Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075760 | XP_024626502.1 | 95.652 | 851 | 36 | 1 | 1 | 851 | 1 | 850 | 0.0 | 1659 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075760 | sp|Q8L735|ISOA2_ARATH | 55.865 | 827 | 328 | 11 | 53 | 854 | 67 | 881 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075760 | A0A396H443 | 95.652 | 851 | 36 | 1 | 1 | 851 | 1 | 850 | 0.0 | 1659 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0175800 | Msa1075760 | 0.808912 | 2.452861e-50 | -8.615850e-47 |
| Msa1075760 | Msa1209560 | 0.828583 | 8.293211e-55 | -8.615850e-47 |
| Msa1075760 | Msa1246040 | 0.813055 | 3.106922e-51 | -8.615850e-47 |
| Msa1075760 | Msa1330530 | 0.808643 | 2.800261e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075760 | MtrunA17_Chr7g0259581 | 95.652 | 851 | 36 | 1 | 1 | 851 | 1 | 850 | 0.0 | 1659 |
| Msa1075760 | MtrunA17_Chr3g0132391 | 36.805 | 701 | 355 | 22 | 208 | 850 | 105 | 775 | 1.13e-124 | 394 |
| Msa1075760 | MtrunA17_Chr8g0389131 | 32.466 | 730 | 384 | 28 | 203 | 848 | 76 | 780 | 9.88e-96 | 317 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1075760 | AT1G03310.2 | 55.865 | 827 | 328 | 11 | 53 | 854 | 67 | 881 | 0.0 | 895 |
| Msa1075760 | AT1G03310.1 | 55.865 | 827 | 328 | 11 | 53 | 854 | 67 | 881 | 0.0 | 895 |
| Msa1075760 | AT4G09020.1 | 37.800 | 709 | 338 | 26 | 208 | 850 | 92 | 763 | 1.06e-126 | 399 |
| Msa1075760 | AT2G39930.1 | 32.314 | 687 | 372 | 20 | 204 | 817 | 72 | 738 | 1.69e-96 | 320 |
| Msa1075760 | AT2G39930.2 | 34.595 | 555 | 288 | 14 | 204 | 688 | 72 | 621 | 7.47e-90 | 299 |
| Msa1075760 | AT2G39930.3 | 33.832 | 535 | 279 | 14 | 204 | 668 | 72 | 601 | 1.46e-81 | 276 |
Find 175 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATGCAAAATTTGATTT+TGG | 0.165791 | 7_2:+74208007 | Msa1075760:CDS |
| ATTGGTTGTGATGCTTAATT+TGG | 0.185870 | 7_2:-74206642 | None:intergenic |
| TTTCACATTTGATGAGAAAA+AGG | 0.189064 | 7_2:+74207731 | Msa1075760:CDS |
| TGATGATTATCATCCGAATT+TGG | 0.233226 | 7_2:+74207548 | Msa1075760:CDS |
| ACCCTTCAATTGGGCTGCTT+TGG | 0.264086 | 7_2:+74208643 | Msa1075760:CDS |
| TCAATAAGTCAGGTGATATT+TGG | 0.271942 | 7_2:+74207331 | Msa1075760:CDS |
| CATCATTGTCTTATTTGTTT+AGG | 0.284436 | 7_2:+74206809 | Msa1075760:CDS |
| TTCTCATCAAATGTGAAAAC+TGG | 0.289834 | 7_2:-74207726 | None:intergenic |
| AATTACATTGCCGGGAATTT+CGG | 0.292068 | 7_2:+74208389 | Msa1075760:CDS |
| TCTGCATCTTCTGATATATT+AGG | 0.296392 | 7_2:+74208878 | Msa1075760:CDS |
| TTCTCTCCAATGAACCTTTA+CGG | 0.297603 | 7_2:+74207777 | Msa1075760:CDS |
| TTTGTGTTGGGGTTTGTATA+GGG | 0.303946 | 7_2:+74206948 | Msa1075760:CDS |
| AATTGGGCTGCTTTGGAAAC+AGG | 0.304640 | 7_2:+74208650 | Msa1075760:CDS |
| TCGTCTCCCATGTTCAAAAT+AGG | 0.317484 | 7_2:-74208575 | None:intergenic |
| GACGAGTGTGGTCACTCTTC+TGG | 0.320944 | 7_2:+74208593 | Msa1075760:CDS |
| TAGGGATGATTCATCAAGTT+TGG | 0.324297 | 7_2:+74206966 | Msa1075760:CDS |
| GTCCCACCTGAGCAAATATC+AGG | 0.327860 | 7_2:+74209040 | Msa1075760:CDS |
| CATTTGTTGAGAGGGTTTCA+TGG | 0.328728 | 7_2:+74208092 | Msa1075760:CDS |
| CTTCAGCATAACTGTTATTC+CGG | 0.330854 | 7_2:-74207416 | None:intergenic |
| AGTTTCTCCATTTCCAAATT+CGG | 0.335827 | 7_2:-74207561 | None:intergenic |
| TCCTTTGGTTCCATGTCATT+AGG | 0.337801 | 7_2:-74208203 | None:intergenic |
| CGGTACCATGACATCCCTTC+TGG | 0.340417 | 7_2:-74208962 | None:intergenic |
| CGGGGTCTCCCGGATCCGTT+GGG | 0.344058 | 7_2:+74207168 | Msa1075760:CDS |
| TATTTGTTTAGGACAGAAAT+TGG | 0.346975 | 7_2:+74206820 | Msa1075760:CDS |
| TTGTCTTATTATTATGCAAA+TGG | 0.352345 | 7_2:+74207939 | Msa1075760:CDS |
| AGGAGACTCGCTTTCCTCAT+TGG | 0.352644 | 7_2:+74208222 | Msa1075760:CDS |
| CATGAATCGAGTCAACTTTC+CGG | 0.353362 | 7_2:+74207621 | Msa1075760:CDS |
| ATTGCAGCACTTTAAAGATC+TGG | 0.356461 | 7_2:+74207680 | Msa1075760:CDS |
| CGTTCTCAAGGAAGTCAAAA+AGG | 0.358263 | 7_2:-74208702 | None:intergenic |
| TCTGGTGGTTCTTCTGCATA+TGG | 0.361427 | 7_2:+74208611 | Msa1075760:CDS |
| GTAACTGAGTTTCACATTGA+TGG | 0.362118 | 7_2:+74208047 | Msa1075760:CDS |
| GACCCTTATGCTAGAATTGT+TGG | 0.364546 | 7_2:+74207450 | Msa1075760:CDS |
| GCTGCTTTGGAAACAGGTTT+TGG | 0.365473 | 7_2:+74208656 | Msa1075760:CDS |
| GACAGAAATTGGTGAAGGTT+TGG | 0.368719 | 7_2:+74206831 | Msa1075760:CDS |
| TTCATCTTATTTGTGTCATT+AGG | 0.370601 | 7_2:+74208548 | Msa1075760:CDS |
| AACATTTGGTTTCATATTTG+TGG | 0.371235 | 7_2:-74206612 | None:intergenic |
| GTGACACAAAACCCTTCAAT+TGG | 0.371316 | 7_2:+74208633 | Msa1075760:CDS |
| CTAAAATCATTGCAGATTGC+TGG | 0.377038 | 7_2:+74208177 | Msa1075760:CDS |
