Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077110 | RHN48213.1 | 90.581 | 499 | 11 | 5 | 14 | 493 | 79 | 560 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077110 | sp|P02857|LEGA_PEA | 70.623 | 514 | 102 | 7 | 9 | 493 | 24 | 517 | 0.0 | 694 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077110 | A0A396H636 | 90.581 | 499 | 11 | 5 | 14 | 493 | 79 | 560 | 0.0 | 820 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1036780 | Msa1077110 | 0.823027 | 1.727448e-53 | -8.615850e-47 |
| Msa1077110 | Msa1077120 | 0.958339 | 3.008813e-116 | -8.615850e-47 |
| Msa1077110 | Msa1077210 | 0.878168 | 3.494123e-69 | -8.615850e-47 |
| Msa1077110 | Msa1149390 | 0.807634 | 4.592795e-50 | -8.615850e-47 |
| Msa0967280 | Msa1077110 | 0.805087 | 1.581008e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077110 | MtrunA17_Chr7g0261351 | 90.581 | 499 | 11 | 5 | 14 | 493 | 79 | 560 | 0.0 | 820 |
| Msa1077110 | MtrunA17_Chr1g0185841 | 41.651 | 545 | 233 | 13 | 14 | 484 | 29 | 562 | 7.77e-127 | 380 |
| Msa1077110 | MtrunA17_Chr1g0185811 | 40.000 | 560 | 237 | 12 | 14 | 484 | 29 | 578 | 1.52e-119 | 362 |
| Msa1077110 | MtrunA17_Chr7g0261321 | 38.050 | 523 | 247 | 9 | 12 | 484 | 28 | 523 | 4.48e-114 | 347 |
| Msa1077110 | MtrunA17_Chr1g0185821 | 40.347 | 518 | 241 | 9 | 14 | 473 | 29 | 536 | 5.15e-114 | 347 |
| Msa1077110 | MtrunA17_Chr1g0183891 | 41.848 | 184 | 100 | 3 | 262 | 440 | 41 | 222 | 2.70e-38 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1077110 | AT5G44120.3 | 39.030 | 474 | 223 | 8 | 14 | 477 | 34 | 451 | 1.76e-103 | 318 |
| Msa1077110 | AT1G03880.1 | 37.917 | 480 | 221 | 10 | 5 | 473 | 21 | 434 | 1.14e-90 | 284 |
| Msa1077110 | AT5G44120.2 | 38.213 | 403 | 183 | 8 | 85 | 477 | 1 | 347 | 6.16e-81 | 256 |
| Msa1077110 | AT1G03890.1 | 32.211 | 475 | 248 | 7 | 7 | 473 | 27 | 435 | 2.63e-80 | 257 |
| Msa1077110 | AT4G28520.1 | 34.795 | 365 | 179 | 6 | 121 | 477 | 189 | 502 | 5.97e-62 | 211 |
| Msa1077110 | AT4G28520.1 | 40.698 | 86 | 51 | 0 | 13 | 98 | 34 | 119 | 3.77e-16 | 81.6 |
| Msa1077110 | AT5G44120.1 | 37.299 | 311 | 143 | 6 | 169 | 477 | 4 | 264 | 1.15e-58 | 196 |
| Msa1077110 | AT4G28520.5 | 30.334 | 389 | 181 | 7 | 13 | 362 | 34 | 371 | 8.47e-46 | 164 |
| Msa1077110 | AT4G28520.3 | 40.127 | 157 | 94 | 0 | 321 | 477 | 275 | 431 | 7.46e-37 | 141 |
| Msa1077110 | AT4G28520.3 | 41.573 | 89 | 51 | 1 | 11 | 98 | 31 | 119 | 2.52e-16 | 81.6 |
| Msa1077110 | AT4G28520.2 | 32.400 | 250 | 110 | 6 | 121 | 362 | 189 | 387 | 2.57e-26 | 110 |
| Msa1077110 | AT4G28520.2 | 40.698 | 86 | 51 | 0 | 13 | 98 | 34 | 119 | 2.58e-16 | 81.3 |
| Msa1077110 | AT4G28520.4 | 32.400 | 250 | 110 | 6 | 121 | 362 | 189 | 387 | 3.17e-26 | 110 |
| Msa1077110 | AT4G28520.4 | 40.698 | 86 | 51 | 0 | 13 | 98 | 34 | 119 | 2.74e-16 | 81.3 |
Find 123 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAGGTAGTGGATATTT+TGG | 0.189498 | 7_2:-75661149 | Msa1077110:intron |
| GCATCTCATCAAGTTGATTT+TGG | 0.194708 | 7_2:+75660886 | None:intergenic |
| CTCTGAAGCGGTTAACCTTT+TGG | 0.227280 | 7_2:+75661009 | None:intergenic |
| ATCTTCTTCATCTTGTCTGC+TGG | 0.238556 | 7_2:+75660449 | None:intergenic |
| CATCTGAATTGTCTGTTGTT+TGG | 0.280692 | 7_2:+75661367 | None:intergenic |
| TGGCTTCAAGAGGGATTTCT+TGG | 0.297875 | 7_2:-75660607 | Msa1077110:CDS |
| GCTGCCATTGCTAGGCTTGC+AGG | 0.308997 | 7_2:-75659816 | Msa1077110:CDS |
| TCTGACTCTATACGGTTATC+AGG | 0.356503 | 7_2:+75661415 | None:intergenic |
| TCTTCTTCATCTTGTCTGCT+GGG | 0.361536 | 7_2:+75660450 | None:intergenic |
| TGACAGAGATTCTATCTTGC+TGG | 0.375161 | 7_2:-75660738 | Msa1077110:intron |
| AAAGAGAGAGTCGAAGGTTC+AGG | 0.378592 | 7_2:-75661073 | Msa1077110:CDS |
| AAGATGCATTGAACGTGAAC+AGG | 0.383240 | 7_2:-75660584 | Msa1077110:CDS |
| GGGGAGAACAAAGGAGGGGA+AGG | 0.397961 | 7_2:-75660665 | Msa1077110:CDS |
| GAAAATTTCTTGAGGAGCAT+TGG | 0.398726 | 7_2:+75661282 | None:intergenic |
| GGGTGGCGTTGTTGTCTCTC+TGG | 0.402254 | 7_2:+75660471 | None:intergenic |
| AGCTCTGCGTTCGGACTCAC+GGG | 0.403610 | 7_2:+75659677 | None:intergenic |
| TGCCACCTTCTGACTCTATA+CGG | 0.408552 | 7_2:+75661407 | None:intergenic |
| CAGAAACAATTTGCACTGCC+AGG | 0.417327 | 7_2:-75660302 | Msa1077110:CDS |
| CAGCTCTGCGTTCGGACTCA+CGG | 0.417569 | 7_2:+75659676 | None:intergenic |
| CTAAGCTGCAGCTCTGCGTT+CGG | 0.424452 | 7_2:+75659668 | None:intergenic |
| CAGGAACGAAGACGAGGAGA+AGG | 0.436632 | 7_2:-75660538 | Msa1077110:CDS |
| GCTTTGACCTCCCAGCTCTC+AGG | 0.439759 | 7_2:-75660203 | Msa1077110:CDS |
| ATCAAAGTAACTGACCTTGT+TGG | 0.444009 | 7_2:+75661257 | None:intergenic |
| TCCTCCTTCCACTTTGACAA+TGG | 0.447325 | 7_2:+75660512 | None:intergenic |
| AGTCTTAGCCACCTGAGAGC+TGG | 0.450799 | 7_2:+75660192 | None:intergenic |
| AGGAAGGGGAGAACAAAGGA+GGG | 0.455618 | 7_2:-75660670 | Msa1077110:CDS |
| GTCTTAGCCACCTGAGAGCT+GGG | 0.457608 | 7_2:+75660193 | None:intergenic |
| GAAAAGCAGAAGAGGGGAAG+AGG | 0.459048 | 7_2:-75660382 | Msa1077110:CDS |
| GAGGAAGGGGAGAACAAAGG+AGG | 0.459196 | 7_2:-75660671 | Msa1077110:CDS |
| ATGAAGATGAGGCCATGTTC+TGG | 0.465847 | 7_2:+75660274 | None:intergenic |
| ATAAGAGAAACGGCAATGAC+TGG | 0.466785 | 7_2:+75660924 | None:intergenic |
| AGCGTAATATTAGCATTGAA+TGG | 0.476842 | 7_2:-75659996 | Msa1077110:CDS |
| TGTGGCTCCTCAAAGGTCTC+AGG | 0.481154 | 7_2:+75661107 | None:intergenic |
