Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154150 | XP_039683647.1 | 84.716 | 458 | 10 | 3 | 1 | 398 | 1 | 458 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154150 | sp|Q9LZV3|MAN6_ARATH | 55.000 | 460 | 128 | 7 | 3 | 398 | 4 | 448 | 0.0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154150 | A0A396H2J1 | 84.716 | 458 | 10 | 3 | 1 | 398 | 1 | 458 | 0.0 | 760 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1074660 | Msa1154150 | 0.833570 | 4.942564e-56 | -8.615850e-47 |
| Msa1111690 | Msa1154150 | 0.844449 | 7.507204e-59 | -8.615850e-47 |
| Msa1154150 | Msa1364630 | 0.834692 | 2.588300e-56 | -8.615850e-47 |
| Msa1154150 | Msa1429010 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154150 | MtrunA17_Chr7g0245051 | 84.716 | 458 | 10 | 3 | 1 | 398 | 1 | 458 | 0.0 | 760 |
| Msa1154150 | MtrunA17_Chr7g0245101 | 82.571 | 459 | 19 | 4 | 1 | 398 | 1 | 459 | 0.0 | 736 |
| Msa1154150 | MtrunA17_Chr8g0334501 | 66.520 | 454 | 82 | 6 | 8 | 397 | 13 | 460 | 0.0 | 597 |
| Msa1154150 | MtrunA17_Chr5g0404601 | 41.775 | 383 | 160 | 5 | 59 | 380 | 31 | 411 | 6.93e-100 | 303 |
| Msa1154150 | MtrunA17_Chr4g0020521 | 39.050 | 379 | 168 | 4 | 60 | 378 | 35 | 410 | 8.35e-99 | 300 |
| Msa1154150 | MtrunA17_Chr1g0193531 | 40.701 | 371 | 157 | 5 | 59 | 369 | 29 | 396 | 3.48e-95 | 290 |
| Msa1154150 | MtrunA17_Chr1g0193611 | 38.814 | 371 | 165 | 4 | 59 | 369 | 32 | 400 | 7.57e-94 | 287 |
| Msa1154150 | MtrunA17_Chr1g0193551 | 41.019 | 373 | 152 | 7 | 59 | 369 | 35 | 401 | 1.32e-92 | 284 |
| Msa1154150 | MtrunA17_Chr1g0193601 | 38.874 | 373 | 162 | 5 | 59 | 369 | 32 | 400 | 1.62e-91 | 281 |
| Msa1154150 | MtrunA17_Chr3g0141751 | 38.482 | 382 | 166 | 8 | 49 | 368 | 17 | 391 | 2.36e-89 | 276 |
| Msa1154150 | MtrunA17_Chr7g0271511 | 39.084 | 371 | 160 | 6 | 59 | 369 | 62 | 426 | 2.19e-88 | 274 |
| Msa1154150 | MtrunA17_Chr4g0040121 | 38.520 | 392 | 178 | 6 | 43 | 372 | 24 | 414 | 1.56e-87 | 271 |
| Msa1154150 | MtrunA17_Chr2g0324441 | 37.368 | 380 | 175 | 4 | 53 | 369 | 34 | 413 | 5.24e-87 | 270 |
| Msa1154150 | MtrunA17_Chr1g0193541 | 35.695 | 367 | 147 | 6 | 60 | 369 | 32 | 366 | 3.15e-73 | 234 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154150 | AT5G01930.1 | 55.000 | 460 | 128 | 7 | 3 | 398 | 4 | 448 | 0.0 | 516 |
| Msa1154150 | AT5G66460.1 | 41.361 | 382 | 161 | 5 | 59 | 380 | 31 | 409 | 1.58e-97 | 298 |
| Msa1154150 | AT3G10890.1 | 39.410 | 373 | 164 | 7 | 59 | 370 | 31 | 402 | 5.22e-95 | 291 |
| Msa1154150 | AT3G10900.1 | 39.733 | 375 | 163 | 7 | 59 | 371 | 29 | 402 | 9.59e-90 | 277 |
| Msa1154150 | AT2G20680.1 | 37.666 | 377 | 174 | 4 | 54 | 369 | 37 | 413 | 5.30e-87 | 271 |
| Msa1154150 | AT4G28320.1 | 36.923 | 390 | 176 | 5 | 59 | 378 | 41 | 430 | 1.05e-86 | 270 |
| Msa1154150 | AT3G30540.1 | 44.295 | 298 | 141 | 6 | 59 | 332 | 29 | 325 | 8.17e-83 | 256 |
| Msa1154150 | AT1G02310.1 | 37.600 | 375 | 163 | 8 | 59 | 368 | 29 | 397 | 2.35e-82 | 258 |
| Msa1154150 | AT1G02310.2 | 37.600 | 375 | 163 | 8 | 59 | 368 | 49 | 417 | 3.21e-82 | 258 |
Find 112 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAACCTATCACAAATTA+TGG | 0.137834 | 7_4:-41500013 | Msa1154150:CDS |
| CACATTGGCCATGCTCTATT+AGG | 0.195101 | 7_4:+41500165 | None:intergenic |
| AACAATCTCAATGAAGAAAA+TGG | 0.201437 | 7_4:-41500134 | Msa1154150:exon |
| GGTCAGCCTTTCTATATAAA+TGG | 0.201660 | 7_4:-41499541 | Msa1154150:CDS |
| CTCCTTTCTTTGTGGAGTTT+AGG | 0.259533 | 7_4:+41497815 | None:intergenic |
| CTTCATTGAGATTGTTTACT+TGG | 0.269540 | 7_4:+41500141 | None:intergenic |
| CTGAGTTTGATCAATTTCTA+TGG | 0.277481 | 7_4:-41500226 | Msa1154150:five_prime_UTR |
| CCAATCTCCACTAGGTGTTT+TGG | 0.280198 | 7_4:+41498625 | None:intergenic |
| GGGACTTGTAGTAGCTTCTA+AGG | 0.281768 | 7_4:+41499013 | None:intergenic |
| AAGTTGGAACTGACTTTATC+AGG | 0.305873 | 7_4:-41498534 | Msa1154150:CDS |
| ATCAGGAACCACCAAGTTCT+TGG | 0.307715 | 7_4:-41498517 | Msa1154150:CDS |
| GCTGACCATTCACCACAAAT+TGG | 0.318298 | 7_4:+41499557 | None:intergenic |
| TTCCGACAATTATGCATAAC+TGG | 0.327327 | 7_4:+41497440 | None:intergenic |
| TCCACTCCCTCCTTTCTTTG+TGG | 0.336362 | 7_4:+41497807 | None:intergenic |