| CAGGATGGATCTTCCCATCT+TGG | 0.378241 | 7_2:-74208803 | None:intergenic |
| TTCCCAACAATTCTAGCATA+AGG | 0.384297 | 7_2:-74207453 | None:intergenic |
| AATTTGGGTAAAGGAACATT+TGG | 0.388315 | 7_2:-74206626 | None:intergenic |
| ATGACACAAATAAGATGAAT+AGG | 0.394648 | 7_2:-74208544 | None:intergenic |
| ATAGAGTTTACAGTAGATAC+AGG | 0.399425 | 7_2:-74207813 | None:intergenic |
| TCGGGGTCTCCCGGATCCGT+TGG | 0.403471 | 7_2:+74207167 | Msa1075760:CDS |
| CAACTTTCCGGTGATTTAGC+TGG | 0.404310 | 7_2:+74207633 | Msa1075760:CDS |
| TGAAGTGTGATTATGAGAAA+AGG | 0.415137 | 7_2:-74206698 | None:intergenic |
| TTTGGATAGCCTTAGGCATT+GGG | 0.416125 | 7_2:+74208025 | Msa1075760:CDS |
| GCTTTCCTCATTGGATGAGA+TGG | 0.416151 | 7_2:+74208231 | Msa1075760:CDS |
| TGAGGAAAGCGAGTCTCCTT+TGG | 0.416314 | 7_2:-74208218 | None:intergenic |
| GAAGTGTGATTATGAGAAAA+GGG | 0.416909 | 7_2:-74206697 | None:intergenic |
| GCTGAGACTGGTGCTCTTCA+AGG | 0.419606 | 7_2:+74207906 | Msa1075760:CDS |
| ATAAGATGAATAGGAAATTA+CGG | 0.427124 | 7_2:-74208535 | None:intergenic |
| GCTGTAAGACTTCATTTCAT+AGG | 0.431640 | 7_2:-74209071 | None:intergenic |
| TTATGCTGAAGGTGTTGTTT+TGG | 0.431716 | 7_2:+74207428 | Msa1075760:CDS |
| TATTATTATGCAAATGGGAT+TGG | 0.432030 | 7_2:+74207945 | Msa1075760:CDS |
| TCAAGTTTGGATGATGGAAA+AGG | 0.432828 | 7_2:+74206979 | Msa1075760:CDS |
| TGGAGAAACTAGTGGTGTAT+AGG | 0.432865 | 7_2:+74207574 | Msa1075760:CDS |
| TTACAGCTGCACTTTGTTTG+AGG | 0.435027 | 7_2:+74209087 | Msa1075760:CDS |
| AATTGGTGAAGGTTTGGTTA+AGG | 0.438891 | 7_2:+74206837 | Msa1075760:CDS |
| TTATCATCCGAATTTGGAAA+TGG | 0.441003 | 7_2:+74207554 | Msa1075760:CDS |
| CAATGGGATAGAAGTTATAA+TGG | 0.441769 | 7_2:+74207863 | Msa1075760:CDS |
| AAGAGAAAGTCCGAAATTCC+CGG | 0.442344 | 7_2:-74208399 | None:intergenic |
| AGTCATGGCCAGGAACTTGC+AGG | 0.443624 | 7_2:-74208822 | None:intergenic |
| TGTCTTATTATTATGCAAAT+GGG | 0.443765 | 7_2:+74207940 | Msa1075760:CDS |
| GTGATGCTTAATTTGGGTAA+AGG | 0.444787 | 7_2:-74206635 | None:intergenic |
| TTAGAGTTAAGTAATGTTGA+AGG | 0.445642 | 7_2:+74206913 | Msa1075760:CDS |
| ACCCTTATGCTAGAATTGTT+GGG | 0.448311 | 7_2:+74207451 | Msa1075760:CDS |
| TCATATTTGTGGTGATTAAG+TGG | 0.448650 | 7_2:-74206601 | None:intergenic |
| CATTATAACTTCTATCCCAT+TGG | 0.451931 | 7_2:-74207862 | None:intergenic |
| TTGCAGCACTTTAAAGATCT+GGG | 0.452076 | 7_2:+74207681 | Msa1075760:CDS |
| AAGGGTAAAACTACAGTCTC+TGG | 0.452351 | 7_2:-74208935 | None:intergenic |
| CTTTCCTCATTGGATGAGAT+GGG | 0.454518 | 7_2:+74208232 | Msa1075760:CDS |
| GATGGTCCGTAAAGGTTCAT+TGG | 0.454654 | 7_2:-74207783 | None:intergenic |
| AGTTGGAATTGTGGAGAAGA+AGG | 0.454925 | 7_2:+74208467 | Msa1075760:CDS |
| GATCCTTATGTCAATAAGTC+AGG | 0.455964 | 7_2:+74207321 | Msa1075760:CDS |
| ATACTTGTCTCGGCCTCCCT+TGG | 0.457692 | 7_2:+74208118 | Msa1075760:CDS |
| TAAAAGAAGAAAACATTGAA+TGG | 0.459645 | 7_2:+74208759 | Msa1075760:CDS |
| GCGGAGTTGAGTTGGAATTG+TGG | 0.462311 | 7_2:+74208458 | Msa1075760:CDS |
| GACACCGCACTTCCATTTCC+AGG | 0.464115 | 7_2:+74208992 | Msa1075760:CDS |
| TATTATGCAAATGGGATTGG+TGG | 0.471719 | 7_2:+74207948 | Msa1075760:CDS |
| ATGAACCTTTACGGACCATC+TGG | 0.472575 | 7_2:+74207786 | Msa1075760:CDS |
| GATTCATCAAGTTTGGATGA+TGG | 0.473089 | 7_2:+74206973 | Msa1075760:CDS |
| AGAACAGCAGTGTTATTAGT+AGG | 0.473533 | 7_2:-74208491 | None:intergenic |
| ATCGTTTCAGAGGAGCTAAC+CGG | 0.474960 | 7_2:+74207397 | Msa1075760:CDS |
| TTGGTTGTGATGCTTAATTT+GGG | 0.478811 | 7_2:-74206641 | None:intergenic |
| AACCTTGCAACAAGACTTTG+TGG | 0.478984 | 7_2:+74208320 | Msa1075760:CDS |
| GGCCTCTTCCGTCAGAATAC+AGG | 0.480417 | 7_2:-74208352 | None:intergenic |
| TCCCAACAATTCTAGCATAA+GGG | 0.485812 | 7_2:-74207452 | None:intergenic |
| CAAGTTTGGATGATGGAAAA+GGG | 0.487559 | 7_2:+74206980 | Msa1075760:CDS |
| GAGTGATATTCTTCAGAGTA+GGG | 0.489168 | 7_2:+74208730 | Msa1075760:CDS |
| ACCTAGAGGCGGAGTTGAGT+TGG | 0.491293 | 7_2:+74208450 | Msa1075760:CDS |
| TGTAATTAAAAGAGAATGAT+GGG | 0.491345 | 7_2:-74208373 | None:intergenic |
| AAATTAGAACCCATTTGAAA+AGG | 0.493217 | 7_2:+74207118 | Msa1075760:CDS |
| CAACAAGACTTTGTGGCAGT+GGG | 0.496808 | 7_2:+74208327 | Msa1075760:CDS |
| ATGTAATTAAAAGAGAATGA+TGG | 0.497186 | 7_2:-74208374 | None:intergenic |
| TCACCTGACTTATTGACATA+AGG | 0.498137 | 7_2:-74207324 | None:intergenic |
| TGGTGTGGCGAAGCCTGCTT+TGG | 0.501994 | 7_2:+74207287 | Msa1075760:CDS |
| GCAACAAGACTTTGTGGCAG+TGG | 0.502776 | 7_2:+74208326 | Msa1075760:CDS |
| TTCCAAAGCAGCCCAATTGA+AGG | 0.507142 | 7_2:-74208645 | None:intergenic |