| CTTCATCTTGTCTGCTGGGG+TGG | 0.487224 | 7_2:+75660454 | None:intergenic |
| CAACAACAAGTGAGAGGAAG+GGG | 0.490614 | 7_2:-75660684 | Msa1077110:CDS |
| ATGATAATGCTGCCATTGCT+AGG | 0.494110 | 7_2:-75659824 | Msa1077110:CDS |
| CTATACGGTTATCAGGTTCA+AGG | 0.495690 | 7_2:+75661422 | None:intergenic |
| GGGTTGTCCTGAGACCTTTG+AGG | 0.496834 | 7_2:-75661114 | Msa1077110:CDS |
| TTCGATGAGGAGCTAGAAGC+TGG | 0.507000 | 7_2:-75659930 | Msa1077110:CDS |
| GCCAGTGTCAATAAGAGAAA+CGG | 0.507229 | 7_2:+75660914 | None:intergenic |
| GAAGAGCGCCCCTGCCGCCG+AGG | 0.510029 | 7_2:-75660360 | Msa1077110:CDS |
| AGATGAAGATGAAGATGAAG+AGG | 0.510375 | 7_2:-75660430 | Msa1077110:CDS |
| GAGAGCTGGGAGGTCAAAGC+TGG | 0.514503 | 7_2:+75660206 | None:intergenic |
| CAGCAAAATCAGTGAGCGAC+AGG | 0.515977 | 7_2:-75659872 | Msa1077110:CDS |
| AGATTCCTGTGGCTCCTCAA+AGG | 0.516882 | 7_2:+75661100 | None:intergenic |
| TGAGGAGCATTGGAGTAGAA+TGG | 0.517059 | 7_2:+75661292 | None:intergenic |
| AGCAATGGCAGCATTATCAT+TGG | 0.517614 | 7_2:+75659827 | None:intergenic |
| GACAGAGATTCTATCTTGCT+GGG | 0.518681 | 7_2:-75660737 | Msa1077110:intron |
| ATGAAGATGAAGAGGACGAG+TGG | 0.519387 | 7_2:-75660422 | Msa1077110:CDS |
| CTGCCATTGCTAGGCTTGCA+GGG | 0.521189 | 7_2:-75659815 | Msa1077110:CDS |
| AACAGACAATTCAGATGTGC+AGG | 0.521313 | 7_2:-75661361 | Msa1077110:CDS |
| TCAAAGGTCTCAGGACAACC+CGG | 0.526522 | 7_2:+75661116 | None:intergenic |
| GGCGTTGTTGTCTCTCTGGA+GGG | 0.532511 | 7_2:+75660475 | None:intergenic |
| CAGCTACATTCAACATGGAC+AGG | 0.533471 | 7_2:-75659752 | Msa1077110:CDS |
| ATGAAGAGGACGAGTGGAGG+CGG | 0.533847 | 7_2:-75660416 | Msa1077110:CDS |
| ATCAACTTGATGAGATGCCT+AGG | 0.535577 | 7_2:-75660881 | Msa1077110:CDS |
| AGCAACAACAAGTGAGAGGA+AGG | 0.535707 | 7_2:-75660686 | Msa1077110:CDS |
| GCTTGTGGGTTGTAGATGTC+AGG | 0.536179 | 7_2:+75660249 | None:intergenic |
| GGCCATGTTCTGGTGAAGCC+TGG | 0.537348 | 7_2:+75660284 | None:intergenic |
| GACATCTACAACCCACAAGC+TGG | 0.543748 | 7_2:-75660246 | Msa1077110:CDS |
| AAGAGAGAGTCGAAGGTTCA+GGG | 0.545546 | 7_2:-75661072 | Msa1077110:CDS |
| CACTGGCATCCCACTTAGAG+TGG | 0.546537 | 7_2:+75659785 | None:intergenic |
| GTTCAGAGACAGTCACCAAA+AGG | 0.548058 | 7_2:-75661024 | Msa1077110:CDS |
| GAGCGACAGGTTCACTTATG+TGG | 0.548616 | 7_2:-75659859 | Msa1077110:CDS |
| GGGAGAACAAAGGAGGGGAA+GGG | 0.548965 | 7_2:-75660664 | Msa1077110:CDS |
| TGCCAGGCTTCACCAGAACA+TGG | 0.550979 | 7_2:-75660286 | Msa1077110:CDS |
| TGGCGTTGTTGTCTCTCTGG+AGG | 0.551371 | 7_2:+75660474 | None:intergenic |
| GATCTCATTGCAGTTCCTAC+CGG | 0.553691 | 7_2:-75660981 | Msa1077110:CDS |
| TGAGACCTTTGAGGAGCCAC+AGG | 0.553953 | 7_2:-75661105 | Msa1077110:CDS |
| CTTCTTCATCTTGTCTGCTG+GGG | 0.554236 | 7_2:+75660451 | None:intergenic |
| GGGACACAATCCACTCTAAG+TGG | 0.554986 | 7_2:-75659795 | Msa1077110:CDS |
| ATCATCAGAAAAGCAGAAGA+GGG | 0.559051 | 7_2:-75660389 | Msa1077110:CDS |
| GGAAGGGGAGAACAAAGGAG+GGG | 0.559372 | 7_2:-75660669 | Msa1077110:CDS |
| AAGGTGGCATTATTGAGACT+TGG | 0.560213 | 7_2:-75661393 | Msa1077110:CDS |
| GCCGTTTCTCTTATTGACAC+TGG | 0.561712 | 7_2:-75660915 | Msa1077110:CDS |
| GAAGGGAGCCATTGTCAAAG+TGG | 0.561778 | 7_2:-75660520 | Msa1077110:CDS |
| CATCATCAGAAAAGCAGAAG+AGG | 0.567506 | 7_2:-75660390 | Msa1077110:CDS |
| TCTCTTTGTTCAGATTCCTG+TGG | 0.573636 | 7_2:+75661089 | None:intergenic |
| CTGAACAAAGAGAGAGTCGA+AGG | 0.578834 | 7_2:-75661079 | Msa1077110:CDS |
| AGGAACGAAGACGAGGAGAA+GGG | 0.580851 | 7_2:-75660537 | Msa1077110:CDS |
| ATTCAACATGGACAGGAATG+AGG | 0.590592 | 7_2:-75659745 | Msa1077110:CDS |
| CTAAGACTCAGTGCTGAGCA+TGG | 0.593269 | 7_2:-75660177 | Msa1077110:CDS |
| AAGGTTAACCGCTTCAGAGA+GGG | 0.593895 | 7_2:-75661005 | Msa1077110:CDS |
| GGAGCCATTGTCAAAGTGGA+AGG | 0.595071 | 7_2:-75660516 | Msa1077110:CDS |
| AGGGAACAACAAGAAAATGA+AGG | 0.596210 | 7_2:-75660645 | Msa1077110:CDS |
| TGAGATCACCCTCTCTGAAG+CGG | 0.596806 | 7_2:+75660997 | None:intergenic |
| TATACGGTTATCAGGTTCAA+GGG | 0.597531 | 7_2:+75661423 | None:intergenic |
| GTAGCTGCAAGCACATCCAC+TGG | 0.599451 | 7_2:+75659768 | None:intergenic |
| TGTTGGATGAAAATTTCTTG+AGG | 0.600246 | 7_2:+75661274 | None:intergenic |
| TGAGAGGAAGGGGAGAACAA+AGG | 0.604422 | 7_2:-75660674 | Msa1077110:CDS |
| TTGACCTCCCAGCTCTCAGG+TGG | 0.604883 | 7_2:-75660200 | Msa1077110:CDS |
| TTGAAGAGTACAACGAGAGA+GGG | 0.608324 | 7_2:+75661333 | None:intergenic |
| AAGATGAAGAGGACGAGTGG+AGG | 0.609586 | 7_2:-75660419 | Msa1077110:CDS |
| GCAACAACAAGTGAGAGGAA+GGG | 0.610187 | 7_2:-75660685 | Msa1077110:CDS |
| AGGGAATCTGAACAAGGAGA+AGG | 0.623842 | 7_2:-75661053 | Msa1077110:CDS |
| GTACATCCAAAATACAGTAC+CGG | 0.624828 | 7_2:+75660962 | None:intergenic |
| TAGCATTGAATGGACGTGCA+AGG | 0.625592 | 7_2:-75659986 | Msa1077110:CDS |
| AGATGCATTGAACGTGAACA+GGG | 0.625997 | 7_2:-75660583 | Msa1077110:CDS |
| TCAACTTGATGAGATGCCTA+GGG | 0.627421 | 7_2:-75660880 | Msa1077110:intron |
| GCCATTGTCAAAGTGGAAGG+AGG | 0.628414 | 7_2:-75660513 | Msa1077110:CDS |
| GAACAACAAGAAAATGAAGG+AGG | 0.629084 | 7_2:-75660642 | Msa1077110:CDS |
| CAAAGGTCTCAGGACAACCC+GGG | 0.629938 | 7_2:+75661117 | None:intergenic |
| TGTCCCTGCAAGCCTAGCAA+TGG | 0.632591 | 7_2:+75659812 | None:intergenic |
| CTACAAGTAGTGAACTGCAA+TGG | 0.634940 | 7_2:-75659963 | Msa1077110:CDS |
| GTTGAAGAGTACAACGAGAG+AGG | 0.643187 | 7_2:+75661332 | None:intergenic |