| TCCCACAGGTGACAAGTTAC+AGG | 0.338503 | 7_4:-41498779 | Msa1154150:intron |
| TCCTGAAGGAACAGATAATA+TGG | 0.339715 | 7_4:-41497758 | Msa1154150:CDS |
| ATTCACAAATATCACTTATA+AGG | 0.352293 | 7_4:-41498857 | Msa1154150:CDS |
| TCATACCCATAATTTGTGAT+AGG | 0.353905 | 7_4:+41500007 | None:intergenic |
| TCCATATTATCTGTTCCTTC+AGG | 0.363014 | 7_4:+41497757 | None:intergenic |
| ACTTGTTGAGCATATGCATT+TGG | 0.373847 | 7_4:+41498553 | None:intergenic |
| GGAAAGCACAATATGTGAAA+TGG | 0.397390 | 7_4:-41499092 | Msa1154150:CDS |
| ACATTGGCCATGCTCTATTA+GGG | 0.409711 | 7_4:+41500166 | None:intergenic |
| TAGGTTTATGTACATGATCT+TGG | 0.412451 | 7_4:+41500026 | None:intergenic |
| TTGAATCCATTTATATAGAA+AGG | 0.422648 | 7_4:+41499535 | None:intergenic |
| TGAAGTCTCTGAGGTGTTGA+AGG | 0.423185 | 7_4:+41498583 | None:intergenic |
| CTTACAACTCCAATTGCATC+TGG | 0.426201 | 7_4:+41497636 | None:intergenic |
| GAAAGCACAATATGTGAAAT+GGG | 0.430792 | 7_4:-41499091 | Msa1154150:CDS |
| AAGAAAGGAGGGAGTGGAGC+TGG | 0.438177 | 7_4:-41497802 | Msa1154150:CDS |
| CCAAAACACCTAGTGGAGAT+TGG | 0.439901 | 7_4:-41498625 | Msa1154150:CDS |
| GAGGATGCTGAAAAGTATCT+TGG | 0.444822 | 7_4:-41497937 | Msa1154150:CDS |
| TACCAGTTATGCATAATTGT+CGG | 0.445652 | 7_4:-41497442 | Msa1154150:three_prime_UTR |
| TAAATGGATTCAACACATAC+TGG | 0.447247 | 7_4:-41499525 | Msa1154150:CDS |
| TGGCAAATGGTAGGGAAGAA+AGG | 0.450024 | 7_4:-41499583 | Msa1154150:CDS |
| AACATCACCTTTGTTTCCTA+AGG | 0.456186 | 7_4:+41500365 | None:intergenic |
| ACAATCTCAATGAAGAAAAT+GGG | 0.457879 | 7_4:-41500133 | Msa1154150:exon |
| ATAGGATTGGATACAAGAAA+TGG | 0.465459 | 7_4:-41498671 | Msa1154150:intron |
| CTATATGTTGAGTTGTAGCC+AGG | 0.468183 | 7_4:+41497871 | None:intergenic |
| ATCCTAAACTCCACAAAGAA+AGG | 0.469378 | 7_4:-41497817 | Msa1154150:CDS |
| ATATCTCATTTGTAAAATCA+TGG | 0.469699 | 7_4:-41497975 | Msa1154150:CDS |
| TGTGTTCTACCAGATGCAAT+TGG | 0.470041 | 7_4:-41497645 | Msa1154150:CDS |
| GGAAACCAATTTGTGGTGAA+TGG | 0.470394 | 7_4:-41499562 | Msa1154150:CDS |
| ACATGCTTTCTATCTTAAGA+TGG | 0.474372 | 7_4:+41497490 | None:intergenic |
| CTAGTGGAGATTGGACTAGA+AGG | 0.477254 | 7_4:-41498616 | Msa1154150:CDS |
| CAGGAAATACCTGCCACAAA+AGG | 0.479541 | 7_4:+41497776 | None:intergenic |
| CAAAGTCTACACCAAGAACT+TGG | 0.492473 | 7_4:+41498506 | None:intergenic |
| GGTGGATGAAGAGGCACAAA+AGG | 0.507529 | 7_4:-41500053 | Msa1154150:CDS |
| ATAAACCTATCACAAATTAT+GGG | 0.507531 | 7_4:-41500012 | Msa1154150:intron |
| GTGGGATCAGAGTTGCATCT+AGG | 0.510907 | 7_4:+41498796 | None:intergenic |
| AAGGGTTACAATACTTGAAG+TGG | 0.512139 | 7_4:+41497699 | None:intergenic |
| GAAGAAAGGAAACCAATTTG+TGG | 0.515996 | 7_4:-41499569 | Msa1154150:CDS |
| GCCAACAATTGGGAGGCATA+TGG | 0.519304 | 7_4:-41499117 | Msa1154150:intron |
| CTCATTTGTAAAATCATGGA+TGG | 0.524777 | 7_4:-41497971 | Msa1154150:CDS |
| AAGCAAGCCTCGTGGATTGA+AGG | 0.524825 | 7_4:+41497680 | None:intergenic |
| AATGCATATGCTCAACAAGT+TGG | 0.524998 | 7_4:-41498550 | Msa1154150:CDS |
| GGTGTATCATCCAAGGATCC+TGG | 0.525677 | 7_4:-41497889 | Msa1154150:CDS |
| TGAGTTTGGTGTATCATCCA+AGG | 0.526819 | 7_4:-41497896 | Msa1154150:CDS |
| TTTCCTAAGGCACTTTCAAG+TGG | 0.527165 | 7_4:+41500378 | None:intergenic |
| TGAGTTGTAGCCAGGATCCT+TGG | 0.527284 | 7_4:+41497879 | None:intergenic |
| GTGAAATGGGGCAAAGATGC+TGG | 0.528082 | 7_4:-41499078 | Msa1154150:CDS |
| GAGGATGAATGGCAAATGGT+AGG | 0.530896 | 7_4:-41499592 | Msa1154150:CDS |
| TTGTAAGAAGAAGAAAATGT+TGG | 0.531641 | 7_4:-41497620 | Msa1154150:CDS |
| TCCACAAAGAAAGGAGGGAG+TGG | 0.538406 | 7_4:-41497808 | Msa1154150:CDS |
| AACCCACTTGAAAGTGCCTT+AGG | 0.539907 | 7_4:-41500381 | Msa1154150:five_prime_UTR |
| CATCATCAGAGGTCAAGTTA+AGG | 0.540046 | 7_4:+41499055 | None:intergenic |
| ATCAAACTCAGAAGATTAGC+GGG | 0.541385 | 7_4:+41500238 | None:intergenic |
| TTCCTAAGGCACTTTCAAGT+GGG | 0.542936 | 7_4:+41500379 | None:intergenic |
| AACAATTGGGAGGCATATGG+TGG | 0.543604 | 7_4:-41499114 | Msa1154150:intron |
| GGAAGAGGATGAATGGCAAA+TGG | 0.551281 | 7_4:-41499596 | Msa1154150:CDS |
| GATTGTTTACTTGGCCACAT+TGG | 0.552158 | 7_4:+41500150 | None:intergenic |