| TAAAATCATTGCAGATTGCT+GGG | 0.509508 | 7_2:+74208178 | Msa1075760:CDS |
| CGACAAGGCTCCGCCAAGAT+GGG | 0.511811 | 7_2:+74208790 | Msa1075760:CDS |
| ATCACTCCGCCTCGTTCTCA+AGG | 0.512332 | 7_2:-74208714 | None:intergenic |
| CGAAATTGATCGACCCATCA+CGG | 0.515660 | 7_2:-74207203 | None:intergenic |
| AGACCCCGAAGAAAACCAAC+AGG | 0.515774 | 7_2:-74207153 | None:intergenic |
| TCGACAAGGCTCCGCCAAGA+TGG | 0.515948 | 7_2:+74208789 | Msa1075760:CDS |
| AGCACCAGTCTCAGCAGTAT+TGG | 0.516405 | 7_2:-74207898 | None:intergenic |
| CAGTCTTCAAAGTCATGGCC+AGG | 0.518871 | 7_2:-74208832 | None:intergenic |
| TTGTTCAGTCTTCAAAGTCA+TGG | 0.520709 | 7_2:-74208837 | None:intergenic |
| ATGTCTTCTGATTGTGTGAA+AGG | 0.522729 | 7_2:-74206781 | None:intergenic |
| ATGCTTCACATTTGTTGAGA+GGG | 0.524188 | 7_2:+74208084 | Msa1075760:CDS |
| GACAAACCTGATATTTGCTC+AGG | 0.525760 | 7_2:-74209046 | None:intergenic |
| ATTGGTTCAGCAAAGAACCT+TGG | 0.528899 | 7_2:+74207492 | Msa1075760:CDS |
| GAAATTGATCGACCCATCAC+GGG | 0.531430 | 7_2:-74207202 | None:intergenic |
| TGACACAAAACCCTTCAATT+GGG | 0.534596 | 7_2:+74208634 | Msa1075760:CDS |
| TTCATGGAGAATACTTGTCT+CGG | 0.535970 | 7_2:+74208108 | Msa1075760:CDS |
| TTCACCAATACTGCTGAGAC+TGG | 0.542007 | 7_2:+74207894 | Msa1075760:CDS |
| AATTGTTTGCCACGTCATCA+AGG | 0.543104 | 7_2:+74206722 | Msa1075760:CDS |
| ACACCGCACTTCCATTTCCA+GGG | 0.544654 | 7_2:+74208993 | Msa1075760:CDS |
| TCAAGATCAATCTCCAAAGC+AGG | 0.548156 | 7_2:-74207300 | None:intergenic |
| AAACCTGATATTTGCTCAGG+TGG | 0.553180 | 7_2:-74209043 | None:intergenic |
| AAAAGCAATTGCTTCAACCA+AGG | 0.554089 | 7_2:-74208135 | None:intergenic |
| TCCAAAGCAGCCCAATTGAA+GGG | 0.554348 | 7_2:-74208644 | None:intergenic |
| AATGCTTCACATTTGTTGAG+AGG | 0.557187 | 7_2:+74208083 | Msa1075760:CDS |
| TCCTAATGACATGGAACCAA+AGG | 0.557830 | 7_2:+74208202 | Msa1075760:CDS |
| GACATCCCTTCTGGAAGCAA+GGG | 0.561903 | 7_2:-74208953 | None:intergenic |
| GATGGATCTTCCCATCTTGG+CGG | 0.562093 | 7_2:-74208800 | None:intergenic |
| TGACATCCCTTCTGGAAGCA+AGG | 0.563448 | 7_2:-74208954 | None:intergenic |
| TTCAAGGCATGCTGAGAGTG+TGG | 0.565032 | 7_2:+74207233 | Msa1075760:CDS |
| TGCTTCCAGAAGGGATGTCA+TGG | 0.566633 | 7_2:+74208957 | Msa1075760:CDS |
| GGAGTGATATTCTTCAGAGT+AGG | 0.566708 | 7_2:+74208729 | Msa1075760:CDS |
| TGCCACAAAGTCTTGTTGCA+AGG | 0.567000 | 7_2:-74208322 | None:intergenic |
| TCATCACTCCAATCAAAAGC+AGG | 0.570076 | 7_2:-74207531 | None:intergenic |
| TTTAGGACAGAAATTGGTGA+AGG | 0.570677 | 7_2:+74206826 | Msa1075760:CDS |
| TATGATGATGATGAAGATAG+TGG | 0.573031 | 7_2:+74207267 | Msa1075760:CDS |
| AGGAATTTCTGTGTGCCTGT+TGG | 0.574094 | 7_2:+74207138 | Msa1075760:CDS |
| AAAGCAATTGCTTCAACCAA+GGG | 0.574715 | 7_2:-74208134 | None:intergenic |
| TCCAACTCAACTCCGCCTCT+AGG | 0.579625 | 7_2:-74208451 | None:intergenic |
| TGTAAACTCTATGAAAGAGA+TGG | 0.580203 | 7_2:+74207824 | Msa1075760:CDS |
| ACTCAGTTACCCAATGCCTA+AGG | 0.586240 | 7_2:-74208034 | None:intergenic |
| CGGAATAACAGTTATGCTGA+AGG | 0.586465 | 7_2:+74207417 | Msa1075760:CDS |
| ATCAGTGAGAATGAAAATGA+TGG | 0.590147 | 7_2:-74206577 | None:intergenic |
| AGCTATGGTTATCGTTTCAG+AGG | 0.590761 | 7_2:+74207387 | Msa1075760:CDS |
| TGCAGCACTTTAAAGATCTG+GGG | 0.592997 | 7_2:+74207682 | Msa1075760:CDS |
| GGGGTCTCCCGGATCCGTTG+GGG | 0.595764 | 7_2:+74207169 | Msa1075760:CDS |
| GACCTGTATTCTGACGGAAG+AGG | 0.597321 | 7_2:+74208350 | Msa1075760:CDS |
| GATCACCAGATGGTCCGTAA+AGG | 0.598852 | 7_2:-74207791 | None:intergenic |
| GTGAAAACTATGCATGCCAA+TGG | 0.600417 | 7_2:+74207846 | Msa1075760:CDS |
| GAAGAAAACATTGAATGGCG+AGG | 0.602645 | 7_2:+74208764 | Msa1075760:CDS |
| AGGTGGGACAAAATCACCCT+TGG | 0.605108 | 7_2:-74209026 | None:intergenic |
| AGTGATATTCTTCAGAGTAG+GGG | 0.612257 | 7_2:+74208731 | Msa1075760:CDS |
| TGAAAACTATGCATGCCAAT+GGG | 0.612639 | 7_2:+74207847 | Msa1075760:CDS |
| ATGGCCAGGAACTTGCAGGA+TGG | 0.616811 | 7_2:-74208818 | None:intergenic |
| CTTCAGCAGTGCTGACCTAG+AGG | 0.616908 | 7_2:+74208436 | Msa1075760:CDS |
| CAAACTTCCGCAACGATGTG+AGG | 0.617559 | 7_2:+74208267 | Msa1075760:CDS |
| GAGTGTGGTCACTCTTCTGG+TGG | 0.629374 | 7_2:+74208596 | Msa1075760:CDS |
| TTGAACATGGGAGACGAGTG+TGG | 0.632207 | 7_2:+74208581 | Msa1075760:CDS |
| AGTGGGGACCTGTATTCTGA+CGG | 0.637343 | 7_2:+74208344 | Msa1075760:CDS |
| TTGCTGGGATCCTAATGACA+TGG | 0.637899 | 7_2:+74208193 | Msa1075760:CDS |
| AACCTGATATTTGCTCAGGT+GGG | 0.639523 | 7_2:-74209042 | None:intergenic |
| GCAATTGCTTCAACCAAGGG+AGG | 0.641924 | 7_2:-74208131 | None:intergenic |
| TTTGGAAATGGAGAAACTAG+TGG | 0.642541 | 7_2:+74207566 | Msa1075760:CDS |