| ACATGGACAGGAATGAGGCA+AGG | 0.649331 | 7_2:-75659740 | Msa1077110:CDS |
| GGACACAATCCACTCTAAGT+GGG | 0.651552 | 7_2:-75659794 | Msa1077110:CDS |
| TATCAGCAACAACAAGTGAG+AGG | 0.656929 | 7_2:-75660690 | Msa1077110:CDS |
| AGGTTCAGGGAATCTGAACA+AGG | 0.656969 | 7_2:-75661059 | Msa1077110:CDS |
| TCAAGGCAGGAACGAAGACG+AGG | 0.664269 | 7_2:-75660544 | Msa1077110:CDS |
| GCTTGCAGCTACATTCAACA+TGG | 0.668251 | 7_2:-75659757 | Msa1077110:CDS |
| TGGCAACACTGTGTTCGATG+AGG | 0.669328 | 7_2:-75659943 | Msa1077110:CDS |
| TGTGAAAGAGAAAGACGCAA+CGG | 0.673639 | 7_2:-75660330 | Msa1077110:CDS |
| TCATCAGAAAAGCAGAAGAG+GGG | 0.679443 | 7_2:-75660388 | Msa1077110:CDS |
| AACCGTATAGAGTCAGAAGG+TGG | 0.682330 | 7_2:-75661409 | Msa1077110:CDS |
| GATGTCAGGTGATGAAGATG+AGG | 0.682478 | 7_2:+75660263 | None:intergenic |
| CTGAACAAGGAGAAGGACGT+AGG | 0.683262 | 7_2:-75661046 | Msa1077110:CDS |
| GATAACCGTATAGAGTCAGA+AGG | 0.693081 | 7_2:-75661412 | Msa1077110:CDS |
| AAAGGTTAACCGCTTCAGAG+AGG | 0.693271 | 7_2:-75661006 | Msa1077110:CDS |
| ATCCAAAATACAGTACCGGT+AGG | 0.700412 | 7_2:+75660966 | None:intergenic |
| TTTGCATTGAGATTGTAGTG+AGG | 0.715037 | 7_2:+75660020 | None:intergenic |
| CATTGGAGTAGAATGGTCTG+CGG | 0.722604 | 7_2:+75661299 | None:intergenic |
| TTAGCCACCTGAGAGCTGGG+AGG | 0.734436 | 7_2:+75660196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTAACACTAATAGAAAT+TGG | - | chr7_2:75660372-75660391 | Msa1077110:CDS | 20.0% |
| !! | AATAGAAATTGGTATTTGTT+TGG | - | chr7_2:75660383-75660402 | Msa1077110:CDS | 20.0% |
| !! | AAAAGAAAAAACATACTCTA+TGG | + | chr7_2:75661016-75661035 | None:intergenic | 20.0% |
| !! | TTCTGTTTCATATAAAAAGT+TGG | + | chr7_2:75661108-75661127 | None:intergenic | 20.0% |
| !!! | GTTTTAACACTAATAGAAAT+TGG | - | chr7_2:75660372-75660391 | Msa1077110:CDS | 20.0% |
| !! | AATAGAAATTGGTATTTGTT+TGG | - | chr7_2:75660383-75660402 | Msa1077110:CDS | 20.0% |
| !! | AAAAGAAAAAACATACTCTA+TGG | + | chr7_2:75661016-75661035 | None:intergenic | 20.0% |
| !! | TTCTGTTTCATATAAAAAGT+TGG | + | chr7_2:75661108-75661127 | None:intergenic | 20.0% |
| ! | TGTAATGTAGGTAAAGATAT+TGG | + | chr7_2:75659936-75659955 | None:intergenic | 25.0% |
| ! | CTAATATATGCATGTAATGT+AGG | + | chr7_2:75659948-75659967 | None:intergenic | 25.0% |
| !!! | TTTTTTACTATACCCATTAC+AGG | - | chr7_2:75659997-75660016 | Msa1077110:CDS | 25.0% |
| ! | GATATAGTTGAAAAACTTCA+AGG | - | chr7_2:75660600-75660619 | Msa1077110:CDS | 25.0% |
| !! | TCTTTTAGCATCAACATTAT+AGG | - | chr7_2:75661066-75661085 | Msa1077110:CDS | 25.0% |
| ! | TGTAATGTAGGTAAAGATAT+TGG | + | chr7_2:75659936-75659955 | None:intergenic | 25.0% |
| ! | CTAATATATGCATGTAATGT+AGG | + | chr7_2:75659948-75659967 | None:intergenic | 25.0% |
| !!! | TTTTTTACTATACCCATTAC+AGG | - | chr7_2:75659997-75660016 | Msa1077110:CDS | 25.0% |
| ! | GATATAGTTGAAAAACTTCA+AGG | - | chr7_2:75660600-75660619 | Msa1077110:CDS | 25.0% |
| !! | TCTTTTAGCATCAACATTAT+AGG | - | chr7_2:75661066-75661085 | Msa1077110:CDS | 25.0% |
| TGTTGGATGAAAATTTCTTG+AGG | + | chr7_2:75659890-75659909 | None:intergenic | 30.0% | |
| ! | CAAGAAATTTTCATCCAACA+AGG | - | chr7_2:75659890-75659909 | Msa1077110:CDS | 30.0% |
| AAATATCCACTACCTGTAAT+GGG | + | chr7_2:75660012-75660031 | None:intergenic | 30.0% | |
| AAAATATCCACTACCTGTAA+TGG | + | chr7_2:75660013-75660032 | None:intergenic | 30.0% | |
| !!! | ATTACAGGTAGTGGATATTT+TGG | - | chr7_2:75660012-75660031 | Msa1077110:CDS | 30.0% |
| ATTGTAAAAACTCTTGCTCT+TGG | + | chr7_2:75660452-75660471 | None:intergenic | 30.0% | |
| ! | GTCTTTCTCTTTCACATTTT+TGG | + | chr7_2:75660827-75660846 | None:intergenic | 30.0% |
| AGATTGACATAAAACGAATC+TGG | + | chr7_2:75661049-75661068 | None:intergenic | 30.0% | |
| ! | AGCGTAATATTAGCATTGAA+TGG | - | chr7_2:75661165-75661184 | Msa1077110:intron | 30.0% |
| TGTTGGATGAAAATTTCTTG+AGG | + | chr7_2:75659890-75659909 | None:intergenic | 30.0% | |
| ! | CAAGAAATTTTCATCCAACA+AGG | - | chr7_2:75659890-75659909 | Msa1077110:CDS | 30.0% |
| AAATATCCACTACCTGTAAT+GGG | + | chr7_2:75660012-75660031 | None:intergenic | 30.0% | |
| AAAATATCCACTACCTGTAA+TGG | + | chr7_2:75660013-75660032 | None:intergenic | 30.0% | |
| !!! | ATTACAGGTAGTGGATATTT+TGG | - | chr7_2:75660012-75660031 | Msa1077110:CDS | 30.0% |
| ATTGTAAAAACTCTTGCTCT+TGG | + | chr7_2:75660452-75660471 | None:intergenic | 30.0% | |
| ! | GTCTTTCTCTTTCACATTTT+TGG | + | chr7_2:75660827-75660846 | None:intergenic | 30.0% |
| AGATTGACATAAAACGAATC+TGG | + | chr7_2:75661049-75661068 | None:intergenic | 30.0% | |
| ! | AGCGTAATATTAGCATTGAA+TGG | - | chr7_2:75661165-75661184 | Msa1077110:intron | 30.0% |
| TATACGGTTATCAGGTTCAA+GGG | + | chr7_2:75659741-75659760 | None:intergenic | 35.0% | |
| CATCTGAATTGTCTGTTGTT+TGG | + | chr7_2:75659797-75659816 | None:intergenic | 35.0% | |
| ! | GAAAATTTCTTGAGGAGCAT+TGG | + | chr7_2:75659882-75659901 | None:intergenic | 35.0% |
| ATCAAAGTAACTGACCTTGT+TGG | + | chr7_2:75659907-75659926 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGCATGGTATTCC+CGG | - | chr7_2:75660026-75660045 | Msa1077110:CDS | 35.0% |
| GTACATCCAAAATACAGTAC+CGG | + | chr7_2:75660202-75660221 | None:intergenic | 35.0% | |
| ! | ATTTTGGATGTACAATGACC+AGG | - | chr7_2:75660209-75660228 | Msa1077110:CDS | 35.0% |
| !!! | GCATCTCATCAAGTTGATTT+TGG | + | chr7_2:75660278-75660297 | None:intergenic | 35.0% |