| AGGATGAATGGCAAATGGTA+GGG | 0.553575 | 7_4:-41499591 | Msa1154150:CDS |
| AGCAAGCCTCGTGGATTGAA+GGG | 0.560648 | 7_4:+41497681 | None:intergenic |
| TAGAACTTAGAATCAAAAGA+AGG | 0.561985 | 7_4:+41500089 | None:intergenic |
| AACCTGTAACTTGTCACCTG+TGG | 0.562152 | 7_4:+41498777 | None:intergenic |
| GCAATGGTTTATACAAGTGA+AGG | 0.562161 | 7_4:+41500328 | None:intergenic |
| CTACACAAATTCAACGTGCA+TGG | 0.563061 | 7_4:+41497526 | None:intergenic |
| CTTCTAGTCCAATCTCCACT+AGG | 0.564151 | 7_4:+41498617 | None:intergenic |
| TTGTGGCAGGTATTTCCTGA+AGG | 0.566518 | 7_4:-41497772 | Msa1154150:CDS |
| ACCTGTAACTTGTCACCTGT+GGG | 0.569730 | 7_4:+41498778 | None:intergenic |
| TATGTCTATAGCTTTACAGT+GGG | 0.572477 | 7_4:+41497554 | None:intergenic |
| GGACTTGTAGTAGCTTCTAA+GGG | 0.576533 | 7_4:+41499014 | None:intergenic |
| AATAATGTGGGACATGGAAG+AGG | 0.582210 | 7_4:-41499611 | Msa1154150:CDS |
| GAAGTCTCTGAGGTGTTGAA+GGG | 0.585049 | 7_4:+41498584 | None:intergenic |
| TTCAAACAAGCATCCTCACT+AGG | 0.590988 | 7_4:-41499451 | Msa1154150:CDS |
| CTAAACTCCACAAAGAAAGG+AGG | 0.591140 | 7_4:-41497814 | Msa1154150:CDS |
| ATGGATGGATGCACACATAG+AGG | 0.592357 | 7_4:-41497956 | Msa1154150:CDS |
| GAGTGAAATAATGTGGGACA+TGG | 0.597084 | 7_4:-41499617 | Msa1154150:CDS |
| GGGACATGGAAGAGGATGAA+TGG | 0.597454 | 7_4:-41499603 | Msa1154150:CDS |
| TGTTAAGGAGTGAAATAATG+TGG | 0.599818 | 7_4:-41499624 | Msa1154150:intron |
| GATGAAGAGGCACAAAAGGA+AGG | 0.602151 | 7_4:-41500049 | Msa1154150:CDS |
| AATTGATCCAAAACACCTAG+TGG | 0.607164 | 7_4:-41498632 | Msa1154150:CDS |
| GTTAAGGAGTGAAATAATGT+GGG | 0.609450 | 7_4:-41499623 | Msa1154150:intron |
| AGATGCAACTCTGATCCCAC+AGG | 0.612987 | 7_4:-41498793 | Msa1154150:CDS |
| TAAACTCCACAAAGAAAGGA+GGG | 0.617337 | 7_4:-41497813 | Msa1154150:CDS |
| GGAACAGATAATATGGATGA+CGG | 0.618901 | 7_4:-41497751 | Msa1154150:CDS |
| GTTACAATACTTGAAGTGGA+AGG | 0.619163 | 7_4:+41497703 | None:intergenic |
| ACAAACTGTCATACCTAGTG+AGG | 0.620363 | 7_4:+41499438 | None:intergenic |
| GATCAAACTCAGAAGATTAG+CGG | 0.621759 | 7_4:+41500237 | None:intergenic |
| GAAAGTGCCTTAGGAAACAA+AGG | 0.626806 | 7_4:-41500372 | Msa1154150:five_prime_UTR |
| TAACATGCCCTAATAGAGCA+TGG | 0.629277 | 7_4:-41500173 | Msa1154150:five_prime_UTR |
| CTAATAGAGCATGGCCAATG+TGG | 0.636265 | 7_4:-41500164 | Msa1154150:five_prime_UTR |
| ATTGCATCTGGTAGAACACA+AGG | 0.641862 | 7_4:+41497648 | None:intergenic |
| ATATGTCTATAGCTTTACAG+TGG | 0.645582 | 7_4:+41497553 | None:intergenic |
| TGAGTAGAAGTCATCATCAG+AGG | 0.649203 | 7_4:+41499044 | None:intergenic |
| ATATGTGTATCAGCAATTTG+TGG | 0.653037 | 7_4:+41497994 | None:intergenic |
| ACAATTGGGAGGCATATGGT+GGG | 0.672246 | 7_4:-41499113 | Msa1154150:intron |
| AAAGCACAATATGTGAAATG+GGG | 0.673517 | 7_4:-41499090 | Msa1154150:CDS |
| GTTGAACAAAGCAAGCCTCG+TGG | 0.681133 | 7_4:+41497672 | None:intergenic |
| AGTCTACACCAAGAACTTGG+TGG | 0.681486 | 7_4:+41498509 | None:intergenic |
| GGATTGAACTGAAGTCTCTG+AGG | 0.686946 | 7_4:+41498574 | None:intergenic |
| GCTGCAGATAACTCCACCAG+AGG | 0.697287 | 7_4:-41499490 | Msa1154150:CDS |
| TTGTAACCCTTCAATCCACG+AGG | 0.744151 | 7_4:-41497687 | Msa1154150:CDS |
| CACCAGAGGAAAAGTCACTG+AGG | 0.767981 | 7_4:-41499476 | Msa1154150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGTTTATTAAAGTA+TGG | - | chr7_4:41497862-41497881 | Msa1154150:CDS | 10.0% |
| !!! | CTATTTATTTATTAACATTT+TGG | - | chr7_4:41499363-41499382 | Msa1154150:intron | 10.0% |
| !! | AAATTAAACTCATTAAGTTA+AGG | + | chr7_4:41498439-41498458 | None:intergenic | 15.0% |
| !! | ATAAACCTATCACAAATTAT+GGG | - | chr7_4:41497761-41497780 | Msa1154150:CDS | 20.0% |
| !! | TATAAAATATAACAGCTAGA+GGG | + | chr7_4:41497799-41497818 | None:intergenic | 20.0% |
| !! | ATATAAAATATAACAGCTAG+AGG | + | chr7_4:41497800-41497819 | None:intergenic | 20.0% |
| !! | TACTAAACTAAAATGATCAT+AGG | + | chr7_4:41497957-41497976 | None:intergenic | 20.0% |
| !!! | CCTTTTGTTTAAAACTTTTT+CGG | - | chr7_4:41498033-41498052 | Msa1154150:intron | 20.0% |
| !!! | AATATTTGATTCAGTTTTCA+AGG | + | chr7_4:41498114-41498133 | None:intergenic | 20.0% |