| GCAGCACTTTAAAGATCTGG+GGG | 0.651639 | 7_2:+74207683 | Msa1075760:CDS |
| GAAAGTTCCTCACATCGTTG+CGG | 0.652057 | 7_2:-74208274 | None:intergenic |
| CAGCAGTGCTGACCTAGAGG+CGG | 0.652213 | 7_2:+74208439 | Msa1075760:CDS |
| AAGTTGACTCGATTCATGCT+CGG | 0.655150 | 7_2:-74207616 | None:intergenic |
| GTAGATACAGGATCACCAGA+TGG | 0.668657 | 7_2:-74207801 | None:intergenic |
| TCAGCCCATCTCATCCAATG+AGG | 0.678611 | 7_2:-74208236 | None:intergenic |
| GATGTGAGGAACTTTCTAAG+AGG | 0.686976 | 7_2:+74208281 | Msa1075760:CDS |
| AAACCCTGGAAATGGAAGTG+CGG | 0.691244 | 7_2:-74208996 | None:intergenic |
| AACAAGACTTTGTGGCAGTG+GGG | 0.693052 | 7_2:+74208328 | Msa1075760:CDS |
| TATAGACAACCTTGATGACG+TGG | 0.694895 | 7_2:-74206731 | None:intergenic |
| TGATGATGAAGATAGTGGTG+TGG | 0.714024 | 7_2:+74207272 | Msa1075760:CDS |
| TGACTTCCTTGAGAACGAGG+CGG | 0.715518 | 7_2:+74208708 | Msa1075760:CDS |
| GAAGTGCGGTGTCAACTAAG+CGG | 0.722529 | 7_2:-74208982 | None:intergenic |
| TGAATGGCGAGGAATCGACA+AGG | 0.740784 | 7_2:+74208775 | Msa1075760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTTTTTGTTTATATTG+AGG | + | chr7_2:74206882-74206901 | Msa1075760:CDS | 15.0% |
| !!! | AAAATCAAATTTTGCATTAT+AGG | - | chr7_2:74208008-74208027 | None:intergenic | 15.0% |
| !!! | TATAATGCAAAATTTGATTT+TGG | + | chr7_2:74208007-74208026 | Msa1075760:CDS | 15.0% |
| !! | AACAAAAAAGACAAATACAA+AGG | - | chr7_2:74207081-74207100 | None:intergenic | 20.0% |
| !!! | TTGTCTTATTATTATGCAAA+TGG | + | chr7_2:74207939-74207958 | Msa1075760:CDS | 20.0% |
| !!! | TGTCTTATTATTATGCAAAT+GGG | + | chr7_2:74207940-74207959 | Msa1075760:CDS | 20.0% |
| !! | TGTAATTAAAAGAGAATGAT+GGG | - | chr7_2:74208376-74208395 | None:intergenic | 20.0% |
| !! | ATGTAATTAAAAGAGAATGA+TGG | - | chr7_2:74208377-74208396 | None:intergenic | 20.0% |
| !! | ATAAGATGAATAGGAAATTA+CGG | - | chr7_2:74208538-74208557 | None:intergenic | 20.0% |
| !! | TAAAAGAAGAAAACATTGAA+TGG | + | chr7_2:74208759-74208778 | Msa1075760:CDS | 20.0% |
| !! | AACATTTGGTTTCATATTTG+TGG | - | chr7_2:74206615-74206634 | None:intergenic | 25.0% |
| !!! | GCAAATTTTGACTATGAAAT+TGG | - | chr7_2:74206663-74206682 | None:intergenic | 25.0% |
| !!! | CATCATTGTCTTATTTGTTT+AGG | + | chr7_2:74206809-74206828 | Msa1075760:CDS | 25.0% |
| !! | TATTTGTTTAGGACAGAAAT+TGG | + | chr7_2:74206820-74206839 | Msa1075760:CDS | 25.0% |
| ! | TTAGAGTTAAGTAATGTTGA+AGG | + | chr7_2:74206913-74206932 | Msa1075760:CDS | 25.0% |
| ! | TAATGTTGAAGGTGAAAAAT+TGG | + | chr7_2:74206924-74206943 | Msa1075760:CDS | 25.0% |
| !!! | TGAAAAATTGGTTTTGTGTT+GGG | + | chr7_2:74206936-74206955 | Msa1075760:CDS | 25.0% |
| !!! | TCTTTTTTGTTGAGATTTTC+TGG | + | chr7_2:74207090-74207109 | Msa1075760:CDS | 25.0% |
| !!! | CTTTTTTGTTGAGATTTTCT+GGG | + | chr7_2:74207091-74207110 | Msa1075760:CDS | 25.0% |
| ! | AAATTAGAACCCATTTGAAA+AGG | + | chr7_2:74207118-74207137 | Msa1075760:CDS | 25.0% |
| !! | ACAGAAATTCCTTTTCAAAT+GGG | - | chr7_2:74207130-74207149 | None:intergenic | 25.0% |
| !! | AATTCTTTTCAGAATGGTAT+TGG | + | chr7_2:74207474-74207493 | Msa1075760:CDS | 25.0% |
| ! | TTTCACATTTGATGAGAAAA+AGG | + | chr7_2:74207731-74207750 | Msa1075760:CDS | 25.0% |
| ! | TTCACATTTGATGAGAAAAA+GGG | + | chr7_2:74207732-74207751 | Msa1075760:CDS | 25.0% |
| ! | TATTATTATGCAAATGGGAT+TGG | + | chr7_2:74207945-74207964 | Msa1075760:CDS | 25.0% |
| !!! | TTCTCTTTTAATTACATTGC+CGG | + | chr7_2:74208380-74208399 | Msa1075760:CDS | 25.0% |
| ! | ATGACACAAATAAGATGAAT+AGG | - | chr7_2:74208547-74208566 | None:intergenic | 25.0% |
| !! | TTCATCTTATTTGTGTCATT+AGG | + | chr7_2:74208548-74208567 | Msa1075760:CDS | 25.0% |
| ATCAGTGAGAATGAAAATGA+TGG | - | chr7_2:74206580-74206599 | None:intergenic | 30.0% | |
| TCATATTTGTGGTGATTAAG+TGG | - | chr7_2:74206604-74206623 | None:intergenic | 30.0% | |
| AATTTGGGTAAAGGAACATT+TGG | - | chr7_2:74206629-74206648 | None:intergenic | 30.0% | |
| TTGGTTGTGATGCTTAATTT+GGG | - | chr7_2:74206644-74206663 | None:intergenic | 30.0% | |
| ATTGGTTGTGATGCTTAATT+TGG | - | chr7_2:74206645-74206664 | None:intergenic | 30.0% | |
| GAAGTGTGATTATGAGAAAA+GGG | - | chr7_2:74206700-74206719 | None:intergenic | 30.0% | |
| TGAAGTGTGATTATGAGAAA+AGG | - | chr7_2:74206701-74206720 | None:intergenic | 30.0% | |
| !!! | GTGAAAAATTGGTTTTGTGT+TGG | + | chr7_2:74206935-74206954 | Msa1075760:CDS | 30.0% |
| !!! | GAAAAATTGGTTTTGTGTTG+GGG | + | chr7_2:74206937-74206956 | Msa1075760:CDS | 30.0% |
| ! | ACTTTTGTGGAAAATTCTGT+TGG | + | chr7_2:74207015-74207034 | Msa1075760:CDS | 30.0% |