| AGGGAACAACAAGAAAATGA+AGG | - | chr7_2:75660516-75660535 | Msa1077110:CDS | 35.0% | |
| GAACAACAAGAAAATGAAGG+AGG | - | chr7_2:75660519-75660538 | Msa1077110:CDS | 35.0% | |
| TAGTTGAAAAACTTCAAGGC+AGG | - | chr7_2:75660604-75660623 | Msa1077110:CDS | 35.0% | |
| AGATGAAGATGAAGATGAAG+AGG | - | chr7_2:75660731-75660750 | Msa1077110:CDS | 35.0% | |
| ATCATCAGAAAAGCAGAAGA+GGG | - | chr7_2:75660772-75660791 | Msa1077110:intron | 35.0% | |
| !! | TTTTGATTCTACCAGCTTGT+GGG | + | chr7_2:75660929-75660948 | None:intergenic | 35.0% |
| TTTGCATTGAGATTGTAGTG+AGG | + | chr7_2:75661144-75661163 | None:intergenic | 35.0% | |
| TATACGGTTATCAGGTTCAA+GGG | + | chr7_2:75659741-75659760 | None:intergenic | 35.0% | |
| CATCTGAATTGTCTGTTGTT+TGG | + | chr7_2:75659797-75659816 | None:intergenic | 35.0% | |
| ! | GAAAATTTCTTGAGGAGCAT+TGG | + | chr7_2:75659882-75659901 | None:intergenic | 35.0% |
| ATCAAAGTAACTGACCTTGT+TGG | + | chr7_2:75659907-75659926 | None:intergenic | 35.0% | |
| !!! | ATATTTTGGCATGGTATTCC+CGG | - | chr7_2:75660026-75660045 | Msa1077110:CDS | 35.0% |
| GTACATCCAAAATACAGTAC+CGG | + | chr7_2:75660202-75660221 | None:intergenic | 35.0% | |
| ! | ATTTTGGATGTACAATGACC+AGG | - | chr7_2:75660209-75660228 | Msa1077110:CDS | 35.0% |
| !!! | GCATCTCATCAAGTTGATTT+TGG | + | chr7_2:75660278-75660297 | None:intergenic | 35.0% |
| AGGGAACAACAAGAAAATGA+AGG | - | chr7_2:75660516-75660535 | Msa1077110:CDS | 35.0% | |
| GAACAACAAGAAAATGAAGG+AGG | - | chr7_2:75660519-75660538 | Msa1077110:CDS | 35.0% | |
| TAGTTGAAAAACTTCAAGGC+AGG | - | chr7_2:75660604-75660623 | Msa1077110:CDS | 35.0% | |
| AGATGAAGATGAAGATGAAG+AGG | - | chr7_2:75660731-75660750 | Msa1077110:CDS | 35.0% | |
| ATCATCAGAAAAGCAGAAGA+GGG | - | chr7_2:75660772-75660791 | Msa1077110:intron | 35.0% | |
| !! | TTTTGATTCTACCAGCTTGT+GGG | + | chr7_2:75660929-75660948 | None:intergenic | 35.0% |
| TTTGCATTGAGATTGTAGTG+AGG | + | chr7_2:75661144-75661163 | None:intergenic | 35.0% | |
| ! | AGCTGACACTCATTTTGTTG+AGG | + | chr7_2:75659704-75659723 | None:intergenic | 40.0% |
| CTATACGGTTATCAGGTTCA+AGG | + | chr7_2:75659742-75659761 | None:intergenic | 40.0% | |
| TCTGACTCTATACGGTTATC+AGG | + | chr7_2:75659749-75659768 | None:intergenic | 40.0% | |
| GATAACCGTATAGAGTCAGA+AGG | - | chr7_2:75659749-75659768 | Msa1077110:CDS | 40.0% | |
| AAGGTGGCATTATTGAGACT+TGG | - | chr7_2:75659768-75659787 | Msa1077110:CDS | 40.0% | |
| AACAGACAATTCAGATGTGC+AGG | - | chr7_2:75659800-75659819 | Msa1077110:CDS | 40.0% | |
| ! | TTGAAGAGTACAACGAGAGA+GGG | + | chr7_2:75659831-75659850 | None:intergenic | 40.0% |
| ACTATACCCATTACAGGTAG+TGG | - | chr7_2:75660003-75660022 | Msa1077110:CDS | 40.0% | |
| !!! | AGGTAGTGGATATTTTGGCA+TGG | - | chr7_2:75660017-75660036 | Msa1077110:CDS | 40.0% |
| !!! | TATTTTGGCATGGTATTCCC+GGG | - | chr7_2:75660027-75660046 | Msa1077110:CDS | 40.0% |
| TCTCTTTGTTCAGATTCCTG+TGG | + | chr7_2:75660075-75660094 | None:intergenic | 40.0% | |
| ! | TTCCTACCGGTACTGTATTT+TGG | - | chr7_2:75660193-75660212 | Msa1077110:CDS | 40.0% |
| !! | ATCCAAAATACAGTACCGGT+AGG | + | chr7_2:75660198-75660217 | None:intergenic | 40.0% |
| ATAAGAGAAACGGCAATGAC+TGG | + | chr7_2:75660240-75660259 | None:intergenic | 40.0% | |
| GCCAGTGTCAATAAGAGAAA+CGG | + | chr7_2:75660250-75660269 | None:intergenic | 40.0% | |
| ATCAACTTGATGAGATGCCT+AGG | - | chr7_2:75660280-75660299 | Msa1077110:CDS | 40.0% | |
| TCAACTTGATGAGATGCCTA+GGG | - | chr7_2:75660281-75660300 | Msa1077110:CDS | 40.0% | |
| TGACAGAGATTCTATCTTGC+TGG | - | chr7_2:75660423-75660442 | Msa1077110:CDS | 40.0% | |
| GACAGAGATTCTATCTTGCT+GGG | - | chr7_2:75660424-75660443 | Msa1077110:CDS | 40.0% | |
| TATCAGCAACAACAAGTGAG+AGG | - | chr7_2:75660471-75660490 | Msa1077110:CDS | 40.0% | |
| ! | ACATTTTCAGTGGCTTCAAG+AGG | - | chr7_2:75660544-75660563 | Msa1077110:CDS | 40.0% |
| ! | CATTTTCAGTGGCTTCAAGA+GGG | - | chr7_2:75660545-75660564 | Msa1077110:CDS | 40.0% |
| AAGATGCATTGAACGTGAAC+AGG | - | chr7_2:75660577-75660596 | Msa1077110:CDS | 40.0% | |
| AGATGCATTGAACGTGAACA+GGG | - | chr7_2:75660578-75660597 | Msa1077110:CDS | 40.0% | |
| TCTTCTTCATCTTGTCTGCT+GGG | + | chr7_2:75660714-75660733 | None:intergenic | 40.0% | |
| ATCTTCTTCATCTTGTCTGC+TGG | + | chr7_2:75660715-75660734 | None:intergenic | 40.0% | |
| !! | CTTCTGCTTTTCTGATGATG+TGG | + | chr7_2:75660771-75660790 | None:intergenic | 40.0% |
| CATCATCAGAAAAGCAGAAG+AGG | - | chr7_2:75660771-75660790 | Msa1077110:intron | 40.0% | |
| TCATCAGAAAAGCAGAAGAG+GGG | - | chr7_2:75660773-75660792 | Msa1077110:intron | 40.0% | |
| !!! | CTCTTTCACATTTTTGGCCT+CGG | + | chr7_2:75660821-75660840 | None:intergenic | 40.0% |
| TGTGAAAGAGAAAGACGCAA+CGG | - | chr7_2:75660831-75660850 | Msa1077110:intron | 40.0% | |
| !!! | GTTTTGATTCTACCAGCTTG+TGG | + | chr7_2:75660930-75660949 | None:intergenic | 40.0% |
| CTACAAGTAGTGAACTGCAA+TGG | - | chr7_2:75661198-75661217 | Msa1077110:intron | 40.0% | |
| AGCAATGGCAGCATTATCAT+TGG | + | chr7_2:75661337-75661356 | None:intergenic | 40.0% | |
| ! | ATGATAATGCTGCCATTGCT+AGG | - | chr7_2:75661337-75661356 | Msa1077110:CDS | 40.0% |
| ATTCAACATGGACAGGAATG+AGG | - | chr7_2:75661416-75661435 | Msa1077110:CDS | 40.0% | |
| ! | AGCTGACACTCATTTTGTTG+AGG | + | chr7_2:75659704-75659723 | None:intergenic | 40.0% |