| !! | TTGAAAACTGAATCAAATAT+TGG | - | chr7_4:41498113-41498132 | Msa1154150:intron | 20.0% |
| !!! | CAAATATTGGTTTTTTGTAA+TGG | - | chr7_4:41498126-41498145 | Msa1154150:intron | 20.0% |
| !! | TTGAATCCATTTATATAGAA+AGG | + | chr7_4:41498241-41498260 | None:intergenic | 20.0% |
| !! | ATTCACAAATATCACTTATA+AGG | - | chr7_4:41498916-41498935 | Msa1154150:intron | 20.0% |
| !! | AGAAAATGTATGTATTACAA+GGG | + | chr7_4:41499389-41499408 | None:intergenic | 20.0% |
| !! | TAGAAAATGTATGTATTACA+AGG | + | chr7_4:41499390-41499409 | None:intergenic | 20.0% |
| !!! | AACAACATTTTCTATGTTTT+AGG | + | chr7_4:41499448-41499467 | None:intergenic | 20.0% |
| !!! | CTTGAAATATTTGTGTATTT+TGG | + | chr7_4:41499540-41499559 | None:intergenic | 20.0% |
| !! | CAAAATACACAAATATTTCA+AGG | - | chr7_4:41499538-41499557 | Msa1154150:CDS | 20.0% |
| !! | AAGACTAAAACTTAAAAAAC+AGG | - | chr7_4:41499607-41499626 | Msa1154150:CDS | 20.0% |
| !! | ATATCTCATTTGTAAAATCA+TGG | - | chr7_4:41499798-41499817 | Msa1154150:intron | 20.0% |
| ! | TATAAACCATTGCTCAAAAA+TGG | - | chr7_4:41497455-41497474 | Msa1154150:three_prime_UTR | 25.0% |
| ! | AACAATCTCAATGAAGAAAA+TGG | - | chr7_4:41497639-41497658 | Msa1154150:CDS | 25.0% |
| ! | ACAATCTCAATGAAGAAAAT+GGG | - | chr7_4:41497640-41497659 | Msa1154150:CDS | 25.0% |
| ! | TAGAACTTAGAATCAAAAGA+AGG | + | chr7_4:41497687-41497706 | None:intergenic | 25.0% |
| !!! | TAAGTTCTAATGCTTTTAGT+AGG | - | chr7_4:41497698-41497717 | Msa1154150:CDS | 25.0% |
| !!! | AAGTTCTAATGCTTTTAGTA+GGG | - | chr7_4:41497699-41497718 | Msa1154150:CDS | 25.0% |
| ! | CATAAACCTATCACAAATTA+TGG | - | chr7_4:41497760-41497779 | Msa1154150:CDS | 25.0% |
| !! | TTTTAAACAAAAGGTTCAGA+AGG | + | chr7_4:41498027-41498046 | None:intergenic | 25.0% |
| !!! | CCGAAAAAGTTTTAAACAAA+AGG | + | chr7_4:41498036-41498055 | None:intergenic | 25.0% |
| ! | TAAAAGAACAAACATACCAT+TGG | + | chr7_4:41498090-41498109 | None:intergenic | 25.0% |
| !!! | GTTTAATTTGTATACACCTT+CGG | - | chr7_4:41498450-41498469 | Msa1154150:intron | 25.0% |
| ! | AAGCAAAGAAATACAAAATC+AGG | - | chr7_4:41498618-41498637 | Msa1154150:CDS | 25.0% |
| ! | AATCAGGCTAATATTATCAT+TGG | - | chr7_4:41498634-41498653 | Msa1154150:CDS | 25.0% |
| ! | GAGTTGTTTACATTTAAGAA+AGG | + | chr7_4:41498801-41498820 | None:intergenic | 25.0% |
| !!! | TTGGATCAATTTTTTTCACA+TGG | + | chr7_4:41499132-41499151 | None:intergenic | 25.0% |
| ! | TTAGGACTAAAACCAAAAAA+AGG | + | chr7_4:41499430-41499449 | None:intergenic | 25.0% |
| ! | AAGGAACTAAAACTAAAACA+AGG | - | chr7_4:41499557-41499576 | Msa1154150:CDS | 25.0% |
| ! | ACTAAAACTTAAAAAACAGG+AGG | - | chr7_4:41499610-41499629 | Msa1154150:CDS | 25.0% |
| ! | CTAAAACTTAAAAAACAGGA+GGG | - | chr7_4:41499611-41499630 | Msa1154150:CDS | 25.0% |
| ! | TGTCTACTTAATAATGTGTT+TGG | - | chr7_4:41499674-41499693 | Msa1154150:intron | 25.0% |
| ! | TTGTAAGAAGAAGAAAATGT+TGG | - | chr7_4:41500153-41500172 | Msa1154150:five_prime_UTR | 25.0% |
| !! | TATGTTCCATTTTTGAGCAA+TGG | + | chr7_4:41497464-41497483 | None:intergenic | 30.0% |
| CTGAGTTTGATCAATTTCTA+TGG | - | chr7_4:41497547-41497566 | Msa1154150:three_prime_UTR | 30.0% | |
| CTTCATTGAGATTGTTTACT+TGG | + | chr7_4:41497635-41497654 | None:intergenic | 30.0% | |
| TAGGTTTATGTACATGATCT+TGG | + | chr7_4:41497750-41497769 | None:intergenic | 30.0% | |
| ! | TCATACCCATAATTTGTGAT+AGG | + | chr7_4:41497769-41497788 | None:intergenic | 30.0% |
| AAACCTCGTACAAAAAAAGT+TGG | + | chr7_4:41497837-41497856 | None:intergenic | 30.0% | |
| !!! | GGTTTTTTGTAATGGTGTTA+AGG | - | chr7_4:41498134-41498153 | Msa1154150:intron | 30.0% |
| TGTTAAGGAGTGAAATAATG+TGG | - | chr7_4:41498149-41498168 | Msa1154150:intron | 30.0% | |
| GTTAAGGAGTGAAATAATGT+GGG | - | chr7_4:41498150-41498169 | Msa1154150:intron | 30.0% | |
| ! | TAAATGGATTCAACACATAC+TGG | - | chr7_4:41498248-41498267 | Msa1154150:intron | 30.0% |
| ! | AATGCAAAACTTTTTACCGA+AGG | + | chr7_4:41498469-41498488 | None:intergenic | 30.0% |
| TGATTGATTGTGATGTGATT+TGG | + | chr7_4:41498496-41498515 | None:intergenic | 30.0% | |
| CAAACGTTTGAATTATTCGA+CGG | - | chr7_4:41498550-41498569 | Msa1154150:CDS | 30.0% | |