| ! | CACAGAAATTCCTTTTCAAA+TGG | - | chr7_2:74207131-74207150 | None:intergenic | 30.0% |
| !!! | TCAATTTCGCTGTTTTTTCA+AGG | + | chr7_2:74207217-74207236 | Msa1075760:CDS | 30.0% |
| ! | TATGATGATGATGAAGATAG+TGG | + | chr7_2:74207267-74207286 | Msa1075760:CDS | 30.0% |
| TCAATAAGTCAGGTGATATT+TGG | + | chr7_2:74207331-74207350 | Msa1075760:CDS | 30.0% | |
| TGATGATTATCATCCGAATT+TGG | + | chr7_2:74207548-74207567 | Msa1075760:CDS | 30.0% | |
| TTATCATCCGAATTTGGAAA+TGG | + | chr7_2:74207554-74207573 | Msa1075760:CDS | 30.0% | |
| AGTTTCTCCATTTCCAAATT+CGG | - | chr7_2:74207564-74207583 | None:intergenic | 30.0% | |
| ! | AAATTTTCCAGCTAAATCAC+CGG | - | chr7_2:74207643-74207662 | None:intergenic | 30.0% |
| ! | GATTTAGCTGGAAAATTTTC+TGG | + | chr7_2:74207645-74207664 | Msa1075760:CDS | 30.0% |
| TTCTCATCAAATGTGAAAAC+TGG | - | chr7_2:74207729-74207748 | None:intergenic | 30.0% | |
| ATTGGAGAGAAAAAATGACA+AGG | - | chr7_2:74207768-74207787 | None:intergenic | 30.0% | |
| ATAGAGTTTACAGTAGATAC+AGG | - | chr7_2:74207816-74207835 | None:intergenic | 30.0% | |
| TGTAAACTCTATGAAAGAGA+TGG | + | chr7_2:74207824-74207843 | Msa1075760:CDS | 30.0% | |
| CATTATAACTTCTATCCCAT+TGG | - | chr7_2:74207865-74207884 | None:intergenic | 30.0% | |
| CAATGGGATAGAAGTTATAA+TGG | + | chr7_2:74207863-74207882 | Msa1075760:CDS | 30.0% | |
| !! | ATTTGATTTTGGATAGCCTT+AGG | + | chr7_2:74208018-74208037 | Msa1075760:CDS | 30.0% |
| !!! | ATTTTAGTTTTCCACAGTAC+CGG | - | chr7_2:74208164-74208183 | None:intergenic | 30.0% |
| TAAAATCATTGCAGATTGCT+GGG | + | chr7_2:74208178-74208197 | Msa1075760:CDS | 30.0% | |
| !! | TCTCTTTTAATTACATTGCC+GGG | + | chr7_2:74208381-74208400 | Msa1075760:CDS | 30.0% |
| TCTGCATCTTCTGATATATT+AGG | + | chr7_2:74208878-74208897 | Msa1075760:CDS | 30.0% | |
| ! | GTGATGCTTAATTTGGGTAA+AGG | - | chr7_2:74206638-74206657 | None:intergenic | 35.0% |
| ATGTCTTCTGATTGTGTGAA+AGG | - | chr7_2:74206784-74206803 | None:intergenic | 35.0% | |
| ! | TTTAGGACAGAAATTGGTGA+AGG | + | chr7_2:74206826-74206845 | Msa1075760:CDS | 35.0% |
| ! | AATTGGTGAAGGTTTGGTTA+AGG | + | chr7_2:74206837-74206856 | Msa1075760:CDS | 35.0% |
| ! | TTTTGTGTTGGGGTTTGTAT+AGG | + | chr7_2:74206947-74206966 | Msa1075760:CDS | 35.0% |
| TTTGTGTTGGGGTTTGTATA+GGG | + | chr7_2:74206948-74206967 | Msa1075760:CDS | 35.0% | |
| TAGGGATGATTCATCAAGTT+TGG | + | chr7_2:74206966-74206985 | Msa1075760:CDS | 35.0% | |
| GATTCATCAAGTTTGGATGA+TGG | + | chr7_2:74206973-74206992 | Msa1075760:CDS | 35.0% | |
| !! | TCAAGTTTGGATGATGGAAA+AGG | + | chr7_2:74206979-74206998 | Msa1075760:CDS | 35.0% |
| !! | CAAGTTTGGATGATGGAAAA+GGG | + | chr7_2:74206980-74206999 | Msa1075760:CDS | 35.0% |
| ! | GATGAATGTGAGTACTTTTG+TGG | + | chr7_2:74207002-74207021 | Msa1075760:CDS | 35.0% |
| ! | TTCTGTTGGAAAGTTTTCAG+TGG | + | chr7_2:74207029-74207048 | Msa1075760:CDS | 35.0% |
| ! | TGGAAAGTTTTCAGTGGAAT+TGG | + | chr7_2:74207035-74207054 | Msa1075760:CDS | 35.0% |
| ! | TTTGTTGAGATTTTCTGGGT+TGG | + | chr7_2:74207095-74207114 | Msa1075760:CDS | 35.0% |
| GATCCTTATGTCAATAAGTC+AGG | + | chr7_2:74207321-74207340 | Msa1075760:CDS | 35.0% | |
| TCACCTGACTTATTGACATA+AGG | - | chr7_2:74207327-74207346 | None:intergenic | 35.0% | |
| CTTCAGCATAACTGTTATTC+CGG | - | chr7_2:74207419-74207438 | None:intergenic | 35.0% | |
| !!! | TTATGCTGAAGGTGTTGTTT+TGG | + | chr7_2:74207428-74207447 | Msa1075760:CDS | 35.0% |
| ACCCTTATGCTAGAATTGTT+GGG | + | chr7_2:74207451-74207470 | Msa1075760:CDS | 35.0% | |
| TCCCAACAATTCTAGCATAA+GGG | - | chr7_2:74207455-74207474 | None:intergenic | 35.0% | |
| TTCCCAACAATTCTAGCATA+AGG | - | chr7_2:74207456-74207475 | None:intergenic | 35.0% | |
| ! | GTTGGGAATTCTTTTCAGAA+TGG | + | chr7_2:74207468-74207487 | Msa1075760:CDS | 35.0% |
| !! | GAACCTTGGATTTTTGAGAA+AGG | + | chr7_2:74207506-74207525 | Msa1075760:CDS | 35.0% |
| GTTCCTTTCTCAAAAATCCA+AGG | - | chr7_2:74207512-74207531 | None:intergenic | 35.0% | |
| TTTGGAAATGGAGAAACTAG+TGG | + | chr7_2:74207566-74207585 | Msa1075760:CDS | 35.0% | |
| !!! | AGCTGGAAAATTTTCTGGTT+TGG | + | chr7_2:74207650-74207669 | Msa1075760:CDS | 35.0% |
| ! | ATTGCAGCACTTTAAAGATC+TGG | + | chr7_2:74207680-74207699 | Msa1075760:CDS | 35.0% |
| ! | TTGCAGCACTTTAAAGATCT+GGG | + | chr7_2:74207681-74207700 | Msa1075760:CDS | 35.0% |
| TTCTCTCCAATGAACCTTTA+CGG | + | chr7_2:74207777-74207796 | Msa1075760:CDS | 35.0% | |
| TGAAAACTATGCATGCCAAT+GGG | + | chr7_2:74207847-74207866 | Msa1075760:CDS | 35.0% | |
| TATTATGCAAATGGGATTGG+TGG | + | chr7_2:74207948-74207967 | Msa1075760:CDS | 35.0% | |