| CTATACGGTTATCAGGTTCA+AGG | + | chr7_2:75659742-75659761 | None:intergenic | 40.0% | |
| TCTGACTCTATACGGTTATC+AGG | + | chr7_2:75659749-75659768 | None:intergenic | 40.0% | |
| GATAACCGTATAGAGTCAGA+AGG | - | chr7_2:75659749-75659768 | Msa1077110:CDS | 40.0% | |
| AAGGTGGCATTATTGAGACT+TGG | - | chr7_2:75659768-75659787 | Msa1077110:CDS | 40.0% | |
| AACAGACAATTCAGATGTGC+AGG | - | chr7_2:75659800-75659819 | Msa1077110:CDS | 40.0% | |
| ! | TTGAAGAGTACAACGAGAGA+GGG | + | chr7_2:75659831-75659850 | None:intergenic | 40.0% |
| ACTATACCCATTACAGGTAG+TGG | - | chr7_2:75660003-75660022 | Msa1077110:CDS | 40.0% | |
| !!! | AGGTAGTGGATATTTTGGCA+TGG | - | chr7_2:75660017-75660036 | Msa1077110:CDS | 40.0% |
| !!! | TATTTTGGCATGGTATTCCC+GGG | - | chr7_2:75660027-75660046 | Msa1077110:CDS | 40.0% |
| TCTCTTTGTTCAGATTCCTG+TGG | + | chr7_2:75660075-75660094 | None:intergenic | 40.0% | |
| ! | TTCCTACCGGTACTGTATTT+TGG | - | chr7_2:75660193-75660212 | Msa1077110:CDS | 40.0% |
| !! | ATCCAAAATACAGTACCGGT+AGG | + | chr7_2:75660198-75660217 | None:intergenic | 40.0% |
| ATAAGAGAAACGGCAATGAC+TGG | + | chr7_2:75660240-75660259 | None:intergenic | 40.0% | |
| GCCAGTGTCAATAAGAGAAA+CGG | + | chr7_2:75660250-75660269 | None:intergenic | 40.0% | |
| ATCAACTTGATGAGATGCCT+AGG | - | chr7_2:75660280-75660299 | Msa1077110:CDS | 40.0% | |
| TCAACTTGATGAGATGCCTA+GGG | - | chr7_2:75660281-75660300 | Msa1077110:CDS | 40.0% | |
| TGACAGAGATTCTATCTTGC+TGG | - | chr7_2:75660423-75660442 | Msa1077110:CDS | 40.0% | |
| GACAGAGATTCTATCTTGCT+GGG | - | chr7_2:75660424-75660443 | Msa1077110:CDS | 40.0% | |
| TATCAGCAACAACAAGTGAG+AGG | - | chr7_2:75660471-75660490 | Msa1077110:CDS | 40.0% | |
| ! | ACATTTTCAGTGGCTTCAAG+AGG | - | chr7_2:75660544-75660563 | Msa1077110:CDS | 40.0% |
| ! | CATTTTCAGTGGCTTCAAGA+GGG | - | chr7_2:75660545-75660564 | Msa1077110:CDS | 40.0% |
| AAGATGCATTGAACGTGAAC+AGG | - | chr7_2:75660577-75660596 | Msa1077110:CDS | 40.0% | |
| AGATGCATTGAACGTGAACA+GGG | - | chr7_2:75660578-75660597 | Msa1077110:CDS | 40.0% | |
| TCTTCTTCATCTTGTCTGCT+GGG | + | chr7_2:75660714-75660733 | None:intergenic | 40.0% | |
| ATCTTCTTCATCTTGTCTGC+TGG | + | chr7_2:75660715-75660734 | None:intergenic | 40.0% | |
| !! | CTTCTGCTTTTCTGATGATG+TGG | + | chr7_2:75660771-75660790 | None:intergenic | 40.0% |
| CATCATCAGAAAAGCAGAAG+AGG | - | chr7_2:75660771-75660790 | Msa1077110:intron | 40.0% | |
| TCATCAGAAAAGCAGAAGAG+GGG | - | chr7_2:75660773-75660792 | Msa1077110:intron | 40.0% | |
| !!! | CTCTTTCACATTTTTGGCCT+CGG | + | chr7_2:75660821-75660840 | None:intergenic | 40.0% |
| TGTGAAAGAGAAAGACGCAA+CGG | - | chr7_2:75660831-75660850 | Msa1077110:intron | 40.0% | |
| !!! | GTTTTGATTCTACCAGCTTG+TGG | + | chr7_2:75660930-75660949 | None:intergenic | 40.0% |
| CTACAAGTAGTGAACTGCAA+TGG | - | chr7_2:75661198-75661217 | Msa1077110:intron | 40.0% | |
| AGCAATGGCAGCATTATCAT+TGG | + | chr7_2:75661337-75661356 | None:intergenic | 40.0% | |
| ! | ATGATAATGCTGCCATTGCT+AGG | - | chr7_2:75661337-75661356 | Msa1077110:CDS | 40.0% |
| ATTCAACATGGACAGGAATG+AGG | - | chr7_2:75661416-75661435 | Msa1077110:CDS | 40.0% | |
| AACCGTATAGAGTCAGAAGG+TGG | - | chr7_2:75659752-75659771 | Msa1077110:CDS | 45.0% | |
| TGCCACCTTCTGACTCTATA+CGG | + | chr7_2:75659757-75659776 | None:intergenic | 45.0% | |
| ! | GTTGAAGAGTACAACGAGAG+AGG | + | chr7_2:75659832-75659851 | None:intergenic | 45.0% |
| CATTGGAGTAGAATGGTCTG+CGG | + | chr7_2:75659865-75659884 | None:intergenic | 45.0% | |
| !! | TGAGGAGCATTGGAGTAGAA+TGG | + | chr7_2:75659872-75659891 | None:intergenic | 45.0% |
| CTGAACAAAGAGAGAGTCGA+AGG | - | chr7_2:75660082-75660101 | Msa1077110:intron | 45.0% | |
| AAAGAGAGAGTCGAAGGTTC+AGG | - | chr7_2:75660088-75660107 | Msa1077110:intron | 45.0% | |
| AAGAGAGAGTCGAAGGTTCA+GGG | - | chr7_2:75660089-75660108 | Msa1077110:intron | 45.0% | |
| AGGTTCAGGGAATCTGAACA+AGG | - | chr7_2:75660102-75660121 | Msa1077110:intron | 45.0% | |
| AGGGAATCTGAACAAGGAGA+AGG | - | chr7_2:75660108-75660127 | Msa1077110:intron | 45.0% | |
| GTTCAGAGACAGTCACCAAA+AGG | - | chr7_2:75660137-75660156 | Msa1077110:intron | 45.0% | |
| !!! | CTCTGAAGCGGTTAACCTTT+TGG | + | chr7_2:75660155-75660174 | None:intergenic | 45.0% |
| AAAGGTTAACCGCTTCAGAG+AGG | - | chr7_2:75660155-75660174 | Msa1077110:intron | 45.0% | |
| AAGGTTAACCGCTTCAGAGA+GGG | - | chr7_2:75660156-75660175 | Msa1077110:intron | 45.0% | |
| GATCTCATTGCAGTTCCTAC+CGG | - | chr7_2:75660180-75660199 | Msa1077110:CDS | 45.0% | |
| GCCGTTTCTCTTATTGACAC+TGG | - | chr7_2:75660246-75660265 | Msa1077110:CDS | 45.0% | |
| AGCAACAACAAGTGAGAGGA+AGG | - | chr7_2:75660475-75660494 | Msa1077110:CDS | 45.0% | |
| GCAACAACAAGTGAGAGGAA+GGG | - | chr7_2:75660476-75660495 | Msa1077110:CDS | 45.0% | |
| CAACAACAAGTGAGAGGAAG+GGG | - | chr7_2:75660477-75660496 | Msa1077110:CDS | 45.0% | |
| ! | GAAGGAGGCAACATTTTCAG+TGG | - | chr7_2:75660534-75660553 | Msa1077110:CDS | 45.0% |
| TGGCTTCAAGAGGGATTTCT+TGG | - | chr7_2:75660554-75660573 | Msa1077110:CDS | 45.0% | |
| TCCTCCTTCCACTTTGACAA+TGG | + | chr7_2:75660652-75660671 | None:intergenic | 45.0% | |
| CTTCTTCATCTTGTCTGCTG+GGG | + | chr7_2:75660713-75660732 | None:intergenic | 45.0% | |
| ATGAAGATGAAGAGGACGAG+TGG | - | chr7_2:75660739-75660758 | Msa1077110:intron | 45.0% | |
| !!! | TTTCACATTTTTGGCCTCGG+CGG | + | chr7_2:75660818-75660837 | None:intergenic | 45.0% |