| TTTGAATTATTCGACGGTTA+TGG | - | chr7_4:41498556-41498575 | Msa1154150:CDS | 30.0% | |
| TATTATCATTGGCCAACAAT+TGG | - | chr7_4:41498645-41498664 | Msa1154150:CDS | 30.0% | |
| ATTATCATTGGCCAACAATT+GGG | - | chr7_4:41498646-41498665 | Msa1154150:CDS | 30.0% | |
| ! | GAAAGCACAATATGTGAAAT+GGG | - | chr7_4:41498682-41498701 | Msa1154150:intron | 30.0% |
| AAAGCACAATATGTGAAATG+GGG | - | chr7_4:41498683-41498702 | Msa1154150:intron | 30.0% | |
| !! | AGCTTTCAAGTAAGCAATTT+TGG | + | chr7_4:41498828-41498847 | None:intergenic | 30.0% |
| TATCCAGAAGAAGTTTACTA+GGG | + | chr7_4:41499025-41499044 | None:intergenic | 30.0% | |
| ATATCCAGAAGAAGTTTACT+AGG | + | chr7_4:41499026-41499045 | None:intergenic | 30.0% | |
| CACTTGTGAATGTACAATAT+AGG | - | chr7_4:41499084-41499103 | Msa1154150:CDS | 30.0% | |
| GTGAATGTACAATATAGGAT+TGG | - | chr7_4:41499089-41499108 | Msa1154150:CDS | 30.0% | |
| ATAGGATTGGATACAAGAAA+TGG | - | chr7_4:41499102-41499121 | Msa1154150:CDS | 30.0% | |
| !! | ATTGGACTAGAAGGATTTTA+TGG | - | chr7_4:41499166-41499185 | Msa1154150:intron | 30.0% |
| ACCAAAAAAAGGAAGAATGA+GGG | + | chr7_4:41499419-41499438 | None:intergenic | 30.0% | |
| AACCAAAAAAAGGAAGAATG+AGG | + | chr7_4:41499420-41499439 | None:intergenic | 30.0% | |
| ATTAAGTAGACAAATAGTGC+TGG | + | chr7_4:41499666-41499685 | None:intergenic | 30.0% | |
| ! | AAGTCAATGATCTTGTTTGA+AGG | - | chr7_4:41499750-41499769 | Msa1154150:intron | 30.0% |
| ! | AGTCAATGATCTTGTTTGAA+GGG | - | chr7_4:41499751-41499770 | Msa1154150:intron | 30.0% |
| ATATGTGTATCAGCAATTTG+TGG | + | chr7_4:41499782-41499801 | None:intergenic | 30.0% | |
| CTCATTTGTAAAATCATGGA+TGG | - | chr7_4:41499802-41499821 | Msa1154150:intron | 30.0% | |
| ! | TATGTCTATAGCTTTACAGT+GGG | + | chr7_4:41500222-41500241 | None:intergenic | 30.0% |
| ! | ATATGTCTATAGCTTTACAG+TGG | + | chr7_4:41500223-41500242 | None:intergenic | 30.0% |
| ACATGCTTTCTATCTTAAGA+TGG | + | chr7_4:41500286-41500305 | None:intergenic | 30.0% | |
| TACCAGTTATGCATAATTGT+CGG | - | chr7_4:41500331-41500350 | Msa1154150:five_prime_UTR | 30.0% | |
| ! | AACATCACCTTTGTTTCCTA+AGG | + | chr7_4:41497411-41497430 | None:intergenic | 35.0% |
| GCAATGGTTTATACAAGTGA+AGG | + | chr7_4:41497448-41497467 | None:intergenic | 35.0% | |
| ATCAAACTCAGAAGATTAGC+GGG | + | chr7_4:41497538-41497557 | None:intergenic | 35.0% | |
| GATCAAACTCAGAAGATTAG+CGG | + | chr7_4:41497539-41497558 | None:intergenic | 35.0% | |
| ! | TTCTAATGCTTTTAGTAGGG+TGG | - | chr7_4:41497702-41497721 | Msa1154150:CDS | 35.0% |
| ! | ACAAAAAAAGTTGGTCTGGT+TGG | + | chr7_4:41497828-41497847 | None:intergenic | 35.0% |
| ! | TCGTACAAAAAAAGTTGGTC+TGG | + | chr7_4:41497832-41497851 | None:intergenic | 35.0% |
| !!! | AGACCAACTTTTTTTGTACG+AGG | - | chr7_4:41497831-41497850 | Msa1154150:CDS | 35.0% |
| GAAGAAAGGAAACCAATTTG+TGG | - | chr7_4:41498204-41498223 | Msa1154150:intron | 35.0% | |
| GGTCAGCCTTTCTATATAAA+TGG | - | chr7_4:41498232-41498251 | Msa1154150:intron | 35.0% | |
| TATGACAGTTTGTAGGACTT+GGG | - | chr7_4:41498345-41498364 | Msa1154150:intron | 35.0% | |
| TTATGACGAAGAAGTCTTCA+AGG | - | chr7_4:41498409-41498428 | Msa1154150:intron | 35.0% | |
| TATGGTTATGATTGATCTGC+AGG | - | chr7_4:41498574-41498593 | Msa1154150:CDS | 35.0% | |
| ! | GGAAAGCACAATATGTGAAA+TGG | - | chr7_4:41498681-41498700 | Msa1154150:intron | 35.0% |
| AAAGGAACTTGCCTTAACAT+GGG | + | chr7_4:41498783-41498802 | None:intergenic | 35.0% | |
| TGCTTACTTGAAAGCTTGAT+TGG | - | chr7_4:41498832-41498851 | Msa1154150:CDS | 35.0% | |
| !! | AAGATCCTACCATTTTTGCT+TGG | - | chr7_4:41498939-41498958 | Msa1154150:intron | 35.0% |
| !! | AGATCCTACCATTTTTGCTT+GGG | - | chr7_4:41498940-41498959 | Msa1154150:intron | 35.0% |
| ATCCAGAAGAAGTTTACTAG+GGG | + | chr7_4:41499024-41499043 | None:intergenic | 35.0% | |
| AATTGATCCAAAACACCTAG+TGG | - | chr7_4:41499141-41499160 | Msa1154150:intron | 35.0% | |
| ! | ACTTGTTGAGCATATGCATT+TGG | + | chr7_4:41499223-41499242 | None:intergenic | 35.0% |
| AATGCATATGCTCAACAAGT+TGG | - | chr7_4:41499223-41499242 | Msa1154150:intron | 35.0% | |
| ! | AAGTTGGAACTGACTTTATC+AGG | - | chr7_4:41499239-41499258 | Msa1154150:intron | 35.0% |