| GTAACTGAGTTTCACATTGA+TGG | + | chr7_2:74208047-74208066 | Msa1075760:CDS | 35.0% | |
| ! | AATGCTTCACATTTGTTGAG+AGG | + | chr7_2:74208083-74208102 | Msa1075760:CDS | 35.0% |
| ! | ATGCTTCACATTTGTTGAGA+GGG | + | chr7_2:74208084-74208103 | Msa1075760:CDS | 35.0% |
| TTCATGGAGAATACTTGTCT+CGG | + | chr7_2:74208108-74208127 | Msa1075760:CDS | 35.0% | |
| AAAGCAATTGCTTCAACCAA+GGG | - | chr7_2:74208137-74208156 | None:intergenic | 35.0% | |
| AAAAGCAATTGCTTCAACCA+AGG | - | chr7_2:74208138-74208157 | None:intergenic | 35.0% | |
| !! | TGAAGCAATTGCTTTTGATC+CGG | + | chr7_2:74208142-74208161 | Msa1075760:CDS | 35.0% |
| CTAAAATCATTGCAGATTGC+TGG | + | chr7_2:74208177-74208196 | Msa1075760:CDS | 35.0% | |
| AATTACATTGCCGGGAATTT+CGG | + | chr7_2:74208389-74208408 | Msa1075760:CDS | 35.0% | |
| ! | AGAACAGCAGTGTTATTAGT+AGG | - | chr7_2:74208494-74208513 | None:intergenic | 35.0% |
| !!! | AGGAGTACCTATTTTGAACA+TGG | + | chr7_2:74208568-74208587 | Msa1075760:CDS | 35.0% |
| !! | GGAGTACCTATTTTGAACAT+GGG | + | chr7_2:74208569-74208588 | Msa1075760:CDS | 35.0% |
| TGACACAAAACCCTTCAATT+GGG | + | chr7_2:74208634-74208653 | Msa1075760:CDS | 35.0% | |
| GAGTGATATTCTTCAGAGTA+GGG | + | chr7_2:74208730-74208749 | Msa1075760:CDS | 35.0% | |
| AGTGATATTCTTCAGAGTAG+GGG | + | chr7_2:74208731-74208750 | Msa1075760:CDS | 35.0% | |
| TTGTTCAGTCTTCAAAGTCA+TGG | - | chr7_2:74208840-74208859 | None:intergenic | 35.0% | |
| GCTGTAAGACTTCATTTCAT+AGG | - | chr7_2:74209074-74209093 | None:intergenic | 35.0% | |
| AATTGTTTGCCACGTCATCA+AGG | + | chr7_2:74206722-74206741 | Msa1075760:CDS | 40.0% | |
| !! | TATAGACAACCTTGATGACG+TGG | - | chr7_2:74206734-74206753 | None:intergenic | 40.0% |
| GACAGAAATTGGTGAAGGTT+TGG | + | chr7_2:74206831-74206850 | Msa1075760:CDS | 40.0% | |
| ! | TGATGATGAAGATAGTGGTG+TGG | + | chr7_2:74207272-74207291 | Msa1075760:CDS | 40.0% |
| TCAAGATCAATCTCCAAAGC+AGG | - | chr7_2:74207303-74207322 | None:intergenic | 40.0% | |
| AGCTATGGTTATCGTTTCAG+AGG | + | chr7_2:74207387-74207406 | Msa1075760:CDS | 40.0% | |
| CGGAATAACAGTTATGCTGA+AGG | + | chr7_2:74207417-74207436 | Msa1075760:CDS | 40.0% | |
| GACCCTTATGCTAGAATTGT+TGG | + | chr7_2:74207450-74207469 | Msa1075760:CDS | 40.0% | |
| ! | ATTGGTTCAGCAAAGAACCT+TGG | + | chr7_2:74207492-74207511 | Msa1075760:CDS | 40.0% |
| !! | GAAAGGAACCTGCTTTTGAT+TGG | + | chr7_2:74207523-74207542 | Msa1075760:CDS | 40.0% |
| TCATCACTCCAATCAAAAGC+AGG | - | chr7_2:74207534-74207553 | None:intergenic | 40.0% | |
| TGGAGAAACTAGTGGTGTAT+AGG | + | chr7_2:74207574-74207593 | Msa1075760:CDS | 40.0% | |
| !! | AAGTTGACTCGATTCATGCT+CGG | - | chr7_2:74207619-74207638 | None:intergenic | 40.0% |
| CATGAATCGAGTCAACTTTC+CGG | + | chr7_2:74207621-74207640 | Msa1075760:CDS | 40.0% | |
| ! | TGCAGCACTTTAAAGATCTG+GGG | + | chr7_2:74207682-74207701 | Msa1075760:CDS | 40.0% |
| GTGAAAACTATGCATGCCAA+TGG | + | chr7_2:74207846-74207865 | Msa1075760:CDS | 40.0% | |
| !! | TTTTGGATAGCCTTAGGCAT+TGG | + | chr7_2:74208024-74208043 | Msa1075760:CDS | 40.0% |
| ! | TTTGGATAGCCTTAGGCATT+GGG | + | chr7_2:74208025-74208044 | Msa1075760:CDS | 40.0% |
| ! | CATTTGTTGAGAGGGTTTCA+TGG | + | chr7_2:74208092-74208111 | Msa1075760:CDS | 40.0% |
| TCCTAATGACATGGAACCAA+AGG | + | chr7_2:74208202-74208221 | Msa1075760:CDS | 40.0% | |
| ! | TCCTTTGGTTCCATGTCATT+AGG | - | chr7_2:74208206-74208225 | None:intergenic | 40.0% |
| CTTTCCTCATTGGATGAGAT+GGG | + | chr7_2:74208232-74208251 | Msa1075760:CDS | 40.0% | |
| GATGTGAGGAACTTTCTAAG+AGG | + | chr7_2:74208281-74208300 | Msa1075760:CDS | 40.0% | |
| AACCTTGCAACAAGACTTTG+TGG | + | chr7_2:74208320-74208339 | Msa1075760:CDS | 40.0% | |
| AAGAGAAAGTCCGAAATTCC+CGG | - | chr7_2:74208402-74208421 | None:intergenic | 40.0% | |
| AGTTGGAATTGTGGAGAAGA+AGG | + | chr7_2:74208467-74208486 | Msa1075760:CDS | 40.0% | |
| TCGTCTCCCATGTTCAAAAT+AGG | - | chr7_2:74208578-74208597 | None:intergenic | 40.0% | |
| GTGACACAAAACCCTTCAAT+TGG | + | chr7_2:74208633-74208652 | Msa1075760:CDS | 40.0% | |
| CGTTCTCAAGGAAGTCAAAA+AGG | - | chr7_2:74208705-74208724 | None:intergenic | 40.0% | |
| !!! | TTTTGACTTCCTTGAGAACG+AGG | + | chr7_2:74208705-74208724 | Msa1075760:CDS | 40.0% |
| GGAGTGATATTCTTCAGAGT+AGG | + | chr7_2:74208729-74208748 | Msa1075760:CDS | 40.0% | |
| GAAGAAAACATTGAATGGCG+AGG | + | chr7_2:74208764-74208783 | Msa1075760:CDS | 40.0% | |
| AAGGGTAAAACTACAGTCTC+TGG | - | chr7_2:74208938-74208957 | None:intergenic | 40.0% | |
| ! | TTTTACCCTTGCTTCCAGAA+GGG | + | chr7_2:74208948-74208967 | Msa1075760:CDS | 40.0% |