| CAGAAACAATTTGCACTGCC+AGG | - | chr7_2:75660859-75660878 | Msa1077110:intron | 45.0% | |
| ATGAAGATGAGGCCATGTTC+TGG | + | chr7_2:75660890-75660909 | None:intergenic | 45.0% | |
| GATGTCAGGTGATGAAGATG+AGG | + | chr7_2:75660901-75660920 | None:intergenic | 45.0% | |
| ! | TAGCATTGAATGGACGTGCA+AGG | - | chr7_2:75661175-75661194 | Msa1077110:intron | 45.0% |
| ! | GCTGCAACAGCAAAGTTTTG+TGG | + | chr7_2:75661273-75661292 | None:intergenic | 45.0% |
| GGACACAATCCACTCTAAGT+GGG | - | chr7_2:75661367-75661386 | Msa1077110:CDS | 45.0% | |
| GCTTGCAGCTACATTCAACA+TGG | - | chr7_2:75661404-75661423 | Msa1077110:CDS | 45.0% | |
| CAGCTACATTCAACATGGAC+AGG | - | chr7_2:75661409-75661428 | Msa1077110:CDS | 45.0% | |
| AACCGTATAGAGTCAGAAGG+TGG | - | chr7_2:75659752-75659771 | Msa1077110:CDS | 45.0% | |
| TGCCACCTTCTGACTCTATA+CGG | + | chr7_2:75659757-75659776 | None:intergenic | 45.0% | |
| ! | GTTGAAGAGTACAACGAGAG+AGG | + | chr7_2:75659832-75659851 | None:intergenic | 45.0% |
| CATTGGAGTAGAATGGTCTG+CGG | + | chr7_2:75659865-75659884 | None:intergenic | 45.0% | |
| !! | TGAGGAGCATTGGAGTAGAA+TGG | + | chr7_2:75659872-75659891 | None:intergenic | 45.0% |
| CTGAACAAAGAGAGAGTCGA+AGG | - | chr7_2:75660082-75660101 | Msa1077110:intron | 45.0% | |
| AAAGAGAGAGTCGAAGGTTC+AGG | - | chr7_2:75660088-75660107 | Msa1077110:intron | 45.0% | |
| AAGAGAGAGTCGAAGGTTCA+GGG | - | chr7_2:75660089-75660108 | Msa1077110:intron | 45.0% | |
| AGGTTCAGGGAATCTGAACA+AGG | - | chr7_2:75660102-75660121 | Msa1077110:intron | 45.0% | |
| AGGGAATCTGAACAAGGAGA+AGG | - | chr7_2:75660108-75660127 | Msa1077110:intron | 45.0% | |
| GTTCAGAGACAGTCACCAAA+AGG | - | chr7_2:75660137-75660156 | Msa1077110:intron | 45.0% | |
| !!! | CTCTGAAGCGGTTAACCTTT+TGG | + | chr7_2:75660155-75660174 | None:intergenic | 45.0% |
| AAAGGTTAACCGCTTCAGAG+AGG | - | chr7_2:75660155-75660174 | Msa1077110:intron | 45.0% | |
| AAGGTTAACCGCTTCAGAGA+GGG | - | chr7_2:75660156-75660175 | Msa1077110:intron | 45.0% | |
| GATCTCATTGCAGTTCCTAC+CGG | - | chr7_2:75660180-75660199 | Msa1077110:CDS | 45.0% | |
| GCCGTTTCTCTTATTGACAC+TGG | - | chr7_2:75660246-75660265 | Msa1077110:CDS | 45.0% | |
| AGCAACAACAAGTGAGAGGA+AGG | - | chr7_2:75660475-75660494 | Msa1077110:CDS | 45.0% | |
| GCAACAACAAGTGAGAGGAA+GGG | - | chr7_2:75660476-75660495 | Msa1077110:CDS | 45.0% | |
| CAACAACAAGTGAGAGGAAG+GGG | - | chr7_2:75660477-75660496 | Msa1077110:CDS | 45.0% | |
| ! | GAAGGAGGCAACATTTTCAG+TGG | - | chr7_2:75660534-75660553 | Msa1077110:CDS | 45.0% |
| TGGCTTCAAGAGGGATTTCT+TGG | - | chr7_2:75660554-75660573 | Msa1077110:CDS | 45.0% | |
| TCCTCCTTCCACTTTGACAA+TGG | + | chr7_2:75660652-75660671 | None:intergenic | 45.0% | |
| CTTCTTCATCTTGTCTGCTG+GGG | + | chr7_2:75660713-75660732 | None:intergenic | 45.0% | |
| ATGAAGATGAAGAGGACGAG+TGG | - | chr7_2:75660739-75660758 | Msa1077110:intron | 45.0% | |
| !!! | TTTCACATTTTTGGCCTCGG+CGG | + | chr7_2:75660818-75660837 | None:intergenic | 45.0% |
| CAGAAACAATTTGCACTGCC+AGG | - | chr7_2:75660859-75660878 | Msa1077110:intron | 45.0% | |
| ATGAAGATGAGGCCATGTTC+TGG | + | chr7_2:75660890-75660909 | None:intergenic | 45.0% | |
| GATGTCAGGTGATGAAGATG+AGG | + | chr7_2:75660901-75660920 | None:intergenic | 45.0% | |
| ! | TAGCATTGAATGGACGTGCA+AGG | - | chr7_2:75661175-75661194 | Msa1077110:intron | 45.0% |
| ! | GCTGCAACAGCAAAGTTTTG+TGG | + | chr7_2:75661273-75661292 | None:intergenic | 45.0% |
| GGACACAATCCACTCTAAGT+GGG | - | chr7_2:75661367-75661386 | Msa1077110:CDS | 45.0% | |
| GCTTGCAGCTACATTCAACA+TGG | - | chr7_2:75661404-75661423 | Msa1077110:CDS | 45.0% | |
| CAGCTACATTCAACATGGAC+AGG | - | chr7_2:75661409-75661428 | Msa1077110:CDS | 45.0% | |
| TCAAAGGTCTCAGGACAACC+CGG | + | chr7_2:75660048-75660067 | None:intergenic | 50.0% | |
| AGATTCCTGTGGCTCCTCAA+AGG | + | chr7_2:75660064-75660083 | None:intergenic | 50.0% | |
| CTGAACAAGGAGAAGGACGT+AGG | - | chr7_2:75660115-75660134 | Msa1077110:intron | 50.0% | |
| ! | TGAGATCACCCTCTCTGAAG+CGG | + | chr7_2:75660167-75660186 | None:intergenic | 50.0% |
| TTATGCTCAGTGCTCACCCT+AGG | + | chr7_2:75660300-75660319 | None:intergenic | 50.0% | |
| TGAGAGGAAGGGGAGAACAA+AGG | - | chr7_2:75660487-75660506 | Msa1077110:CDS | 50.0% | |
| AGGAAGGGGAGAACAAAGGA+GGG | - | chr7_2:75660491-75660510 | Msa1077110:CDS | 50.0% | |
| AGGAACGAAGACGAGGAGAA+GGG | - | chr7_2:75660624-75660643 | Msa1077110:CDS | 50.0% | |
| GAAGGGAGCCATTGTCAAAG+TGG | - | chr7_2:75660641-75660660 | Msa1077110:CDS | 50.0% | |
| GGAGCCATTGTCAAAGTGGA+AGG | - | chr7_2:75660645-75660664 | Msa1077110:CDS | 50.0% | |
| GCCATTGTCAAAGTGGAAGG+AGG | - | chr7_2:75660648-75660667 | Msa1077110:CDS | 50.0% | |
| AAGATGAAGAGGACGAGTGG+AGG | - | chr7_2:75660742-75660761 | Msa1077110:intron | 50.0% | |
| GAAAAGCAGAAGAGGGGAAG+AGG | - | chr7_2:75660779-75660798 | Msa1077110:intron | 50.0% | |
| ! | GCTTGTGGGTTGTAGATGTC+AGG | + | chr7_2:75660915-75660934 | None:intergenic | 50.0% |
| GACATCTACAACCCACAAGC+TGG | - | chr7_2:75660915-75660934 | Msa1077110:CDS | 50.0% | |
| ! | CTAAGACTCAGTGCTGAGCA+TGG | - | chr7_2:75660984-75661003 | Msa1077110:CDS | 50.0% |
| TGGCAACACTGTGTTCGATG+AGG | - | chr7_2:75661218-75661237 | Msa1077110:intron | 50.0% | |
| TTCGATGAGGAGCTAGAAGC+TGG | - | chr7_2:75661231-75661250 | Msa1077110:intron | 50.0% | |
