Msa1111690-mRNA-1:cds;Parent=Msa1111690-mRNA-1 |
| chr7_3 | CDS | 57419510 | 57419632 | 57419510 | ID=Msa1111690-mRNA-1:cds;Parent=Msa1111690-mRNA-1 |
| chr7_3 | CDS | 57419190 | 57419401 | 57419190 | ID=Msa1111690-mRNA-1:cds;Parent=Msa1111690-mRNA-1 |
| chr7_3 | CDS | 57418301 | 57418733 | 57418301 | ID=Msa1111690-mRNA-1:cds;Parent=Msa1111690-mRNA-1 |
| chr7_3 | three_prime_UTR | 57418097 | 57418300 | 57418097 | ID=Msa1111690-mRNA-1:three_prime_utr;Parent=Msa1111690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