| GTCAAGAAAAACCCTGGAAA+TGG | - | chr7_2:74209007-74209026 | None:intergenic | 40.0% | |
| AACCTGATATTTGCTCAGGT+GGG | - | chr7_2:74209045-74209064 | None:intergenic | 40.0% | |
| AAACCTGATATTTGCTCAGG+TGG | - | chr7_2:74209046-74209065 | None:intergenic | 40.0% | |
| GACAAACCTGATATTTGCTC+AGG | - | chr7_2:74209049-74209068 | None:intergenic | 40.0% | |
| ! | TTACAGCTGCACTTTGTTTG+AGG | + | chr7_2:74209087-74209106 | Msa1075760:CDS | 40.0% |
| AGGAATTTCTGTGTGCCTGT+TGG | + | chr7_2:74207138-74207157 | Msa1075760:CDS | 45.0% | |
| !!! | GTGTGCCTGTTGGTTTTCTT+CGG | + | chr7_2:74207148-74207167 | Msa1075760:CDS | 45.0% |
| !!! | TGTGCCTGTTGGTTTTCTTC+GGG | + | chr7_2:74207149-74207168 | Msa1075760:CDS | 45.0% |
| GAAATTGATCGACCCATCAC+GGG | - | chr7_2:74207205-74207224 | None:intergenic | 45.0% | |
| CGAAATTGATCGACCCATCA+CGG | - | chr7_2:74207206-74207225 | None:intergenic | 45.0% | |
| !! | GCATATCGCTTTTGAGAGTG+CGG | + | chr7_2:74207353-74207372 | Msa1075760:CDS | 45.0% |
| !! | CATATCGCTTTTGAGAGTGC+GGG | + | chr7_2:74207354-74207373 | Msa1075760:CDS | 45.0% |
| !! | ATATCGCTTTTGAGAGTGCG+GGG | + | chr7_2:74207355-74207374 | Msa1075760:CDS | 45.0% |
| ATCGTTTCAGAGGAGCTAAC+CGG | + | chr7_2:74207397-74207416 | Msa1075760:CDS | 45.0% | |
| CAACTTTCCGGTGATTTAGC+TGG | + | chr7_2:74207633-74207652 | Msa1075760:CDS | 45.0% | |
| ! | GCAGCACTTTAAAGATCTGG+GGG | + | chr7_2:74207683-74207702 | Msa1075760:CDS | 45.0% |
| GATGGTCCGTAAAGGTTCAT+TGG | - | chr7_2:74207786-74207805 | None:intergenic | 45.0% | |
| ATGAACCTTTACGGACCATC+TGG | + | chr7_2:74207786-74207805 | Msa1075760:CDS | 45.0% | |
| GTAGATACAGGATCACCAGA+TGG | - | chr7_2:74207804-74207823 | None:intergenic | 45.0% | |
| TTCACCAATACTGCTGAGAC+TGG | + | chr7_2:74207894-74207913 | Msa1075760:CDS | 45.0% | |
| ACTCAGTTACCCAATGCCTA+AGG | - | chr7_2:74208037-74208056 | None:intergenic | 45.0% | |
| !! | TTGCTTTTGATCCGGTACTG+TGG | + | chr7_2:74208150-74208169 | Msa1075760:CDS | 45.0% |
| TTGCTGGGATCCTAATGACA+TGG | + | chr7_2:74208193-74208212 | Msa1075760:CDS | 45.0% | |
| GCTTTCCTCATTGGATGAGA+TGG | + | chr7_2:74208231-74208250 | Msa1075760:CDS | 45.0% | |
| GAAAGTTCCTCACATCGTTG+CGG | - | chr7_2:74208277-74208296 | None:intergenic | 45.0% | |
| !! | TGCCACAAAGTCTTGTTGCA+AGG | - | chr7_2:74208325-74208344 | None:intergenic | 45.0% |
| CAACAAGACTTTGTGGCAGT+GGG | + | chr7_2:74208327-74208346 | Msa1075760:CDS | 45.0% | |
| AACAAGACTTTGTGGCAGTG+GGG | + | chr7_2:74208328-74208347 | Msa1075760:CDS | 45.0% | |
| TCTGGTGGTTCTTCTGCATA+TGG | + | chr7_2:74208611-74208630 | Msa1075760:CDS | 45.0% | |
| TCCAAAGCAGCCCAATTGAA+GGG | - | chr7_2:74208647-74208666 | None:intergenic | 45.0% | |
| TTCCAAAGCAGCCCAATTGA+AGG | - | chr7_2:74208648-74208667 | None:intergenic | 45.0% | |
| !! | AATTGGGCTGCTTTGGAAAC+AGG | + | chr7_2:74208650-74208669 | Msa1075760:CDS | 45.0% |
| !!! | GCTGCTTTGGAAACAGGTTT+TGG | + | chr7_2:74208656-74208675 | Msa1075760:CDS | 45.0% |
| ! | GTTTTACCCTTGCTTCCAGA+AGG | + | chr7_2:74208947-74208966 | Msa1075760:CDS | 45.0% |
| AAACCCTGGAAATGGAAGTG+CGG | - | chr7_2:74208999-74209018 | None:intergenic | 45.0% | |
| ! | TCCAGGGTTTTTCTTGACCA+AGG | + | chr7_2:74209009-74209028 | Msa1075760:CDS | 45.0% |
| ! | CCAGGGTTTTTCTTGACCAA+GGG | + | chr7_2:74209010-74209029 | Msa1075760:CDS | 45.0% |
| !!! | GTGCCTGTTGGTTTTCTTCG+GGG | + | chr7_2:74207150-74207169 | Msa1075760:CDS | 50.0% |
| AGACCCCGAAGAAAACCAAC+AGG | - | chr7_2:74207156-74207175 | None:intergenic | 50.0% | |
| ! | GGGTCTCATTTTCCCGTGAT+GGG | + | chr7_2:74207190-74207209 | Msa1075760:CDS | 50.0% |
| TTCAAGGCATGCTGAGAGTG+TGG | + | chr7_2:74207233-74207252 | Msa1075760:CDS | 50.0% | |
| ! | GCGGGGAATTTTGTGAGCTA+TGG | + | chr7_2:74207372-74207391 | Msa1075760:CDS | 50.0% |
| !!! | GGGGGTCAATGCTGTTTTGT+TGG | + | chr7_2:74207701-74207720 | Msa1075760:CDS | 50.0% |
| GATCACCAGATGGTCCGTAA+AGG | - | chr7_2:74207794-74207813 | None:intergenic | 50.0% | |
| AGCACCAGTCTCAGCAGTAT+TGG | - | chr7_2:74207901-74207920 | None:intergenic | 50.0% | |
| GCAATTGCTTCAACCAAGGG+AGG | - | chr7_2:74208134-74208153 | None:intergenic | 50.0% | |
| TGAGGAAAGCGAGTCTCCTT+TGG | - | chr7_2:74208221-74208240 | None:intergenic | 50.0% | |
| AGGAGACTCGCTTTCCTCAT+TGG | + | chr7_2:74208222-74208241 | Msa1075760:CDS | 50.0% | |
| TCAGCCCATCTCATCCAATG+AGG | - | chr7_2:74208239-74208258 | None:intergenic | 50.0% | |
| CAAACTTCCGCAACGATGTG+AGG | + | chr7_2:74208267-74208286 | Msa1075760:CDS | 50.0% | |
| GCAACAAGACTTTGTGGCAG+TGG | + | chr7_2:74208326-74208345 | Msa1075760:CDS | 50.0% | |