| CAGCAAAATCAGTGAGCGAC+AGG | - | chr7_2:75661289-75661308 | Msa1077110:CDS | 50.0% | |
| GAGCGACAGGTTCACTTATG+TGG | - | chr7_2:75661302-75661321 | Msa1077110:CDS | 50.0% | |
| GGGACACAATCCACTCTAAG+TGG | - | chr7_2:75661366-75661385 | Msa1077110:CDS | 50.0% | |
| ACATGGACAGGAATGAGGCA+AGG | - | chr7_2:75661421-75661440 | Msa1077110:CDS | 50.0% | |
| TCAAAGGTCTCAGGACAACC+CGG | + | chr7_2:75660048-75660067 | None:intergenic | 50.0% | |
| AGATTCCTGTGGCTCCTCAA+AGG | + | chr7_2:75660064-75660083 | None:intergenic | 50.0% | |
| CTGAACAAGGAGAAGGACGT+AGG | - | chr7_2:75660115-75660134 | Msa1077110:intron | 50.0% | |
| ! | TGAGATCACCCTCTCTGAAG+CGG | + | chr7_2:75660167-75660186 | None:intergenic | 50.0% |
| TTATGCTCAGTGCTCACCCT+AGG | + | chr7_2:75660300-75660319 | None:intergenic | 50.0% | |
| TGAGAGGAAGGGGAGAACAA+AGG | - | chr7_2:75660487-75660506 | Msa1077110:CDS | 50.0% | |
| AGGAAGGGGAGAACAAAGGA+GGG | - | chr7_2:75660491-75660510 | Msa1077110:CDS | 50.0% | |
| AGGAACGAAGACGAGGAGAA+GGG | - | chr7_2:75660624-75660643 | Msa1077110:CDS | 50.0% | |
| GAAGGGAGCCATTGTCAAAG+TGG | - | chr7_2:75660641-75660660 | Msa1077110:CDS | 50.0% | |
| GGAGCCATTGTCAAAGTGGA+AGG | - | chr7_2:75660645-75660664 | Msa1077110:CDS | 50.0% | |
| GCCATTGTCAAAGTGGAAGG+AGG | - | chr7_2:75660648-75660667 | Msa1077110:CDS | 50.0% | |
| AAGATGAAGAGGACGAGTGG+AGG | - | chr7_2:75660742-75660761 | Msa1077110:intron | 50.0% | |
| GAAAAGCAGAAGAGGGGAAG+AGG | - | chr7_2:75660779-75660798 | Msa1077110:intron | 50.0% | |
| ! | GCTTGTGGGTTGTAGATGTC+AGG | + | chr7_2:75660915-75660934 | None:intergenic | 50.0% |
| GACATCTACAACCCACAAGC+TGG | - | chr7_2:75660915-75660934 | Msa1077110:CDS | 50.0% | |
| ! | CTAAGACTCAGTGCTGAGCA+TGG | - | chr7_2:75660984-75661003 | Msa1077110:CDS | 50.0% |
| TGGCAACACTGTGTTCGATG+AGG | - | chr7_2:75661218-75661237 | Msa1077110:intron | 50.0% | |
| TTCGATGAGGAGCTAGAAGC+TGG | - | chr7_2:75661231-75661250 | Msa1077110:intron | 50.0% | |
| CAGCAAAATCAGTGAGCGAC+AGG | - | chr7_2:75661289-75661308 | Msa1077110:CDS | 50.0% | |
| GAGCGACAGGTTCACTTATG+TGG | - | chr7_2:75661302-75661321 | Msa1077110:CDS | 50.0% | |
| GGGACACAATCCACTCTAAG+TGG | - | chr7_2:75661366-75661385 | Msa1077110:CDS | 50.0% | |
| ACATGGACAGGAATGAGGCA+AGG | - | chr7_2:75661421-75661440 | Msa1077110:CDS | 50.0% | |
| !!! | GGCTGCTGCTGCTTTTGATG+AGG | + | chr7_2:75659683-75659702 | None:intergenic | 55.0% |
| CAAAGGTCTCAGGACAACCC+GGG | + | chr7_2:75660047-75660066 | None:intergenic | 55.0% | |
| GGGTTGTCCTGAGACCTTTG+AGG | - | chr7_2:75660047-75660066 | Msa1077110:intron | 55.0% | |
| TGTGGCTCCTCAAAGGTCTC+AGG | + | chr7_2:75660057-75660076 | None:intergenic | 55.0% | |
| ! | TGAGACCTTTGAGGAGCCAC+AGG | - | chr7_2:75660056-75660075 | Msa1077110:intron | 55.0% |
| GAGGAAGGGGAGAACAAAGG+AGG | - | chr7_2:75660490-75660509 | Msa1077110:CDS | 55.0% | |
| GGAAGGGGAGAACAAAGGAG+GGG | - | chr7_2:75660492-75660511 | Msa1077110:CDS | 55.0% | |
| GGGAGAACAAAGGAGGGGAA+GGG | - | chr7_2:75660497-75660516 | Msa1077110:CDS | 55.0% | |
| TCAAGGCAGGAACGAAGACG+AGG | - | chr7_2:75660617-75660636 | Msa1077110:CDS | 55.0% | |
| CAGGAACGAAGACGAGGAGA+AGG | - | chr7_2:75660623-75660642 | Msa1077110:CDS | 55.0% | |
| GGCGTTGTTGTCTCTCTGGA+GGG | + | chr7_2:75660689-75660708 | None:intergenic | 55.0% | |
| TGGCGTTGTTGTCTCTCTGG+AGG | + | chr7_2:75660690-75660709 | None:intergenic | 55.0% | |
| CTTCATCTTGTCTGCTGGGG+TGG | + | chr7_2:75660710-75660729 | None:intergenic | 55.0% | |
| ATGAAGAGGACGAGTGGAGG+CGG | - | chr7_2:75660745-75660764 | Msa1077110:intron | 55.0% | |
| TGCCAGGCTTCACCAGAACA+TGG | - | chr7_2:75660875-75660894 | Msa1077110:intron | 55.0% | |
| GTCTTAGCCACCTGAGAGCT+GGG | + | chr7_2:75660971-75660990 | None:intergenic | 55.0% | |
| AGTCTTAGCCACCTGAGAGC+TGG | + | chr7_2:75660972-75660991 | None:intergenic | 55.0% | |
| CTGCCATTGCTAGGCTTGCA+GGG | - | chr7_2:75661346-75661365 | Msa1077110:CDS | 55.0% | |
| TGTCCCTGCAAGCCTAGCAA+TGG | + | chr7_2:75661352-75661371 | None:intergenic | 55.0% | |
| CACTGGCATCCCACTTAGAG+TGG | + | chr7_2:75661379-75661398 | None:intergenic | 55.0% | |
| CACTCTAAGTGGGATGCCAG+TGG | - | chr7_2:75661377-75661396 | Msa1077110:CDS | 55.0% | |
| GTAGCTGCAAGCACATCCAC+TGG | + | chr7_2:75661396-75661415 | None:intergenic | 55.0% | |
| !!! | GGCTGCTGCTGCTTTTGATG+AGG | + | chr7_2:75659683-75659702 | None:intergenic | 55.0% |
| CAAAGGTCTCAGGACAACCC+GGG | + | chr7_2:75660047-75660066 | None:intergenic | 55.0% | |
| GGGTTGTCCTGAGACCTTTG+AGG | - | chr7_2:75660047-75660066 | Msa1077110:intron | 55.0% | |
| TGTGGCTCCTCAAAGGTCTC+AGG | + | chr7_2:75660057-75660076 | None:intergenic | 55.0% | |
| ! | TGAGACCTTTGAGGAGCCAC+AGG | - | chr7_2:75660056-75660075 | Msa1077110:intron | 55.0% |
| GAGGAAGGGGAGAACAAAGG+AGG | - | chr7_2:75660490-75660509 | Msa1077110:CDS | 55.0% | |
| GGAAGGGGAGAACAAAGGAG+GGG | - | chr7_2:75660492-75660511 | Msa1077110:CDS | 55.0% | |
| GGGAGAACAAAGGAGGGGAA+GGG | - | chr7_2:75660497-75660516 | Msa1077110:CDS | 55.0% | |
| TCAAGGCAGGAACGAAGACG+AGG | - | chr7_2:75660617-75660636 | Msa1077110:CDS | 55.0% | |
| CAGGAACGAAGACGAGGAGA+AGG | - | chr7_2:75660623-75660642 | Msa1077110:CDS | 55.0% | |
| GGCGTTGTTGTCTCTCTGGA+GGG | + | chr7_2:75660689-75660708 | None:intergenic | 55.0% | |
| TGGCGTTGTTGTCTCTCTGG+AGG | + | chr7_2:75660690-75660709 | None:intergenic | 55.0% | |