| CCAAAAAAAGGAAGAATGAG+GGG | + | chr7_4:41499418-41499437 | None:intergenic | 35.0% | |
| GAATCAGTTGCTGTAATATG+TGG | + | chr7_4:41499518-41499537 | None:intergenic | 35.0% | |
| GTTGCACTATTCATGTCAAA+AGG | + | chr7_4:41499719-41499738 | None:intergenic | 35.0% | |
| CCAAACTCAGAAAAAACAAC+TGG | + | chr7_4:41499866-41499885 | None:intergenic | 35.0% | |
| !!! | CCAGTTGTTTTTTCTGAGTT+TGG | - | chr7_4:41499863-41499882 | Msa1154150:intron | 35.0% |
| ATCCTAAACTCCACAAAGAA+AGG | - | chr7_4:41499956-41499975 | Msa1154150:intron | 35.0% | |
| TAAACTCCACAAAGAAAGGA+GGG | - | chr7_4:41499960-41499979 | Msa1154150:intron | 35.0% | |
| TCCTGAAGGAACAGATAATA+TGG | - | chr7_4:41500015-41500034 | Msa1154150:CDS | 35.0% | |
| TCCATATTATCTGTTCCTTC+AGG | + | chr7_4:41500019-41500038 | None:intergenic | 35.0% | |
| GGAACAGATAATATGGATGA+CGG | - | chr7_4:41500022-41500041 | Msa1154150:CDS | 35.0% | |
| GTTACAATACTTGAAGTGGA+AGG | + | chr7_4:41500073-41500092 | None:intergenic | 35.0% | |
| AAGGGTTACAATACTTGAAG+TGG | + | chr7_4:41500077-41500096 | None:intergenic | 35.0% | |
| TTCCGACAATTATGCATAAC+TGG | + | chr7_4:41500336-41500355 | None:intergenic | 35.0% | |
| ! | TTCCTAAGGCACTTTCAAGT+GGG | + | chr7_4:41497397-41497416 | None:intergenic | 40.0% |
| ! | TTTCCTAAGGCACTTTCAAG+TGG | + | chr7_4:41497398-41497417 | None:intergenic | 40.0% |
| !! | GAAAGTGCCTTAGGAAACAA+AGG | - | chr7_4:41497401-41497420 | Msa1154150:three_prime_UTR | 40.0% |
| TAACATGCCCTAATAGAGCA+TGG | - | chr7_4:41497600-41497619 | Msa1154150:CDS | 40.0% | |
| ACATTGGCCATGCTCTATTA+GGG | + | chr7_4:41497610-41497629 | None:intergenic | 40.0% | |
| GATTGTTTACTTGGCCACAT+TGG | + | chr7_4:41497626-41497645 | None:intergenic | 40.0% | |
| ! | TTTTAGTAGGGTGGATGAAG+AGG | - | chr7_4:41497711-41497730 | Msa1154150:CDS | 40.0% |
| !!! | TTTTTCGGTGTCGTTTAGCT+CGG | - | chr7_4:41498048-41498067 | Msa1154150:intron | 40.0% |
| AACAAACATACCATTGGCCA+CGG | + | chr7_4:41498084-41498103 | None:intergenic | 40.0% | |
| GAGTGAAATAATGTGGGACA+TGG | - | chr7_4:41498156-41498175 | Msa1154150:intron | 40.0% | |
| AATAATGTGGGACATGGAAG+AGG | - | chr7_4:41498162-41498181 | Msa1154150:intron | 40.0% | |
| AGGATGAATGGCAAATGGTA+GGG | - | chr7_4:41498182-41498201 | Msa1154150:intron | 40.0% | |
| GGAAACCAATTTGTGGTGAA+TGG | - | chr7_4:41498211-41498230 | Msa1154150:intron | 40.0% | |
| TTCAAACAAGCATCCTCACT+AGG | - | chr7_4:41498322-41498341 | Msa1154150:intron | 40.0% | |
| ACAAACTGTCATACCTAGTG+AGG | + | chr7_4:41498338-41498357 | None:intergenic | 40.0% | |
| CACTAGGTATGACAGTTTGT+AGG | - | chr7_4:41498338-41498357 | Msa1154150:intron | 40.0% | |
| GTATGACAGTTTGTAGGACT+TGG | - | chr7_4:41498344-41498363 | Msa1154150:intron | 40.0% | |
| TTCTTCGTCATAAACCGAAG+GGG | + | chr7_4:41498402-41498421 | None:intergenic | 40.0% | |
| CTTCTTCGTCATAAACCGAA+GGG | + | chr7_4:41498403-41498422 | None:intergenic | 40.0% | |
| ACTTCTTCGTCATAAACCGA+AGG | + | chr7_4:41498404-41498423 | None:intergenic | 40.0% | |
| TTCACTTACCACAAAGTCCA+AGG | + | chr7_4:41498600-41498619 | None:intergenic | 40.0% | |
| CATCATCAGAGGTCAAGTTA+AGG | + | chr7_4:41498721-41498740 | None:intergenic | 40.0% | |
| TGAGTAGAAGTCATCATCAG+AGG | + | chr7_4:41498732-41498751 | None:intergenic | 40.0% | |
| GGACTTGTAGTAGCTTCTAA+GGG | + | chr7_4:41498762-41498781 | None:intergenic | 40.0% | |
| CTACTACAAGTCCCATGTTA+AGG | - | chr7_4:41498769-41498788 | Msa1154150:intron | 40.0% | |
| GAAAGGAACTTGCCTTAACA+TGG | + | chr7_4:41498784-41498803 | None:intergenic | 40.0% | |
| AGTTCCCAAGCAAAAATGGT+AGG | + | chr7_4:41498947-41498966 | None:intergenic | 40.0% | |
| CATCAGTTCCCAAGCAAAAA+TGG | + | chr7_4:41498951-41498970 | None:intergenic | 40.0% | |
| CAAAGTCTACACCAAGAACT+TGG | + | chr7_4:41499270-41499289 | None:intergenic | 40.0% | |
| !! | TTCACATGTATGCTGACTCT+TGG | - | chr7_4:41499296-41499315 | Msa1154150:intron | 40.0% |
| !!! | CCCCTCATTCTTCCTTTTTT+TGG | - | chr7_4:41499415-41499434 | Msa1154150:intron | 40.0% |
| !! | GAGGATGCTGAAAAGTATCT+TGG | - | chr7_4:41499836-41499855 | Msa1154150:intron | 40.0% |