| AGTGGGGACCTGTATTCTGA+CGG | + | chr7_2:74208344-74208363 | Msa1075760:CDS | 50.0% | |
| GACCTGTATTCTGACGGAAG+AGG | + | chr7_2:74208350-74208369 | Msa1075760:CDS | 50.0% | |
| !! | GCGGAGTTGAGTTGGAATTG+TGG | + | chr7_2:74208458-74208477 | Msa1075760:CDS | 50.0% |
| TTGAACATGGGAGACGAGTG+TGG | + | chr7_2:74208581-74208600 | Msa1075760:CDS | 50.0% | |
| ACCCTTCAATTGGGCTGCTT+TGG | + | chr7_2:74208643-74208662 | Msa1075760:CDS | 50.0% | |
| TGACTTCCTTGAGAACGAGG+CGG | + | chr7_2:74208708-74208727 | Msa1075760:CDS | 50.0% | |
| TGAATGGCGAGGAATCGACA+AGG | + | chr7_2:74208775-74208794 | Msa1075760:CDS | 50.0% | |
| GATGGATCTTCCCATCTTGG+CGG | - | chr7_2:74208803-74208822 | None:intergenic | 50.0% | |
| CAGGATGGATCTTCCCATCT+TGG | - | chr7_2:74208806-74208825 | None:intergenic | 50.0% | |
| AGATCCATCCTGCAAGTTCC+TGG | + | chr7_2:74208814-74208833 | Msa1075760:CDS | 50.0% | |
| CAGTCTTCAAAGTCATGGCC+AGG | - | chr7_2:74208835-74208854 | None:intergenic | 50.0% | |
| ! | GACATCCCTTCTGGAAGCAA+GGG | - | chr7_2:74208956-74208975 | None:intergenic | 50.0% |
| ! | TGACATCCCTTCTGGAAGCA+AGG | - | chr7_2:74208957-74208976 | None:intergenic | 50.0% |
| TGCTTCCAGAAGGGATGTCA+TGG | + | chr7_2:74208957-74208976 | Msa1075760:CDS | 50.0% | |
| ! | GAAGTGCGGTGTCAACTAAG+CGG | - | chr7_2:74208985-74209004 | None:intergenic | 50.0% |
| ACACCGCACTTCCATTTCCA+GGG | + | chr7_2:74208993-74209012 | Msa1075760:CDS | 50.0% | |
| CCCTTGGTCAAGAAAAACCC+TGG | - | chr7_2:74209013-74209032 | None:intergenic | 50.0% | |
| AGGTGGGACAAAATCACCCT+TGG | - | chr7_2:74209029-74209048 | None:intergenic | 50.0% | |
| GTCCCACCTGAGCAAATATC+AGG | + | chr7_2:74209040-74209059 | Msa1075760:CDS | 50.0% | |
| ! | TGGTTTTCTTCGGGGTCTCC+CGG | + | chr7_2:74207158-74207177 | Msa1075760:CDS | 55.0% |
| AATGAGACCCCCAACGGATC+CGG | - | chr7_2:74207180-74207199 | None:intergenic | 55.0% | |
| CGGGAAAATGAGACCCCCAA+CGG | - | chr7_2:74207186-74207205 | None:intergenic | 55.0% | |
| ! | GGGGTCTCATTTTCCCGTGA+TGG | + | chr7_2:74207189-74207208 | Msa1075760:CDS | 55.0% |
| GCTGAGACTGGTGCTCTTCA+AGG | + | chr7_2:74207906-74207925 | Msa1075760:CDS | 55.0% | |
| ATACTTGTCTCGGCCTCCCT+TGG | + | chr7_2:74208118-74208137 | Msa1075760:CDS | 55.0% | |
| GGCCTCTTCCGTCAGAATAC+AGG | - | chr7_2:74208355-74208374 | None:intergenic | 55.0% | |
| !! | CTTCAGCAGTGCTGACCTAG+AGG | + | chr7_2:74208436-74208455 | Msa1075760:CDS | 55.0% |
| ACCTAGAGGCGGAGTTGAGT+TGG | + | chr7_2:74208450-74208469 | Msa1075760:CDS | 55.0% | |
| TCCAACTCAACTCCGCCTCT+AGG | - | chr7_2:74208454-74208473 | None:intergenic | 55.0% | |
| GACGAGTGTGGTCACTCTTC+TGG | + | chr7_2:74208593-74208612 | Msa1075760:CDS | 55.0% | |
| GAGTGTGGTCACTCTTCTGG+TGG | + | chr7_2:74208596-74208615 | Msa1075760:CDS | 55.0% | |
| ATCACTCCGCCTCGTTCTCA+AGG | - | chr7_2:74208717-74208736 | None:intergenic | 55.0% | |
| ATGGCCAGGAACTTGCAGGA+TGG | - | chr7_2:74208821-74208840 | None:intergenic | 55.0% | |
| AGTCATGGCCAGGAACTTGC+AGG | - | chr7_2:74208825-74208844 | None:intergenic | 55.0% | |
| CGGTACCATGACATCCCTTC+TGG | - | chr7_2:74208965-74208984 | None:intergenic | 55.0% | |
| GACACCGCACTTCCATTTCC+AGG | + | chr7_2:74208992-74209011 | Msa1075760:CDS | 55.0% | |
| ATGAGACCCCCAACGGATCC+GGG | - | chr7_2:74207179-74207198 | None:intergenic | 60.0% | |
| TGGTGTGGCGAAGCCTGCTT+TGG | + | chr7_2:74207287-74207306 | Msa1075760:CDS | 60.0% | |
| !! | CAGCAGTGCTGACCTAGAGG+CGG | + | chr7_2:74208439-74208458 | Msa1075760:CDS | 60.0% |
| TCGACAAGGCTCCGCCAAGA+TGG | + | chr7_2:74208789-74208808 | Msa1075760:CDS | 60.0% | |
| CGACAAGGCTCCGCCAAGAT+GGG | + | chr7_2:74208790-74208809 | Msa1075760:CDS | 60.0% | |
| TCGGGGTCTCCCGGATCCGT+TGG | + | chr7_2:74207167-74207186 | Msa1075760:CDS | 70.0% | |
| CGGGGTCTCCCGGATCCGTT+GGG | + | chr7_2:74207168-74207187 | Msa1075760:CDS | 70.0% | |
| GGGGTCTCCCGGATCCGTTG+GGG | + | chr7_2:74207169-74207188 | Msa1075760:CDS | 70.0% | |
| GGGTCTCCCGGATCCGTTGG+GGG | + | chr7_2:74207170-74207189 | Msa1075760:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 74206562 | 74209129 | 74206562 | ID=Msa1075760;Name=Msa1075760 |
| chr7_2 | mRNA | 74206562 | 74209129 | 74206562 | ID=Msa1075760-mRNA-1;Parent=Msa1075760;Name=Msa1075760-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|-1|0|1|-1|1|1|0|855 |
| chr7_2 | exon | 74206562 | 74209129 | 74206562 | ID=Msa1075760-mRNA-1:exon:17384;Parent=Msa1075760-mRNA-1 |
| chr7_2 | CDS | 74206562 | 74209129 | 74206562 | ID=Msa1075760-mRNA-1:cds;Parent=Msa1075760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