| CTTCATCTTGTCTGCTGGGG+TGG | + | chr7_2:75660710-75660729 | None:intergenic | 55.0% | |
| ATGAAGAGGACGAGTGGAGG+CGG | - | chr7_2:75660745-75660764 | Msa1077110:intron | 55.0% | |
| TGCCAGGCTTCACCAGAACA+TGG | - | chr7_2:75660875-75660894 | Msa1077110:intron | 55.0% | |
| GTCTTAGCCACCTGAGAGCT+GGG | + | chr7_2:75660971-75660990 | None:intergenic | 55.0% | |
| AGTCTTAGCCACCTGAGAGC+TGG | + | chr7_2:75660972-75660991 | None:intergenic | 55.0% | |
| CTGCCATTGCTAGGCTTGCA+GGG | - | chr7_2:75661346-75661365 | Msa1077110:CDS | 55.0% | |
| TGTCCCTGCAAGCCTAGCAA+TGG | + | chr7_2:75661352-75661371 | None:intergenic | 55.0% | |
| CACTGGCATCCCACTTAGAG+TGG | + | chr7_2:75661379-75661398 | None:intergenic | 55.0% | |
| CACTCTAAGTGGGATGCCAG+TGG | - | chr7_2:75661377-75661396 | Msa1077110:CDS | 55.0% | |
| GTAGCTGCAAGCACATCCAC+TGG | + | chr7_2:75661396-75661415 | None:intergenic | 55.0% | |
| ! | CGGCAATGACTGGAGTGTCC+TGG | + | chr7_2:75660230-75660249 | None:intergenic | 60.0% |
| GGGGAGAACAAAGGAGGGGA+AGG | - | chr7_2:75660496-75660515 | Msa1077110:CDS | 60.0% | |
| GGGTGGCGTTGTTGTCTCTC+TGG | + | chr7_2:75660693-75660712 | None:intergenic | 60.0% | |
| !!! | ATTTTTGGCCTCGGCGGCAG+GGG | + | chr7_2:75660812-75660831 | None:intergenic | 60.0% |
| !!! | CATTTTTGGCCTCGGCGGCA+GGG | + | chr7_2:75660813-75660832 | None:intergenic | 60.0% |
| !!! | ACATTTTTGGCCTCGGCGGC+AGG | + | chr7_2:75660814-75660833 | None:intergenic | 60.0% |
| GGCCATGTTCTGGTGAAGCC+TGG | + | chr7_2:75660880-75660899 | None:intergenic | 60.0% | |
| GAGAGCTGGGAGGTCAAAGC+TGG | + | chr7_2:75660958-75660977 | None:intergenic | 60.0% | |
| GCTTTGACCTCCCAGCTCTC+AGG | - | chr7_2:75660958-75660977 | Msa1077110:intron | 60.0% | |
| TTGACCTCCCAGCTCTCAGG+TGG | - | chr7_2:75660961-75660980 | Msa1077110:intron | 60.0% | |
| TTAGCCACCTGAGAGCTGGG+AGG | + | chr7_2:75660968-75660987 | None:intergenic | 60.0% | |
| GCTGCCATTGCTAGGCTTGC+AGG | - | chr7_2:75661345-75661364 | Msa1077110:CDS | 60.0% | |
| AGCTCTGCGTTCGGACTCAC+GGG | + | chr7_2:75661487-75661506 | None:intergenic | 60.0% | |
| CAGCTCTGCGTTCGGACTCA+CGG | + | chr7_2:75661488-75661507 | None:intergenic | 60.0% | |
| ! | CGGCAATGACTGGAGTGTCC+TGG | + | chr7_2:75660230-75660249 | None:intergenic | 60.0% |
| GGGGAGAACAAAGGAGGGGA+AGG | - | chr7_2:75660496-75660515 | Msa1077110:CDS | 60.0% | |
| GGGTGGCGTTGTTGTCTCTC+TGG | + | chr7_2:75660693-75660712 | None:intergenic | 60.0% | |
| !!! | ATTTTTGGCCTCGGCGGCAG+GGG | + | chr7_2:75660812-75660831 | None:intergenic | 60.0% |
| !!! | CATTTTTGGCCTCGGCGGCA+GGG | + | chr7_2:75660813-75660832 | None:intergenic | 60.0% |
| !!! | ACATTTTTGGCCTCGGCGGC+AGG | + | chr7_2:75660814-75660833 | None:intergenic | 60.0% |
| GGCCATGTTCTGGTGAAGCC+TGG | + | chr7_2:75660880-75660899 | None:intergenic | 60.0% | |
| GAGAGCTGGGAGGTCAAAGC+TGG | + | chr7_2:75660958-75660977 | None:intergenic | 60.0% | |
| GCTTTGACCTCCCAGCTCTC+AGG | - | chr7_2:75660958-75660977 | Msa1077110:intron | 60.0% | |
| TTGACCTCCCAGCTCTCAGG+TGG | - | chr7_2:75660961-75660980 | Msa1077110:intron | 60.0% | |
| TTAGCCACCTGAGAGCTGGG+AGG | + | chr7_2:75660968-75660987 | None:intergenic | 60.0% | |
| GCTGCCATTGCTAGGCTTGC+AGG | - | chr7_2:75661345-75661364 | Msa1077110:CDS | 60.0% | |
| AGCTCTGCGTTCGGACTCAC+GGG | + | chr7_2:75661487-75661506 | None:intergenic | 60.0% | |
| CAGCTCTGCGTTCGGACTCA+CGG | + | chr7_2:75661488-75661507 | None:intergenic | 60.0% | |
| GCTCTGCGTTCGGACTCACG+GGG | + | chr7_2:75661486-75661505 | None:intergenic | 65.0% | |
| GCTCTGCGTTCGGACTCACG+GGG | + | chr7_2:75661486-75661505 | None:intergenic | 65.0% | |
| CTGCGTTCGGACTCACGGGG+TGG | + | chr7_2:75661483-75661502 | None:intergenic | 70.0% | |
| CTGCGTTCGGACTCACGGGG+TGG | + | chr7_2:75661483-75661502 | None:intergenic | 70.0% | |
| !!! | GAAGAGCGCCCCTGCCGCCG+AGG | - | chr7_2:75660801-75660820 | Msa1077110:intron | 80.0% |
| !!! | GAAGAGCGCCCCTGCCGCCG+AGG | - | chr7_2:75660801-75660820 | Msa1077110:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 75659671 | 75661512 | 75659671 | ID=Msa1077110;Name=Msa1077110 |
| chr7_2 | mRNA | 75659671 | 75661512 | 75659671 | ID=Msa1077110-mRNA-1;Parent=Msa1077110;Name=Msa1077110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|0.6|5|0|493 |
| chr7_2 | exon | 75661272 | 75661512 | 75661272 | ID=Msa1077110-mRNA-1:exon:18088;Parent=Msa1077110-mRNA-1 |
| chr7_2 | exon | 75660977 | 75661164 | 75660977 | ID=Msa1077110-mRNA-1:exon:18087;Parent=Msa1077110-mRNA-1 |
| chr7_2 | exon | 75660881 | 75660952 | 75660881 | ID=Msa1077110-mRNA-1:exon:18086;Parent=Msa1077110-mRNA-1 |
| chr7_2 | exon | 75660164 | 75660754 | 75660164 | ID=Msa1077110-mRNA-1:exon:18085;Parent=Msa1077110-mRNA-1 |
| chr7_2 | exon | 75659671 | 75660057 | 75659671 | ID=Msa1077110-mRNA-1:exon:18084;Parent=Msa1077110-mRNA-1 |
| chr7_2 | CDS | 75661272 | 75661512 | 75661272 | ID=Msa1077110-mRNA-1:cds;Parent=Msa1077110-mRNA-1 |
| chr7_2 | CDS | 75660977 | 75661164 | 75660977 | ID=Msa1077110-mRNA-1:cds;Parent=Msa1077110-mRNA-1 |
| chr7_2 | CDS | 75660881 | 75660952 | 75660881 | ID=Msa1077110-mRNA-1:cds;Parent=Msa1077110-mRNA-1 |
| chr7_2 | CDS | 75660164 | 75660754 | 75660164 | ID=Msa1077110-mRNA-1:cds;Parent=Msa1077110-mRNA-1 |
| chr7_2 | CDS | 75659671 | 75660057 | 75659671 | ID=Msa1077110-mRNA-1:cds;Parent=Msa1077110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