| !! | TGAGTTTGGTGTATCATCCA+AGG | - | chr7_4:41499877-41499896 | Msa1154150:intron | 40.0% |
| ! | CTATATGTTGAGTTGTAGCC+AGG | + | chr7_4:41499905-41499924 | None:intergenic | 40.0% |
| CTCCTTTCTTTGTGGAGTTT+AGG | + | chr7_4:41499961-41499980 | None:intergenic | 40.0% | |
| CTAAACTCCACAAAGAAAGG+AGG | - | chr7_4:41499959-41499978 | Msa1154150:intron | 40.0% | |
| ATTGCATCTGGTAGAACACA+AGG | + | chr7_4:41500128-41500147 | None:intergenic | 40.0% | |
| TGTGTTCTACCAGATGCAAT+TGG | - | chr7_4:41500128-41500147 | Msa1154150:exon | 40.0% | |
| CTTACAACTCCAATTGCATC+TGG | + | chr7_4:41500140-41500159 | None:intergenic | 40.0% | |
| CTACACAAATTCAACGTGCA+TGG | + | chr7_4:41500250-41500269 | None:intergenic | 40.0% | |
| !! | AACCCACTTGAAAGTGCCTT+AGG | - | chr7_4:41497392-41497411 | Msa1154150:three_prime_UTR | 45.0% |
| CACATTGGCCATGCTCTATT+AGG | + | chr7_4:41497611-41497630 | None:intergenic | 45.0% | |
| CTAATAGAGCATGGCCAATG+TGG | - | chr7_4:41497609-41497628 | Msa1154150:CDS | 45.0% | |
| ! | GATGAAGAGGCACAAAAGGA+AGG | - | chr7_4:41497724-41497743 | Msa1154150:CDS | 45.0% |
| GGAAGAGGATGAATGGCAAA+TGG | - | chr7_4:41498177-41498196 | Msa1154150:intron | 45.0% | |
| GAGGATGAATGGCAAATGGT+AGG | - | chr7_4:41498181-41498200 | Msa1154150:intron | 45.0% | |
| TGGCAAATGGTAGGGAAGAA+AGG | - | chr7_4:41498190-41498209 | Msa1154150:intron | 45.0% | |
| GCTGACCATTCACCACAAAT+TGG | + | chr7_4:41498219-41498238 | None:intergenic | 45.0% | |
| ! | AACCTCAGTGACTTTTCCTC+TGG | + | chr7_4:41498302-41498321 | None:intergenic | 45.0% |
| AGGACTTGGGCTTTCAATGA+TGG | - | chr7_4:41498358-41498377 | Msa1154150:intron | 45.0% | |
| AACCGAAGGGGATTTCTGTA+GGG | + | chr7_4:41498390-41498409 | None:intergenic | 45.0% | |
| AAACCGAAGGGGATTTCTGT+AGG | + | chr7_4:41498391-41498410 | None:intergenic | 45.0% | |
| TATGATTGATCTGCAGGCCT+TGG | - | chr7_4:41498580-41498599 | Msa1154150:CDS | 45.0% | |
| ATCATTGGCCAACAATTGGG+AGG | - | chr7_4:41498649-41498668 | Msa1154150:CDS | 45.0% | |
| ACCATATGCCTCCCAATTGT+TGG | + | chr7_4:41498660-41498679 | None:intergenic | 45.0% | |
| ! | AACAATTGGGAGGCATATGG+TGG | - | chr7_4:41498659-41498678 | Msa1154150:CDS | 45.0% |
| ! | ACAATTGGGAGGCATATGGT+GGG | - | chr7_4:41498660-41498679 | Msa1154150:CDS | 45.0% |
| GGGACTTGTAGTAGCTTCTA+AGG | + | chr7_4:41498763-41498782 | None:intergenic | 45.0% | |
| ! | ACCTGTAACTTGTCACCTGT+GGG | + | chr7_4:41498998-41499017 | None:intergenic | 45.0% |
| ! | AACCTGTAACTTGTCACCTG+TGG | + | chr7_4:41498999-41499018 | None:intergenic | 45.0% |
| TGCCCCTAGTAAACTTCTTC+TGG | - | chr7_4:41499019-41499038 | Msa1154150:CDS | 45.0% | |
| ! | CCAATCTCCACTAGGTGTTT+TGG | + | chr7_4:41499151-41499170 | None:intergenic | 45.0% |
| CCAAAACACCTAGTGGAGAT+TGG | - | chr7_4:41499148-41499167 | Msa1154150:intron | 45.0% | |
| CTTCTAGTCCAATCTCCACT+AGG | + | chr7_4:41499159-41499178 | None:intergenic | 45.0% | |
| ! | CTAGTGGAGATTGGACTAGA+AGG | - | chr7_4:41499157-41499176 | Msa1154150:intron | 45.0% |
| !! | GAAGTCTCTGAGGTGTTGAA+GGG | + | chr7_4:41499192-41499211 | None:intergenic | 45.0% |
| !! | TGAAGTCTCTGAGGTGTTGA+AGG | + | chr7_4:41499193-41499212 | None:intergenic | 45.0% |
| GGATTGAACTGAAGTCTCTG+AGG | + | chr7_4:41499202-41499221 | None:intergenic | 45.0% | |
| ATCAGGAACCACCAAGTTCT+TGG | - | chr7_4:41499256-41499275 | Msa1154150:intron | 45.0% | |
| AGTCTACACCAAGAACTTGG+TGG | + | chr7_4:41499267-41499286 | None:intergenic | 45.0% | |
| ATGGATGGATGCACACATAG+AGG | - | chr7_4:41499817-41499836 | Msa1154150:intron | 45.0% | |
| CAGGAAATACCTGCCACAAA+AGG | + | chr7_4:41500000-41500019 | None:intergenic | 45.0% | |
| TTGTGGCAGGTATTTCCTGA+AGG | - | chr7_4:41500001-41500020 | Msa1154150:intron | 45.0% | |
| TTGTAACCCTTCAATCCACG+AGG | - | chr7_4:41500086-41500105 | Msa1154150:CDS | 45.0% | |
| !!! | ATTTTTCATTATTTTTAAAT+TGG | - | chr7_4:41497885-41497904 | Msa1154150:CDS | 5.0% |
| ! | GGTGGATGAAGAGGCACAAA+AGG | - | chr7_4:41497720-41497739 | Msa1154150:CDS | 50.0% |
| !! | GTGTCGTTTAGCTCGGTGTT+CGG | - | chr7_4:41498055-41498074 | Msa1154150:intron | 50.0% |
| GGGACATGGAAGAGGATGAA+TGG | - | chr7_4:41498170-41498189 | Msa1154150:intron | 50.0% | |
| ! | CTCAGTGACTTTTCCTCTGG+TGG | + | chr7_4:41498299-41498318 | None:intergenic | 50.0% |
| CACCAGAGGAAAAGTCACTG+AGG | - | chr7_4:41498297-41498316 | Msa1154150:intron | 50.0% | |
| TTGGGCTTTCAATGATGGCC+AGG | - | chr7_4:41498363-41498382 | Msa1154150:intron | 50.0% | |
| TGGGCTTTCAATGATGGCCA+GGG | - | chr7_4:41498364-41498383 | Msa1154150:intron | 50.0% | |
| ! | GCCAACAATTGGGAGGCATA+TGG | - | chr7_4:41498656-41498675 | Msa1154150:CDS | 50.0% |
| GTGAAATGGGGCAAAGATGC+TGG | - | chr7_4:41498695-41498714 | Msa1154150:intron | 50.0% | |
| GTGGGATCAGAGTTGCATCT+AGG | + | chr7_4:41498980-41498999 | None:intergenic | 50.0% | |
| AGATGCAACTCTGATCCCAC+AGG | - | chr7_4:41498980-41498999 | Msa1154150:intron | 50.0% | |
| TCCCACAGGTGACAAGTTAC+AGG | - | chr7_4:41498994-41499013 | Msa1154150:intron | 50.0% | |
| GGTGTATCATCCAAGGATCC+TGG | - | chr7_4:41499884-41499903 | Msa1154150:intron | 50.0% | |
| TGAGTTGTAGCCAGGATCCT+TGG | + | chr7_4:41499897-41499916 | None:intergenic | 50.0% | |
| TCCACAAAGAAAGGAGGGAG+TGG | - | chr7_4:41499965-41499984 | Msa1154150:intron | 50.0% | |
| TCCACTCCCTCCTTTCTTTG+TGG | + | chr7_4:41499969-41499988 | None:intergenic | 50.0% | |
| ! | AGCAAGCCTCGTGGATTGAA+GGG | + | chr7_4:41500095-41500114 | None:intergenic | 50.0% |
| ! | AAGCAAGCCTCGTGGATTGA+AGG | + | chr7_4:41500096-41500115 | None:intergenic | 50.0% |
| GTTGAACAAAGCAAGCCTCG+TGG | + | chr7_4:41500104-41500123 | None:intergenic | 50.0% | |
| TGTTCGGTAACCGTGGCCAA+TGG | - | chr7_4:41498071-41498090 | Msa1154150:intron | 55.0% | |
| GCTGCAGATAACTCCACCAG+AGG | - | chr7_4:41498283-41498302 | Msa1154150:intron | 55.0% | |
| GGCCCTACAGAAATCCCCTT+CGG | - | chr7_4:41498385-41498404 | Msa1154150:intron | 55.0% | |
| TCTGCAGGCCTTGGACTTTG+TGG | - | chr7_4:41498589-41498608 | Msa1154150:CDS | 55.0% | |
| AAGAAAGGAGGGAGTGGAGC+TGG | - | chr7_4:41499971-41499990 | Msa1154150:intron | 55.0% | |
| ! | GTGGAGCTGGAAGCCTTTTG+TGG | - | chr7_4:41499984-41500003 | Msa1154150:intron | 55.0% |
| ! | AGCTGGAAGCCTTTTGTGGC+AGG | - | chr7_4:41499988-41500007 | Msa1154150:intron | 55.0% |
| !! | AGCTCGGTGTTCGGTAACCG+TGG | - | chr7_4:41498064-41498083 | Msa1154150:intron | 60.0% |
| AGGGGATTTCTGTAGGGCCC+TGG | + | chr7_4:41498384-41498403 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 41497387 | 41500408 | 41497387 | ID=Msa1154150;Name=Msa1154150 |
| chr7_4 | mRNA | 41497387 | 41500408 | 41497387 | ID=Msa1154150-mRNA-1;Parent=Msa1154150;Name=Msa1154150-mRNA-1;_AED=0.15;_eAED=0.15;_QI=262|0.4|0.5|1|0.8|1|6|204|398 |
| chr7_4 | exon | 41497387 | 41498023 | 41497387 | ID=Msa1154150-mRNA-1:exon:10110;Parent=Msa1154150-mRNA-1 |
| chr7_4 | exon | 41498493 | 41498689 | 41498493 | ID=Msa1154150-mRNA-1:exon:10109;Parent=Msa1154150-mRNA-1 |
| chr7_4 | exon | 41498780 | 41498902 | 41498780 | ID=Msa1154150-mRNA-1:exon:10108;Parent=Msa1154150-mRNA-1 |
| chr7_4 | exon | 41499011 | 41499124 | 41499011 | ID=Msa1154150-mRNA-1:exon:10107;Parent=Msa1154150-mRNA-1 |
| chr7_4 | exon | 41499444 | 41499639 | 41499444 | ID=Msa1154150-mRNA-1:exon:10106;Parent=Msa1154150-mRNA-1 |
| chr7_4 | exon | 41500013 | 41500408 | 41500013 | ID=Msa1154150-mRNA-1:exon:10105;Parent=Msa1154150-mRNA-1 |
| chr7_4 | five_prime_UTR | 41500147 | 41500408 | 41500147 | ID=Msa1154150-mRNA-1:five_prime_utr;Parent=Msa1154150-mRNA-1 |
| chr7_4 | CDS | 41500013 | 41500146 | 41500013 | ID=Msa1154150-mRNA-1:cds;Parent=Msa1154150-mRNA-1 |
| chr7_4 | CDS | 41499444 | 41499639 | 41499444 | ID=Msa1154150-mRNA-1:cds;Parent=Msa1154150-mRNA-1 |
| chr7_4 | CDS | 41499011 | 41499124 | 41499011 | ID=Msa1154150-mRNA-1:cds;Parent=Msa1154150-mRNA-1 |
| chr7_4 | CDS | 41498780 | 41498902 | 41498780 | ID=Msa1154150-mRNA-1:cds;Parent=Msa1154150-mRNA-1 |
| chr7_4 | CDS | 41498493 | 41498689 | 41498493 | ID=Msa1154150-mRNA-1:cds;Parent=Msa1154150-mRNA-1 |
| chr7_4 | CDS | 41497591 | 41498023 | 41497591 | ID=Msa1154150-mRNA-1:cds;Parent=Msa1154150-mRNA-1 |
| chr7_4 | three_prime_UTR | 41497387 | 41497590 | 41497387 | ID=Msa1154150-mRNA-1:three_prime_utr;Parent=Msa1154150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
